AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene91646


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene91646.t1 MTR_7g013270 95.296 574 26 1 22 595 75 647 0.0 1081
MS.gene91646.t1 MTR_7g005930 88.455 589 63 2 1 589 1 584 0.0 1066
MS.gene91646.t1 MTR_1g116930 71.199 559 151 4 38 595 24 573 0.0 824
MS.gene91646.t1 MTR_4g098800 59.675 553 213 5 29 575 93 641 0.0 666
MS.gene91646.t1 MTR_4g098800 59.675 553 213 5 29 575 28 576 0.0 665
MS.gene91646.t1 MTR_5g014150 59.233 574 212 8 29 590 36 599 0.0 664
MS.gene91646.t1 MTR_7g010820 58.916 572 213 7 29 583 18 584 0.0 648
MS.gene91646.t1 MTR_3g462710 44.727 550 290 7 30 571 17 560 9.66e-165 482
MS.gene91646.t1 MTR_7g067010 42.441 549 302 7 31 572 18 559 1.95e-156 461
MS.gene91646.t1 MTR_4g015080 41.252 543 305 7 36 571 33 568 1.73e-149 443
MS.gene91646.t1 MTR_3g112460 38.078 562 332 8 17 573 1 551 4.20e-145 432
MS.gene91646.t1 MTR_4g024930 44.182 550 275 11 30 572 29 553 4.57e-141 421
MS.gene91646.t1 MTR_3g112470 37.722 562 334 8 17 573 1 551 3.27e-140 419
MS.gene91646.t1 MTR_3g112450 38.980 549 321 9 29 573 15 553 1.35e-137 412
MS.gene91646.t1 MTR_3g462710 44.858 457 238 7 123 571 1 451 6.66e-136 404
MS.gene91646.t1 MTR_1g075440 36.519 586 353 8 16 590 5 582 6.29e-131 396
MS.gene91646.t1 MTR_1g042310 36.298 551 338 6 28 571 17 561 1.98e-128 389
MS.gene91646.t1 MTR_7g098200 35.262 553 341 7 28 571 20 564 1.56e-127 387
MS.gene91646.t1 MTR_7g098160 35.243 576 354 9 28 594 24 589 4.33e-127 387
MS.gene91646.t1 MTR_1g042310 36.902 523 317 6 56 571 1 517 1.29e-124 378
MS.gene91646.t1 MTR_1g042310 36.902 523 317 6 56 571 8 524 2.25e-124 378
MS.gene91646.t1 MTR_1g041885 38.189 508 296 6 56 557 1 496 1.78e-123 375
MS.gene91646.t1 MTR_7g098200 34.901 553 333 8 28 571 20 554 4.27e-123 376
MS.gene91646.t1 MTR_5g012270 36.237 574 341 11 14 571 5 569 4.33e-123 375
MS.gene91646.t1 MTR_7g098040 34.542 579 355 11 28 591 25 594 2.53e-122 375
MS.gene91646.t1 MTR_7g098180 34.261 575 358 8 28 590 22 588 4.29e-122 374
MS.gene91646.t1 MTR_7g098230 34.555 573 352 10 8 571 3 561 6.11e-122 373
MS.gene91646.t1 MTR_1g041815 35.304 575 358 6 28 595 18 585 1.81e-121 372
MS.gene91646.t1 MTR_7g098090 35.072 556 339 9 28 569 24 571 7.44e-121 370
MS.gene91646.t1 MTR_1g041835 35.450 567 352 6 28 587 18 577 1.19e-120 369
MS.gene91646.t1 MTR_1g041875 36.023 533 323 6 28 554 20 540 4.24e-120 368
MS.gene91646.t1 MTR_5g012290 36.316 570 337 8 18 571 8 567 2.02e-117 361
MS.gene91646.t1 MTR_7g098220 35.986 553 337 7 28 571 21 565 2.10e-117 361
MS.gene91646.t1 MTR_5g055000 35.189 557 347 8 24 571 6 557 1.10e-116 359
MS.gene91646.t1 MTR_3g072300 35.326 552 339 9 29 571 16 558 1.75e-116 358
MS.gene91646.t1 MTR_4g019580 35.072 556 343 12 29 576 28 573 1.10e-115 357
MS.gene91646.t1 MTR_7g098220 36.952 525 314 7 56 571 5 521 2.75e-114 352
MS.gene91646.t1 MTR_4g101380 36.049 577 350 10 29 591 19 590 1.56e-113 351
MS.gene91646.t1 MTR_7g065080 34.783 552 340 11 29 575 23 559 1.74e-113 350
MS.gene91646.t1 MTR_3g069500 32.384 562 360 9 29 588 27 570 1.38e-108 338
MS.gene91646.t1 MTR_7g006540 35.387 568 336 11 27 572 52 610 5.40e-108 338
MS.gene91646.t1 MTR_4g107580 32.392 602 374 11 15 594 2 592 3.58e-107 335
MS.gene91646.t1 MTR_4g114340 36.096 543 327 8 39 572 26 557 6.02e-107 333
MS.gene91646.t1 MTR_4g123537 35.883 549 335 10 33 576 36 572 3.35e-106 333
MS.gene91646.t1 MTR_3g069440 33.333 570 360 10 29 588 25 584 6.64e-106 331
MS.gene91646.t1 MTR_3g069420 32.118 576 370 11 29 594 26 590 2.32e-105 330
MS.gene91646.t1 MTR_4g033325 35.145 552 321 10 29 571 23 546 4.64e-105 328
MS.gene91646.t1 MTR_3g005010 35.336 566 313 14 21 571 13 540 7.59e-104 325
MS.gene91646.t1 MTR_0294s0020 34.336 565 332 12 29 584 23 557 1.14e-103 324
MS.gene91646.t1 MTR_3g014790 32.874 581 341 11 29 585 5 560 9.71e-103 322
MS.gene91646.t1 MTR_2g017750 32.241 580 367 11 16 572 10 586 1.75e-102 323
MS.gene91646.t1 MTR_2g005130 34.060 596 364 11 1 589 1 574 1.60e-101 320
MS.gene91646.t1 MTR_7g098200 35.746 456 276 7 125 571 3 450 1.75e-101 317
MS.gene91646.t1 MTR_8g038880 33.333 567 337 9 37 585 20 563 2.27e-101 319
MS.gene91646.t1 MTR_5g038060 32.337 569 360 10 36 589 30 588 3.91e-101 319
MS.gene91646.t1 MTR_4g033315 33.982 565 336 12 29 584 23 559 8.38e-101 317
MS.gene91646.t1 MTR_4g033310 33.982 565 336 12 29 584 23 559 8.38e-101 317
MS.gene91646.t1 MTR_8g469480 32.504 563 361 7 40 590 41 596 4.37e-98 311
MS.gene91646.t1 MTR_7g098150 36.916 428 258 7 28 451 24 443 4.87e-98 308
MS.gene91646.t1 MTR_1g085090 32.582 577 354 13 36 594 18 577 8.52e-98 310
MS.gene91646.t1 MTR_7g088825 31.904 583 373 13 24 590 5 579 9.73e-98 310
MS.gene91646.t1 MTR_4g033375 35.433 508 293 11 20 517 14 496 1.49e-97 307
MS.gene91646.t1 MTR_4g033330 34.078 537 319 9 29 556 23 533 2.22e-97 307
MS.gene91646.t1 MTR_8g087780 34.549 576 346 12 21 572 4 572 3.67e-97 308
MS.gene91646.t1 MTR_4g107510 30.308 584 381 10 5 572 9 582 9.69e-96 305
MS.gene91646.t1 MTR_7g088790 32.302 582 373 11 21 589 12 585 1.28e-95 305
MS.gene91646.t1 MTR_7g065080 34.639 485 297 11 96 575 3 472 2.50e-95 301
MS.gene91646.t1 MTR_4g107530 31.071 560 365 8 40 583 36 590 5.04e-95 303
MS.gene91646.t1 MTR_5g085850 32.981 567 354 9 29 586 22 571 8.32e-93 297
MS.gene91646.t1 MTR_4g033395 34.137 498 294 10 29 517 24 496 8.64e-93 294
MS.gene91646.t1 MTR_8g469470 30.068 592 379 8 1 571 1 578 9.41e-93 297
MS.gene91646.t1 MTR_8g087810 33.979 568 344 11 29 572 13 573 6.82e-92 295
MS.gene91646.t1 MTR_7g088820 29.252 588 395 11 18 592 6 585 1.23e-91 294
MS.gene91646.t1 MTR_3g100980 31.579 551 350 11 34 572 13 548 5.19e-91 292
MS.gene91646.t1 MTR_7g111260 30.319 564 375 8 36 595 18 567 2.99e-90 290
MS.gene91646.t1 MTR_4g033325 35.294 459 260 10 122 571 18 448 1.03e-87 280
MS.gene91646.t1 MTR_4g107670 30.389 566 356 9 31 572 18 569 1.02e-86 281
MS.gene91646.t1 MTR_5g038190 29.338 559 382 6 24 572 11 566 1.42e-86 280
MS.gene91646.t1 MTR_4g033325 36.085 424 245 8 157 571 16 422 2.25e-86 275
MS.gene91646.t1 MTR_3g100980 30.052 579 350 12 34 572 13 576 9.20e-85 276
MS.gene91646.t1 MTR_8g469310 31.171 555 348 8 39 572 28 569 1.23e-84 275
MS.gene91646.t1 MTR_7g088820 29.848 526 348 11 80 592 6 523 3.37e-84 273
MS.gene91646.t1 MTR_5g038380 30.660 561 360 8 31 572 22 572 4.14e-83 271
MS.gene91646.t1 MTR_1g026740 30.275 545 360 5 38 571 18 553 5.09e-82 268
MS.gene91646.t1 MTR_4g033385 32.627 472 282 11 122 584 16 460 5.09e-80 259
MS.gene91646.t1 MTR_2g101640 31.512 549 355 8 36 571 22 562 2.88e-78 260
MS.gene91646.t1 MTR_1g009200 29.401 568 373 10 38 590 28 582 3.52e-76 253
MS.gene91646.t1 MTR_2g101610 30.616 552 356 9 36 571 26 566 5.70e-76 254
MS.gene91646.t1 MTR_1g026770 30.142 564 369 10 32 581 10 562 9.55e-76 251
MS.gene91646.t1 MTR_1g026750 30.660 561 358 7 34 576 15 562 1.06e-75 251
MS.gene91646.t1 MTR_8g103233 28.873 568 379 8 34 586 14 571 4.40e-75 250
MS.gene91646.t1 MTR_7g088820 29.375 480 318 11 126 592 4 475 1.68e-74 246
MS.gene91646.t1 MTR_2g101590 30.254 552 358 9 36 571 25 565 5.46e-74 249
MS.gene91646.t1 MTR_2g101650 27.857 560 378 9 36 580 23 571 6.63e-74 247
MS.gene91646.t1 MTR_2g093160 29.433 564 369 10 16 572 4 545 1.16e-72 243
MS.gene91646.t1 MTR_1g057460 30.839 548 341 13 36 571 43 564 1.49e-72 243
MS.gene91646.t1 MTR_4g011280 30.088 565 370 9 37 587 32 585 1.54e-72 244
MS.gene91646.t1 MTR_7g064780 28.269 566 383 9 38 589 27 583 1.19e-71 241
MS.gene91646.t1 MTR_2g093180 29.701 569 368 10 16 575 4 549 5.36e-69 233
MS.gene91646.t1 MTR_7g098210 29.545 528 271 12 56 571 1 439 1.53e-68 229
MS.gene91646.t1 MTR_2g093640 28.697 568 374 9 16 575 4 548 1.56e-68 232
MS.gene91646.t1 MTR_4g107610 27.778 576 388 12 12 571 6 569 2.27e-68 233
MS.gene91646.t1 MTR_2g101560 29.910 555 356 10 36 571 26 566 5.07e-68 233
MS.gene91646.t1 MTR_7g064800 28.345 568 390 8 36 589 25 589 9.65e-68 231
MS.gene91646.t1 MTR_1g057460 31.557 488 296 13 96 571 32 493 1.64e-67 228
MS.gene91646.t1 MTR_6g008690 28.036 560 347 13 36 571 6 533 4.41e-67 228
MS.gene91646.t1 MTR_0236s0050 31.006 487 300 12 96 571 32 493 3.48e-64 219
MS.gene91646.t1 MTR_7g052600 28.546 557 360 10 18 571 4 525 1.13e-59 207
MS.gene91646.t1 MTR_7g051830 28.725 557 359 11 18 571 4 525 1.80e-58 204
MS.gene91646.t1 MTR_7g051880 27.808 543 358 8 29 571 17 525 2.74e-57 201
MS.gene91646.t1 MTR_4g033310 32.500 320 195 8 272 584 190 495 2.09e-49 179
MS.gene91646.t1 MTR_4g033310 35.912 181 102 3 29 209 23 189 6.13e-25 108
MS.gene91646.t1 MTR_3g065350 34.783 161 100 2 348 506 1 158 2.50e-26 105
MS.gene91646.t1 MTR_1g009170 24.250 400 242 10 164 553 9 357 8.58e-26 110
MS.gene91646.t1 MTR_4g033390 29.670 91 60 1 489 575 30 120 2.11e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene91646.t1 AT5G19640 67.151 551 163 5 38 585 60 595 0.0 762
MS.gene91646.t1 AT1G32450 56.271 590 239 9 16 590 14 599 0.0 652
MS.gene91646.t1 AT4G21680 56.584 562 224 7 29 576 20 575 0.0 609
MS.gene91646.t1 AT3G54140 43.761 553 297 7 28 572 15 561 2.57e-169 494
MS.gene91646.t1 AT3G54140 43.761 553 297 7 28 572 15 561 2.57e-169 494
MS.gene91646.t1 AT2G02040 40.942 552 313 5 29 572 33 579 1.46e-155 459
MS.gene91646.t1 AT5G01180 40.942 552 311 8 28 571 16 560 5.20e-153 452
MS.gene91646.t1 AT5G01180 40.942 552 311 8 28 571 16 560 5.20e-153 452
MS.gene91646.t1 AT5G01180 40.942 552 311 8 28 571 16 560 5.20e-153 452
MS.gene91646.t1 AT1G62200 38.727 550 326 6 28 572 43 586 6.83e-143 427
MS.gene91646.t1 AT1G62200 36.960 579 325 7 28 572 43 615 3.03e-137 413
MS.gene91646.t1 AT1G62200 36.960 579 325 7 28 572 57 629 4.18e-137 413
MS.gene91646.t1 AT2G02020 35.596 545 303 7 28 566 33 535 1.64e-121 370
MS.gene91646.t1 AT1G12110 35.951 573 348 9 29 590 19 583 5.30e-115 355
MS.gene91646.t1 AT2G26690 36.528 553 330 9 29 572 16 556 1.28e-113 351
MS.gene91646.t1 AT5G46040 34.142 577 355 11 23 589 18 579 2.89e-113 350
MS.gene91646.t1 AT3G54450 33.982 565 332 12 36 582 11 552 4.15e-113 349
MS.gene91646.t1 AT2G40460 35.512 566 340 8 17 571 1 552 1.24e-112 348
MS.gene91646.t1 AT5G46050 34.542 579 354 11 23 591 18 581 6.07e-111 344
MS.gene91646.t1 AT2G26690 36.535 531 316 9 51 572 5 523 6.16e-109 338
MS.gene91646.t1 AT2G26690 36.973 522 308 9 60 572 2 511 1.08e-108 337
MS.gene91646.t1 AT1G69870 32.582 577 365 11 34 594 48 616 4.92e-107 335
MS.gene91646.t1 AT5G13400 34.938 561 346 8 27 572 53 609 9.23e-107 335
MS.gene91646.t1 AT2G37900 31.720 558 360 9 29 579 30 573 2.98e-105 329
MS.gene91646.t1 AT1G68570 34.286 560 350 9 24 571 12 565 1.72e-103 325
MS.gene91646.t1 AT1G68570 34.766 535 333 8 49 571 5 535 4.39e-101 318
MS.gene91646.t1 AT2G02020 33.028 545 296 11 28 566 33 514 2.45e-99 312
MS.gene91646.t1 AT3G53960 32.737 559 343 13 29 571 29 570 2.86e-99 314
MS.gene91646.t1 AT1G72140 32.258 558 329 9 29 571 26 549 1.07e-98 311
MS.gene91646.t1 AT1G59740 33.154 558 358 10 21 570 23 573 6.64e-97 308
MS.gene91646.t1 AT3G21670 35.315 572 333 11 36 594 27 574 1.32e-96 307
MS.gene91646.t1 AT1G72130 33.573 557 322 11 25 571 12 530 1.32e-96 305
MS.gene91646.t1 AT1G22540 32.491 554 333 9 31 571 24 549 4.67e-94 299
MS.gene91646.t1 AT1G27080 32.486 551 355 9 29 572 6 546 6.38e-94 300
MS.gene91646.t1 AT1G18880 32.182 550 349 11 40 572 22 564 1.01e-93 300
MS.gene91646.t1 AT2G37900 31.755 507 325 9 80 579 2 494 4.15e-93 295
MS.gene91646.t1 AT1G33440 34.664 551 339 9 29 571 30 567 3.15e-92 296
MS.gene91646.t1 AT5G46050 35.849 477 286 10 125 591 3 469 7.72e-91 288
MS.gene91646.t1 AT5G62680 28.956 594 393 8 17 588 26 612 2.81e-90 291
MS.gene91646.t1 AT1G72125 30.769 572 364 8 11 571 3 553 4.27e-89 286
MS.gene91646.t1 AT3G47960 30.364 550 359 7 40 572 64 606 2.68e-87 284
MS.gene91646.t1 AT1G72120 31.119 572 358 9 11 571 3 549 2.09e-86 280
MS.gene91646.t1 AT1G22550 33.577 548 330 12 37 571 30 556 2.34e-86 280
MS.gene91646.t1 AT1G27080 32.296 514 331 9 66 572 1 504 2.63e-85 276
MS.gene91646.t1 AT1G22570 32.833 533 317 12 37 552 30 538 2.72e-85 277
MS.gene91646.t1 AT1G69850 29.545 572 364 10 29 572 17 577 1.14e-82 270
MS.gene91646.t1 AT1G27040 30.442 565 366 6 29 582 19 567 4.94e-82 268
MS.gene91646.t1 AT3G16180 30.132 604 382 12 14 595 5 590 5.45e-82 269
MS.gene91646.t1 AT1G52190 31.177 603 375 15 13 592 3 588 6.12e-82 269
MS.gene91646.t1 AT1G27040 30.442 565 366 6 29 582 15 563 6.54e-82 268
MS.gene91646.t1 AT1G22570 32.824 524 311 12 46 552 2 501 5.07e-81 265
MS.gene91646.t1 AT1G27040 30.769 546 349 7 49 582 7 535 1.64e-79 261
MS.gene91646.t1 AT5G62730 30.662 574 328 11 29 571 48 582 1.24e-77 257
MS.gene91646.t1 AT3G45680 29.487 546 360 7 35 575 18 543 1.75e-77 256
MS.gene91646.t1 AT5G28470 27.965 565 387 9 23 576 3 558 1.97e-77 256
MS.gene91646.t1 AT5G62730 30.948 559 316 11 44 571 4 523 8.29e-77 253
MS.gene91646.t1 AT3G45710 28.991 545 363 7 36 575 20 545 1.34e-75 251
MS.gene91646.t1 AT5G14940 27.957 558 365 10 36 576 6 543 2.12e-75 250
MS.gene91646.t1 AT3G45650 28.725 557 363 8 28 575 13 544 6.95e-75 249
MS.gene91646.t1 AT5G28470 27.788 565 386 10 23 576 3 556 1.98e-74 248
MS.gene91646.t1 AT1G72130 32.102 433 257 8 148 571 8 412 2.85e-72 238
MS.gene91646.t1 AT1G72130 32.102 433 257 8 148 571 8 412 2.85e-72 238
MS.gene91646.t1 AT3G45700 27.911 541 361 8 39 575 18 533 6.77e-72 241
MS.gene91646.t1 AT3G45720 28.086 559 371 9 20 571 2 536 9.40e-72 241
MS.gene91646.t1 AT3G45660 28.233 549 360 7 36 575 20 543 1.42e-71 240
MS.gene91646.t1 AT3G45660 28.233 549 360 7 36 575 20 543 1.42e-71 240
MS.gene91646.t1 AT3G45660 28.233 549 360 7 36 575 41 564 2.11e-71 240
MS.gene91646.t1 AT3G45650 27.616 583 362 9 28 575 13 570 3.78e-70 237
MS.gene91646.t1 AT1G69860 29.725 545 359 10 40 575 21 550 1.18e-69 235
MS.gene91646.t1 AT3G01350 27.018 570 365 13 36 576 6 553 5.17e-68 231
MS.gene91646.t1 AT3G25260 28.750 560 349 15 16 571 2 515 5.15e-66 224
MS.gene91646.t1 AT3G45690 27.143 560 339 11 38 594 19 512 2.46e-63 217
MS.gene91646.t1 AT3G25280 26.422 545 363 11 29 571 13 521 1.15e-52 188
MS.gene91646.t1 AT2G38100 24.030 541 357 13 65 592 2 501 2.36e-38 148
MS.gene91646.t1 AT2G38100 24.319 551 362 14 55 592 9 517 3.47e-38 148
MS.gene91646.t1 AT2G38100 24.638 552 359 16 55 592 15 523 4.55e-38 148
MS.gene91646.t1 AT5G11570 31.746 252 165 4 322 571 230 476 2.31e-33 134
MS.gene91646.t1 AT5G11570 34.188 234 146 5 32 262 6 234 2.44e-28 119

Find 160 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTCCTTAGTGATTCTTAT+TGG 0.218343 7.4:+85756023 MS.gene91646:CDS
CTTTCAGCTCTTCTTTGTTC+TGG 0.227633 7.4:+85756069 MS.gene91646:CDS
AATCTTTCTGCTTCCTTTGA+TGG 0.235148 7.4:-85756846 None:intergenic
CATTGATTGATGCAGGGTTT+AGG 0.262373 7.4:+85756305 MS.gene91646:intron
ATTCTATTTATCAATATATA+TGG 0.263640 7.4:+85756427 MS.gene91646:CDS
ATTCCTTAGTGATTCTTATT+GGG 0.273297 7.4:+85756024 MS.gene91646:CDS
CTTTGAAGGTAGTGTGAATC+TGG 0.279634 7.4:+85757859 MS.gene91646:CDS
CTAGCAACACTGGCATTCTT+TGG 0.281941 7.4:+85755884 MS.gene91646:CDS
TATATGGTTGCATTTGGATA+TGG 0.287046 7.4:+85756443 MS.gene91646:CDS
TTCCTTTGATGGCGGATTCA+TGG 0.294103 7.4:-85756835 None:intergenic
ATAGAAGGAAATCATGTTAA+TGG 0.295194 7.4:+85755683 MS.gene91646:CDS
ATTGATTGATGCAGGGTTTA+GGG 0.307386 7.4:+85756306 MS.gene91646:intron
TCAATATATATGGTTGCATT+TGG 0.313334 7.4:+85756437 MS.gene91646:CDS
TCCTGTCATAAGAGTAATTC+AGG 0.322552 7.4:+85756742 MS.gene91646:CDS
TTCTGCACTCCCACGATATA+AGG 0.324852 7.4:+85756867 MS.gene91646:CDS
CTTTGGAAGTTCACTTTGTA+TGG 0.330166 7.4:+85757631 MS.gene91646:CDS
TGCCCAACATTCAAGTTATT+CGG 0.332934 7.4:-85757743 None:intergenic
TTGGTTTATTATGAAGATTC+CGG 0.335994 7.4:+85756614 MS.gene91646:CDS
TGTTGAGTTGAGCAGATTCA+TGG 0.351671 7.4:+85757049 MS.gene91646:intron
CTGTTATTGATCAAACCATT+AGG 0.361766 7.4:+85756350 MS.gene91646:CDS
CTTTGGAGTTGGAGTGAACT+TGG 0.368786 7.4:+85755901 MS.gene91646:CDS
CACTGCTAAAGGCGAAGAAC+CGG 0.369409 7.4:+85757712 MS.gene91646:CDS
CAACCTACCTTAGCAACCTT+TGG 0.375413 7.4:+85756473 MS.gene91646:CDS
ATCTTCATAATAAACCAAAA+TGG 0.378774 7.4:-85756609 None:intergenic
GGCTGTTGTCTTTGACATCA+TGG 0.380502 7.4:+85756327 MS.gene91646:CDS
CTTGGCGAAGGACTCTTGTT+AGG 0.382586 7.4:-85755931 None:intergenic
TATCATTCTCAACACACATT+TGG 0.384860 7.4:-85757156 None:intergenic
TTGAAGGACGGGAATGAATC+CGG 0.389461 7.4:+85757092 MS.gene91646:CDS
CAATCGCTTCATCGTCCTCT+TGG 0.393715 7.4:-85757886 None:intergenic
CAAGTTCTTGTTCCCTTGGC+CGG 0.396582 7.4:+85757350 MS.gene91646:CDS
TGAAGTTCGCTTATCCCCTT+AGG 0.399055 7.4:-85757389 None:intergenic
ACAAAGCCGCCATTGGTTCC+CGG 0.399986 7.4:-85757111 None:intergenic
ATTCCACAGTATGTTCTTGT+TGG 0.400555 7.4:+85757536 MS.gene91646:CDS
CTCTGTTGTATTCACACAAA+TGG 0.403468 7.4:+85757205 MS.gene91646:CDS
GTTCTGTGCTCGGTGGTACA+AGG 0.406351 7.4:+85757826 MS.gene91646:CDS
GGTATGTGGACGTTGGGTTT+CGG 0.415369 7.4:+85756635 MS.gene91646:CDS
ATGGGAGTTGGCCTAGTTAT+CGG 0.422212 7.4:+85757416 MS.gene91646:CDS
AACACGGACATGGTTGCTGC+TGG 0.422911 7.4:-85757287 None:intergenic
TCGTCAAGTTCTTGTTCCCT+TGG 0.427315 7.4:+85757346 MS.gene91646:CDS
TGTTCATTACCGCAACCTAA+TGG 0.427677 7.4:-85756365 None:intergenic
ATAATAGTGCACAGCCAAAC+TGG 0.430741 7.4:-85757179 None:intergenic
TCAGCTGCTTCAATCTTGTC+AGG 0.436426 7.4:-85755511 None:intergenic
TGTATGGCTTCAATTTCTCT+TGG 0.439597 7.4:+85757647 MS.gene91646:CDS
AAATTAAAATAGGTGATAGA+AGG 0.440132 7.4:+85755668 MS.gene91646:intron
AGGCGATGTAATGAACAATA+AGG 0.444650 7.4:+85757247 MS.gene91646:CDS
TAAAGTTGGTCCTCCTTGGC+AGG 0.448949 7.4:-85756800 None:intergenic
TACCGAATAACTTGAATGTT+GGG 0.450616 7.4:+85757741 MS.gene91646:CDS
CTGGTGCAACGGAGTTTGTA+AGG 0.457926 7.4:+85757459 MS.gene91646:CDS
TAGCAGCCTCGGCACTGTCT+TGG 0.458392 7.4:-85755949 None:intergenic
TGCAACGAACCAACTCCATT+GGG 0.459607 7.4:+85756395 MS.gene91646:CDS
ACACTGGCATTCTTTGGAGT+TGG 0.461540 7.4:+85755890 MS.gene91646:CDS
GCCTTGATTTCATTCTTAGC+AGG 0.466900 7.4:+85756683 MS.gene91646:CDS
GATTCCGGTATGTGGACGTT+GGG 0.474446 7.4:+85756629 MS.gene91646:CDS
TCATCGCTGCCGCTAGGAAG+TGG 0.474741 7.4:+85756768 MS.gene91646:CDS
AAAATTAAGTGGTAATCCTA+AGG 0.475355 7.4:+85757373 MS.gene91646:CDS
CTCGTAAAGTTGGTCCTCCT+TGG 0.477703 7.4:-85756804 None:intergenic
ATAATAAACCAAAATGGTGT+TGG 0.477746 7.4:-85756603 None:intergenic
GATAAGCGAACTTCAAAGAA+TGG 0.480783 7.4:+85757397 MS.gene91646:CDS
TTGCAACGAACCAACTCCAT+TGG 0.481162 7.4:+85756394 MS.gene91646:CDS
TCGAAGATATCGTTATGTTA+AGG 0.483894 7.4:+85756709 MS.gene91646:CDS
GAACCAACTCCATTGGGAAC+AGG 0.485063 7.4:+85756401 MS.gene91646:CDS
TGTAGTGTCCTTGTATGTAC+TGG 0.486453 7.4:+85757317 MS.gene91646:CDS
TCCTGCTAAGAATGAAATCA+AGG 0.489901 7.4:-85756684 None:intergenic
TATATATTGATAAATAGAAT+AGG 0.495269 7.4:-85756424 None:intergenic
AACAATGTCAGCAAGTGGAC+TGG 0.495272 7.4:+85755971 MS.gene91646:CDS
TGGAGTTGGTTCGTTGCAAA+CGG 0.496799 7.4:-85756390 None:intergenic
GGTCAGTTGGAATTCTTCAA+TGG 0.498058 7.4:+85757584 MS.gene91646:CDS
ACCTGAATTACTCTTATGAC+AGG 0.498448 7.4:-85756743 None:intergenic
TCGTCTACGTGTTCTGTGCT+CGG 0.499189 7.4:+85757816 MS.gene91646:CDS
GGCCGTCAACCTCGTAAAGT+TGG 0.503324 7.4:-85756814 None:intergenic
AAGTTATTCGGTATCCATCC+CGG 0.505472 7.4:-85757731 None:intergenic
ATTATGAAGATTCCGGTATG+TGG 0.513063 7.4:+85756621 MS.gene91646:CDS
CCCTTGGCCGGAAAATTAAG+TGG 0.513372 7.4:+85757362 MS.gene91646:CDS
TTGATCAAACCATTAGGTTG+CGG 0.514440 7.4:+85756356 MS.gene91646:CDS
ACATGTTATGCCGGGAGAGA+AGG 0.515883 7.4:+85757487 MS.gene91646:CDS
TGTTGAGAATGATACCAGTT+TGG 0.526462 7.4:+85757165 MS.gene91646:CDS
ATACCGAATAACTTGAATGT+TGG 0.527198 7.4:+85757740 MS.gene91646:CDS
TTCTGTGCTCGGTGGTACAA+GGG 0.528036 7.4:+85757827 MS.gene91646:CDS
ATCAAATTGATCAGCTCCAA+AGG 0.528289 7.4:-85756489 None:intergenic
GAAACCCAACGTCCACATAC+CGG 0.528818 7.4:-85756633 None:intergenic
TGAATGTTGGGCACATGGAT+TGG 0.529142 7.4:+85757753 MS.gene91646:CDS
TAACTTGAATGTTGGGCACA+TGG 0.530856 7.4:+85757748 MS.gene91646:CDS
TATCGTTATGTTAAGGCGTG+TGG 0.532404 7.4:+85756716 MS.gene91646:CDS
CTTTCTGCTTCCTTTGATGG+CGG 0.532701 7.4:-85756843 None:intergenic
TTGGGAAGAGTAAAGGAGGA+TGG 0.532777 7.4:+85755717 MS.gene91646:CDS
AAGGGCGTCAATAACTTTGA+AGG 0.533090 7.4:+85757845 MS.gene91646:CDS
AAGGCTAAAACATGTTATGC+CGG 0.535790 7.4:+85757478 MS.gene91646:CDS
CAACATGGACATTGAAGGAC+GGG 0.537006 7.4:+85757081 MS.gene91646:CDS
TCGCAAACATTCCGATAACT+AGG 0.538544 7.4:-85757427 None:intergenic
TTCCTTAGTGATTCTTATTG+GGG 0.541192 7.4:+85756025 MS.gene91646:CDS
ATGGTTGCATTTGGATATGG+AGG 0.541387 7.4:+85756446 MS.gene91646:CDS
TTACAGTACAAAGCCGCCAT+TGG 0.542281 7.4:-85757118 None:intergenic
AAATTAAGTGGTAATCCTAA+GGG 0.543683 7.4:+85757374 MS.gene91646:CDS
ATGGCAATTGGGAAGAGTAA+AGG 0.544845 7.4:+85755710 MS.gene91646:CDS
GGCCATGAATCCGCCATCAA+AGG 0.545291 7.4:+85756833 MS.gene91646:CDS
TTCCCCAATAAGAATCACTA+AGG 0.545318 7.4:-85756027 None:intergenic
AGGCCTGTTCCCAATGGAGT+TGG 0.546296 7.4:-85756404 None:intergenic
GACCAACTTTACGAGGTTGA+CGG 0.548138 7.4:+85756812 MS.gene91646:CDS
GGCAGCAACATGGACATTGA+AGG 0.550291 7.4:+85757076 MS.gene91646:CDS
ATCAGCTCCAAAGGTTGCTA+AGG 0.551652 7.4:-85756480 None:intergenic
ATGTTTGCGATGGTTGCAGC+TGG 0.554672 7.4:+85757440 MS.gene91646:CDS
AGAGAACTAGCCTTCTCTCC+CGG 0.556637 7.4:-85757497 None:intergenic
AGGCTAAAACATGTTATGCC+GGG 0.557548 7.4:+85757479 MS.gene91646:CDS
ATAAGCGAACTTCAAAGAAT+GGG 0.559609 7.4:+85757398 MS.gene91646:CDS
AACATATGTACCTTATATCG+TGG 0.561166 7.4:-85756877 None:intergenic
CCTCGGCACTGTCTTGGCGA+AGG 0.563162 7.4:-85755943 None:intergenic
AGGTCTTCATCGCTGCCGCT+AGG 0.565098 7.4:+85756762 MS.gene91646:CDS
GCTGACATTGTTAGCAGCCT+CGG 0.566694 7.4:-85755960 None:intergenic
TTTGAAGGTAGTGTGAATCT+GGG 0.569998 7.4:+85757860 MS.gene91646:CDS
TAATCAAGCACTAGCAACAC+TGG 0.574234 7.4:+85755874 MS.gene91646:CDS
TAGGAGGCGACCGATCCTCC+TGG 0.574752 7.4:-85755478 None:intergenic
GCAGATGTCACCAGGAGGAT+CGG 0.574772 7.4:+85755468 None:intergenic
ATCGTTATGTTAAGGCGTGT+GGG 0.575039 7.4:+85756717 MS.gene91646:CDS
GATGTAATGAACAATAAGGC+AGG 0.585511 7.4:+85757251 MS.gene91646:CDS
TAGAATAGGCCTGTTCCCAA+TGG 0.586449 7.4:-85756410 None:intergenic
CACAGAACACGTAGACGACA+AGG 0.586767 7.4:-85757811 None:intergenic
TGAAGGACGGGAATGAATCC+GGG 0.586805 7.4:+85757093 MS.gene91646:CDS
GCTCCAAAGGTTGCTAAGGT+AGG 0.588042 7.4:-85756476 None:intergenic
GTCAGGATTGACAGTGTAGG+AGG 0.589139 7.4:-85755494 None:intergenic
AAAACTGCATACATCTTGCT+AGG 0.589781 7.4:+85755740 MS.gene91646:CDS
GGAATGAATCCGGGAACCAA+TGG 0.591907 7.4:+85757102 MS.gene91646:CDS
ACACGGACATGGTTGCTGCT+GGG 0.592604 7.4:-85757286 None:intergenic
TGGTTGCATTTGGATATGGA+GGG 0.593151 7.4:+85756447 MS.gene91646:CDS
TCAAAACACTTACTCGAGAG+AGG 0.595006 7.4:+85756532 MS.gene91646:CDS
ACTGCTAAAGGCGAAGAACC+GGG 0.601970 7.4:+85757713 MS.gene91646:CDS
GTGATGACAGTCACTGCTAA+AGG 0.603223 7.4:+85757701 MS.gene91646:CDS
GAACTTCAAAGAATGGGAGT+TGG 0.604352 7.4:+85757404 MS.gene91646:CDS
AGATTCCGGTATGTGGACGT+TGG 0.605482 7.4:+85756628 MS.gene91646:CDS
ATGTGTATGCAGATGTCACC+AGG 0.605726 7.4:+85755460 None:intergenic
GATAAAGTCCAGTACATACA+AGG 0.608027 7.4:-85757325 None:intergenic
TTGTACTGTAACTCAAGTTG+AGG 0.608294 7.4:+85757130 MS.gene91646:CDS
GAGCACTTAGCGCTGCGAGG+AGG 0.608956 7.4:-85757784 None:intergenic
CTGCTAACAATGTCAGCAAG+TGG 0.612210 7.4:+85755966 MS.gene91646:CDS
CAAGGAGGACCAACTTTACG+AGG 0.615767 7.4:+85756805 MS.gene91646:CDS
TTCAATGGTCAAGCTCCCGA+TGG 0.619234 7.4:+85757599 MS.gene91646:CDS
GTGGAATGTTGAACCTGCCA+AGG 0.619345 7.4:+85756787 MS.gene91646:CDS
ATGAATCCGGGAACCAATGG+CGG 0.621414 7.4:+85757105 MS.gene91646:CDS
GCAATTGGGAAGAGTAAAGG+AGG 0.622557 7.4:+85755713 MS.gene91646:CDS
ACATATATCAAACACGGACA+TGG 0.623018 7.4:-85757297 None:intergenic
AGTTATCGGAATGTTTGCGA+TGG 0.624323 7.4:+85757430 MS.gene91646:CDS
CTAAAGGCGAAGAACCGGGA+TGG 0.629833 7.4:+85757717 MS.gene91646:CDS
TGACAAGATTGAAGCAGCTG+AGG 0.632286 7.4:+85755513 MS.gene91646:CDS
CTTGTCAGGATTGACAGTGT+AGG 0.634509 7.4:-85755497 None:intergenic
ACATATGTACCTTATATCGT+GGG 0.636035 7.4:-85756876 None:intergenic
TCATGGACAAGGCAGCAACA+TGG 0.642174 7.4:+85757066 MS.gene91646:CDS
GATGGTTGCAGCTGGTGCAA+CGG 0.642766 7.4:+85757448 MS.gene91646:CDS
GCAACATGGACATTGAAGGA+CGG 0.645659 7.4:+85757080 MS.gene91646:CDS
GTTGAGCAGATTCATGGACA+AGG 0.649007 7.4:+85757055 MS.gene91646:intron
AATCAAGGCTATAATAGCAG+AGG 0.651729 7.4:-85756669 None:intergenic
AATTAAGTGGTAATCCTAAG+GGG 0.654690 7.4:+85757375 MS.gene91646:CDS
GAATGTTGAACCTGCCAAGG+AGG 0.661909 7.4:+85756790 MS.gene91646:CDS
TAAGAGCACTTAGCGCTGCG+AGG 0.667558 7.4:-85757787 None:intergenic
AAACTATGTTAGCAGCATGA+TGG 0.672075 7.4:+85757670 MS.gene91646:CDS
TCTACGTGTTCTGTGCTCGG+TGG 0.678153 7.4:+85757819 MS.gene91646:CDS
TGTGAATCTGGGAAGCCAAG+AGG 0.679555 7.4:+85757871 MS.gene91646:CDS
TTCAACATTCCACTTCCTAG+CGG 0.680521 7.4:-85756777 None:intergenic
CCTTCGCCAAGACAGTGCCG+AGG 0.682536 7.4:+85755943 MS.gene91646:CDS
GCACCAACAAGAACATACTG+TGG 0.687478 7.4:-85757539 None:intergenic
GACACTACATATATCAAACA+CGG 0.688984 7.4:-85757303 None:intergenic
TGTATGCAGATGTCACCAGG+AGG 0.778973 7.4:+85755463 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAAATAAATTAAAAT+AGG + chr7.4:85755658-85755677 MS.gene91646:intron 0.0%
!! AATAATATATAATACATGTT+TGG + chr7.4:85755616-85755635 MS.gene91646:intron 10.0%
!! ATTCTATTTATCAATATATA+TGG + chr7.4:85756427-85756446 MS.gene91646:CDS 10.0%
!! TATATATTGATAAATAGAAT+AGG - chr7.4:85756427-85756446 None:intergenic 10.0%
!! AAATCATGTTAATGGAAAAA+TGG + chr7.4:85755691-85755710 MS.gene91646:CDS 20.0%
!! AAATTAAAATAGGTGATAGA+AGG + chr7.4:85755668-85755687 MS.gene91646:intron 20.0%
!! ATCTTCATAATAAACCAAAA+TGG - chr7.4:85756612-85756631 None:intergenic 20.0%
!! ATGTTTGGTTATATAATGTT+TGG + chr7.4:85755631-85755650 MS.gene91646:intron 20.0%
!! ATTAATCATGAATGAATGAA+TGG + chr7.4:85756266-85756285 MS.gene91646:intron 20.0%
!! CAACTCAACATATATATAAA+AGG - chr7.4:85757039-85757058 None:intergenic 20.0%
!! TTAATTGTTCAACAACTATA+AGG - chr7.4:85756243-85756262 None:intergenic 20.0%
!! TTGTAATTAAATGAACTAAG+TGG + chr7.4:85755829-85755848 MS.gene91646:intron 20.0%
!!! GAGTTTAAAACTTATATCTT+GGG - chr7.4:85757008-85757027 None:intergenic 20.0%
!!! TGAGTTTAAAACTTATATCT+TGG - chr7.4:85757009-85757028 None:intergenic 20.0%
! AAAATTAAGTGGTAATCCTA+AGG + chr7.4:85757373-85757392 MS.gene91646:CDS 25.0%
! AAATTAAGTGGTAATCCTAA+GGG + chr7.4:85757374-85757393 MS.gene91646:CDS 25.0%
! ATAATAAACCAAAATGGTGT+TGG - chr7.4:85756606-85756625 None:intergenic 25.0%
! ATAGAAGGAAATCATGTTAA+TGG + chr7.4:85755683-85755702 MS.gene91646:CDS 25.0%
! ATTCCTTAGTGATTCTTATT+GGG + chr7.4:85756024-85756043 MS.gene91646:CDS 25.0%
! GTTAGTTAGTTAGTTATTCT+TGG + chr7.4:85755535-85755554 MS.gene91646:intron 25.0%
! TCAATATATATGGTTGCATT+TGG + chr7.4:85756437-85756456 MS.gene91646:CDS 25.0%
! TTAATGGAAAAATGGCAATT+GGG + chr7.4:85755699-85755718 MS.gene91646:CDS 25.0%
! TTGGTTTATTATGAAGATTC+CGG + chr7.4:85756614-85756633 MS.gene91646:CDS 25.0%
AACATATGTACCTTATATCG+TGG - chr7.4:85756880-85756899 None:intergenic 30.0%
AATTAAGTGGTAATCCTAAG+GGG + chr7.4:85757375-85757394 MS.gene91646:CDS 30.0%
ACATATGTACCTTATATCGT+GGG - chr7.4:85756879-85756898 None:intergenic 30.0%
ATAAGCGAACTTCAAAGAAT+GGG + chr7.4:85757398-85757417 MS.gene91646:CDS 30.0%
ATACCGAATAACTTGAATGT+TGG + chr7.4:85757740-85757759 MS.gene91646:CDS 30.0%
CATTCCTTAGTGATTCTTAT+TGG + chr7.4:85756023-85756042 MS.gene91646:CDS 30.0%
CTGTTATTGATCAAACCATT+AGG + chr7.4:85756350-85756369 MS.gene91646:CDS 30.0%
GACACTACATATATCAAACA+CGG - chr7.4:85757306-85757325 None:intergenic 30.0%
GTTAATGGAAAAATGGCAAT+TGG + chr7.4:85755698-85755717 MS.gene91646:CDS 30.0%
TAATTGACAAATCCTTCACT+TGG - chr7.4:85755590-85755609 None:intergenic 30.0%
TACCGAATAACTTGAATGTT+GGG + chr7.4:85757741-85757760 MS.gene91646:CDS 30.0%
TATATGGTTGCATTTGGATA+TGG + chr7.4:85756443-85756462 MS.gene91646:CDS 30.0%
TATCATTCTCAACACACATT+TGG - chr7.4:85757159-85757178 None:intergenic 30.0%
TCGAAGATATCGTTATGTTA+AGG + chr7.4:85756709-85756728 MS.gene91646:CDS 30.0%
TTCCTTAGTGATTCTTATTG+GGG + chr7.4:85756025-85756044 MS.gene91646:CDS 30.0%
! AGGATTACCACTTAATTTTC+CGG - chr7.4:85757372-85757391 None:intergenic 30.0%
! GTTTACATGTTTTCACTCTT+GGG + chr7.4:85755998-85756017 MS.gene91646:CDS 30.0%
! TCAGAAGTTTTTGTGTATGT+GGG + chr7.4:85757563-85757582 MS.gene91646:CDS 30.0%
! TGTTTACATGTTTTCACTCT+TGG + chr7.4:85755997-85756016 MS.gene91646:CDS 30.0%
! TTCAGAAGTTTTTGTGTATG+TGG + chr7.4:85757562-85757581 MS.gene91646:CDS 30.0%
! TTTTACTTTGCACTCAATGT+TGG + chr7.4:85756569-85756588 MS.gene91646:CDS 30.0%
!! ATATATGCATTGATTGATGC+AGG + chr7.4:85756298-85756317 MS.gene91646:intron 30.0%
!! TATATGCATTGATTGATGCA+GGG + chr7.4:85756299-85756318 MS.gene91646:intron 30.0%
AAAACTGCATACATCTTGCT+AGG + chr7.4:85755740-85755759 MS.gene91646:CDS 35.0%
AAACTATGTTAGCAGCATGA+TGG + chr7.4:85757670-85757689 MS.gene91646:CDS 35.0%
AAGGCTAAAACATGTTATGC+CGG + chr7.4:85757478-85757497 MS.gene91646:CDS 35.0%
AATCAAGGCTATAATAGCAG+AGG - chr7.4:85756672-85756691 None:intergenic 35.0%
AATCTTTCTGCTTCCTTTGA+TGG - chr7.4:85756849-85756868 None:intergenic 35.0%
ACATATATCAAACACGGACA+TGG - chr7.4:85757300-85757319 None:intergenic 35.0%
ACCTGAATTACTCTTATGAC+AGG - chr7.4:85756746-85756765 None:intergenic 35.0%
AGGCGATGTAATGAACAATA+AGG + chr7.4:85757247-85757266 MS.gene91646:CDS 35.0%
ATCAAATTGATCAGCTCCAA+AGG - chr7.4:85756492-85756511 None:intergenic 35.0%
ATTATGAAGATTCCGGTATG+TGG + chr7.4:85756621-85756640 MS.gene91646:CDS 35.0%
ATTCCACAGTATGTTCTTGT+TGG + chr7.4:85757536-85757555 MS.gene91646:CDS 35.0%
ATTGATTGATGCAGGGTTTA+GGG + chr7.4:85756306-85756325 MS.gene91646:intron 35.0%
CTCTGTTGTATTCACACAAA+TGG + chr7.4:85757205-85757224 MS.gene91646:CDS 35.0%
GATAAAGTCCAGTACATACA+AGG - chr7.4:85757328-85757347 None:intergenic 35.0%
GATAAGCGAACTTCAAAGAA+TGG + chr7.4:85757397-85757416 MS.gene91646:CDS 35.0%
GATGTAATGAACAATAAGGC+AGG + chr7.4:85757251-85757270 MS.gene91646:CDS 35.0%
TCCTGCTAAGAATGAAATCA+AGG - chr7.4:85756687-85756706 None:intergenic 35.0%
TCCTGTCATAAGAGTAATTC+AGG + chr7.4:85756742-85756761 MS.gene91646:CDS 35.0%
TGTATGGCTTCAATTTCTCT+TGG + chr7.4:85757647-85757666 MS.gene91646:CDS 35.0%
TGTTGAGAATGATACCAGTT+TGG + chr7.4:85757165-85757184 MS.gene91646:CDS 35.0%
TTCCCCAATAAGAATCACTA+AGG - chr7.4:85756030-85756049 None:intergenic 35.0%
TTTGAAGGTAGTGTGAATCT+GGG + chr7.4:85757860-85757879 MS.gene91646:CDS 35.0%
! ACTCTTTTCCAACACCATTT+TGG + chr7.4:85756595-85756614 MS.gene91646:CDS 35.0%
! CTTTGGAAGTTCACTTTGTA+TGG + chr7.4:85757631-85757650 MS.gene91646:CDS 35.0%
! TCCAAAGCTTTTTATGCCAT+CGG - chr7.4:85757618-85757637 None:intergenic 35.0%
! TGCCCAACATTCAAGTTATT+CGG - chr7.4:85757746-85757765 None:intergenic 35.0%
! TTGATCAAACCATTAGGTTG+CGG + chr7.4:85756356-85756375 MS.gene91646:CDS 35.0%
! TTGTACTGTAACTCAAGTTG+AGG + chr7.4:85757130-85757149 MS.gene91646:CDS 35.0%
AAGTTATTCGGTATCCATCC+CGG - chr7.4:85757734-85757753 None:intergenic 40.0%
AGGCTAAAACATGTTATGCC+GGG + chr7.4:85757479-85757498 MS.gene91646:CDS 40.0%
AGTTATCGGAATGTTTGCGA+TGG + chr7.4:85757430-85757449 MS.gene91646:CDS 40.0%
ATAATAGTGCACAGCCAAAC+TGG - chr7.4:85757182-85757201 None:intergenic 40.0%
ATCGTTATGTTAAGGCGTGT+GGG + chr7.4:85756717-85756736 MS.gene91646:CDS 40.0%
ATGGCAATTGGGAAGAGTAA+AGG + chr7.4:85755710-85755729 MS.gene91646:CDS 40.0%
ATGGTTGCATTTGGATATGG+AGG + chr7.4:85756446-85756465 MS.gene91646:CDS 40.0%
CTTTCAGCTCTTCTTTGTTC+TGG + chr7.4:85756069-85756088 MS.gene91646:CDS 40.0%
GAACTTCAAAGAATGGGAGT+TGG + chr7.4:85757404-85757423 MS.gene91646:CDS 40.0%
GCCTTGATTTCATTCTTAGC+AGG + chr7.4:85756683-85756702 MS.gene91646:CDS 40.0%
GGTCAGTTGGAATTCTTCAA+TGG + chr7.4:85757584-85757603 MS.gene91646:CDS 40.0%
TAACTTGAATGTTGGGCACA+TGG + chr7.4:85757748-85757767 MS.gene91646:CDS 40.0%
TAATCAAGCACTAGCAACAC+TGG + chr7.4:85755874-85755893 MS.gene91646:CDS 40.0%
TATCGTTATGTTAAGGCGTG+TGG + chr7.4:85756716-85756735 MS.gene91646:CDS 40.0%
TCAAAACACTTACTCGAGAG+AGG + chr7.4:85756532-85756551 MS.gene91646:CDS 40.0%
TCGCAAACATTCCGATAACT+AGG - chr7.4:85757430-85757449 None:intergenic 40.0%
TGGTTGCATTTGGATATGGA+GGG + chr7.4:85756447-85756466 MS.gene91646:CDS 40.0%
TGTAGTGTCCTTGTATGTAC+TGG + chr7.4:85757317-85757336 MS.gene91646:CDS 40.0%
TGTTCATTACCGCAACCTAA+TGG - chr7.4:85756368-85756387 None:intergenic 40.0%
TTCAACATTCCACTTCCTAG+CGG - chr7.4:85756780-85756799 None:intergenic 40.0%
! CATTGATTGATGCAGGGTTT+AGG + chr7.4:85756305-85756324 MS.gene91646:intron 40.0%
! CCAAAGCTTTTTATGCCATC+GGG - chr7.4:85757617-85757636 None:intergenic 40.0%
! CTTTGAAGGTAGTGTGAATC+TGG + chr7.4:85757859-85757878 MS.gene91646:CDS 40.0%
! GCTTCTCTTTTTGTCGAACA+AGG + chr7.4:85757227-85757246 MS.gene91646:CDS 40.0%
! TCCTTCACTTGGTTCGAAAA+TGG - chr7.4:85755579-85755598 None:intergenic 40.0%
! TTTTGTGTATGTGGGTCAGT+TGG + chr7.4:85757571-85757590 MS.gene91646:CDS 40.0%
!! AAGGGCGTCAATAACTTTGA+AGG + chr7.4:85757845-85757864 MS.gene91646:CDS 40.0%
!! TGTTGAGTTGAGCAGATTCA+TGG + chr7.4:85757049-85757068 MS.gene91646:intron 40.0%
AACAATGTCAGCAAGTGGAC+TGG + chr7.4:85755971-85755990 MS.gene91646:CDS 45.0%
ATCAGCTCCAAAGGTTGCTA+AGG - chr7.4:85756483-85756502 None:intergenic 45.0%
CAACATGGACATTGAAGGAC+GGG + chr7.4:85757081-85757100 MS.gene91646:CDS 45.0%
CAACCTACCTTAGCAACCTT+TGG + chr7.4:85756473-85756492 MS.gene91646:CDS 45.0%
CCCGATGGCATAAAAAGCTT+TGG + chr7.4:85757614-85757633 MS.gene91646:CDS 45.0%
CTAGCAACACTGGCATTCTT+TGG + chr7.4:85755884-85755903 MS.gene91646:CDS 45.0%
CTGCTAACAATGTCAGCAAG+TGG + chr7.4:85755966-85755985 MS.gene91646:CDS 45.0%
CTTGTCAGGATTGACAGTGT+AGG - chr7.4:85755500-85755519 None:intergenic 45.0%
CTTTCTGCTTCCTTTGATGG+CGG - chr7.4:85756846-85756865 None:intergenic 45.0%
GACCAACTTTACGAGGTTGA+CGG + chr7.4:85756812-85756831 MS.gene91646:CDS 45.0%
GCAACATGGACATTGAAGGA+CGG + chr7.4:85757080-85757099 MS.gene91646:CDS 45.0%
GCAATTGGGAAGAGTAAAGG+AGG + chr7.4:85755713-85755732 MS.gene91646:CDS 45.0%
GCACCAACAAGAACATACTG+TGG - chr7.4:85757542-85757561 None:intergenic 45.0%
GGCTGTTGTCTTTGACATCA+TGG + chr7.4:85756327-85756346 MS.gene91646:CDS 45.0%
GTGATGACAGTCACTGCTAA+AGG + chr7.4:85757701-85757720 MS.gene91646:CDS 45.0%
GTTGAGCAGATTCATGGACA+AGG + chr7.4:85757055-85757074 MS.gene91646:intron 45.0%
TAGAATAGGCCTGTTCCCAA+TGG - chr7.4:85756413-85756432 None:intergenic 45.0%
TCAGCTGCTTCAATCTTGTC+AGG - chr7.4:85755514-85755533 None:intergenic 45.0%
TCGTCAAGTTCTTGTTCCCT+TGG + chr7.4:85757346-85757365 MS.gene91646:CDS 45.0%
TGAAGTTCGCTTATCCCCTT+AGG - chr7.4:85757392-85757411 None:intergenic 45.0%
TGAATGTTGGGCACATGGAT+TGG + chr7.4:85757753-85757772 MS.gene91646:CDS 45.0%
TGACAAGATTGAAGCAGCTG+AGG + chr7.4:85755513-85755532 MS.gene91646:CDS 45.0%
TGCAACGAACCAACTCCATT+GGG + chr7.4:85756395-85756414 MS.gene91646:CDS 45.0%
TTACAGTACAAAGCCGCCAT+TGG - chr7.4:85757121-85757140 None:intergenic 45.0%
TTCTGCACTCCCACGATATA+AGG + chr7.4:85756867-85756886 MS.gene91646:CDS 45.0%
TTGAAGGACGGGAATGAATC+CGG + chr7.4:85757092-85757111 MS.gene91646:CDS 45.0%
TTGCAACGAACCAACTCCAT+TGG + chr7.4:85756394-85756413 MS.gene91646:CDS 45.0%
TTGGGAAGAGTAAAGGAGGA+TGG + chr7.4:85755717-85755736 MS.gene91646:CDS 45.0%
! ACCACTTAATTTTCCGGCCA+AGG - chr7.4:85757366-85757385 None:intergenic 45.0%
! ATGGGAGTTGGCCTAGTTAT+CGG + chr7.4:85757416-85757435 MS.gene91646:CDS 45.0%
! CCACTTAATTTTCCGGCCAA+GGG - chr7.4:85757365-85757384 None:intergenic 45.0%
!! ACACTGGCATTCTTTGGAGT+TGG + chr7.4:85755890-85755909 MS.gene91646:CDS 45.0%
!! CTTTGGAGTTGGAGTGAACT+TGG + chr7.4:85755901-85755920 MS.gene91646:CDS 45.0%
!! GCCATTTTCGAACCAAGTGA+AGG + chr7.4:85755575-85755594 MS.gene91646:intron 45.0%
!! TGGAGTTGGTTCGTTGCAAA+CGG - chr7.4:85756393-85756412 None:intergenic 45.0%
!! TTCCTTTGATGGCGGATTCA+TGG - chr7.4:85756838-85756857 None:intergenic 45.0%
!! AATATATATATATATATACA+TGG + chr7.4:85755803-85755822 MS.gene91646:intron 5.0%
ACATGTTATGCCGGGAGAGA+AGG + chr7.4:85757487-85757506 MS.gene91646:CDS 50.0%
ACTGCTAAAGGCGAAGAACC+GGG + chr7.4:85757713-85757732 MS.gene91646:CDS 50.0%
AGATTCCGGTATGTGGACGT+TGG + chr7.4:85756628-85756647 MS.gene91646:CDS 50.0%
ATGAATCCGGGAACCAATGG+CGG + chr7.4:85757105-85757124 MS.gene91646:CDS 50.0%
ATGTTTGCGATGGTTGCAGC+TGG + chr7.4:85757440-85757459 MS.gene91646:CDS 50.0%
CAAGGAGGACCAACTTTACG+AGG + chr7.4:85756805-85756824 MS.gene91646:CDS 50.0%
CAAGTTCTTGTTCCCTTGGC+CGG + chr7.4:85757350-85757369 MS.gene91646:CDS 50.0%
CAATCGCTTCATCGTCCTCT+TGG - chr7.4:85757889-85757908 None:intergenic 50.0%
CACAGAACACGTAGACGACA+AGG - chr7.4:85757814-85757833 None:intergenic 50.0%
CACTGCTAAAGGCGAAGAAC+CGG + chr7.4:85757712-85757731 MS.gene91646:CDS 50.0%
CCCTTGGCCGGAAAATTAAG+TGG + chr7.4:85757362-85757381 MS.gene91646:CDS 50.0%
CTGGTGCAACGGAGTTTGTA+AGG + chr7.4:85757459-85757478 MS.gene91646:CDS 50.0%
CTTGGCGAAGGACTCTTGTT+AGG - chr7.4:85755934-85755953 None:intergenic 50.0%
GAAACCCAACGTCCACATAC+CGG - chr7.4:85756636-85756655 None:intergenic 50.0%
GAACCAACTCCATTGGGAAC+AGG + chr7.4:85756401-85756420 MS.gene91646:CDS 50.0%
GAATGTTGAACCTGCCAAGG+AGG + chr7.4:85756790-85756809 MS.gene91646:CDS 50.0%
GATTCCGGTATGTGGACGTT+GGG + chr7.4:85756629-85756648 MS.gene91646:CDS 50.0%
GCTCCAAAGGTTGCTAAGGT+AGG - chr7.4:85756479-85756498 None:intergenic 50.0%
GCTGACATTGTTAGCAGCCT+CGG - chr7.4:85755963-85755982 None:intergenic 50.0%
GGAATGAATCCGGGAACCAA+TGG + chr7.4:85757102-85757121 MS.gene91646:CDS 50.0%
GGCAGCAACATGGACATTGA+AGG + chr7.4:85757076-85757095 MS.gene91646:CDS 50.0%
GGTATGTGGACGTTGGGTTT+CGG + chr7.4:85756635-85756654 MS.gene91646:CDS 50.0%
GTCAGGATTGACAGTGTAGG+AGG - chr7.4:85755497-85755516 None:intergenic 50.0%
GTGGAATGTTGAACCTGCCA+AGG + chr7.4:85756787-85756806 MS.gene91646:CDS 50.0%
TCATGGACAAGGCAGCAACA+TGG + chr7.4:85757066-85757085 MS.gene91646:CDS 50.0%
TCGTCTACGTGTTCTGTGCT+CGG + chr7.4:85757816-85757835 MS.gene91646:CDS 50.0%
TGAAGGACGGGAATGAATCC+GGG + chr7.4:85757093-85757112 MS.gene91646:CDS 50.0%
TGTGAATCTGGGAAGCCAAG+AGG + chr7.4:85757871-85757890 MS.gene91646:CDS 50.0%
TTCAATGGTCAAGCTCCCGA+TGG + chr7.4:85757599-85757618 MS.gene91646:CDS 50.0%
! CTCGTAAAGTTGGTCCTCCT+TGG - chr7.4:85756807-85756826 None:intergenic 50.0%
! TAAAGTTGGTCCTCCTTGGC+AGG - chr7.4:85756803-85756822 None:intergenic 50.0%
! TTCTGTGCTCGGTGGTACAA+GGG + chr7.4:85757827-85757846 MS.gene91646:CDS 50.0%
!! AGAGAACTAGCCTTCTCTCC+CGG - chr7.4:85757500-85757519 None:intergenic 50.0%
AACACGGACATGGTTGCTGC+TGG - chr7.4:85757290-85757309 None:intergenic 55.0%
ACACGGACATGGTTGCTGCT+GGG - chr7.4:85757289-85757308 None:intergenic 55.0%
AGGCCTGTTCCCAATGGAGT+TGG - chr7.4:85756407-85756426 None:intergenic 55.0%
CTAAAGGCGAAGAACCGGGA+TGG + chr7.4:85757717-85757736 MS.gene91646:CDS 55.0%
GATGGTTGCAGCTGGTGCAA+CGG + chr7.4:85757448-85757467 MS.gene91646:CDS 55.0%
GGCCATGAATCCGCCATCAA+AGG + chr7.4:85756833-85756852 MS.gene91646:CDS 55.0%
GGCCGTCAACCTCGTAAAGT+TGG - chr7.4:85756817-85756836 None:intergenic 55.0%
TCTACGTGTTCTGTGCTCGG+TGG + chr7.4:85757819-85757838 MS.gene91646:CDS 55.0%
! GTTCTGTGCTCGGTGGTACA+AGG + chr7.4:85757826-85757845 MS.gene91646:CDS 55.0%
!! ACAAAGCCGCCATTGGTTCC+CGG - chr7.4:85757114-85757133 None:intergenic 55.0%
!! TAAGAGCACTTAGCGCTGCG+AGG - chr7.4:85757790-85757809 None:intergenic 55.0%
AGGTCTTCATCGCTGCCGCT+AGG + chr7.4:85756762-85756781 MS.gene91646:CDS 60.0%
TAGCAGCCTCGGCACTGTCT+TGG - chr7.4:85755952-85755971 None:intergenic 60.0%
TCATCGCTGCCGCTAGGAAG+TGG + chr7.4:85756768-85756787 MS.gene91646:CDS 60.0%
CCTCGGCACTGTCTTGGCGA+AGG - chr7.4:85755946-85755965 None:intergenic 65.0%
CCTTCGCCAAGACAGTGCCG+AGG + chr7.4:85755943-85755962 MS.gene91646:CDS 65.0%
GAGCACTTAGCGCTGCGAGG+AGG - chr7.4:85757787-85757806 None:intergenic 65.0%
TAGGAGGCGACCGATCCTCC+TGG - chr7.4:85755481-85755500 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 85755472 85757919 85755472 ID=MS.gene91646
chr7.4 mRNA 85755472 85757919 85755472 ID=MS.gene91646.t1;Parent=MS.gene91646
chr7.4 exon 85755472 85755534 85755472 ID=MS.gene91646.t1.exon1;Parent=MS.gene91646.t1
chr7.4 CDS 85755472 85755534 85755472 ID=cds.MS.gene91646.t1;Parent=MS.gene91646.t1
chr7.4 exon 85755680 85755761 85755680 ID=MS.gene91646.t1.exon2;Parent=MS.gene91646.t1
chr7.4 CDS 85755680 85755761 85755680 ID=cds.MS.gene91646.t1;Parent=MS.gene91646.t1
chr7.4 exon 85755873 85756090 85755873 ID=MS.gene91646.t1.exon3;Parent=MS.gene91646.t1
chr7.4 CDS 85755873 85756090 85755873 ID=cds.MS.gene91646.t1;Parent=MS.gene91646.t1
chr7.4 exon 85756320 85756888 85756320 ID=MS.gene91646.t1.exon4;Parent=MS.gene91646.t1
chr7.4 CDS 85756320 85756888 85756320 ID=cds.MS.gene91646.t1;Parent=MS.gene91646.t1
chr7.4 exon 85757064 85757919 85757064 ID=MS.gene91646.t1.exon5;Parent=MS.gene91646.t1
chr7.4 CDS 85757064 85757919 85757064 ID=cds.MS.gene91646.t1;Parent=MS.gene91646.t1
Gene Sequence

>MS.gene91646

ATGTCACCAGGAGGATCGGTCGCCTCCTACACTGTCAATCCTGACAAGATTGAAGCAGCTGAGGTTAGTTAGTTAGTTATTCTTGGTGAATGTCGTTAACATTGCCATTTTCGAACCAAGTGAAGGATTTGTCAATTAAATATTAATAATATATAATACATGTTTGGTTATATAATGTTTGGTTTTATAAAAAAATAAATTAAAATAGGTGATAGAAGGAAATCATGTTAATGGAAAAATGGCAATTGGGAAGAGTAAAGGAGGATGGAAAACTGCATACATCTTGCTAGGTACTCTAAACTAATCATTAATTATTTGACTCATCATTATCAATATATATATATATATACATGGTAATTGTAATTAAATGAACTAAGTGGAAATTAAATGAATGAATGCAGCTAATCAAGCACTAGCAACACTGGCATTCTTTGGAGTTGGAGTGAACTTGGTTCTGTTCCTAACAAGAGTCCTTCGCCAAGACAGTGCCGAGGCTGCTAACAATGTCAGCAAGTGGACTGGAACTGTTTACATGTTTTCACTCTTGGGAGCATTCCTTAGTGATTCTTATTGGGGAAGATACTTAACATGCACTATCTTTCAGCTCTTCTTTGTTCTGGTATGCTAATATAATGTTTCTTTTTTGATATTACATGCATGTATTGAAATATTTAAGATTGCTTGCATTGACTTGATTCGAACTTATCTACTAATTGACTTGATATTATATGAATGAAATTGAAGACTTTCATTAATCTTGTTTTTGTACCTTATAGTTGTTGAACAATTAATTAATTAATCATGAATGAATGAATGGATATTGAATATATATGCATTGATTGATGCAGGGTTTAGGGCTGTTGTCTTTGACATCATGGCTGTTATTGATCAAACCATTAGGTTGCGGTAATGAACATACCGTTTGCAACGAACCAACTCCATTGGGAACAGGCCTATTCTATTTATCAATATATATGGTTGCATTTGGATATGGAGGGCATCAACCTACCTTAGCAACCTTTGGAGCTGATCAATTTGATGATGATGATGATAAGAATATTCAAAACACTTACTCGAGAGAGGCTTTCTTTAGTTACTTTTACTTTGCACTCAATGTTGGATCACTCTTTTCCAACACCATTTTGGTTTATTATGAAGATTCCGGTATGTGGACGTTGGGTTTCGGTGTCTCGTTAGCCTCTGCTATTATAGCCTTGATTTCATTCTTAGCAGGATCTCGAAGATATCGTTATGTTAAGGCGTGTGGGAATCCTGTCATAAGAGTAATTCAGGTCTTCATCGCTGCCGCTAGGAAGTGGAATGTTGAACCTGCCAAGGAGGACCAACTTTACGAGGTTGACGGCCATGAATCCGCCATCAAAGGAAGCAGAAAGATTCTGCACTCCCACGATATAAGGTACATATGTTACTGCATTCGAAAACTAGCAAGTATAACATATATAATATAGATGCATATGTATTACAAGAAGAATTTAATTATATGCATATTCAGTGAAAGTATGCATTTTCACTCCCAAGATATAAGTTTTAAACTCATTTTTTACCTTTTATATATATGTTGAGTTGAGCAGATTCATGGACAAGGCAGCAACATGGACATTGAAGGACGGGAATGAATCCGGGAACCAATGGCGGCTTTGTACTGTAACTCAAGTTGAGGAAGCCAAATGTGTGTTGAGAATGATACCAGTTTGGCTGTGCACTATTATTTACTCTGTTGTATTCACACAAATGGCTTCTCTTTTTGTCGAACAAGGCGATGTAATGAACAATAAGGCAGGAAATTTTCACTTCCCAGCAGCAACCATGTCCGTGTTTGATATATGTAGTGTCCTTGTATGTACTGGACTTTATCGTCAAGTTCTTGTTCCCTTGGCCGGAAAATTAAGTGGTAATCCTAAGGGGATAAGCGAACTTCAAAGAATGGGAGTTGGCCTAGTTATCGGAATGTTTGCGATGGTTGCAGCTGGTGCAACGGAGTTTGTAAGGCTAAAACATGTTATGCCGGGAGAGAAGGCTAGTTCTCTGAGTATATTCTATCAAATTCCACAGTATGTTCTTGTTGGTGCTTCAGAAGTTTTTGTGTATGTGGGTCAGTTGGAATTCTTCAATGGTCAAGCTCCCGATGGCATAAAAAGCTTTGGAAGTTCACTTTGTATGGCTTCAATTTCTCTTGGAAACTATGTTAGCAGCATGATGGTGAAATGTGTGATGACAGTCACTGCTAAAGGCGAAGAACCGGGATGGATACCGAATAACTTGAATGTTGGGCACATGGATTGGTTTTTCTACCTCCTCGCAGCGCTAAGTGCTCTTAACCTTGTCGTCTACGTGTTCTGTGCTCGGTGGTACAAGGGCGTCAATAACTTTGAAGGTAGTGTGAATCTGGGAAGCCAAGAGGACGATGAAGCGATTGCTAAAGTTTGA

Protein sequence

>MS.gene91646.t1

MSPGGSVASYTVNPDKIEAAEVIEGNHVNGKMAIGKSKGGWKTAYILLANQALATLAFFGVGVNLVLFLTRVLRQDSAEAANNVSKWTGTVYMFSLLGAFLSDSYWGRYLTCTIFQLFFVLGLGLLSLTSWLLLIKPLGCGNEHTVCNEPTPLGTGLFYLSIYMVAFGYGGHQPTLATFGADQFDDDDDKNIQNTYSREAFFSYFYFALNVGSLFSNTILVYYEDSGMWTLGFGVSLASAIIALISFLAGSRRYRYVKACGNPVIRVIQVFIAAARKWNVEPAKEDQLYEVDGHESAIKGSRKILHSHDIRFMDKAATWTLKDGNESGNQWRLCTVTQVEEAKCVLRMIPVWLCTIIYSVVFTQMASLFVEQGDVMNNKAGNFHFPAATMSVFDICSVLVCTGLYRQVLVPLAGKLSGNPKGISELQRMGVGLVIGMFAMVAAGATEFVRLKHVMPGEKASSLSIFYQIPQYVLVGASEVFVYVGQLEFFNGQAPDGIKSFGSSLCMASISLGNYVSSMMVKCVMTVTAKGEEPGWIPNNLNVGHMDWFFYLLAALSALNLVVYVFCARWYKGVNNFEGSVNLGSQEDDEAIAKV