Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057470.t1 | XP_024626124.1 | 74.8 | 595 | 24 | 4 | 1 | 470 | 203 | 796 | 3.10E-234 | 820.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057470.t1 | Q3E9B5 | 51.0 | 541 | 125 | 7 | 45 | 460 | 70 | 595 | 5.7e-136 | 485.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057470.t1 | G7L599 | 74.4 | 574 | 24 | 3 | 19 | 470 | 75 | 647 | 2.5e-225 | 790.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057470.t1 | MTR_7g013270 | 95.890 | 292 | 11 | 1 | 19 | 310 | 75 | 365 | 0.0 | 575 |
MS.gene057470.t1 | MTR_7g013270 | 73.869 | 199 | 16 | 1 | 308 | 470 | 449 | 647 | 1.50e-88 | 283 |
MS.gene057470.t1 | MTR_7g005930 | 87.781 | 311 | 34 | 2 | 1 | 310 | 1 | 308 | 0.0 | 550 |
MS.gene057470.t1 | MTR_7g005930 | 68.912 | 193 | 24 | 1 | 308 | 464 | 392 | 584 | 1.96e-79 | 258 |
MS.gene057470.t1 | MTR_1g116930 | 72.101 | 276 | 73 | 2 | 35 | 310 | 24 | 295 | 1.55e-138 | 410 |
MS.gene057470.t1 | MTR_1g116930 | 48.744 | 199 | 61 | 2 | 308 | 470 | 380 | 573 | 7.20e-55 | 193 |
MS.gene057470.t1 | MTR_7g010820 | 60.839 | 286 | 106 | 3 | 26 | 310 | 18 | 298 | 2.60e-112 | 343 |
MS.gene057470.t1 | MTR_7g010820 | 41.000 | 200 | 70 | 4 | 307 | 458 | 385 | 584 | 1.88e-30 | 124 |
MS.gene057470.t1 | MTR_4g098800 | 58.472 | 301 | 119 | 3 | 13 | 310 | 13 | 310 | 3.88e-110 | 338 |
MS.gene057470.t1 | MTR_4g098800 | 42.541 | 181 | 66 | 3 | 307 | 450 | 397 | 576 | 6.27e-37 | 143 |
MS.gene057470.t1 | MTR_4g098800 | 58.472 | 301 | 119 | 3 | 13 | 310 | 78 | 375 | 2.27e-109 | 338 |
MS.gene057470.t1 | MTR_4g098800 | 42.541 | 181 | 66 | 3 | 307 | 450 | 462 | 641 | 1.03e-36 | 143 |
MS.gene057470.t1 | MTR_5g014150 | 60.490 | 286 | 109 | 2 | 26 | 310 | 36 | 318 | 2.85e-106 | 328 |
MS.gene057470.t1 | MTR_5g014150 | 41.584 | 202 | 68 | 5 | 307 | 465 | 405 | 599 | 3.55e-37 | 144 |
MS.gene057470.t1 | MTR_7g067010 | 40.845 | 284 | 160 | 4 | 28 | 310 | 18 | 294 | 5.43e-65 | 219 |
MS.gene057470.t1 | MTR_7g067010 | 35.359 | 181 | 77 | 2 | 307 | 447 | 379 | 559 | 9.13e-28 | 116 |
MS.gene057470.t1 | MTR_3g462710 | 40.780 | 282 | 160 | 4 | 27 | 307 | 17 | 292 | 5.44e-63 | 214 |
MS.gene057470.t1 | MTR_3g462710 | 38.889 | 180 | 70 | 2 | 307 | 446 | 381 | 560 | 2.40e-32 | 130 |
MS.gene057470.t1 | MTR_3g112460 | 35.017 | 297 | 184 | 4 | 14 | 306 | 1 | 292 | 7.96e-61 | 208 |
MS.gene057470.t1 | MTR_3g112460 | 31.461 | 178 | 82 | 3 | 307 | 448 | 378 | 551 | 3.03e-22 | 100 |
MS.gene057470.t1 | MTR_1g042310 | 38.710 | 279 | 166 | 3 | 25 | 301 | 17 | 292 | 2.23e-59 | 205 |
MS.gene057470.t1 | MTR_4g015080 | 39.068 | 279 | 162 | 4 | 33 | 310 | 33 | 304 | 4.72e-59 | 204 |
MS.gene057470.t1 | MTR_4g015080 | 33.889 | 180 | 79 | 2 | 307 | 446 | 389 | 568 | 1.89e-26 | 112 |
MS.gene057470.t1 | MTR_7g098150 | 34.948 | 289 | 182 | 4 | 25 | 310 | 24 | 309 | 5.08e-59 | 202 |
MS.gene057470.t1 | MTR_7g098090 | 34.948 | 289 | 182 | 4 | 25 | 310 | 24 | 309 | 2.99e-58 | 202 |
MS.gene057470.t1 | MTR_3g112470 | 34.680 | 297 | 185 | 4 | 14 | 306 | 1 | 292 | 3.21e-58 | 201 |
MS.gene057470.t1 | MTR_3g112470 | 32.022 | 178 | 81 | 3 | 307 | 448 | 378 | 551 | 7.02e-23 | 102 |
MS.gene057470.t1 | MTR_7g098160 | 35.294 | 289 | 181 | 4 | 25 | 310 | 24 | 309 | 1.61e-57 | 200 |
MS.gene057470.t1 | MTR_7g098180 | 34.828 | 290 | 182 | 3 | 25 | 310 | 22 | 308 | 4.92e-57 | 199 |
MS.gene057470.t1 | MTR_7g098200 | 34.602 | 289 | 183 | 3 | 25 | 310 | 20 | 305 | 1.61e-56 | 197 |
MS.gene057470.t1 | MTR_1g041815 | 35.842 | 279 | 174 | 3 | 25 | 301 | 18 | 293 | 9.31e-56 | 195 |
MS.gene057470.t1 | MTR_1g042310 | 40.239 | 251 | 145 | 3 | 53 | 301 | 1 | 248 | 2.41e-55 | 193 |
MS.gene057470.t1 | MTR_1g042310 | 40.239 | 251 | 145 | 3 | 53 | 301 | 8 | 255 | 3.69e-55 | 193 |
MS.gene057470.t1 | MTR_7g098040 | 33.793 | 290 | 184 | 5 | 25 | 310 | 25 | 310 | 5.77e-55 | 194 |
MS.gene057470.t1 | MTR_7g098220 | 34.602 | 289 | 183 | 3 | 25 | 310 | 21 | 306 | 2.23e-54 | 192 |
MS.gene057470.t1 | MTR_1g041835 | 35.484 | 279 | 175 | 3 | 25 | 301 | 18 | 293 | 3.17e-54 | 191 |
MS.gene057470.t1 | MTR_1g041835 | 28.426 | 197 | 100 | 3 | 307 | 462 | 381 | 577 | 1.87e-12 | 69.7 |
MS.gene057470.t1 | MTR_7g098200 | 34.657 | 277 | 175 | 3 | 25 | 298 | 20 | 293 | 3.41e-54 | 191 |
MS.gene057470.t1 | MTR_3g112450 | 35.816 | 282 | 174 | 4 | 26 | 304 | 15 | 292 | 3.72e-53 | 188 |
MS.gene057470.t1 | MTR_3g112450 | 32.447 | 188 | 86 | 5 | 308 | 458 | 380 | 563 | 2.01e-22 | 100 |
MS.gene057470.t1 | MTR_1g075440 | 35.379 | 277 | 174 | 3 | 24 | 298 | 18 | 291 | 1.38e-52 | 187 |
MS.gene057470.t1 | MTR_1g075440 | 30.000 | 200 | 99 | 2 | 307 | 465 | 383 | 582 | 3.34e-20 | 94.0 |
MS.gene057470.t1 | MTR_3g072300 | 32.515 | 326 | 207 | 7 | 26 | 349 | 16 | 330 | 1.73e-52 | 186 |
MS.gene057470.t1 | MTR_3g072300 | 27.072 | 181 | 91 | 2 | 307 | 446 | 378 | 558 | 2.85e-15 | 78.6 |
MS.gene057470.t1 | MTR_7g098230 | 35.338 | 266 | 166 | 3 | 48 | 310 | 40 | 302 | 2.02e-52 | 186 |
MS.gene057470.t1 | MTR_4g024930 | 49.756 | 205 | 97 | 2 | 27 | 228 | 29 | 230 | 2.46e-52 | 186 |
MS.gene057470.t1 | MTR_4g024930 | 39.181 | 171 | 66 | 3 | 315 | 447 | 383 | 553 | 5.07e-28 | 117 |
MS.gene057470.t1 | MTR_1g041875 | 35.836 | 293 | 178 | 4 | 20 | 310 | 20 | 304 | 1.64e-51 | 184 |
MS.gene057470.t1 | MTR_7g098220 | 36.398 | 261 | 160 | 3 | 53 | 310 | 5 | 262 | 4.39e-51 | 182 |
MS.gene057470.t1 | MTR_4g019580 | 34.982 | 283 | 175 | 5 | 26 | 307 | 28 | 302 | 1.94e-50 | 181 |
MS.gene057470.t1 | MTR_4g019580 | 30.049 | 203 | 100 | 7 | 289 | 451 | 373 | 573 | 9.90e-16 | 80.1 |
MS.gene057470.t1 | MTR_1g041885 | 38.077 | 260 | 156 | 3 | 53 | 310 | 1 | 257 | 5.80e-50 | 178 |
MS.gene057470.t1 | MTR_7g065080 | 35.985 | 264 | 162 | 4 | 26 | 288 | 23 | 280 | 3.29e-49 | 177 |
MS.gene057470.t1 | MTR_4g033375 | 39.921 | 253 | 136 | 5 | 26 | 276 | 24 | 262 | 1.06e-48 | 174 |
MS.gene057470.t1 | MTR_4g033375 | 34.737 | 95 | 56 | 2 | 307 | 395 | 369 | 463 | 2.56e-11 | 66.2 |
MS.gene057470.t1 | MTR_4g033395 | 37.154 | 253 | 143 | 4 | 26 | 276 | 24 | 262 | 2.48e-48 | 173 |
MS.gene057470.t1 | MTR_5g012270 | 33.453 | 278 | 178 | 4 | 36 | 310 | 31 | 304 | 1.90e-46 | 170 |
MS.gene057470.t1 | MTR_5g012270 | 32.044 | 181 | 79 | 4 | 308 | 446 | 391 | 569 | 1.90e-20 | 94.7 |
MS.gene057470.t1 | MTR_3g069420 | 33.712 | 264 | 167 | 4 | 26 | 288 | 26 | 282 | 1.23e-45 | 167 |
MS.gene057470.t1 | MTR_3g069500 | 32.955 | 264 | 169 | 4 | 26 | 288 | 27 | 283 | 1.51e-43 | 162 |
MS.gene057470.t1 | MTR_5g055000 | 32.258 | 279 | 184 | 3 | 33 | 310 | 17 | 291 | 1.84e-43 | 161 |
MS.gene057470.t1 | MTR_4g033325 | 35.740 | 277 | 162 | 4 | 26 | 300 | 23 | 285 | 8.83e-43 | 159 |
MS.gene057470.t1 | MTR_4g033325 | 29.121 | 182 | 87 | 3 | 307 | 446 | 365 | 546 | 1.52e-17 | 85.5 |
MS.gene057470.t1 | MTR_4g033330 | 36.538 | 260 | 149 | 4 | 26 | 283 | 23 | 268 | 2.16e-42 | 157 |
MS.gene057470.t1 | MTR_4g033330 | 29.697 | 165 | 73 | 3 | 309 | 431 | 370 | 533 | 1.39e-13 | 73.2 |
MS.gene057470.t1 | MTR_5g012290 | 33.110 | 299 | 194 | 3 | 15 | 310 | 8 | 303 | 4.99e-42 | 157 |
MS.gene057470.t1 | MTR_3g014790 | 35.019 | 257 | 141 | 3 | 26 | 278 | 5 | 239 | 5.95e-42 | 157 |
MS.gene057470.t1 | MTR_0294s0020 | 37.945 | 253 | 141 | 4 | 26 | 276 | 23 | 261 | 7.15e-41 | 154 |
MS.gene057470.t1 | MTR_0294s0020 | 28.061 | 196 | 97 | 4 | 306 | 459 | 364 | 557 | 7.89e-20 | 92.8 |
MS.gene057470.t1 | MTR_4g033315 | 36.538 | 260 | 149 | 4 | 26 | 283 | 23 | 268 | 1.16e-40 | 153 |
MS.gene057470.t1 | MTR_4g033315 | 27.692 | 195 | 97 | 4 | 307 | 459 | 367 | 559 | 3.70e-17 | 84.3 |
MS.gene057470.t1 | MTR_4g033310 | 36.538 | 260 | 149 | 4 | 26 | 283 | 23 | 268 | 1.16e-40 | 153 |
MS.gene057470.t1 | MTR_4g033310 | 27.692 | 195 | 97 | 4 | 307 | 459 | 367 | 559 | 3.70e-17 | 84.3 |
MS.gene057470.t1 | MTR_7g006540 | 34.667 | 300 | 175 | 8 | 24 | 310 | 52 | 343 | 2.81e-40 | 153 |
MS.gene057470.t1 | MTR_4g101380 | 31.488 | 289 | 191 | 4 | 26 | 310 | 19 | 304 | 7.24e-40 | 151 |
MS.gene057470.t1 | MTR_4g101380 | 31.841 | 201 | 93 | 4 | 308 | 466 | 392 | 590 | 3.22e-17 | 84.7 |
MS.gene057470.t1 | MTR_3g069440 | 33.333 | 264 | 168 | 4 | 26 | 288 | 25 | 281 | 1.65e-39 | 150 |
MS.gene057470.t1 | MTR_4g107580 | 31.273 | 275 | 185 | 2 | 37 | 310 | 27 | 298 | 6.97e-39 | 149 |
MS.gene057470.t1 | MTR_3g005010 | 35.897 | 273 | 150 | 7 | 26 | 294 | 22 | 273 | 1.46e-38 | 147 |
MS.gene057470.t1 | MTR_3g005010 | 30.601 | 183 | 83 | 3 | 307 | 446 | 359 | 540 | 4.14e-19 | 90.5 |
MS.gene057470.t1 | MTR_8g087780 | 30.000 | 310 | 210 | 4 | 26 | 331 | 13 | 319 | 2.59e-38 | 147 |
MS.gene057470.t1 | MTR_5g038060 | 31.250 | 256 | 170 | 2 | 33 | 285 | 30 | 282 | 6.16e-38 | 146 |
MS.gene057470.t1 | MTR_7g088825 | 31.633 | 294 | 192 | 5 | 18 | 306 | 2 | 291 | 3.42e-37 | 144 |
MS.gene057470.t1 | MTR_8g087810 | 31.930 | 285 | 186 | 5 | 27 | 307 | 14 | 294 | 6.29e-37 | 143 |
MS.gene057470.t1 | MTR_8g469470 | 33.202 | 253 | 163 | 2 | 25 | 274 | 23 | 272 | 1.15e-36 | 142 |
MS.gene057470.t1 | MTR_2g017750 | 31.410 | 312 | 195 | 8 | 13 | 317 | 10 | 309 | 4.21e-36 | 141 |
MS.gene057470.t1 | MTR_7g088820 | 29.252 | 294 | 201 | 4 | 15 | 306 | 6 | 294 | 4.51e-36 | 141 |
MS.gene057470.t1 | MTR_8g469480 | 33.466 | 251 | 160 | 3 | 37 | 283 | 41 | 288 | 1.90e-35 | 139 |
MS.gene057470.t1 | MTR_3g100980 | 28.826 | 281 | 190 | 4 | 31 | 306 | 13 | 288 | 3.16e-35 | 138 |
MS.gene057470.t1 | MTR_4g114340 | 33.574 | 277 | 179 | 3 | 36 | 311 | 26 | 298 | 5.33e-35 | 137 |
MS.gene057470.t1 | MTR_4g123537 | 32.862 | 283 | 180 | 6 | 30 | 310 | 36 | 310 | 5.62e-35 | 138 |
MS.gene057470.t1 | MTR_4g123537 | 31.818 | 176 | 80 | 4 | 315 | 451 | 398 | 572 | 1.07e-20 | 95.5 |
MS.gene057470.t1 | MTR_1g026740 | 32.787 | 244 | 157 | 2 | 35 | 278 | 18 | 254 | 8.16e-35 | 137 |
MS.gene057470.t1 | MTR_3g462710 | 38.624 | 189 | 109 | 4 | 120 | 307 | 1 | 183 | 3.22e-34 | 134 |
MS.gene057470.t1 | MTR_3g462710 | 38.889 | 180 | 70 | 2 | 307 | 446 | 272 | 451 | 5.76e-33 | 130 |
MS.gene057470.t1 | MTR_2g005130 | 33.871 | 248 | 159 | 1 | 27 | 274 | 33 | 275 | 2.10e-33 | 133 |
MS.gene057470.t1 | MTR_2g005130 | 31.122 | 196 | 91 | 5 | 307 | 464 | 385 | 574 | 7.38e-18 | 86.7 |
MS.gene057470.t1 | MTR_4g107670 | 29.012 | 324 | 206 | 7 | 28 | 336 | 18 | 332 | 3.16e-33 | 132 |
MS.gene057470.t1 | MTR_7g088790 | 31.488 | 289 | 193 | 3 | 19 | 306 | 14 | 298 | 3.44e-33 | 132 |
MS.gene057470.t1 | MTR_8g038880 | 34.426 | 244 | 138 | 2 | 35 | 278 | 21 | 242 | 4.02e-33 | 132 |
MS.gene057470.t1 | MTR_1g009200 | 29.008 | 262 | 185 | 1 | 35 | 296 | 28 | 288 | 4.99e-33 | 132 |
MS.gene057470.t1 | MTR_5g038190 | 31.179 | 263 | 174 | 3 | 25 | 283 | 15 | 274 | 6.87e-33 | 131 |
MS.gene057470.t1 | MTR_4g107510 | 28.727 | 275 | 191 | 3 | 37 | 310 | 39 | 309 | 8.94e-33 | 131 |
MS.gene057470.t1 | MTR_1g085090 | 28.929 | 280 | 185 | 5 | 33 | 310 | 18 | 285 | 5.03e-32 | 129 |
MS.gene057470.t1 | MTR_1g085090 | 27.442 | 215 | 99 | 9 | 309 | 469 | 366 | 577 | 7.50e-13 | 71.2 |
MS.gene057470.t1 | MTR_8g469310 | 35.169 | 236 | 149 | 2 | 36 | 271 | 28 | 259 | 7.27e-32 | 129 |
MS.gene057470.t1 | MTR_7g065080 | 35.533 | 197 | 120 | 4 | 93 | 288 | 3 | 193 | 9.97e-32 | 127 |
MS.gene057470.t1 | MTR_4g107530 | 29.268 | 246 | 170 | 2 | 37 | 281 | 36 | 278 | 1.18e-31 | 128 |
MS.gene057470.t1 | MTR_1g026750 | 32.819 | 259 | 167 | 2 | 18 | 276 | 2 | 253 | 3.47e-31 | 126 |
MS.gene057470.t1 | MTR_2g093160 | 30.182 | 275 | 179 | 3 | 13 | 286 | 4 | 266 | 3.80e-31 | 126 |
MS.gene057470.t1 | MTR_7g098200 | 34.536 | 194 | 121 | 3 | 120 | 310 | 1 | 191 | 5.08e-31 | 125 |
MS.gene057470.t1 | MTR_4g107610 | 28.571 | 294 | 202 | 4 | 9 | 301 | 6 | 292 | 7.27e-31 | 126 |
MS.gene057470.t1 | MTR_5g038380 | 32.653 | 245 | 161 | 2 | 27 | 271 | 21 | 261 | 8.37e-31 | 125 |
MS.gene057470.t1 | MTR_7g111260 | 26.014 | 296 | 208 | 4 | 33 | 327 | 18 | 303 | 4.49e-30 | 123 |
MS.gene057470.t1 | MTR_3g100980 | 26.214 | 309 | 190 | 5 | 31 | 306 | 13 | 316 | 8.79e-30 | 122 |
MS.gene057470.t1 | MTR_1g026770 | 29.078 | 282 | 191 | 3 | 29 | 310 | 10 | 282 | 1.61e-29 | 122 |
MS.gene057470.t1 | MTR_7g088820 | 30.172 | 232 | 155 | 4 | 77 | 306 | 6 | 232 | 1.60e-28 | 118 |
MS.gene057470.t1 | MTR_7g064780 | 27.636 | 275 | 191 | 3 | 35 | 305 | 27 | 297 | 6.43e-28 | 117 |
MS.gene057470.t1 | MTR_2g093180 | 29.603 | 277 | 182 | 3 | 13 | 288 | 4 | 268 | 1.62e-27 | 115 |
MS.gene057470.t1 | MTR_7g051830 | 29.057 | 265 | 173 | 4 | 15 | 277 | 4 | 255 | 1.67e-26 | 112 |
MS.gene057470.t1 | MTR_4g033325 | 36.413 | 184 | 101 | 4 | 119 | 300 | 18 | 187 | 1.94e-26 | 111 |
MS.gene057470.t1 | MTR_4g033325 | 29.121 | 182 | 87 | 3 | 307 | 446 | 267 | 448 | 1.19e-17 | 85.5 |
MS.gene057470.t1 | MTR_2g093640 | 29.329 | 283 | 185 | 4 | 13 | 292 | 4 | 274 | 4.15e-26 | 111 |
MS.gene057470.t1 | MTR_2g101640 | 29.183 | 257 | 177 | 3 | 33 | 287 | 22 | 275 | 1.26e-25 | 110 |
MS.gene057470.t1 | MTR_7g064800 | 27.953 | 254 | 179 | 2 | 33 | 285 | 25 | 275 | 1.48e-25 | 110 |
MS.gene057470.t1 | MTR_2g101610 | 29.961 | 257 | 175 | 3 | 33 | 287 | 26 | 279 | 4.10e-25 | 108 |
MS.gene057470.t1 | MTR_4g033310 | 35.912 | 181 | 102 | 3 | 26 | 206 | 23 | 189 | 4.10e-25 | 108 |
MS.gene057470.t1 | MTR_4g033310 | 27.692 | 195 | 97 | 4 | 307 | 459 | 303 | 495 | 2.53e-17 | 84.7 |
MS.gene057470.t1 | MTR_4g033325 | 38.926 | 149 | 86 | 2 | 154 | 300 | 16 | 161 | 4.30e-25 | 107 |
MS.gene057470.t1 | MTR_4g033325 | 29.121 | 182 | 87 | 3 | 307 | 446 | 241 | 422 | 9.96e-18 | 85.5 |
MS.gene057470.t1 | MTR_2g101650 | 29.020 | 255 | 175 | 4 | 33 | 285 | 23 | 273 | 4.74e-25 | 108 |
MS.gene057470.t1 | MTR_7g052600 | 29.502 | 261 | 167 | 4 | 15 | 272 | 4 | 250 | 6.58e-25 | 107 |
MS.gene057470.t1 | MTR_7g051880 | 26.403 | 303 | 202 | 6 | 15 | 309 | 4 | 293 | 1.24e-24 | 107 |
MS.gene057470.t1 | MTR_4g033385 | 37.725 | 167 | 88 | 4 | 119 | 283 | 16 | 168 | 1.75e-24 | 106 |
MS.gene057470.t1 | MTR_4g033385 | 25.641 | 195 | 101 | 4 | 307 | 459 | 268 | 460 | 6.15e-16 | 80.5 |
MS.gene057470.t1 | MTR_5g085850 | 30.556 | 252 | 169 | 2 | 26 | 274 | 22 | 270 | 3.04e-24 | 106 |
MS.gene057470.t1 | MTR_5g085850 | 26.842 | 190 | 102 | 3 | 307 | 461 | 384 | 571 | 2.15e-16 | 82.0 |
MS.gene057470.t1 | MTR_8g103233 | 29.218 | 243 | 169 | 2 | 31 | 273 | 14 | 253 | 1.33e-23 | 104 |
MS.gene057470.t1 | MTR_2g101590 | 27.778 | 288 | 193 | 4 | 33 | 308 | 25 | 309 | 1.83e-23 | 103 |
MS.gene057470.t1 | MTR_4g011280 | 29.297 | 256 | 176 | 3 | 34 | 287 | 32 | 284 | 1.41e-21 | 98.2 |
MS.gene057470.t1 | MTR_1g057460 | 27.875 | 287 | 178 | 6 | 33 | 317 | 43 | 302 | 1.82e-21 | 97.8 |
MS.gene057470.t1 | MTR_6g008690 | 30.870 | 230 | 135 | 4 | 33 | 253 | 6 | 220 | 3.50e-20 | 93.6 |
MS.gene057470.t1 | MTR_6g008690 | 25.275 | 182 | 94 | 3 | 307 | 446 | 352 | 533 | 4.57e-15 | 77.8 |
MS.gene057470.t1 | MTR_7g088820 | 29.032 | 186 | 125 | 4 | 123 | 306 | 4 | 184 | 6.22e-20 | 92.8 |
MS.gene057470.t1 | MTR_2g101560 | 28.958 | 259 | 175 | 4 | 33 | 287 | 26 | 279 | 9.41e-20 | 92.8 |
MS.gene057470.t1 | MTR_7g098210 | 26.894 | 264 | 118 | 7 | 53 | 310 | 1 | 195 | 2.19e-17 | 84.7 |
MS.gene057470.t1 | MTR_0236s0050 | 28.634 | 227 | 133 | 6 | 93 | 317 | 32 | 231 | 4.66e-17 | 84.0 |
MS.gene057470.t1 | MTR_1g057460 | 30.457 | 197 | 123 | 5 | 93 | 287 | 32 | 216 | 1.76e-16 | 82.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057470.t1 | AT5G19640 | 72.325 | 271 | 67 | 2 | 35 | 304 | 60 | 323 | 2.54e-135 | 403 |
MS.gene057470.t1 | AT5G19640 | 44.211 | 190 | 61 | 3 | 308 | 460 | 414 | 595 | 1.63e-40 | 154 |
MS.gene057470.t1 | AT1G32450 | 55.921 | 304 | 125 | 5 | 13 | 310 | 14 | 314 | 6.95e-104 | 322 |
MS.gene057470.t1 | AT1G32450 | 40.000 | 200 | 78 | 4 | 307 | 465 | 401 | 599 | 2.24e-36 | 142 |
MS.gene057470.t1 | AT4G21680 | 56.993 | 286 | 116 | 3 | 26 | 310 | 20 | 299 | 6.37e-100 | 311 |
MS.gene057470.t1 | AT4G21680 | 38.547 | 179 | 67 | 3 | 316 | 451 | 397 | 575 | 3.56e-28 | 118 |
MS.gene057470.t1 | AT2G02020 | 31.084 | 489 | 258 | 12 | 25 | 441 | 33 | 514 | 8.64e-74 | 241 |
MS.gene057470.t1 | AT2G02020 | 30.196 | 510 | 256 | 11 | 25 | 441 | 33 | 535 | 1.98e-71 | 236 |
MS.gene057470.t1 | AT3G54140 | 40.141 | 284 | 163 | 4 | 25 | 307 | 15 | 292 | 1.77e-65 | 221 |
MS.gene057470.t1 | AT3G54140 | 40.884 | 181 | 67 | 2 | 307 | 447 | 381 | 561 | 5.54e-36 | 140 |
MS.gene057470.t1 | AT3G54140 | 40.141 | 284 | 163 | 4 | 25 | 307 | 15 | 292 | 1.77e-65 | 221 |
MS.gene057470.t1 | AT3G54140 | 40.884 | 181 | 67 | 2 | 307 | 447 | 381 | 561 | 5.54e-36 | 140 |
MS.gene057470.t1 | AT2G02040 | 37.762 | 286 | 172 | 3 | 26 | 310 | 33 | 313 | 5.34e-62 | 212 |
MS.gene057470.t1 | AT2G02040 | 33.702 | 181 | 79 | 2 | 308 | 447 | 399 | 579 | 5.56e-24 | 105 |
MS.gene057470.t1 | AT1G62200 | 34.835 | 333 | 211 | 4 | 25 | 355 | 43 | 371 | 7.45e-58 | 201 |
MS.gene057470.t1 | AT1G62200 | 32.955 | 176 | 78 | 3 | 309 | 447 | 414 | 586 | 2.95e-23 | 103 |
MS.gene057470.t1 | AT1G62200 | 35.880 | 301 | 179 | 4 | 25 | 323 | 43 | 331 | 1.25e-57 | 201 |
MS.gene057470.t1 | AT1G62200 | 32.955 | 176 | 78 | 3 | 309 | 447 | 443 | 615 | 3.60e-23 | 103 |
MS.gene057470.t1 | AT1G62200 | 35.880 | 301 | 179 | 4 | 25 | 323 | 57 | 345 | 2.22e-57 | 201 |
MS.gene057470.t1 | AT1G62200 | 32.955 | 176 | 78 | 3 | 309 | 447 | 457 | 629 | 3.52e-23 | 103 |
MS.gene057470.t1 | AT5G01180 | 36.170 | 282 | 172 | 5 | 25 | 305 | 16 | 290 | 2.63e-55 | 194 |
MS.gene057470.t1 | AT5G01180 | 38.333 | 180 | 71 | 2 | 307 | 446 | 381 | 560 | 3.14e-31 | 127 |
MS.gene057470.t1 | AT5G01180 | 36.170 | 282 | 172 | 5 | 25 | 305 | 16 | 290 | 2.63e-55 | 194 |
MS.gene057470.t1 | AT5G01180 | 38.333 | 180 | 71 | 2 | 307 | 446 | 381 | 560 | 3.14e-31 | 127 |
MS.gene057470.t1 | AT5G01180 | 36.170 | 282 | 172 | 5 | 25 | 305 | 16 | 290 | 2.63e-55 | 194 |
MS.gene057470.t1 | AT5G01180 | 38.333 | 180 | 71 | 2 | 307 | 446 | 381 | 560 | 3.14e-31 | 127 |
MS.gene057470.t1 | AT1G72130 | 27.017 | 533 | 267 | 13 | 22 | 446 | 12 | 530 | 9.85e-51 | 181 |
MS.gene057470.t1 | AT2G37900 | 33.916 | 286 | 179 | 5 | 26 | 310 | 30 | 306 | 7.42e-48 | 174 |
MS.gene057470.t1 | AT2G40460 | 33.108 | 296 | 187 | 5 | 14 | 304 | 1 | 290 | 9.31e-48 | 173 |
MS.gene057470.t1 | AT2G40460 | 28.729 | 181 | 88 | 2 | 307 | 446 | 372 | 552 | 1.32e-14 | 76.6 |
MS.gene057470.t1 | AT1G12110 | 36.082 | 291 | 176 | 5 | 26 | 310 | 19 | 305 | 3.51e-47 | 172 |
MS.gene057470.t1 | AT5G46040 | 31.293 | 294 | 190 | 5 | 20 | 310 | 18 | 302 | 3.87e-47 | 172 |
MS.gene057470.t1 | AT5G46040 | 29.293 | 198 | 99 | 3 | 308 | 464 | 382 | 579 | 3.75e-13 | 72.0 |
MS.gene057470.t1 | AT5G13400 | 35.395 | 291 | 177 | 6 | 24 | 306 | 53 | 340 | 1.63e-43 | 162 |
MS.gene057470.t1 | AT5G11570 | 28.875 | 471 | 268 | 9 | 35 | 446 | 14 | 476 | 4.41e-43 | 159 |
MS.gene057470.t1 | AT5G46050 | 31.633 | 294 | 189 | 5 | 20 | 310 | 18 | 302 | 7.49e-43 | 160 |
MS.gene057470.t1 | AT5G46050 | 27.363 | 201 | 105 | 3 | 307 | 466 | 381 | 581 | 3.56e-13 | 72.0 |
MS.gene057470.t1 | AT3G54450 | 32.800 | 250 | 149 | 2 | 33 | 282 | 11 | 241 | 1.02e-41 | 156 |
MS.gene057470.t1 | AT3G54450 | 28.571 | 196 | 93 | 6 | 307 | 457 | 359 | 552 | 2.11e-17 | 85.1 |
MS.gene057470.t1 | AT2G26690 | 33.125 | 320 | 203 | 6 | 26 | 340 | 16 | 329 | 1.37e-40 | 153 |
MS.gene057470.t1 | AT1G72125 | 33.579 | 271 | 166 | 3 | 8 | 274 | 3 | 263 | 1.86e-40 | 153 |
MS.gene057470.t1 | AT3G53960 | 32.082 | 293 | 175 | 8 | 26 | 310 | 29 | 305 | 8.38e-40 | 151 |
MS.gene057470.t1 | AT3G53960 | 28.090 | 178 | 90 | 3 | 307 | 446 | 393 | 570 | 2.58e-15 | 79.0 |
MS.gene057470.t1 | AT1G69870 | 31.481 | 270 | 178 | 4 | 31 | 298 | 48 | 312 | 1.39e-39 | 151 |
MS.gene057470.t1 | AT1G22570 | 36.759 | 253 | 147 | 4 | 34 | 278 | 30 | 277 | 1.96e-39 | 150 |
MS.gene057470.t1 | AT1G22570 | 28.750 | 160 | 75 | 4 | 307 | 427 | 379 | 538 | 1.05e-12 | 70.5 |
MS.gene057470.t1 | AT1G72120 | 34.921 | 252 | 150 | 3 | 26 | 273 | 21 | 262 | 6.39e-38 | 145 |
MS.gene057470.t1 | AT1G22550 | 37.091 | 275 | 161 | 5 | 34 | 302 | 30 | 298 | 5.18e-37 | 143 |
MS.gene057470.t1 | AT1G22540 | 32.331 | 266 | 167 | 4 | 26 | 285 | 22 | 280 | 7.27e-37 | 142 |
MS.gene057470.t1 | AT1G22540 | 28.415 | 183 | 89 | 2 | 306 | 446 | 367 | 549 | 7.63e-19 | 89.7 |
MS.gene057470.t1 | AT1G72140 | 30.798 | 263 | 167 | 3 | 26 | 280 | 26 | 281 | 1.33e-36 | 142 |
MS.gene057470.t1 | AT1G68570 | 31.183 | 279 | 187 | 3 | 33 | 310 | 22 | 296 | 1.96e-36 | 142 |
MS.gene057470.t1 | AT2G37900 | 34.043 | 235 | 145 | 5 | 77 | 310 | 2 | 227 | 6.13e-36 | 139 |
MS.gene057470.t1 | AT2G26690 | 32.886 | 298 | 189 | 6 | 48 | 340 | 5 | 296 | 6.44e-36 | 140 |
MS.gene057470.t1 | AT1G18880 | 31.690 | 284 | 185 | 6 | 37 | 318 | 22 | 298 | 1.63e-35 | 139 |
MS.gene057470.t1 | AT2G26690 | 33.564 | 289 | 181 | 6 | 57 | 340 | 2 | 284 | 1.76e-35 | 138 |
MS.gene057470.t1 | AT1G22570 | 36.885 | 244 | 141 | 4 | 43 | 278 | 2 | 240 | 2.26e-35 | 138 |
MS.gene057470.t1 | AT1G22570 | 28.750 | 160 | 75 | 4 | 307 | 427 | 342 | 501 | 1.08e-12 | 70.5 |
MS.gene057470.t1 | AT3G45690 | 29.730 | 259 | 173 | 2 | 35 | 292 | 19 | 269 | 4.72e-35 | 137 |
MS.gene057470.t1 | AT1G68570 | 31.203 | 266 | 178 | 3 | 46 | 310 | 5 | 266 | 3.58e-34 | 135 |
MS.gene057470.t1 | AT1G27080 | 32.308 | 260 | 171 | 3 | 26 | 284 | 6 | 261 | 6.36e-34 | 134 |
MS.gene057470.t1 | AT5G28470 | 29.688 | 256 | 177 | 1 | 31 | 286 | 14 | 266 | 1.95e-33 | 133 |
MS.gene057470.t1 | AT5G28470 | 29.688 | 256 | 177 | 1 | 31 | 286 | 14 | 266 | 2.21e-33 | 133 |
MS.gene057470.t1 | AT1G69850 | 32.549 | 255 | 155 | 4 | 26 | 274 | 17 | 260 | 5.15e-33 | 132 |
MS.gene057470.t1 | AT3G45710 | 29.457 | 258 | 174 | 1 | 33 | 290 | 20 | 269 | 1.94e-32 | 130 |
MS.gene057470.t1 | AT3G45680 | 28.839 | 267 | 182 | 1 | 32 | 298 | 18 | 276 | 3.05e-32 | 129 |
MS.gene057470.t1 | AT5G62680 | 28.800 | 250 | 174 | 2 | 37 | 285 | 46 | 292 | 3.64e-32 | 130 |
MS.gene057470.t1 | AT1G52190 | 30.820 | 305 | 198 | 5 | 11 | 311 | 5 | 300 | 5.67e-32 | 129 |
MS.gene057470.t1 | AT3G45650 | 28.517 | 263 | 180 | 1 | 25 | 287 | 13 | 267 | 1.13e-31 | 128 |
MS.gene057470.t1 | AT3G45650 | 28.517 | 263 | 180 | 1 | 25 | 287 | 13 | 267 | 1.15e-31 | 128 |
MS.gene057470.t1 | AT3G45720 | 28.417 | 278 | 190 | 2 | 17 | 293 | 2 | 271 | 2.54e-31 | 127 |
MS.gene057470.t1 | AT3G25260 | 27.273 | 264 | 177 | 3 | 13 | 276 | 2 | 250 | 5.26e-31 | 125 |
MS.gene057470.t1 | AT3G47960 | 30.081 | 246 | 168 | 2 | 37 | 282 | 64 | 305 | 7.52e-31 | 126 |
MS.gene057470.t1 | AT5G62730 | 34.000 | 250 | 139 | 6 | 26 | 271 | 48 | 275 | 7.64e-31 | 125 |
MS.gene057470.t1 | AT3G16180 | 30.909 | 275 | 181 | 4 | 11 | 283 | 5 | 272 | 9.17e-31 | 125 |
MS.gene057470.t1 | AT1G59740 | 29.615 | 260 | 179 | 2 | 27 | 285 | 34 | 290 | 2.40e-30 | 124 |
MS.gene057470.t1 | AT3G45660 | 27.715 | 267 | 185 | 1 | 33 | 299 | 20 | 278 | 8.20e-30 | 122 |
MS.gene057470.t1 | AT3G45660 | 27.715 | 267 | 185 | 1 | 33 | 299 | 20 | 278 | 8.20e-30 | 122 |
MS.gene057470.t1 | AT5G62730 | 34.894 | 235 | 127 | 6 | 41 | 271 | 4 | 216 | 8.55e-30 | 122 |
MS.gene057470.t1 | AT3G45660 | 27.715 | 267 | 185 | 1 | 33 | 299 | 41 | 299 | 1.04e-29 | 122 |
MS.gene057470.t1 | AT3G45700 | 28.175 | 252 | 173 | 1 | 36 | 287 | 18 | 261 | 2.12e-29 | 121 |
MS.gene057470.t1 | AT3G21670 | 33.333 | 279 | 172 | 5 | 12 | 285 | 12 | 281 | 5.26e-29 | 120 |
MS.gene057470.t1 | AT3G21670 | 29.146 | 199 | 95 | 4 | 307 | 469 | 386 | 574 | 7.26e-15 | 77.4 |
MS.gene057470.t1 | AT1G72130 | 23.472 | 409 | 202 | 10 | 145 | 446 | 8 | 412 | 6.34e-28 | 115 |
MS.gene057470.t1 | AT1G72130 | 23.472 | 409 | 202 | 10 | 145 | 446 | 8 | 412 | 6.34e-28 | 115 |
MS.gene057470.t1 | AT5G14940 | 29.555 | 247 | 150 | 4 | 33 | 267 | 6 | 240 | 1.99e-26 | 112 |
MS.gene057470.t1 | AT5G14940 | 23.037 | 191 | 107 | 3 | 307 | 457 | 359 | 549 | 4.95e-14 | 74.7 |
MS.gene057470.t1 | AT1G33440 | 29.861 | 288 | 190 | 4 | 26 | 310 | 30 | 308 | 4.59e-26 | 112 |
MS.gene057470.t1 | AT1G33440 | 34.884 | 172 | 70 | 4 | 315 | 446 | 398 | 567 | 9.95e-19 | 89.4 |
MS.gene057470.t1 | AT1G27080 | 31.839 | 223 | 147 | 3 | 63 | 284 | 1 | 219 | 1.37e-25 | 110 |
MS.gene057470.t1 | AT3G25280 | 26.894 | 264 | 180 | 3 | 26 | 289 | 13 | 263 | 2.27e-25 | 109 |
MS.gene057470.t1 | AT1G27040 | 30.645 | 248 | 168 | 2 | 26 | 272 | 19 | 263 | 3.10e-25 | 109 |
MS.gene057470.t1 | AT1G27040 | 30.645 | 248 | 168 | 2 | 26 | 272 | 15 | 259 | 3.47e-25 | 108 |
MS.gene057470.t1 | AT1G69860 | 28.352 | 261 | 172 | 4 | 21 | 274 | 5 | 257 | 1.56e-24 | 107 |
MS.gene057470.t1 | AT3G01350 | 29.130 | 230 | 142 | 3 | 33 | 253 | 6 | 223 | 1.98e-23 | 103 |
MS.gene057470.t1 | AT5G46050 | 33.333 | 192 | 121 | 4 | 122 | 310 | 3 | 190 | 2.02e-23 | 103 |
MS.gene057470.t1 | AT5G46050 | 27.363 | 201 | 105 | 3 | 307 | 466 | 269 | 469 | 3.03e-13 | 72.0 |
MS.gene057470.t1 | AT1G27040 | 30.702 | 228 | 154 | 2 | 46 | 272 | 7 | 231 | 8.75e-23 | 101 |
MS.gene057470.t1 | AT2G38100 | 25.573 | 262 | 170 | 7 | 52 | 311 | 9 | 247 | 2.15e-12 | 69.7 |
MS.gene057470.t1 | AT2G38100 | 25.397 | 252 | 164 | 6 | 62 | 311 | 2 | 231 | 2.55e-12 | 69.3 |
MS.gene057470.t1 | AT2G38100 | 25.573 | 262 | 170 | 7 | 52 | 311 | 15 | 253 | 2.64e-12 | 69.3 |
Find 129 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTCCTTAGTGATTCTTAT+TGG | 0.218343 | 7.2:+84001527 | MS.gene057470:CDS |
CTTTCAGCTCTTCTTTGTTC+TGG | 0.227633 | 7.2:+84001573 | MS.gene057470:CDS |
AATCTTTCTGCTTCCTTTGA+TGG | 0.235148 | 7.2:-84002354 | None:intergenic |
ATTCTATTTGTCAATATATA+TGG | 0.239456 | 7.2:+84001935 | MS.gene057470:CDS |
CATTCATTGATGCAGGGTTT+AGG | 0.255802 | 7.2:+84001813 | MS.gene057470:intron |
ATTCCTTAGTGATTCTTATT+GGG | 0.273297 | 7.2:+84001528 | MS.gene057470:CDS |
TCCTGTCATAAGAGTAATTC+AGG | 0.281677 | 7.2:+84002250 | MS.gene057470:CDS |
ATGAAAGGAAATCATGTTAA+TGG | 0.283632 | 7.2:+84001195 | MS.gene057470:CDS |
TATATGGTTGCATTTGGATA+TGG | 0.287046 | 7.2:+84001951 | MS.gene057470:CDS |
ATTCATTGATGCAGGGTTTA+GGG | 0.288312 | 7.2:+84001814 | MS.gene057470:intron |
TTGGCAACACTGGCATTCTT+TGG | 0.290103 | 7.2:+84001388 | MS.gene057470:CDS |
TTCCTTTGATGGCGGATTCA+TGG | 0.294103 | 7.2:-84002343 | None:intergenic |
TCAATATATATGGTTGCATT+TGG | 0.313334 | 7.2:+84001945 | MS.gene057470:CDS |
TGCCCAACATTCAAGTTATT+CGG | 0.332934 | 7.2:-84003367 | None:intergenic |
TTGGTTTATTATGAAGATTC+CGG | 0.335994 | 7.2:+84002122 | MS.gene057470:CDS |
GACATATGTACCTTATATCT+TGG | 0.347941 | 7.2:-84002385 | None:intergenic |
GTTAATGGAAAAGTGGCAAT+TGG | 0.353174 | 7.2:+84001210 | MS.gene057470:CDS |
TTCTGCATTCCCAAGATATA+AGG | 0.359004 | 7.2:+84002375 | MS.gene057470:CDS |
CTGTTATTGATCAAACCATT+AGG | 0.361766 | 7.2:+84001858 | MS.gene057470:CDS |
CTTGACGAAGGACTCTTGTT+AGG | 0.368596 | 7.2:-84001435 | None:intergenic |
CTTTGGAGTTGGAGTGAACT+TGG | 0.368786 | 7.2:+84001405 | MS.gene057470:CDS |
CACTGCTAAAGGCGAAGAAC+CGG | 0.369409 | 7.2:+84003336 | MS.gene057470:CDS |
CAACCTACCTTAGCAACCTT+TGG | 0.375413 | 7.2:+84001981 | MS.gene057470:CDS |
ATCTTCATAATAAACCAAAA+TGG | 0.378774 | 7.2:-84002117 | None:intergenic |
CAATCGCTTCATCGTCCTCT+TGG | 0.393715 | 7.2:-84003510 | None:intergenic |
CAAGTTCTTGTTCCCTTGGC+CGG | 0.396582 | 7.2:+84002974 | MS.gene057470:CDS |
TGAAGTTCGCTTATCCCCTT+AGG | 0.399055 | 7.2:-84003013 | None:intergenic |
ATTCCACAGTATGTTCTTGT+TGG | 0.400555 | 7.2:+84003160 | MS.gene057470:CDS |
GTTCTGTGCTCGGTGGTACA+AGG | 0.406351 | 7.2:+84003450 | MS.gene057470:CDS |
GGTATGTGGACGTTGGGTTT+CGG | 0.415369 | 7.2:+84002143 | MS.gene057470:CDS |
ATGGGAGTTGGCCTAGTTAT+CGG | 0.422212 | 7.2:+84003040 | MS.gene057470:CDS |
TCGTCAAGTTCTTGTTCCCT+TGG | 0.427315 | 7.2:+84002970 | MS.gene057470:CDS |
TGTTCATTACCGCAACCTAA+TGG | 0.427677 | 7.2:-84001873 | None:intergenic |
GACCAACTTTACGAGGTTAT+CGG | 0.434172 | 7.2:+84002320 | MS.gene057470:CDS |
TCAGCTGCTTCAATCTTGTC+AGG | 0.436426 | 7.2:-84001023 | None:intergenic |
CGAAGTTGGTTCGTTGCAAA+CGG | 0.447191 | 7.2:-84001898 | None:intergenic |
TACCGAATAACTTGAATGTT+GGG | 0.450616 | 7.2:+84003365 | MS.gene057470:CDS |
TGCAACGAACCAACTTCGTT+GGG | 0.450911 | 7.2:+84001903 | MS.gene057470:CDS |
CTGGTGCAACGGAGTTTGTA+AGG | 0.457926 | 7.2:+84003083 | MS.gene057470:CDS |
TTGCAACGAACCAACTTCGT+TGG | 0.459621 | 7.2:+84001902 | MS.gene057470:CDS |
GAACCAACTTCGTTGGGAAC+AGG | 0.460262 | 7.2:+84001909 | MS.gene057470:CDS |
TCGTCGCTGCCGCTAGGAAG+TGG | 0.460606 | 7.2:+84002276 | MS.gene057470:CDS |
ACATATGTACCTTATATCTT+GGG | 0.462362 | 7.2:-84002384 | None:intergenic |
ACACTGGCATTCTTTGGAGT+TGG | 0.464335 | 7.2:+84001394 | MS.gene057470:CDS |
GCCTTGATTTCATTCTTAGC+AGG | 0.466900 | 7.2:+84002191 | MS.gene057470:CDS |
GATTCCGGTATGTGGACGTT+GGG | 0.474446 | 7.2:+84002137 | MS.gene057470:CDS |
TAAAGTTGGTCCTCCTTGGC+AGG | 0.474778 | 7.2:-84002308 | None:intergenic |
AAAATTAAGTGGTAATCCTA+AGG | 0.475355 | 7.2:+84002997 | MS.gene057470:CDS |
CTCGTAAAGTTGGTCCTCCT+TGG | 0.477703 | 7.2:-84002312 | None:intergenic |
ATAATAAACCAAAATGGTGT+TGG | 0.477746 | 7.2:-84002111 | None:intergenic |
GATAAGCGAACTTCAAAGAA+TGG | 0.480783 | 7.2:+84003021 | MS.gene057470:CDS |
TCGAAGATATCGTTATGTTA+AGG | 0.483894 | 7.2:+84002217 | MS.gene057470:CDS |
ACCTGAATTACTCTTATGAC+AGG | 0.485739 | 7.2:-84002251 | None:intergenic |
TGTAGTGTCCTTGTATGTAC+TGG | 0.486453 | 7.2:+84002941 | MS.gene057470:intron |
TCCTGCTAAGAATGAAATCA+AGG | 0.489901 | 7.2:-84002192 | None:intergenic |
AACAATGTCAGCAAGTGGAC+TGG | 0.495272 | 7.2:+84001475 | MS.gene057470:CDS |
TTAATGGAAAAGTGGCAATT+GGG | 0.497820 | 7.2:+84001211 | MS.gene057470:CDS |
TCGTCTACGTGTTCTGTGCT+CGG | 0.499189 | 7.2:+84003440 | MS.gene057470:CDS |
TATATATTGACAAATAGAAT+AGG | 0.502301 | 7.2:-84001932 | None:intergenic |
GGCCGATAACCTCGTAAAGT+TGG | 0.503779 | 7.2:-84002322 | None:intergenic |
AAGTTATTCGGTATCCATCC+CGG | 0.505472 | 7.2:-84003355 | None:intergenic |
ATTATGAAGATTCCGGTATG+TGG | 0.513063 | 7.2:+84002129 | MS.gene057470:CDS |
CCCTTGGCCGGAAAATTAAG+TGG | 0.513372 | 7.2:+84002986 | MS.gene057470:CDS |
TTGATCAAACCATTAGGTTG+CGG | 0.514440 | 7.2:+84001864 | MS.gene057470:CDS |
ACATGTTATGCCGGGAGAGA+AGG | 0.515883 | 7.2:+84003111 | MS.gene057470:CDS |
ATACCGAATAACTTGAATGT+TGG | 0.527198 | 7.2:+84003364 | MS.gene057470:CDS |
TTCTGTGCTCGGTGGTACAA+GGG | 0.528036 | 7.2:+84003451 | MS.gene057470:CDS |
ATCAAATTGATCAGCTCCAA+AGG | 0.528289 | 7.2:-84001997 | None:intergenic |
GAAACCCAACGTCCACATAC+CGG | 0.528818 | 7.2:-84002141 | None:intergenic |
TGAATGTTGGGCACATGGAT+TGG | 0.529142 | 7.2:+84003377 | MS.gene057470:CDS |
TAACTTGAATGTTGGGCACA+TGG | 0.530856 | 7.2:+84003372 | MS.gene057470:CDS |
GTGGCAATTGGGAAGAGTAA+AGG | 0.531735 | 7.2:+84001222 | MS.gene057470:CDS |
TATCGTTATGTTAAGGCGTG+TGG | 0.532404 | 7.2:+84002224 | MS.gene057470:CDS |
CTTTCTGCTTCCTTTGATGG+CGG | 0.532701 | 7.2:-84002351 | None:intergenic |
TTGGGAAGAGTAAAGGAGGA+TGG | 0.532777 | 7.2:+84001229 | MS.gene057470:CDS |
AAGGGCGTCAATAACTTTGA+AGG | 0.533090 | 7.2:+84003469 | MS.gene057470:CDS |
AGGCCTGTTCCCAACGAAGT+TGG | 0.534570 | 7.2:-84001912 | None:intergenic |
AAGGCTAAAACATGTTATGC+CGG | 0.535790 | 7.2:+84003102 | MS.gene057470:CDS |
TCGCAAACATTCCGATAACT+AGG | 0.538544 | 7.2:-84003051 | None:intergenic |
TAATCAAGCATTGGCAACAC+TGG | 0.540136 | 7.2:+84001378 | MS.gene057470:CDS |
TTCCTTAGTGATTCTTATTG+GGG | 0.541192 | 7.2:+84001529 | MS.gene057470:CDS |
AAAGAACTAGCCTTCTCTCC+CGG | 0.541210 | 7.2:-84003121 | None:intergenic |
ATGGTTGCATTTGGATATGG+AGG | 0.541387 | 7.2:+84001954 | MS.gene057470:CDS |
AAATTAAGTGGTAATCCTAA+GGG | 0.543683 | 7.2:+84002998 | MS.gene057470:CDS |
TTCCCCAATAAGAATCACTA+AGG | 0.545318 | 7.2:-84001531 | None:intergenic |
AAATCATGTTAATGGAAAAG+TGG | 0.547233 | 7.2:+84001203 | MS.gene057470:CDS |
GGCCATGAATCCGCCATCAA+AGG | 0.550029 | 7.2:+84002341 | MS.gene057470:CDS |
ATCAGCTCCAAAGGTTGCTA+AGG | 0.551652 | 7.2:-84001988 | None:intergenic |
ATGTTTGCGATGGTTGCAGC+TGG | 0.554672 | 7.2:+84003064 | MS.gene057470:CDS |
AGGCTAAAACATGTTATGCC+GGG | 0.557548 | 7.2:+84003103 | MS.gene057470:CDS |
ATAAGCGAACTTCAAAGAAT+GGG | 0.559609 | 7.2:+84003022 | MS.gene057470:CDS |
GCTGACATTGTTAGCAGCCT+CGG | 0.566694 | 7.2:-84001464 | None:intergenic |
GAATGCAGCTAATCAAGCAT+TGG | 0.570125 | 7.2:+84001369 | MS.gene057470:intron |
ATCGTTATGTTAAGGCGTGT+GGG | 0.575039 | 7.2:+84002225 | MS.gene057470:CDS |
TTTGAAGGTAGTGTGAATCT+CGG | 0.576329 | 7.2:+84003484 | MS.gene057470:CDS |
GCAATTGGGAAGAGTAAAGG+AGG | 0.579422 | 7.2:+84001225 | MS.gene057470:CDS |
CACAGAACACGTAGACGACA+AGG | 0.586767 | 7.2:-84003435 | None:intergenic |
GCTCCAAAGGTTGCTAAGGT+AGG | 0.588042 | 7.2:-84001984 | None:intergenic |
AAAACTGCATACATCTTGCT+AGG | 0.589781 | 7.2:+84001252 | MS.gene057470:CDS |
AAATTAAAATAGGTGATGAA+AGG | 0.590624 | 7.2:+84001180 | MS.gene057470:intron |
TGGTTGCATTTGGATATGGA+GGG | 0.593151 | 7.2:+84001955 | MS.gene057470:CDS |
TCAAAACACTTACTCGAGAG+AGG | 0.595006 | 7.2:+84002040 | MS.gene057470:CDS |
ACTGCTAAAGGCGAAGAACC+GGG | 0.601970 | 7.2:+84003337 | MS.gene057470:CDS |
GTGATGACAGTCACTGCTAA+AGG | 0.603223 | 7.2:+84003325 | MS.gene057470:CDS |
GAACTTCAAAGAATGGGAGT+TGG | 0.604352 | 7.2:+84003028 | MS.gene057470:CDS |
AGATTCCGGTATGTGGACGT+TGG | 0.605482 | 7.2:+84002136 | MS.gene057470:CDS |
GATAAAGTCCAGTACATACA+AGG | 0.608027 | 7.2:-84002949 | None:intergenic |
GAGCACTTAGCGCTGCGAGG+AGG | 0.608956 | 7.2:-84003408 | None:intergenic |
GTGGAATGTTGAGCCTGCCA+AGG | 0.609730 | 7.2:+84002295 | MS.gene057470:CDS |
CTGCTAACAATGTCAGCAAG+TGG | 0.612210 | 7.2:+84001470 | MS.gene057470:CDS |
TGTATGCAGATGTCACCAGC+AGG | 0.613543 | 7.2:+84000984 | None:intergenic |
CAAGGAGGACCAACTTTACG+AGG | 0.615767 | 7.2:+84002313 | MS.gene057470:CDS |
CTTGTCAGGATTGACAGTGT+AGG | 0.621029 | 7.2:-84001009 | None:intergenic |
AGTTATCGGAATGTTTGCGA+TGG | 0.624323 | 7.2:+84003054 | MS.gene057470:CDS |
CTAAAGGCGAAGAACCGGGA+TGG | 0.629833 | 7.2:+84003341 | MS.gene057470:CDS |
TGACAAGATTGAAGCAGCTG+AGG | 0.632286 | 7.2:+84001025 | MS.gene057470:CDS |
TTGACAGTGTAGGATCCTGC+TGG | 0.637806 | 7.2:-84000999 | None:intergenic |
GATGGTTGCAGCTGGTGCAA+CGG | 0.642766 | 7.2:+84003072 | MS.gene057470:CDS |
AATCAAGGCTATAATAGCAG+AGG | 0.651729 | 7.2:-84002177 | None:intergenic |
AATTAAGTGGTAATCCTAAG+GGG | 0.654690 | 7.2:+84002999 | MS.gene057470:CDS |
TAAGAGCACTTAGCGCTGCG+AGG | 0.667558 | 7.2:-84003411 | None:intergenic |
GAATGTTGAGCCTGCCAAGG+AGG | 0.669546 | 7.2:+84002298 | MS.gene057470:CDS |
AAACTATGTTAGCAGCATGA+TGG | 0.672075 | 7.2:+84003294 | MS.gene057470:intron |
TCTACGTGTTCTGTGCTCGG+TGG | 0.678153 | 7.2:+84003443 | MS.gene057470:CDS |
TGTGAATCTCGGAAGCCAAG+AGG | 0.678778 | 7.2:+84003495 | MS.gene057470:CDS |
CCTCGGCACTGTCTTGACGA+AGG | 0.687136 | 7.2:-84001447 | None:intergenic |
GCACCAACAAGAACATACTG+TGG | 0.687478 | 7.2:-84003163 | None:intergenic |
CCTTCGTCAAGACAGTGCCG+AGG | 0.707927 | 7.2:+84001447 | MS.gene057470:CDS |
CTCAACATTCCACTTCCTAG+CGG | 0.781477 | 7.2:-84002285 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAAAAAATAAATTAAAAT+AGG | + | chr7.2:84001170-84001189 | MS.gene057470:intron | 0.0% |
!! | AATAATATATAATACATGTT+TGG | + | chr7.2:84001128-84001147 | MS.gene057470:intron | 10.0% |
!! | ATTCTATTTGTCAATATATA+TGG | + | chr7.2:84001935-84001954 | MS.gene057470:CDS | 15.0% |
!! | TATATATTGACAAATAGAAT+AGG | - | chr7.2:84001935-84001954 | None:intergenic | 15.0% |
!! | TCATTATCAATATATATACA+TGG | + | chr7.2:84001307-84001326 | MS.gene057470:intron | 15.0% |
!! | AAATTAAAATAGGTGATGAA+AGG | + | chr7.2:84001180-84001199 | MS.gene057470:intron | 20.0% |
!! | ATCTTCATAATAAACCAAAA+TGG | - | chr7.2:84002120-84002139 | None:intergenic | 20.0% |
!! | ATGTTTGGTTATATAATGTT+TGG | + | chr7.2:84001143-84001162 | MS.gene057470:intron | 20.0% |
!! | ATTGATCATGAATGAATAAA+TGG | + | chr7.2:84001774-84001793 | MS.gene057470:intron | 20.0% |
!! | TCAACTCAACATATATATAA+AGG | - | chr7.2:84002664-84002683 | None:intergenic | 20.0% |
!! | TTAATTGTTCAACAACTATA+AGG | - | chr7.2:84001747-84001766 | None:intergenic | 20.0% |
!! | TTGTAATTAAATGAACTAAG+TGG | + | chr7.2:84001333-84001352 | MS.gene057470:intron | 20.0% |
! | AAAATTAAGTGGTAATCCTA+AGG | + | chr7.2:84002997-84003016 | MS.gene057470:CDS | 25.0% |
! | AAATCATGTTAATGGAAAAG+TGG | + | chr7.2:84001203-84001222 | MS.gene057470:CDS | 25.0% |
! | AAATTAAGTGGTAATCCTAA+GGG | + | chr7.2:84002998-84003017 | MS.gene057470:CDS | 25.0% |
! | ACATATGTACCTTATATCTT+GGG | - | chr7.2:84002387-84002406 | None:intergenic | 25.0% |
! | ATAATAAACCAAAATGGTGT+TGG | - | chr7.2:84002114-84002133 | None:intergenic | 25.0% |
! | ATGAAAGGAAATCATGTTAA+TGG | + | chr7.2:84001195-84001214 | MS.gene057470:CDS | 25.0% |
! | ATTCCTTAGTGATTCTTATT+GGG | + | chr7.2:84001528-84001547 | MS.gene057470:CDS | 25.0% |
! | GTTAGTTAGTTAGTTATTCT+TGG | + | chr7.2:84001047-84001066 | MS.gene057470:intron | 25.0% |
! | TCAATATATATGGTTGCATT+TGG | + | chr7.2:84001945-84001964 | MS.gene057470:CDS | 25.0% |
! | TTGGTTTATTATGAAGATTC+CGG | + | chr7.2:84002122-84002141 | MS.gene057470:CDS | 25.0% |
!!! | GTTTACATTTTTTCACTCTT+GGG | + | chr7.2:84001502-84001521 | MS.gene057470:CDS | 25.0% |
!!! | TGTTTACATTTTTTCACTCT+TGG | + | chr7.2:84001501-84001520 | MS.gene057470:CDS | 25.0% |
AATTAAGTGGTAATCCTAAG+GGG | + | chr7.2:84002999-84003018 | MS.gene057470:CDS | 30.0% | |
ATAAGCGAACTTCAAAGAAT+GGG | + | chr7.2:84003022-84003041 | MS.gene057470:CDS | 30.0% | |
ATACCGAATAACTTGAATGT+TGG | + | chr7.2:84003364-84003383 | MS.gene057470:CDS | 30.0% | |
ATATATGCATTCATTGATGC+AGG | + | chr7.2:84001806-84001825 | MS.gene057470:intron | 30.0% | |
CATTCCTTAGTGATTCTTAT+TGG | + | chr7.2:84001527-84001546 | MS.gene057470:CDS | 30.0% | |
CTGTTATTGATCAAACCATT+AGG | + | chr7.2:84001858-84001877 | MS.gene057470:CDS | 30.0% | |
GACACTACATATATCAAACA+CGG | - | chr7.2:84002930-84002949 | None:intergenic | 30.0% | |
GACATATGTACCTTATATCT+TGG | - | chr7.2:84002388-84002407 | None:intergenic | 30.0% | |
TAATTGACAAATCCTTCACT+TGG | - | chr7.2:84001102-84001121 | None:intergenic | 30.0% | |
TACCGAATAACTTGAATGTT+GGG | + | chr7.2:84003365-84003384 | MS.gene057470:CDS | 30.0% | |
TATATGCATTCATTGATGCA+GGG | + | chr7.2:84001807-84001826 | MS.gene057470:intron | 30.0% | |
TATATGGTTGCATTTGGATA+TGG | + | chr7.2:84001951-84001970 | MS.gene057470:CDS | 30.0% | |
TATCATTCTCAACACACATT+TGG | - | chr7.2:84002783-84002802 | None:intergenic | 30.0% | |
TCGAAGATATCGTTATGTTA+AGG | + | chr7.2:84002217-84002236 | MS.gene057470:CDS | 30.0% | |
TTAATGGAAAAGTGGCAATT+GGG | + | chr7.2:84001211-84001230 | MS.gene057470:CDS | 30.0% | |
TTCCTTAGTGATTCTTATTG+GGG | + | chr7.2:84001529-84001548 | MS.gene057470:CDS | 30.0% | |
! | AGGATTACCACTTAATTTTC+CGG | - | chr7.2:84002996-84003015 | None:intergenic | 30.0% |
! | TCAGAAGTTTTTGTGTATGT+GGG | + | chr7.2:84003187-84003206 | MS.gene057470:intron | 30.0% |
! | TTCAGAAGTTTTTGTGTATG+TGG | + | chr7.2:84003186-84003205 | MS.gene057470:intron | 30.0% |
! | TTTTACTTTGCACTCAATGT+TGG | + | chr7.2:84002077-84002096 | MS.gene057470:CDS | 30.0% |
AAAACTGCATACATCTTGCT+AGG | + | chr7.2:84001252-84001271 | MS.gene057470:CDS | 35.0% | |
AAACTATGTTAGCAGCATGA+TGG | + | chr7.2:84003294-84003313 | MS.gene057470:intron | 35.0% | |
AAGGCTAAAACATGTTATGC+CGG | + | chr7.2:84003102-84003121 | MS.gene057470:CDS | 35.0% | |
AATCAAGGCTATAATAGCAG+AGG | - | chr7.2:84002180-84002199 | None:intergenic | 35.0% | |
AATCTTTCTGCTTCCTTTGA+TGG | - | chr7.2:84002357-84002376 | None:intergenic | 35.0% | |
ACATATATCAAACACGGACA+TGG | - | chr7.2:84002924-84002943 | None:intergenic | 35.0% | |
ACCTGAATTACTCTTATGAC+AGG | - | chr7.2:84002254-84002273 | None:intergenic | 35.0% | |
AGGCGATGTAATGAACAATA+AGG | + | chr7.2:84002871-84002890 | MS.gene057470:intron | 35.0% | |
ATCAAATTGATCAGCTCCAA+AGG | - | chr7.2:84002000-84002019 | None:intergenic | 35.0% | |
ATGTGTGTTGAGAATGATAC+CGG | + | chr7.2:84002784-84002803 | MS.gene057470:intron | 35.0% | |
ATTATGAAGATTCCGGTATG+TGG | + | chr7.2:84002129-84002148 | MS.gene057470:CDS | 35.0% | |
ATTCATTGATGCAGGGTTTA+GGG | + | chr7.2:84001814-84001833 | MS.gene057470:intron | 35.0% | |
ATTCCACAGTATGTTCTTGT+TGG | + | chr7.2:84003160-84003179 | MS.gene057470:CDS | 35.0% | |
CTCTGTTGTATTCACACAAA+TGG | + | chr7.2:84002829-84002848 | MS.gene057470:intron | 35.0% | |
GATAAAGTCCAGTACATACA+AGG | - | chr7.2:84002952-84002971 | None:intergenic | 35.0% | |
GATAAGCGAACTTCAAAGAA+TGG | + | chr7.2:84003021-84003040 | MS.gene057470:CDS | 35.0% | |
GATGTAATGAACAATAAGGC+AGG | + | chr7.2:84002875-84002894 | MS.gene057470:intron | 35.0% | |
GTTAATGGAAAAGTGGCAAT+TGG | + | chr7.2:84001210-84001229 | MS.gene057470:CDS | 35.0% | |
TCCTGCTAAGAATGAAATCA+AGG | - | chr7.2:84002195-84002214 | None:intergenic | 35.0% | |
TCCTGTCATAAGAGTAATTC+AGG | + | chr7.2:84002250-84002269 | MS.gene057470:CDS | 35.0% | |
TGTATGGCTTCAATTTCTCT+TGG | + | chr7.2:84003271-84003290 | MS.gene057470:intron | 35.0% | |
TTCCCCAATAAGAATCACTA+AGG | - | chr7.2:84001534-84001553 | None:intergenic | 35.0% | |
TTCTGCATTCCCAAGATATA+AGG | + | chr7.2:84002375-84002394 | MS.gene057470:CDS | 35.0% | |
TTTGAAGGTAGTGTGAATCT+CGG | + | chr7.2:84003484-84003503 | MS.gene057470:CDS | 35.0% | |
! | ACTCTTTTCCAACACCATTT+TGG | + | chr7.2:84002103-84002122 | MS.gene057470:CDS | 35.0% |
! | CTTTGGAAGTTCACTTTGTA+TGG | + | chr7.2:84003255-84003274 | MS.gene057470:intron | 35.0% |
! | TGCCCAACATTCAAGTTATT+CGG | - | chr7.2:84003370-84003389 | None:intergenic | 35.0% |
! | TTGATCAAACCATTAGGTTG+CGG | + | chr7.2:84001864-84001883 | MS.gene057470:CDS | 35.0% |
! | TTGTACTGTAACTCAAGTTG+AGG | + | chr7.2:84002754-84002773 | MS.gene057470:intron | 35.0% |
AAGTTATTCGGTATCCATCC+CGG | - | chr7.2:84003358-84003377 | None:intergenic | 40.0% | |
AGGCTAAAACATGTTATGCC+GGG | + | chr7.2:84003103-84003122 | MS.gene057470:CDS | 40.0% | |
AGTTATCGGAATGTTTGCGA+TGG | + | chr7.2:84003054-84003073 | MS.gene057470:CDS | 40.0% | |
ATAATAGTGCACAGCCAAAC+CGG | - | chr7.2:84002806-84002825 | None:intergenic | 40.0% | |
ATCGTTATGTTAAGGCGTGT+GGG | + | chr7.2:84002225-84002244 | MS.gene057470:CDS | 40.0% | |
ATGATTAGATGTCTCGTGTC+TGG | + | chr7.2:84002555-84002574 | MS.gene057470:intron | 40.0% | |
ATGGTTGCATTTGGATATGG+AGG | + | chr7.2:84001954-84001973 | MS.gene057470:CDS | 40.0% | |
CATTCATTGATGCAGGGTTT+AGG | + | chr7.2:84001813-84001832 | MS.gene057470:intron | 40.0% | |
CCTGATGGCATAAAAAGCTT+TGG | + | chr7.2:84003238-84003257 | MS.gene057470:intron | 40.0% | |
CTTTCAGCTCTTCTTTGTTC+TGG | + | chr7.2:84001573-84001592 | MS.gene057470:CDS | 40.0% | |
GAACTTCAAAGAATGGGAGT+TGG | + | chr7.2:84003028-84003047 | MS.gene057470:CDS | 40.0% | |
GAATGCAGCTAATCAAGCAT+TGG | + | chr7.2:84001369-84001388 | MS.gene057470:intron | 40.0% | |
GACCAACTTTACGAGGTTAT+CGG | + | chr7.2:84002320-84002339 | MS.gene057470:CDS | 40.0% | |
GCCTTGATTTCATTCTTAGC+AGG | + | chr7.2:84002191-84002210 | MS.gene057470:CDS | 40.0% | |
TAACTTGAATGTTGGGCACA+TGG | + | chr7.2:84003372-84003391 | MS.gene057470:CDS | 40.0% | |
TATCGTTATGTTAAGGCGTG+TGG | + | chr7.2:84002224-84002243 | MS.gene057470:CDS | 40.0% | |
TCAAAACACTTACTCGAGAG+AGG | + | chr7.2:84002040-84002059 | MS.gene057470:CDS | 40.0% | |
TCGCAAACATTCCGATAACT+AGG | - | chr7.2:84003054-84003073 | None:intergenic | 40.0% | |
TGGTTGCATTTGGATATGGA+GGG | + | chr7.2:84001955-84001974 | MS.gene057470:CDS | 40.0% | |
TGTAGTGTCCTTGTATGTAC+TGG | + | chr7.2:84002941-84002960 | MS.gene057470:intron | 40.0% | |
TGTTCATTACCGCAACCTAA+TGG | - | chr7.2:84001876-84001895 | None:intergenic | 40.0% | |
TTACAGTACAAAGCTGCCAT+TGG | - | chr7.2:84002745-84002764 | None:intergenic | 40.0% | |
TTGAAAGACGGGAATGAATC+CGG | + | chr7.2:84002716-84002735 | MS.gene057470:intron | 40.0% | |
! | CCAAAGCTTTTTATGCCATC+AGG | - | chr7.2:84003241-84003260 | None:intergenic | 40.0% |
! | GCTTCTCTTTTTGTCGAACA+AGG | + | chr7.2:84002851-84002870 | MS.gene057470:intron | 40.0% |
! | GGCTTTTGTCTTTGACATCA+TGG | + | chr7.2:84001835-84001854 | MS.gene057470:CDS | 40.0% |
! | TCCTTCACTTGGTTCGAAAA+TGG | - | chr7.2:84001091-84001110 | None:intergenic | 40.0% |
! | TGTTGAGAATGATACCGGTT+TGG | + | chr7.2:84002789-84002808 | MS.gene057470:intron | 40.0% |
! | TTTTGTGTATGTGGGTCAGT+TGG | + | chr7.2:84003195-84003214 | MS.gene057470:intron | 40.0% |
!! | AAGGGCGTCAATAACTTTGA+AGG | + | chr7.2:84003469-84003488 | MS.gene057470:CDS | 40.0% |
!! | TAATCAAGCATTGGCAACAC+TGG | + | chr7.2:84001378-84001397 | MS.gene057470:CDS | 40.0% |
!! | TGTTGAGTTGAGCAGATTCA+TGG | + | chr7.2:84002673-84002692 | MS.gene057470:intron | 40.0% |
AACAATGTCAGCAAGTGGAC+TGG | + | chr7.2:84001475-84001494 | MS.gene057470:CDS | 45.0% | |
ATCAGCTCCAAAGGTTGCTA+AGG | - | chr7.2:84001991-84002010 | None:intergenic | 45.0% | |
CAACACGGACATTGAAAGAC+GGG | + | chr7.2:84002705-84002724 | MS.gene057470:intron | 45.0% | |
CAACCTACCTTAGCAACCTT+TGG | + | chr7.2:84001981-84002000 | MS.gene057470:CDS | 45.0% | |
CTCAACATTCCACTTCCTAG+CGG | - | chr7.2:84002288-84002307 | None:intergenic | 45.0% | |
CTGCTAACAATGTCAGCAAG+TGG | + | chr7.2:84001470-84001489 | MS.gene057470:CDS | 45.0% | |
CTTGACGAAGGACTCTTGTT+AGG | - | chr7.2:84001438-84001457 | None:intergenic | 45.0% | |
CTTGTCAGGATTGACAGTGT+AGG | - | chr7.2:84001012-84001031 | None:intergenic | 45.0% | |
CTTTCTGCTTCCTTTGATGG+CGG | - | chr7.2:84002354-84002373 | None:intergenic | 45.0% | |
GCAACACGGACATTGAAAGA+CGG | + | chr7.2:84002704-84002723 | MS.gene057470:intron | 45.0% | |
GCAATTGGGAAGAGTAAAGG+AGG | + | chr7.2:84001225-84001244 | MS.gene057470:CDS | 45.0% | |
GCACCAACAAGAACATACTG+TGG | - | chr7.2:84003166-84003185 | None:intergenic | 45.0% | |
GGTCAGTTGGAGTTCTTCAA+TGG | + | chr7.2:84003208-84003227 | MS.gene057470:intron | 45.0% | |
GTGATGACAGTCACTGCTAA+AGG | + | chr7.2:84003325-84003344 | MS.gene057470:CDS | 45.0% | |
GTGGCAATTGGGAAGAGTAA+AGG | + | chr7.2:84001222-84001241 | MS.gene057470:CDS | 45.0% | |
GTTGAGCAGATTCATGGACA+AGG | + | chr7.2:84002679-84002698 | MS.gene057470:intron | 45.0% | |
TCAGCTGCTTCAATCTTGTC+AGG | - | chr7.2:84001026-84001045 | None:intergenic | 45.0% | |
TCGTCAAGTTCTTGTTCCCT+TGG | + | chr7.2:84002970-84002989 | MS.gene057470:CDS | 45.0% | |
TGAAAGACGGGAATGAATCC+GGG | + | chr7.2:84002717-84002736 | MS.gene057470:intron | 45.0% | |
TGAAGTTCGCTTATCCCCTT+AGG | - | chr7.2:84003016-84003035 | None:intergenic | 45.0% | |
TGAATGTTGGGCACATGGAT+TGG | + | chr7.2:84003377-84003396 | MS.gene057470:CDS | 45.0% | |
TGACAAGATTGAAGCAGCTG+AGG | + | chr7.2:84001025-84001044 | MS.gene057470:CDS | 45.0% | |
TGCAACGAACCAACTTCGTT+GGG | + | chr7.2:84001903-84001922 | MS.gene057470:CDS | 45.0% | |
TTCAATGGTCAAGCTCCTGA+TGG | + | chr7.2:84003223-84003242 | MS.gene057470:intron | 45.0% | |
TTGCAACGAACCAACTTCGT+TGG | + | chr7.2:84001902-84001921 | MS.gene057470:CDS | 45.0% | |
TTGGCAACACTGGCATTCTT+TGG | + | chr7.2:84001388-84001407 | MS.gene057470:CDS | 45.0% | |
TTGGGAAGAGTAAAGGAGGA+TGG | + | chr7.2:84001229-84001248 | MS.gene057470:CDS | 45.0% | |
! | ACCACTTAATTTTCCGGCCA+AGG | - | chr7.2:84002990-84003009 | None:intergenic | 45.0% |
! | ATGGGAGTTGGCCTAGTTAT+CGG | + | chr7.2:84003040-84003059 | MS.gene057470:CDS | 45.0% |
! | CCACTTAATTTTCCGGCCAA+GGG | - | chr7.2:84002989-84003008 | None:intergenic | 45.0% |
!! | AAAGAACTAGCCTTCTCTCC+CGG | - | chr7.2:84003124-84003143 | None:intergenic | 45.0% |
!! | ACACTGGCATTCTTTGGAGT+TGG | + | chr7.2:84001394-84001413 | MS.gene057470:CDS | 45.0% |
!! | CGAAGTTGGTTCGTTGCAAA+CGG | - | chr7.2:84001901-84001920 | None:intergenic | 45.0% |
!! | CTTTGGAGTTGGAGTGAACT+TGG | + | chr7.2:84001405-84001424 | MS.gene057470:CDS | 45.0% |
!! | GCCATTTTCGAACCAAGTGA+AGG | + | chr7.2:84001087-84001106 | MS.gene057470:intron | 45.0% |
!! | TTCCTTTGATGGCGGATTCA+TGG | - | chr7.2:84002346-84002365 | None:intergenic | 45.0% |
ACATGTTATGCCGGGAGAGA+AGG | + | chr7.2:84003111-84003130 | MS.gene057470:CDS | 50.0% | |
ACTGCTAAAGGCGAAGAACC+GGG | + | chr7.2:84003337-84003356 | MS.gene057470:CDS | 50.0% | |
AGATTCCGGTATGTGGACGT+TGG | + | chr7.2:84002136-84002155 | MS.gene057470:CDS | 50.0% | |
ATGTTTGCGATGGTTGCAGC+TGG | + | chr7.2:84003064-84003083 | MS.gene057470:CDS | 50.0% | |
CAAGGAGGACCAACTTTACG+AGG | + | chr7.2:84002313-84002332 | MS.gene057470:CDS | 50.0% | |
CAAGTTCTTGTTCCCTTGGC+CGG | + | chr7.2:84002974-84002993 | MS.gene057470:CDS | 50.0% | |
CAATCGCTTCATCGTCCTCT+TGG | - | chr7.2:84003513-84003532 | None:intergenic | 50.0% | |
CACAGAACACGTAGACGACA+AGG | - | chr7.2:84003438-84003457 | None:intergenic | 50.0% | |
CACTGCTAAAGGCGAAGAAC+CGG | + | chr7.2:84003336-84003355 | MS.gene057470:CDS | 50.0% | |
CCCTTGGCCGGAAAATTAAG+TGG | + | chr7.2:84002986-84003005 | MS.gene057470:CDS | 50.0% | |
CTGGTGCAACGGAGTTTGTA+AGG | + | chr7.2:84003083-84003102 | MS.gene057470:CDS | 50.0% | |
GAAACCCAACGTCCACATAC+CGG | - | chr7.2:84002144-84002163 | None:intergenic | 50.0% | |
GAACCAACTTCGTTGGGAAC+AGG | + | chr7.2:84001909-84001928 | MS.gene057470:CDS | 50.0% | |
GATTCCGGTATGTGGACGTT+GGG | + | chr7.2:84002137-84002156 | MS.gene057470:CDS | 50.0% | |
GCTCCAAAGGTTGCTAAGGT+AGG | - | chr7.2:84001987-84002006 | None:intergenic | 50.0% | |
GCTGACATTGTTAGCAGCCT+CGG | - | chr7.2:84001467-84001486 | None:intergenic | 50.0% | |
GGAATGAATCCGGGAACCAA+TGG | + | chr7.2:84002726-84002745 | MS.gene057470:intron | 50.0% | |
GGCCGATAACCTCGTAAAGT+TGG | - | chr7.2:84002325-84002344 | None:intergenic | 50.0% | |
GGTATGTGGACGTTGGGTTT+CGG | + | chr7.2:84002143-84002162 | MS.gene057470:CDS | 50.0% | |
GTCTCGTGTCTGGATACAGT+CGG | + | chr7.2:84002565-84002584 | MS.gene057470:intron | 50.0% | |
GTCTGGATACAGTCGGTGTA+TGG | + | chr7.2:84002572-84002591 | MS.gene057470:intron | 50.0% | |
TCATGGACAAGGCAGCAACA+CGG | + | chr7.2:84002690-84002709 | MS.gene057470:intron | 50.0% | |
TCGTCTACGTGTTCTGTGCT+CGG | + | chr7.2:84003440-84003459 | MS.gene057470:CDS | 50.0% | |
TGTGAATCTCGGAAGCCAAG+AGG | + | chr7.2:84003495-84003514 | MS.gene057470:CDS | 50.0% | |
TTGACAGTGTAGGATCCTGC+TGG | - | chr7.2:84001002-84001021 | None:intergenic | 50.0% | |
! | CTCGTAAAGTTGGTCCTCCT+TGG | - | chr7.2:84002315-84002334 | None:intergenic | 50.0% |
! | TAAAGTTGGTCCTCCTTGGC+AGG | - | chr7.2:84002311-84002330 | None:intergenic | 50.0% |
! | TTCTGTGCTCGGTGGTACAA+GGG | + | chr7.2:84003451-84003470 | MS.gene057470:CDS | 50.0% |
!! | ACAAAGCTGCCATTGGTTCC+CGG | - | chr7.2:84002738-84002757 | None:intergenic | 50.0% |
AACACGGACATGGTTGCTGC+TGG | - | chr7.2:84002914-84002933 | None:intergenic | 55.0% | |
ACACGGACATGGTTGCTGCT+GGG | - | chr7.2:84002913-84002932 | None:intergenic | 55.0% | |
AGGCCTGTTCCCAACGAAGT+TGG | - | chr7.2:84001915-84001934 | None:intergenic | 55.0% | |
CTAAAGGCGAAGAACCGGGA+TGG | + | chr7.2:84003341-84003360 | MS.gene057470:CDS | 55.0% | |
GAATGTTGAGCCTGCCAAGG+AGG | + | chr7.2:84002298-84002317 | MS.gene057470:CDS | 55.0% | |
GATGGTTGCAGCTGGTGCAA+CGG | + | chr7.2:84003072-84003091 | MS.gene057470:CDS | 55.0% | |
GGCCATGAATCCGCCATCAA+AGG | + | chr7.2:84002341-84002360 | MS.gene057470:CDS | 55.0% | |
GTGGAATGTTGAGCCTGCCA+AGG | + | chr7.2:84002295-84002314 | MS.gene057470:CDS | 55.0% | |
TCTACGTGTTCTGTGCTCGG+TGG | + | chr7.2:84003443-84003462 | MS.gene057470:CDS | 55.0% | |
! | GTTCTGTGCTCGGTGGTACA+AGG | + | chr7.2:84003450-84003469 | MS.gene057470:CDS | 55.0% |
!! | TAAGAGCACTTAGCGCTGCG+AGG | - | chr7.2:84003414-84003433 | None:intergenic | 55.0% |
CCTCGGCACTGTCTTGACGA+AGG | - | chr7.2:84001450-84001469 | None:intergenic | 60.0% | |
CCTTCGTCAAGACAGTGCCG+AGG | + | chr7.2:84001447-84001466 | MS.gene057470:CDS | 60.0% | |
! | AGGTTTTCGTCGCTGCCGCT+AGG | + | chr7.2:84002270-84002289 | MS.gene057470:CDS | 60.0% |
GAGCACTTAGCGCTGCGAGG+AGG | - | chr7.2:84003411-84003430 | None:intergenic | 65.0% | |
TCGTCGCTGCCGCTAGGAAG+TGG | + | chr7.2:84002276-84002295 | MS.gene057470:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 84000993 | 84003543 | 84000993 | ID=MS.gene057470 |
chr7.2 | mRNA | 84000993 | 84003543 | 84000993 | ID=MS.gene057470.t1;Parent=MS.gene057470 |
chr7.2 | exon | 84000993 | 84001046 | 84000993 | ID=MS.gene057470.t1.exon1;Parent=MS.gene057470.t1 |
chr7.2 | CDS | 84000993 | 84001046 | 84000993 | ID=cds.MS.gene057470.t1;Parent=MS.gene057470.t1 |
chr7.2 | exon | 84001192 | 84001273 | 84001192 | ID=MS.gene057470.t1.exon2;Parent=MS.gene057470.t1 |
chr7.2 | CDS | 84001192 | 84001273 | 84001192 | ID=cds.MS.gene057470.t1;Parent=MS.gene057470.t1 |
chr7.2 | exon | 84001377 | 84001594 | 84001377 | ID=MS.gene057470.t1.exon3;Parent=MS.gene057470.t1 |
chr7.2 | CDS | 84001377 | 84001594 | 84001377 | ID=cds.MS.gene057470.t1;Parent=MS.gene057470.t1 |
chr7.2 | exon | 84001828 | 84002396 | 84001828 | ID=MS.gene057470.t1.exon4;Parent=MS.gene057470.t1 |
chr7.2 | CDS | 84001828 | 84002396 | 84001828 | ID=cds.MS.gene057470.t1;Parent=MS.gene057470.t1 |
chr7.2 | exon | 84002946 | 84003200 | 84002946 | ID=MS.gene057470.t1.exon5;Parent=MS.gene057470.t1 |
chr7.2 | CDS | 84002946 | 84003200 | 84002946 | ID=cds.MS.gene057470.t1;Parent=MS.gene057470.t1 |
chr7.2 | exon | 84003309 | 84003543 | 84003309 | ID=MS.gene057470.t1.exon6;Parent=MS.gene057470.t1 |
chr7.2 | CDS | 84003309 | 84003543 | 84003309 | ID=cds.MS.gene057470.t1;Parent=MS.gene057470.t1 |
Gene Sequence |
Protein sequence |