AlfalfaGEDB | MS.gene035324

M. sativa cultivar XinJiangDaYe / MS.gene035324

KEGG: K15032
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF02536.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene035324.t1	XP_003609653.2	93.6	376	23	1	1	375	1	376	1.00E-195	692.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene035324.t1	Q9C6A1	22.4	321	186	11	55	359	123	396	2.6e-06	54.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene035324.t1	G7JKD0	93.6	376	23	1	1	375	1	376	7.4e-196	692.6

TFs/TRs:

Gene ID	Type	Classification
MS.gene035324.t1	TR	mTERF

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene035324	MS.gene004587	PPI
MS.gene035324	MS.gene00385	PPI
MS.gene035324	MS.gene004540	PPI
MS.gene073373	MS.gene035324	PPI
MS.gene035324	MS.gene004590	PPI
MS.gene035324	MS.gene00322	PPI
MS.gene035324	MS.gene52434	PPI
MS.gene035324	MS.gene52433	PPI
MS.gene035324	MS.gene68900	PPI
MS.gene073434	MS.gene035324	PPI
MS.gene035324	MS.gene004589	PPI
MS.gene035324	MS.gene52395	PPI
MS.gene035324	MS.gene073434	PPI
MS.gene035324	MS.gene00282	PPI
MS.gene035324	MS.gene073378	PPI
MS.gene035324	MS.gene52392	PPI
MS.gene035324	MS.gene00383	PPI
MS.gene004590	MS.gene035324	PPI
MS.gene004585	MS.gene035324	PPI
MS.gene035324	MS.gene073373	PPI
MS.gene035324	MS.gene58655	PPI
MS.gene035324	MS.gene52432	PPI
MS.gene035324	MS.gene68901	PPI
MS.gene035324	MS.gene041550	PPI
MS.gene035324	MS.gene00324	PPI
MS.gene035324	MS.gene52427	PPI
MS.gene035324	MS.gene073371	PPI
MS.gene035324	MS.gene00284	PPI
MS.gene035324	MS.gene00286	PPI
MS.gene035324	MS.gene00327	PPI
MS.gene00326	MS.gene035324	PPI
MS.gene035324	MS.gene036497	PPI
MS.gene035324	MS.gene00381	PPI
MS.gene035324	MS.gene52431	PPI
MS.gene035324	MS.gene004581	PPI
MS.gene035324	MS.gene00321	PPI
MS.gene035324	MS.gene58656	PPI
MS.gene035324	MS.gene004583	PPI
MS.gene004543	MS.gene035324	PPI
MS.gene035324	MS.gene073372	PPI
MS.gene035324	MS.gene004588	PPI
MS.gene035324	MS.gene004545	PPI
MS.gene52395	MS.gene035324	PPI
MS.gene035324	MS.gene073433	PPI
MS.gene035324	MS.gene52426	PPI
MS.gene035324	MS.gene073379	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene035324.t1	MTR_4g119580	93.617	376	23	1	1	375	1	376	0.0	689
MS.gene035324.t1	MTR_4g120380	70.027	377	100	3	1	370	1	371	0.0	521
MS.gene035324.t1	MTR_4g120380	70.225	356	93	3	1	349	1	350	1.18e-174	493
MS.gene035324.t1	MTR_4g119550	49.541	327	164	1	44	369	52	378	6.02e-111	330
MS.gene035324.t1	MTR_2g436460	48.795	332	169	1	38	368	42	373	6.06e-109	324
MS.gene035324.t1	MTR_2g437260	45.906	342	183	1	30	369	23	364	3.35e-107	320
MS.gene035324.t1	MTR_2g437040	46.903	339	176	2	33	369	32	368	1.08e-106	318
MS.gene035324.t1	MTR_2g437170	46.348	356	184	3	21	369	33	388	2.03e-103	311
MS.gene035324.t1	MTR_4g119570	61.905	252	63	1	120	371	13	231	2.25e-103	305
MS.gene035324.t1	MTR_2g437150	46.857	350	179	3	27	369	39	388	5.50e-103	310
MS.gene035324.t1	MTR_2g437080	44.086	372	201	4	1	369	1	368	2.67e-102	307
MS.gene035324.t1	MTR_2g437120	46.667	345	170	4	34	369	42	381	4.82e-102	308
MS.gene035324.t1	MTR_2g437960	47.273	330	169	3	45	369	55	384	3.53e-101	305
MS.gene035324.t1	MTR_2g437130	44.751	362	198	1	10	369	8	369	4.00e-101	305
MS.gene035324.t1	MTR_2g437020	47.384	344	172	5	31	369	29	368	4.15e-101	304
MS.gene035324.t1	MTR_2g437960	47.273	330	169	3	45	369	55	384	6.56e-101	305
MS.gene035324.t1	MTR_2g437100	48.795	332	163	3	45	369	62	393	6.58e-101	305
MS.gene035324.t1	MTR_2g437030	44.444	378	203	3	1	371	79	456	9.96e-101	306
MS.gene035324.t1	MTR_2g437200	43.733	375	173	2	33	369	22	396	4.62e-100	302
MS.gene035324.t1	MTR_2g436440	45.614	342	182	2	30	369	35	374	1.29e-98	298
MS.gene035324.t1	MTR_2g437160	46.313	339	178	2	35	369	55	393	1.51e-98	299
MS.gene035324.t1	MTR_2g436400	43.440	343	192	1	29	369	33	375	3.85e-98	296
MS.gene035324.t1	MTR_2g438010	45.161	341	182	2	34	369	61	401	3.83e-97	295
MS.gene035324.t1	MTR_2g437240	43.272	379	173	3	32	372	25	399	5.73e-97	295
MS.gene035324.t1	MTR_2g437060	43.675	332	185	1	40	369	52	383	2.35e-95	290
MS.gene035324.t1	MTR_2g437990	44.575	341	181	3	34	368	41	379	4.48e-94	288
MS.gene035324.t1	MTR_2g076320	43.314	344	182	3	34	368	41	380	2.08e-93	285
MS.gene035324.t1	MTR_2g437180	44.985	329	174	3	45	368	51	377	2.94e-91	280
MS.gene035324.t1	MTR_2g438020	42.700	363	170	2	45	369	73	435	3.33e-90	280
MS.gene035324.t1	MTR_2g437940	42.813	327	160	4	45	369	51	352	6.92e-85	263
MS.gene035324.t1	MTR_2g019810	42.042	333	179	4	44	369	32	357	3.23e-80	250
MS.gene035324.t1	MTR_2g019840	41.317	334	192	3	38	369	38	369	1.99e-78	246
MS.gene035324.t1	MTR_3g450500	33.243	367	229	5	22	373	9	374	1.17e-57	192
MS.gene035324.t1	MTR_4g007490	33.240	358	228	5	21	369	13	368	1.53e-55	187
MS.gene035324.t1	MTR_2g437090	53.947	152	70	0	218	369	5	156	3.79e-53	174
MS.gene035324.t1	MTR_2g437160	48.824	170	87	0	200	369	133	302	2.07e-50	172
MS.gene035324.t1	MTR_2g437160	47.126	87	44	1	35	119	55	141	4.66e-16	78.6
MS.gene035324.t1	MTR_8g080990	29.032	341	232	4	38	371	37	374	2.83e-38	141
MS.gene035324.t1	MTR_8g081000	27.485	342	244	3	38	375	50	391	8.02e-38	140
MS.gene035324.t1	MTR_8g081000	27.485	342	244	3	38	375	50	391	8.22e-38	140
MS.gene035324.t1	MTR_8g081000	27.515	338	241	3	38	371	50	387	1.34e-37	139
MS.gene035324.t1	MTR_2g436370	38.953	172	101	2	23	190	24	195	4.79e-31	117
MS.gene035324.t1	MTR_4g119615	94.000	50	3	0	313	362	26	75	5.80e-24	95.1
MS.gene035324.t1	MTR_3g085240	36.552	145	80	3	19	163	38	170	3.03e-16	78.2
MS.gene035324.t1	MTR_2g034600	27.273	275	176	7	80	340	215	479	4.44e-16	80.1
MS.gene035324.t1	MTR_2g034600	27.273	275	176	7	80	340	280	544	6.01e-16	79.7
MS.gene035324.t1	MTR_2g034600	27.273	275	176	7	80	340	276	540	6.09e-16	79.7
MS.gene035324.t1	MTR_3g092710	24.409	254	171	6	89	322	217	469	4.65e-14	73.9
MS.gene035324.t1	MTR_4g049400	36.842	114	68	2	33	142	38	151	3.86e-13	68.9
MS.gene035324.t1	MTR_8g012210	22.789	294	208	8	87	369	63	348	5.73e-13	69.7
MS.gene035324.t1	MTR_2g436380	33.628	113	68	3	216	328	3	108	3.44e-12	66.6
MS.gene035324.t1	MTR_2g019830	56.667	60	25	1	310	369	139	197	2.32e-11	63.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene035324.t1	AT5G07900	34.024	338	207	5	44	370	69	401	7.53e-62	204
MS.gene035324.t1	AT1G21150	31.212	330	219	4	44	366	56	384	1.38e-46	164
MS.gene035324.t1	AT1G21150	31.212	330	219	4	44	366	120	448	5.82e-46	163
MS.gene035324.t1	AT1G21150	30.030	333	225	4	41	366	17	348	8.03e-45	158
MS.gene035324.t1	AT1G61980	28.338	367	222	7	44	370	52	417	7.83e-43	154
MS.gene035324.t1	AT1G61980	28.338	367	222	7	44	370	52	417	7.83e-43	154
MS.gene035324.t1	AT1G61980	28.338	367	222	7	44	370	52	417	7.83e-43	154
MS.gene035324.t1	AT1G61970	26.500	400	243	10	1	354	5	399	1.01e-36	138
MS.gene035324.t1	AT1G61970	26.500	400	243	10	1	354	5	399	1.01e-36	138
MS.gene035324.t1	AT1G61970	26.500	400	243	10	1	354	5	399	1.01e-36	138
MS.gene035324.t1	AT1G61970	26.500	400	243	10	1	354	5	399	1.01e-36	138
MS.gene035324.t1	AT1G61970	26.500	400	243	10	1	354	5	399	1.01e-36	138
MS.gene035324.t1	AT1G61970	26.500	400	243	10	1	354	5	399	1.01e-36	138
MS.gene035324.t1	AT1G61970	26.500	400	243	10	1	354	5	399	1.01e-36	138
MS.gene035324.t1	AT1G62120	27.297	370	226	8	44	371	56	424	3.76e-36	137
MS.gene035324.t1	AT1G61990	27.473	364	218	7	44	368	52	408	7.95e-34	130
MS.gene035324.t1	AT1G61990	27.473	364	218	7	44	368	52	408	7.95e-34	130
MS.gene035324.t1	AT1G61960	24.670	454	256	10	5	374	6	457	4.57e-31	123
MS.gene035324.t1	AT1G62150	25.255	392	217	8	44	360	58	448	6.74e-30	120
MS.gene035324.t1	AT5G64950	28.739	341	228	7	42	369	38	376	1.03e-29	118
MS.gene035324.t1	AT3G46950	30.196	255	170	5	33	283	38	288	8.02e-27	111
MS.gene035324.t1	AT1G62110	28.340	247	174	2	44	287	52	298	2.23e-25	107
MS.gene035324.t1	AT1G62110	32.000	100	64	1	259	354	340	439	6.37e-11	63.9
MS.gene035324.t1	AT1G62085	30.453	243	166	2	44	283	55	297	3.45e-25	106
MS.gene035324.t1	AT1G62085	30.453	243	166	2	44	283	55	297	3.45e-25	106
MS.gene035324.t1	AT1G62010	24.024	333	212	6	77	370	71	401	6.95e-25	105
MS.gene035324.t1	AT1G56380	24.658	365	225	9	42	360	25	385	4.21e-24	102
MS.gene035324.t1	AT1G56380	24.658	365	225	9	42	360	14	374	4.85e-24	102
MS.gene035324.t1	AT5G23930	28.369	282	189	7	39	314	50	324	7.96e-21	94.0
MS.gene035324.t1	AT4G14605	31.928	166	103	6	171	330	222	383	2.42e-12	68.6
MS.gene035324.t1	AT4G14605	31.928	166	103	6	171	330	222	383	2.42e-12	68.6
MS.gene035324.t1	AT1G79220	24.232	293	206	7	87	369	91	377	3.90e-11	64.7

Find 85 sgRNAs with CRISPR-Local

Find 115 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTGGAGGAGATTAAGGAATT+AGG	0.197682	8.3:+7382554	MS.gene035324:CDS
TGAAGGAGGTAACTACATTT+TGG	0.211721	8.3:-7381942	None:intergenic
ATCAAGCAAGAATTTCAAAT+TGG	0.217026	8.3:-7382450	None:intergenic
GGAGGCTGTGGAGGAGATTA+AGG	0.222304	8.3:+7382547	MS.gene035324:CDS
AAATTGAAGCTTTGGCAAAA+TGG	0.249268	8.3:-7382234	None:intergenic
AACTCATCCTTCAAATAAAA+TGG	0.264656	8.3:-7382923	None:intergenic
TTGGCTATTAAAGTTATATC+AGG	0.283508	8.3:+7382988	MS.gene035324:CDS
TGTAGCTTTGTTGGCCAAAA+AGG	0.286685	8.3:+7382604	MS.gene035324:CDS
TGGAGGAGATTAAGGAATTA+GGG	0.290150	8.3:+7382555	MS.gene035324:CDS
AACGATTCACATACCTTTGC+AGG	0.292723	8.3:-7382949	None:intergenic
TTGAAATTCTTGCTTGATAC+TGG	0.309108	8.3:+7382455	MS.gene035324:CDS
TCCTACCTCACTAACAATTT+CGG	0.319551	8.3:+7382044	MS.gene035324:CDS
ACGAAGGAAACGAGGGTTTC+TGG	0.330683	8.3:-7382303	None:intergenic
AAGTTGATGCCTTGAAGAAC+TGG	0.332328	8.3:+7382654	MS.gene035324:CDS
CTTTGGCAAAATGGATTTGA+TGG	0.343012	8.3:-7382225	None:intergenic
ATCCTTCTTCATCAAACCTT+TGG	0.363759	8.3:-7382885	None:intergenic
GGTGCTGCCAGGAGCAATAA+AGG	0.392734	8.3:-7382794	None:intergenic
TTGGGATCCTTTATTGCTCC+TGG	0.395686	8.3:+7382787	MS.gene035324:CDS
CTTCTTACCAATTCAAAAGT+AGG	0.408654	8.3:-7382350	None:intergenic
TTGGATCCAACAACTTGGTT+GGG	0.412366	8.3:+7382769	MS.gene035324:CDS
TAACAGTATCGGGTTTCTCC+GGG	0.413469	8.3:-7382118	None:intergenic
ATAACAGTATCGGGTTTCTC+CGG	0.415002	8.3:-7382119	None:intergenic
TCAAGCAAGAATTTCAAATT+GGG	0.419573	8.3:-7382449	None:intergenic
TAACCTTATGCTACGGTCTT+CGG	0.426601	8.3:+7382721	MS.gene035324:CDS
AACCTTTGGAAAGAAGATAC+TGG	0.430985	8.3:-7382871	None:intergenic
ACGGTGATGATTATGTCTTC+TGG	0.432888	8.3:-7382278	None:intergenic
GACGGGATCCCTGCGAATGA+TGG	0.437092	8.3:-7382186	None:intergenic
AAGGATCCCAACCAAGTTGT+TGG	0.437597	8.3:-7382775	None:intergenic
ATCAACTTTGGCATCCCATT+GGG	0.443217	8.3:-7382639	None:intergenic
GTTCTTCAAGGCATCAACTT+TGG	0.447538	8.3:-7382651	None:intergenic
TTCCAAAGGTTTGATGAAGA+AGG	0.448858	8.3:+7382883	MS.gene035324:CDS
TGCGAATGATGGATTGTATC+TGG	0.473291	8.3:-7382175	None:intergenic
AGAATAACCCCAGTTCTTCA+AGG	0.473452	8.3:-7382663	None:intergenic
CGAAAAGCTCTGGTGCTGCC+AGG	0.473564	8.3:-7382805	None:intergenic
GGCTATCACTAAATCCCAAT+GGG	0.478420	8.3:+7382625	MS.gene035324:CDS
CATCAACTTTGGCATCCCAT+TGG	0.482441	8.3:-7382640	None:intergenic
TCGGACTTAGTATAGAGAAA+AGG	0.483597	8.3:+7382825	MS.gene035324:CDS
TGTCCGAAGACCGTAGCATA+AGG	0.485794	8.3:-7382724	None:intergenic
TTTGGATCCAACAACTTGGT+TGG	0.491206	8.3:+7382768	MS.gene035324:CDS
AGCGGTGTGGTTGCAGATGA+AGG	0.493188	8.3:-7381959	None:intergenic
TTTCATGCGACCATCACTAA+TGG	0.498728	8.3:-7382426	None:intergenic
TGAGAAGAGCTCTGAGACGG+TGG	0.502155	8.3:-7381914	None:intergenic
TTCTTACCAATTCAAAAGTA+GGG	0.509482	8.3:-7382349	None:intergenic
TGGCTATTAAAGTTATATCA+GGG	0.511825	8.3:+7382989	MS.gene035324:CDS
ATCCAGTATCTTCTTTCCAA+AGG	0.514435	8.3:+7382869	MS.gene035324:CDS
TTTGGCAAAATGGATTTGAT+GGG	0.517742	8.3:-7382224	None:intergenic
ATACTAAGTCCGAAAAGCTC+TGG	0.524827	8.3:-7382815	None:intergenic
GAAGACCGTAGCATAAGGTT+AGG	0.532188	8.3:-7382719	None:intergenic
TGGTTGATCTGAATCTGAAA+TGG	0.533288	8.3:-7382009	None:intergenic
CGACCATCACTAATGGTAGC+AGG	0.533792	8.3:-7382419	None:intergenic
TAGAGAAAAGGCTTAGTCCA+AGG	0.534773	8.3:+7382837	MS.gene035324:CDS
GATGGATTGTATCTGGTCAA+TGG	0.537796	8.3:-7382168	None:intergenic
AAGGTCTGCTTGTAAGCAAA+CGG	0.538087	8.3:-7382499	None:intergenic
AGATACAATCCATCATTCGC+AGG	0.541336	8.3:+7382177	MS.gene035324:CDS
TACTGGATAACTGAAGCCCT+TGG	0.548630	8.3:-7382854	None:intergenic
AGTTGATGCCTTGAAGAACT+GGG	0.549779	8.3:+7382655	MS.gene035324:CDS
GCCGAAATTGTTAGTGAGGT+AGG	0.554634	8.3:-7382045	None:intergenic
TAGGGATAATGTGTTTGTTG+AGG	0.555795	8.3:-7382331	None:intergenic
TTTCCTGCTACCATTAGTGA+TGG	0.567385	8.3:+7382416	MS.gene035324:CDS
AGGCTATCACTAAATCCCAA+TGG	0.578405	8.3:+7382624	MS.gene035324:CDS
GGGTTTGAGACGAAAACGAC+GGG	0.584914	8.3:-7382203	None:intergenic
AGGATGAGTTGTTCCTGCAA+AGG	0.601687	8.3:+7382936	MS.gene035324:CDS
GAAACGAGGGTTTCTGGTCA+CGG	0.603602	8.3:-7382297	None:intergenic
AGAGAAAAGGCTTAGTCCAA+GGG	0.604964	8.3:+7382838	MS.gene035324:CDS
GCTATTAAAGTTATATCAGG+GGG	0.615187	8.3:+7382991	MS.gene035324:CDS
TTGGCAAAATGGATTTGATG+GGG	0.615509	8.3:-7382223	None:intergenic
AGAGCAAGTTGTTGAGAGAG+CGG	0.616014	8.3:-7381977	None:intergenic
ATAAGCCGAAATTGTTAGTG+AGG	0.618337	8.3:-7382049	None:intergenic
CTGGTCAATGGAGAAACCGT+GGG	0.618470	8.3:-7382156	None:intergenic
GAGGGCCTAACCTTATGCTA+CGG	0.624819	8.3:+7382714	MS.gene035324:CDS
AGGTAGGAAACTGTGAAAGA+TGG	0.624924	8.3:-7382029	None:intergenic
GGCTATTAAAGTTATATCAG+GGG	0.627367	8.3:+7382990	MS.gene035324:CDS
ACGACTTCGTTTCAATACCC+CGG	0.629824	8.3:+7382100	MS.gene035324:CDS
AGTTGAGAAGAGCTCTGAGA+CGG	0.630444	8.3:-7381917	None:intergenic
AGGCTTACACGAAGGAAACG+AGG	0.635953	8.3:-7382311	None:intergenic
TCTGGTCAATGGAGAAACCG+TGG	0.643046	8.3:-7382157	None:intergenic
GGCTTACACGAAGGAAACGA+GGG	0.649598	8.3:-7382310	None:intergenic
GATACAATCCATCATTCGCA+GGG	0.650640	8.3:+7382178	MS.gene035324:CDS
AACAGTATCGGGTTTCTCCG+GGG	0.654436	8.3:-7382117	None:intergenic
GTTGATGCCTTGAAGAACTG+GGG	0.672967	8.3:+7382656	MS.gene035324:CDS
GTTTGTTGAGGCTTACACGA+AGG	0.677380	8.3:-7382319	None:intergenic
GGGGTTTGAGACGAAAACGA+CGG	0.698254	8.3:-7382204	None:intergenic
GGTGTGGTTGCAGATGAAGG+AGG	0.735727	8.3:-7381956	None:intergenic
TTGATCTGAATCTGAAATGG+CGG	0.739869	8.3:-7382006	None:intergenic
AAGTTGTTGAGAGAGCGGTG+TGG	0.791544	8.3:-7381972	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AATTTTTTCATCTGTTTTGA+GGG	+	chr8.3:7382526-7382545	MS.gene035324:CDS	20.0%
!!!	ATTTTAACTGCATTTAAAAG+AGG	+	chr8.3:7382695-7382714	MS.gene035324:CDS	20.0%
!!!	TAATTTTTTCATCTGTTTTG+AGG	+	chr8.3:7382525-7382544	MS.gene035324:CDS	20.0%
!!!	TTTTAACTGCATTTAAAAGA+GGG	+	chr8.3:7382696-7382715	MS.gene035324:CDS	20.0%
!	AACTCATCCTTCAAATAAAA+TGG	-	chr8.3:7382926-7382945	None:intergenic	25.0%
!	ACACAAAAATTGTAACTAGA+AGG	-	chr8.3:7382587-7382606	None:intergenic	25.0%
!	ACAGATGAAAAAATTACAGA+AGG	-	chr8.3:7382521-7382540	None:intergenic	25.0%
!	ATCAAGCAAGAATTTCAAAT+TGG	-	chr8.3:7382453-7382472	None:intergenic	25.0%
!	TCAAGCAAGAATTTCAAATT+GGG	-	chr8.3:7382452-7382471	None:intergenic	25.0%
!	TGGCTATTAAAGTTATATCA+GGG	+	chr8.3:7382989-7383008	MS.gene035324:CDS	25.0%
!	TTCTTACCAATTCAAAAGTA+GGG	-	chr8.3:7382352-7382371	None:intergenic	25.0%
!	TTGGCTATTAAAGTTATATC+AGG	+	chr8.3:7382988-7383007	MS.gene035324:CDS	25.0%
!!!	ATCAATAGCTTTTTTATCAG+AGG	-	chr8.3:7382384-7382403	None:intergenic	25.0%
!!!	CTTCAATTTTTAGCTTCTAA+AGG	+	chr8.3:7382248-7382267	MS.gene035324:CDS	25.0%
!!!	TCAATAGCTTTTTTATCAGA+GGG	-	chr8.3:7382383-7382402	None:intergenic	25.0%
	CTTCTTACCAATTCAAAAGT+AGG	-	chr8.3:7382353-7382372	None:intergenic	30.0%
	GAAGCTAAAAATTGAAGCTT+TGG	-	chr8.3:7382245-7382264	None:intergenic	30.0%
	GCTATTAAAGTTATATCAGG+GGG	+	chr8.3:7382991-7383010	MS.gene035324:CDS	30.0%
	GGCTATTAAAGTTATATCAG+GGG	+	chr8.3:7382990-7383009	MS.gene035324:CDS	30.0%
	TTGAAATTCTTGCTTGATAC+TGG	+	chr8.3:7382455-7382474	MS.gene035324:CDS	30.0%
!	AAATTGAAGCTTTGGCAAAA+TGG	-	chr8.3:7382237-7382256	None:intergenic	30.0%
!	TTTGGCAAAATGGATTTGAT+GGG	-	chr8.3:7382227-7382246	None:intergenic	30.0%
!!	AACTGCACCATTTTATTTGA+AGG	+	chr8.3:7382916-7382935	MS.gene035324:CDS	30.0%
!!	CATTATCCCTACTTTTGAAT+TGG	+	chr8.3:7382343-7382362	MS.gene035324:CDS	30.0%
!!!	CAATTTTTGTGTAGCTTTGT+TGG	+	chr8.3:7382595-7382614	MS.gene035324:CDS	30.0%
	AAAAAGGCGATAACAGTATC+GGG	-	chr8.3:7382131-7382150	None:intergenic	35.0%
	ATAAGCCGAAATTGTTAGTG+AGG	-	chr8.3:7382052-7382071	None:intergenic	35.0%
	ATCCAGTATCTTCTTTCCAA+AGG	+	chr8.3:7382869-7382888	MS.gene035324:CDS	35.0%
	ATCCTTCTTCATCAAACCTT+TGG	-	chr8.3:7382888-7382907	None:intergenic	35.0%
	ATTAAAGTTATATCAGGGGG+AGG	+	chr8.3:7382994-7383013	MS.gene035324:CDS	35.0%
	GAAAAAGGCGATAACAGTAT+CGG	-	chr8.3:7382132-7382151	None:intergenic	35.0%
	TCCTACCTCACTAACAATTT+CGG	+	chr8.3:7382044-7382063	MS.gene035324:CDS	35.0%
	TCGGACTTAGTATAGAGAAA+AGG	+	chr8.3:7382825-7382844	MS.gene035324:CDS	35.0%
	TGGAGGAGATTAAGGAATTA+GGG	+	chr8.3:7382555-7382574	MS.gene035324:CDS	35.0%
	TGGTTGATCTGAATCTGAAA+TGG	-	chr8.3:7382012-7382031	None:intergenic	35.0%
	TTAAAGTTATATCAGGGGGA+GGG	+	chr8.3:7382995-7383014	MS.gene035324:CDS	35.0%
	TTCCAAAGGTTTGATGAAGA+AGG	+	chr8.3:7382883-7382902	MS.gene035324:CDS	35.0%
!	AACCTTTGGAAAGAAGATAC+TGG	-	chr8.3:7382874-7382893	None:intergenic	35.0%
!	AAGGTATGTGAATCGTTTTG+AGG	+	chr8.3:7382955-7382974	MS.gene035324:CDS	35.0%
!	CTTTGGCAAAATGGATTTGA+TGG	-	chr8.3:7382228-7382247	None:intergenic	35.0%
!	GAAGGAGGTAACTACATTTT+GGG	-	chr8.3:7381944-7381963	None:intergenic	35.0%
!	GGATTTAGTGATAGCCTTTT+TGG	-	chr8.3:7382621-7382640	None:intergenic	35.0%
!	TAGGGATAATGTGTTTGTTG+AGG	-	chr8.3:7382334-7382353	None:intergenic	35.0%
!	TGAAGGAGGTAACTACATTT+TGG	-	chr8.3:7381945-7381964	None:intergenic	35.0%
!	TTGATCTGAATCTGAAATGG+CGG	-	chr8.3:7382009-7382028	None:intergenic	35.0%
!	TTGGCAAAATGGATTTGATG+GGG	-	chr8.3:7382226-7382245	None:intergenic	35.0%
!!!	TTTTTCATCTGTTTTGAGGG+AGG	+	chr8.3:7382529-7382548	MS.gene035324:CDS	35.0%
	AACGATTCACATACCTTTGC+AGG	-	chr8.3:7382952-7382971	None:intergenic	40.0%
	AAGGTCTGCTTGTAAGCAAA+CGG	-	chr8.3:7382502-7382521	None:intergenic	40.0%
	ACGGTGATGATTATGTCTTC+TGG	-	chr8.3:7382281-7382300	None:intergenic	40.0%
	AGAATAACCCCAGTTCTTCA+AGG	-	chr8.3:7382666-7382685	None:intergenic	40.0%
	AGAGAAAAGGCTTAGTCCAA+GGG	+	chr8.3:7382838-7382857	MS.gene035324:CDS	40.0%
	AGATACAATCCATCATTCGC+AGG	+	chr8.3:7382177-7382196	MS.gene035324:CDS	40.0%
	AGGCTATCACTAAATCCCAA+TGG	+	chr8.3:7382624-7382643	MS.gene035324:CDS	40.0%
	AGGTAGGAAACTGTGAAAGA+TGG	-	chr8.3:7382032-7382051	None:intergenic	40.0%
	ATACTAAGTCCGAAAAGCTC+TGG	-	chr8.3:7382818-7382837	None:intergenic	40.0%
	ATCAACTTTGGCATCCCATT+GGG	-	chr8.3:7382642-7382661	None:intergenic	40.0%
	GATACAATCCATCATTCGCA+GGG	+	chr8.3:7382178-7382197	MS.gene035324:CDS	40.0%
	GGCTATCACTAAATCCCAAT+GGG	+	chr8.3:7382625-7382644	MS.gene035324:CDS	40.0%
	GTGGAGGAGATTAAGGAATT+AGG	+	chr8.3:7382554-7382573	MS.gene035324:CDS	40.0%
	TAACCTTATGCTACGGTCTT+CGG	+	chr8.3:7382721-7382740	MS.gene035324:CDS	40.0%
	TAGAGAAAAGGCTTAGTCCA+AGG	+	chr8.3:7382837-7382856	MS.gene035324:CDS	40.0%
	TTGGATCCAACAACTTGGTT+GGG	+	chr8.3:7382769-7382788	MS.gene035324:CDS	40.0%
	TTTCATGCGACCATCACTAA+TGG	-	chr8.3:7382429-7382448	None:intergenic	40.0%
	TTTCCTGCTACCATTAGTGA+TGG	+	chr8.3:7382416-7382435	MS.gene035324:CDS	40.0%
	TTTGGATCCAACAACTTGGT+TGG	+	chr8.3:7382768-7382787	MS.gene035324:CDS	40.0%
!	AGTTGATGCCTTGAAGAACT+GGG	+	chr8.3:7382655-7382674	MS.gene035324:CDS	40.0%
!	ATAACAGTATCGGGTTTCTC+CGG	-	chr8.3:7382122-7382141	None:intergenic	40.0%
!	GTTCTTCAAGGCATCAACTT+TGG	-	chr8.3:7382654-7382673	None:intergenic	40.0%
!	TCAATGCAGTGATGCGTTTT+TGG	+	chr8.3:7382750-7382769	MS.gene035324:CDS	40.0%
!!	AAGTTGATGCCTTGAAGAAC+TGG	+	chr8.3:7382654-7382673	MS.gene035324:CDS	40.0%
!!	CGTTTTTGGATCCAACAACT+TGG	+	chr8.3:7382764-7382783	MS.gene035324:CDS	40.0%
!!	GATGGATTGTATCTGGTCAA+TGG	-	chr8.3:7382171-7382190	None:intergenic	40.0%
!!	TGCGAATGATGGATTGTATC+TGG	-	chr8.3:7382178-7382197	None:intergenic	40.0%
!!	TGTAGCTTTGTTGGCCAAAA+AGG	+	chr8.3:7382604-7382623	MS.gene035324:CDS	40.0%
!!!	ATCGCCTTTTTCAAAACCCA+CGG	+	chr8.3:7382140-7382159	MS.gene035324:CDS	40.0%
!!!	GAAACCGTGGGTTTTGAAAA+AGG	-	chr8.3:7382147-7382166	None:intergenic	40.0%
!!!	GTATGTGAATCGTTTTGAGG+AGG	+	chr8.3:7382958-7382977	MS.gene035324:CDS	40.0%
	AAGGATCCCAACCAAGTTGT+TGG	-	chr8.3:7382778-7382797	None:intergenic	45.0%
	ACGACTTCGTTTCAATACCC+CGG	+	chr8.3:7382100-7382119	MS.gene035324:CDS	45.0%
	AGAGCAAGTTGTTGAGAGAG+CGG	-	chr8.3:7381980-7381999	None:intergenic	45.0%
	AGGATGAGTTGTTCCTGCAA+AGG	+	chr8.3:7382936-7382955	MS.gene035324:CDS	45.0%
	CATCAACTTTGGCATCCCAT+TGG	-	chr8.3:7382643-7382662	None:intergenic	45.0%
	GAAGACCGTAGCATAAGGTT+AGG	-	chr8.3:7382722-7382741	None:intergenic	45.0%
	GCCGAAATTGTTAGTGAGGT+AGG	-	chr8.3:7382048-7382067	None:intergenic	45.0%
	GTTGATGCCTTGAAGAACTG+GGG	+	chr8.3:7382656-7382675	MS.gene035324:CDS	45.0%
	TACTGGATAACTGAAGCCCT+TGG	-	chr8.3:7382857-7382876	None:intergenic	45.0%
	TTGGGATCCTTTATTGCTCC+TGG	+	chr8.3:7382787-7382806	MS.gene035324:CDS	45.0%
!	GTTTGTTGAGGCTTACACGA+AGG	-	chr8.3:7382322-7382341	None:intergenic	45.0%
!	TAACAGTATCGGGTTTCTCC+GGG	-	chr8.3:7382121-7382140	None:intergenic	45.0%
!!	AGTTGAGAAGAGCTCTGAGA+CGG	-	chr8.3:7381920-7381939	None:intergenic	45.0%
!!!	GTTTTGAGGAGGAAGCATCT+TGG	+	chr8.3:7382969-7382988	MS.gene035324:CDS	45.0%
	AAGTTGTTGAGAGAGCGGTG+TGG	-	chr8.3:7381975-7381994	None:intergenic	50.0%
	ACGAAGGAAACGAGGGTTTC+TGG	-	chr8.3:7382306-7382325	None:intergenic	50.0%
	AGGCTTACACGAAGGAAACG+AGG	-	chr8.3:7382314-7382333	None:intergenic	50.0%
	CGACCATCACTAATGGTAGC+AGG	-	chr8.3:7382422-7382441	None:intergenic	50.0%
	CTGGTCAATGGAGAAACCGT+GGG	-	chr8.3:7382159-7382178	None:intergenic	50.0%
	GAGGGCCTAACCTTATGCTA+CGG	+	chr8.3:7382714-7382733	MS.gene035324:CDS	50.0%
	GGCTTACACGAAGGAAACGA+GGG	-	chr8.3:7382313-7382332	None:intergenic	50.0%
	TCTGGTCAATGGAGAAACCG+TGG	-	chr8.3:7382160-7382179	None:intergenic	50.0%
	TGTCCGAAGACCGTAGCATA+AGG	-	chr8.3:7382727-7382746	None:intergenic	50.0%
!	AACAGTATCGGGTTTCTCCG+GGG	-	chr8.3:7382120-7382139	None:intergenic	50.0%
!	GGGGTTTGAGACGAAAACGA+CGG	-	chr8.3:7382207-7382226	None:intergenic	50.0%
!	GGGTTTGAGACGAAAACGAC+GGG	-	chr8.3:7382206-7382225	None:intergenic	50.0%
!!	GAAACGAGGGTTTCTGGTCA+CGG	-	chr8.3:7382300-7382319	None:intergenic	50.0%
!!!	ATCTGTTTTGAGGGAGGCTG+TGG	+	chr8.3:7382535-7382554	MS.gene035324:CDS	50.0%
	AGCGGTGTGGTTGCAGATGA+AGG	-	chr8.3:7381962-7381981	None:intergenic	55.0%
	GGAGGCTGTGGAGGAGATTA+AGG	+	chr8.3:7382547-7382566	MS.gene035324:CDS	55.0%
	GGTGTGGTTGCAGATGAAGG+AGG	-	chr8.3:7381959-7381978	None:intergenic	55.0%
!	CTGGCAGCACCAGAGCTTTT+CGG	+	chr8.3:7382806-7382825	MS.gene035324:CDS	55.0%
!	GGTGCTGCCAGGAGCAATAA+AGG	-	chr8.3:7382797-7382816	None:intergenic	55.0%
!!	TGAGAAGAGCTCTGAGACGG+TGG	-	chr8.3:7381917-7381936	None:intergenic	55.0%
!!!	TGTTTTGAGGGAGGCTGTGG+AGG	+	chr8.3:7382538-7382557	MS.gene035324:CDS	55.0%
	GACGGGATCCCTGCGAATGA+TGG	-	chr8.3:7382189-7382208	None:intergenic	60.0%
!!	CGAAAAGCTCTGGTGCTGCC+AGG	-	chr8.3:7382808-7382827	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.3	gene	7381903	7383033	7381903	ID=MS.gene035324
chr8.3	mRNA	7381903	7383033	7381903	ID=MS.gene035324.t1;Parent=MS.gene035324
chr8.3	exon	7381903	7383033	7381903	ID=MS.gene035324.t1.exon1;Parent=MS.gene035324.t1
chr8.3	CDS	7381903	7383033	7381903	ID=cds.MS.gene035324.t1;Parent=MS.gene035324.t1

Gene Sequence

>MS.gene035324

ATGATTCACTGCCACCGTCTCAGAGCTCTTCTCAACTTCCCAAAATGTAGTTACCTCCTTCATCTGCAACCACACCGCTCTCTCAACAACTTGCTCTTCTCTACCGCCATTTCAGATTCAGATCAACCATCTTTCACAGTTTCCTACCTCACTAACAATTTCGGCTTATCTTCACAAGATGCTCTCAAAGCGTCTAAACGACTTCGTTTCAATACCCCGGAGAAACCCGATACTGTTATCGCCTTTTTCAAAACCCACGGTTTCTCCATTGACCAGATACAATCCATCATTCGCAGGGATCCCGTCGTTTTCGTCTCAAACCCCATCAAATCCATTTTGCCAAAGCTTCAATTTTTAGCTTCTAAAGGCGTTTCTCCAGAAGACATAATCATCACCGTGACCAGAAACCCTCGTTTCCTTCGTGTAAGCCTCAACAAACACATTATCCCTACTTTTGAATTGGTAAGAAGTTTCTGTCCCTCTGATAAAAAAGCTATTGATTGTGTAATTGCATTTCCTGCTACCATTAGTGATGGTCGCATGAAACCCAATTTGAAATTCTTGCTTGATACTGGTGTCACTCGTTCAAGTATTTACCGTTTGCTTACAAGCAGACCTTCTGTAATTTTTTCATCTGTTTTGAGGGAGGCTGTGGAGGAGATTAAGGAATTAGGGTTTCATCCTTCTAGTTACAATTTTTGTGTAGCTTTGTTGGCCAAAAAGGCTATCACTAAATCCCAATGGGATGCCAAAGTTGATGCCTTGAAGAACTGGGGTTATTCTGAAGATGCAATTTTAACTGCATTTAAAAGAGGGCCTAACCTTATGCTACGGTCTTCGGACAAACTCAATGCAGTGATGCGTTTTTGGATCCAACAACTTGGTTGGGATCCTTTATTGCTCCTGGCAGCACCAGAGCTTTTCGGACTTAGTATAGAGAAAAGGCTTAGTCCAAGGGCTTCAGTTATCCAGTATCTTCTTTCCAAAGGTTTGATGAAGAAGGATGCTAGCTTAACTGCACCATTTTATTTGAAGGATGAGTTGTTCCTGCAAAGGTATGTGAATCGTTTTGAGGAGGAAGCATCTTGGCTATTAAAGTTATATCAGGGGGAGGGTGCTCGCATTCGCTGA

Protein sequence

>MS.gene035324.t1

MIHCHRLRALLNFPKCSYLLHLQPHRSLNNLLFSTAISDSDQPSFTVSYLTNNFGLSSQDALKASKRLRFNTPEKPDTVIAFFKTHGFSIDQIQSIIRRDPVVFVSNPIKSILPKLQFLASKGVSPEDIIITVTRNPRFLRVSLNKHIIPTFELVRSFCPSDKKAIDCVIAFPATISDGRMKPNLKFLLDTGVTRSSIYRLLTSRPSVIFSSVLREAVEEIKELGFHPSSYNFCVALLAKKAITKSQWDAKVDALKNWGYSEDAILTAFKRGPNLMLRSSDKLNAVMRFWIQQLGWDPLLLLAAPELFGLSIEKRLSPRASVIQYLLSKGLMKKDASLTAPFYLKDELFLQRYVNRFEEEASWLLKLYQGEGARIR