AlfalfaGEDB | MS.gene073434

M. sativa cultivar XinJiangDaYe / MS.gene073434

KEGG: K15032
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF02536.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073434.t1	XP_013463341.1	85.6	403	56	2	1	402	1	402	1.10E-163	586.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073434.t1	A0A072V6Y3	85.6	403	56	2	1	402	1	402	8.0e-164	586.3

TFs/TRs:

Gene ID	Type	Classification
MS.gene073434.t1	TR	mTERF

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050426	MS.gene073434	-0.808605	2.85E-50	-1.69E-46
MS.gene050670	MS.gene073434	0.835852	1.32E-56	-1.69E-46
MS.gene051525	MS.gene073434	0.816941	4.27E-52	-1.69E-46
MS.gene051582	MS.gene073434	0.828371	9.33E-55	-1.69E-46
MS.gene052128	MS.gene073434	-0.80586	1.09E-49	-1.69E-46
MS.gene052188	MS.gene073434	0.809092	2.24E-50	-1.69E-46
MS.gene052340	MS.gene073434	0.801848	7.42E-49	-1.69E-46
MS.gene055539	MS.gene073434	0.828995	6.59E-55	-1.69E-46
MS.gene05553	MS.gene073434	0.821744	3.43E-53	-1.69E-46
MS.gene05556	MS.gene073434	0.817753	2.80E-52	-1.69E-46
MS.gene056407	MS.gene073434	0.832268	1.04E-55	-1.69E-46
MS.gene057396	MS.gene073434	0.826044	3.37E-54	-1.69E-46
MS.gene058276	MS.gene073434	0.805637	1.21E-49	-1.69E-46
MS.gene058700	MS.gene073434	0.817722	2.85E-52	-1.69E-46
MS.gene05907	MS.gene073434	0.815113	1.09E-51	-1.69E-46
MS.gene059141	MS.gene073434	0.805583	1.24E-49	-1.69E-46
MS.gene059420	MS.gene073434	0.806104	9.67E-50	-1.69E-46
MS.gene060403	MS.gene073434	0.825392	4.81E-54	-1.69E-46
MS.gene061159	MS.gene073434	0.827788	1.29E-54	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene073434	MS.gene52433	PPI
MS.gene073434	MS.gene68900	PPI
MS.gene073373	MS.gene073434	PPI
MS.gene073434	MS.gene52395	PPI
MS.gene073434	MS.gene035324	PPI
MS.gene073434	MS.gene00282	PPI
MS.gene073434	MS.gene073378	PPI
MS.gene52395	MS.gene073434	PPI
MS.gene073434	MS.gene00383	PPI
MS.gene073434	MS.gene52434	PPI
MS.gene035324	MS.gene073434	PPI
MS.gene073434	MS.gene073373	PPI
MS.gene073434	MS.gene58655	PPI
MS.gene073434	MS.gene52432	PPI
MS.gene073434	MS.gene041550	PPI
MS.gene073434	MS.gene00324	PPI
MS.gene073434	MS.gene004589	PPI
MS.gene073434	MS.gene52427	PPI
MS.gene004590	MS.gene073434	PPI
MS.gene073434	MS.gene073371	PPI
MS.gene073434	MS.gene00284	PPI
MS.gene073434	MS.gene00286	PPI
MS.gene073434	MS.gene00327	PPI
MS.gene073434	MS.gene036497	PPI
MS.gene073434	MS.gene52392	PPI
MS.gene073434	MS.gene52431	PPI
MS.gene073434	MS.gene68901	PPI
MS.gene004585	MS.gene073434	PPI
MS.gene073434	MS.gene00381	PPI
MS.gene073434	MS.gene073372	PPI
MS.gene073434	MS.gene004588	PPI
MS.gene073434	MS.gene004545	PPI
MS.gene073434	MS.gene073433	PPI
MS.gene073434	MS.gene52426	PPI
MS.gene073434	MS.gene004581	PPI
MS.gene073434	MS.gene073379	PPI
MS.gene073434	MS.gene00321	PPI
MS.gene004543	MS.gene073434	PPI
MS.gene00326	MS.gene073434	PPI
MS.gene073434	MS.gene004587	PPI
MS.gene073434	MS.gene00385	PPI
MS.gene073434	MS.gene004540	PPI
MS.gene073434	MS.gene004590	PPI
MS.gene073434	MS.gene58656	PPI
MS.gene073434	MS.gene00322	PPI
MS.gene073434	MS.gene004583	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073434.t1	MTR_2g437990	86.849	403	51	2	1	402	1	402	0.0	704
MS.gene073434.t1	MTR_2g076320	85.112	403	59	1	1	402	1	403	0.0	682
MS.gene073434.t1	MTR_2g438010	79.156	403	83	1	1	402	21	423	0.0	643
MS.gene073434.t1	MTR_2g437120	78.947	399	75	3	1	394	1	395	0.0	618
MS.gene073434.t1	MTR_2g437150	73.086	405	101	3	1	397	1	405	0.0	582
MS.gene073434.t1	MTR_2g437170	72.927	410	101	4	1	400	1	410	0.0	580
MS.gene073434.t1	MTR_2g437940	74.693	407	65	4	1	402	1	374	0.0	580
MS.gene073434.t1	MTR_2g437960	70.617	405	115	2	1	401	1	405	0.0	561
MS.gene073434.t1	MTR_2g437960	70.720	403	114	2	1	399	1	403	0.0	559
MS.gene073434.t1	MTR_2g437160	70.426	399	112	4	1	395	12	408	0.0	555
MS.gene073434.t1	MTR_2g437180	69.154	402	112	3	1	397	1	395	0.0	533
MS.gene073434.t1	MTR_2g437100	69.948	386	109	2	4	382	10	395	0.0	523
MS.gene073434.t1	MTR_2g437200	64.675	385	97	3	33	382	18	398	3.48e-165	469
MS.gene073434.t1	MTR_2g437240	62.211	389	110	2	48	401	31	417	8.63e-162	461
MS.gene073434.t1	MTR_2g438020	62.532	387	107	3	48	399	70	453	2.82e-161	462
MS.gene073434.t1	MTR_2g437130	63.043	368	127	3	31	398	29	387	4.96e-157	448
MS.gene073434.t1	MTR_2g436440	52.717	368	167	2	27	394	28	388	1.52e-127	373
MS.gene073434.t1	MTR_2g437080	52.762	362	164	2	31	392	26	380	1.80e-127	372
MS.gene073434.t1	MTR_2g437020	53.279	366	161	4	27	390	21	378	7.50e-125	366
MS.gene073434.t1	MTR_2g437060	51.515	363	169	2	28	390	38	393	2.37e-120	355
MS.gene073434.t1	MTR_2g437040	51.515	363	169	2	32	394	27	382	1.27e-118	350
MS.gene073434.t1	MTR_2g437030	49.448	362	176	2	33	394	114	468	5.39e-113	338
MS.gene073434.t1	MTR_2g436400	49.711	346	167	2	41	386	43	381	1.72e-111	332
MS.gene073434.t1	MTR_2g436460	51.862	349	158	6	38	385	40	379	3.90e-106	318
MS.gene073434.t1	MTR_2g437260	46.389	360	184	5	30	387	19	371	1.15e-105	317
MS.gene073434.t1	MTR_4g119550	45.977	348	182	3	44	390	46	388	2.64e-105	316
MS.gene073434.t1	MTR_4g120380	47.368	342	167	3	42	379	37	369	5.31e-100	302
MS.gene073434.t1	MTR_4g119580	46.221	344	172	3	40	379	35	369	9.83e-97	294
MS.gene073434.t1	MTR_4g120380	47.988	323	155	3	42	360	37	350	5.48e-95	291
MS.gene073434.t1	MTR_2g437160	59.149	235	84	3	165	395	91	317	1.51e-89	273
MS.gene073434.t1	MTR_2g437160	48.548	241	90	9	1	219	12	240	7.35e-52	176
MS.gene073434.t1	MTR_2g019840	41.299	385	191	9	22	387	8	376	1.31e-83	260
MS.gene073434.t1	MTR_2g019810	45.075	335	173	6	51	382	33	359	1.74e-81	254
MS.gene073434.t1	MTR_2g437090	53.216	171	80	0	225	395	1	171	1.54e-59	191
MS.gene073434.t1	MTR_3g450500	31.044	364	241	4	24	379	8	369	1.70e-51	177
MS.gene073434.t1	MTR_4g119570	38.400	250	118	2	129	378	14	227	5.79e-47	160
MS.gene073434.t1	MTR_4g007490	29.867	375	248	7	10	379	3	367	1.03e-45	161
MS.gene073434.t1	MTR_4g049400	54.000	150	68	1	1	149	1	150	1.30e-43	152
MS.gene073434.t1	MTR_2g436370	48.936	141	70	1	41	181	40	178	5.05e-37	134
MS.gene073434.t1	MTR_8g081000	28.477	302	212	2	80	379	85	384	2.03e-32	126
MS.gene073434.t1	MTR_8g081000	28.477	302	212	2	80	379	85	384	2.67e-32	126
MS.gene073434.t1	MTR_8g081000	26.994	326	233	3	80	402	85	408	2.94e-32	126
MS.gene073434.t1	MTR_8g080990	28.188	298	210	2	81	376	73	368	3.50e-30	120
MS.gene073434.t1	MTR_3g085240	55.556	90	23	1	284	373	176	248	3.51e-22	95.1
MS.gene073434.t1	MTR_3g085240	43.243	148	65	7	28	172	40	171	1.73e-19	87.8
MS.gene073434.t1	MTR_2g436380	55.000	60	27	0	225	284	1	60	1.52e-15	77.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073434.t1	AT5G07900	33.434	332	216	4	51	379	70	399	2.47e-55	188
MS.gene073434.t1	AT1G21150	30.130	385	253	6	5	377	4	384	8.72e-52	178
MS.gene073434.t1	AT1G21150	30.130	385	253	6	5	377	68	448	4.44e-51	178
MS.gene073434.t1	AT1G21150	31.098	328	221	3	53	377	23	348	1.72e-49	171
MS.gene073434.t1	AT1G61980	29.167	360	197	8	51	365	53	399	8.83e-36	136
MS.gene073434.t1	AT1G61980	29.167	360	197	8	51	365	53	399	8.83e-36	136
MS.gene073434.t1	AT1G61980	29.167	360	197	8	51	365	53	399	8.83e-36	136
MS.gene073434.t1	AT1G61990	29.248	359	203	7	51	370	53	399	3.96e-33	129
MS.gene073434.t1	AT1G61990	29.248	359	203	7	51	370	53	399	3.96e-33	129
MS.gene073434.t1	AT1G61970	27.451	357	207	8	51	365	53	399	6.30e-33	128
MS.gene073434.t1	AT1G61970	27.451	357	207	8	51	365	53	399	6.30e-33	128
MS.gene073434.t1	AT1G61970	27.451	357	207	8	51	365	53	399	6.30e-33	128
MS.gene073434.t1	AT1G61970	27.451	357	207	8	51	365	53	399	6.30e-33	128
MS.gene073434.t1	AT1G61970	27.451	357	207	8	51	365	53	399	6.30e-33	128
MS.gene073434.t1	AT1G61970	27.451	357	207	8	51	365	53	399	6.30e-33	128
MS.gene073434.t1	AT1G61970	27.451	357	207	8	51	365	53	399	6.30e-33	128
MS.gene073434.t1	AT5G64950	28.877	374	255	7	15	379	4	375	5.97e-30	119
MS.gene073434.t1	AT3G46950	28.044	271	183	4	30	297	30	291	1.47e-25	108
MS.gene073434.t1	AT1G61960	30.556	252	156	4	51	294	53	293	1.53e-25	108
MS.gene073434.t1	AT1G62120	27.356	329	198	7	51	342	57	381	2.59e-25	107
MS.gene073434.t1	AT1G62085	29.249	253	159	4	51	294	56	297	1.58e-22	99.4
MS.gene073434.t1	AT1G62085	29.249	253	159	4	51	294	56	297	1.58e-22	99.4
MS.gene073434.t1	AT1G62110	28.346	254	162	4	51	295	53	295	3.44e-22	98.6
MS.gene073434.t1	AT1G62150	28.016	257	157	6	51	294	59	300	8.14e-21	94.4
MS.gene073434.t1	AT5G23930	22.922	397	218	10	23	342	23	408	1.32e-20	93.6
MS.gene073434.t1	AT1G62010	24.183	306	183	5	77	342	63	359	6.63e-19	88.6

Find 58 sgRNAs with CRISPR-Local

Find 88 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATCAATTTGATGTCTGATTT+TGG	0.116384	2.4:-53792519	MS.gene073434:CDS
TCCTACCTTATCAACAATTT+TGG	0.146770	2.4:-53792945	MS.gene073434:CDS
TTTCTTATAGTTTACCTAAA+AGG	0.248707	2.4:-53792149	MS.gene073434:CDS
TTGGCGGAAGTTAAGTGTTT+AGG	0.263810	2.4:-53792420	MS.gene073434:CDS
ATAACTGAATCAGGATTATC+TGG	0.265371	2.4:+53792864	None:intergenic
ATGCTGCATTTGAGTGAAAA+TGG	0.281235	2.4:+53793011	None:intergenic
TGGCGGAAGTTAAGTGTTTA+GGG	0.315068	2.4:-53792419	MS.gene073434:CDS
AAGCTGTTATTCGAGTATTT+AGG	0.318007	2.4:-53792284	MS.gene073434:CDS
AAATGATTTGATTAAGTCAT+TGG	0.342453	2.4:-53792439	MS.gene073434:CDS
TGAGACATAAAACAAGATTC+TGG	0.344142	2.4:+53793081	None:intergenic
TTGCTAGACTGCTTCTTAGA+AGG	0.348343	2.4:-53792479	MS.gene073434:CDS
AATGTATGAGTAAAATACTT+TGG	0.370949	2.4:-53792350	MS.gene073434:CDS
TTCAATTGATAAGATTAATC+TGG	0.385597	2.4:-53792238	MS.gene073434:CDS
ATCAGATGAAGAAGCACCTT+TGG	0.404344	2.4:+53792719	None:intergenic
AAACTACTTTGTAAAATTTG+AGG	0.407296	2.4:+53792672	None:intergenic
AACTACTTTGTAAAATTTGA+GGG	0.411226	2.4:+53792673	None:intergenic
TTGGGTTAATCAAATGGGTT+GGG	0.420431	2.4:-53792205	MS.gene073434:CDS
TCATTTGAACAAAATATAGA+TGG	0.424258	2.4:+53792456	None:intergenic
AATTGCAAAACTGAGGCTCT+TGG	0.425012	2.4:+53792120	None:intergenic
GCAAACAATGGTATCCTTGT+CGG	0.427133	2.4:+53792599	None:intergenic
AGATCAATACATTACACATT+TGG	0.428401	2.4:+53791915	None:intergenic
ATGTATGAGTAAAATACTTT+GGG	0.434480	2.4:-53792349	MS.gene073434:CDS
AAGAAGGTGATAACTGAATC+AGG	0.441680	2.4:+53792855	None:intergenic
GTCCGAAAAGCGGTTGTTGA+AGG	0.442684	2.4:+53792390	None:intergenic
TCAAATGGGTTGGGATCCCT+TGG	0.453367	2.4:-53792196	MS.gene073434:CDS
TTTGGGTTAATCAAATGGGT+TGG	0.454317	2.4:-53792206	MS.gene073434:CDS
TTTCTTCACAACCCCACAAA+AGG	0.470856	2.4:-53792770	MS.gene073434:CDS
CAAATACAACGGAGAACAAT+GGG	0.473276	2.4:-53791948	MS.gene073434:CDS
GAGACATAAAACAAGATTCT+GGG	0.480009	2.4:+53793082	None:intergenic
TCAATACATTACACATTTGG+TGG	0.494508	2.4:+53791918	None:intergenic
AAACTATAAGAAAACATAAG+TGG	0.525922	2.4:+53792159	None:intergenic
ATTAGCCTCTAGAACATGAT+GGG	0.526186	2.4:+53792542	None:intergenic
TACATTACACATTTGGTGGA+TGG	0.530490	2.4:+53791922	None:intergenic
CAAAGCTTTCAACAACAAGC+AGG	0.537532	2.4:-53792901	MS.gene073434:CDS
TGCTGCATTTGAGTGAAAAT+GGG	0.540143	2.4:+53793012	None:intergenic
ATATTCTCAGAATAAGCAAA+TGG	0.549537	2.4:+53792051	None:intergenic
TATTAGCCTCTAGAACATGA+TGG	0.549790	2.4:+53792541	None:intergenic
ATCACCTTCTTTCAAAACCA+TGG	0.553067	2.4:-53792843	MS.gene073434:CDS
ATAAGGTAGGATACAGCAAA+AGG	0.553742	2.4:+53792957	None:intergenic
ACCAAAATTGTTGATAAGGT+AGG	0.556095	2.4:+53792944	None:intergenic
TGATTTGATTAAGTCATTGG+CGG	0.566682	2.4:-53792436	MS.gene073434:CDS
TCCGAAAAGCGGTTGTTGAA+GGG	0.570224	2.4:+53792391	None:intergenic
TGGAGATTTAGTAAGTTCCA+AGG	0.571492	2.4:+53792179	None:intergenic
ATTGAAGTCAACATCAAACT+AGG	0.571733	2.4:+53792255	None:intergenic
GCAAATACAACGGAGAACAA+TGG	0.572984	2.4:-53791949	MS.gene073434:CDS
TTATCCCCATCATGTTCTAG+AGG	0.591171	2.4:-53792547	MS.gene073434:CDS
ATTTCGAATTAAGCAAACAA+TGG	0.591852	2.4:+53792587	None:intergenic
TAACTGAATCAGGATTATCT+GGG	0.600797	2.4:+53792865	None:intergenic
GGAGATTTAGTAAGTTCCAA+GGG	0.618354	2.4:+53792180	None:intergenic
CAAAAGAAATTGCAAAACTG+AGG	0.625549	2.4:+53792113	None:intergenic
TCTAAGAAGCAGTCTAGCAA+TGG	0.630562	2.4:+53792482	None:intergenic
TCATCATCACAAAAGCACCT+TGG	0.652829	2.4:-53792797	MS.gene073434:CDS
AATGAAACTTGCAAATACAA+CGG	0.655557	2.4:-53791959	MS.gene073434:CDS
AACTGAATCAGGATTATCTG+GGG	0.669468	2.4:+53792866	None:intergenic
TTAGCCTCTAGAACATGATG+GGG	0.688598	2.4:+53792543	None:intergenic
GTGAAAATGGGAATGACAAG+TGG	0.688711	2.4:+53793024	None:intergenic
TATCAAAGCAGTCCGAAAAG+CGG	0.690793	2.4:+53792380	None:intergenic
GGTTGTGAAGAAAGTAACCA+AGG	0.719556	2.4:+53792780	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	GATAAAAAATATTCAAACTT+TGG	+	chr2.4:53792284-53792303	None:intergenic	15.0%
!!!	TTTGAATATTTTTTATCCAA+AGG	-	chr2.4:53792287-53792306	MS.gene073434:CDS	15.0%
!!	AAAAACCAAAATTGTTGATA+AGG	+	chr2.4:53792085-53792104	None:intergenic	20.0%
!!	AAACTACTTTGTAAAATTTG+AGG	+	chr2.4:53792353-53792372	None:intergenic	20.0%
!!	AAACTATAAGAAAACATAAG+TGG	+	chr2.4:53792866-53792885	None:intergenic	20.0%
!!	AAATGATTTGATTAAGTCAT+TGG	-	chr2.4:53792583-53792602	MS.gene073434:CDS	20.0%
!!	AACTACTTTGTAAAATTTGA+GGG	+	chr2.4:53792352-53792371	None:intergenic	20.0%
!!	AATGTATGAGTAAAATACTT+TGG	-	chr2.4:53792672-53792691	MS.gene073434:CDS	20.0%
!!	ATGTATGAGTAAAATACTTT+GGG	-	chr2.4:53792673-53792692	MS.gene073434:CDS	20.0%
!!	TCATTTGAACAAAATATAGA+TGG	+	chr2.4:53792569-53792588	None:intergenic	20.0%
!!	TTCAATTGATAAGATTAATC+TGG	-	chr2.4:53792784-53792803	MS.gene073434:CDS	20.0%
!!	TTTCTTATAGTTTACCTAAA+AGG	-	chr2.4:53792873-53792892	MS.gene073434:CDS	20.0%
!!!	AAGTTGATGTTTTTAAGAAA+TGG	-	chr2.4:53792702-53792721	MS.gene073434:CDS	20.0%
!!!	AATTTTTGGGTTAATCAAAT+GGG	-	chr2.4:53792812-53792831	MS.gene073434:CDS	20.0%
!!!	AGTTGATGTTTTTAAGAAAT+GGG	-	chr2.4:53792703-53792722	MS.gene073434:CDS	20.0%
!!!	TATTTTACTCATACATTTCT+TGG	+	chr2.4:53792669-53792688	None:intergenic	20.0%
!!!	TCAAATTTTACAAAGTAGTT+TGG	-	chr2.4:53792352-53792371	MS.gene073434:CDS	20.0%
!	AATGAAACTTGCAAATACAA+CGG	-	chr2.4:53793063-53793082	MS.gene073434:CDS	25.0%
!	ATATTCTCAGAATAAGCAAA+TGG	+	chr2.4:53792974-53792993	None:intergenic	25.0%
!	ATTTCGAATTAAGCAAACAA+TGG	+	chr2.4:53792438-53792457	None:intergenic	25.0%
!	TATTCAGCAATTCAAAAAGA+GGG	+	chr2.4:53792391-53792410	None:intergenic	25.0%
!!	ATCAATTTGATGTCTGATTT+TGG	-	chr2.4:53792503-53792522	MS.gene073434:CDS	25.0%
!!	TTGCAATTTCTTTTGATGAA+AGG	-	chr2.4:53792917-53792936	MS.gene073434:CDS	25.0%
!!!	GAATTTTTGGGTTAATCAAA+TGG	-	chr2.4:53792811-53792830	MS.gene073434:CDS	25.0%
!!!	GTTGATGTTTTTAAGAAATG+GGG	-	chr2.4:53792704-53792723	MS.gene073434:CDS	25.0%
!!!	TAATCTGGTGATGAATTTTT+GGG	-	chr2.4:53792799-53792818	MS.gene073434:CDS	25.0%
!!!	TTAATCTGGTGATGAATTTT+TGG	-	chr2.4:53792798-53792817	MS.gene073434:CDS	25.0%
	AAGCTGTTATTCGAGTATTT+AGG	-	chr2.4:53792738-53792757	MS.gene073434:CDS	30.0%
	ATAACTGAATCAGGATTATC+TGG	+	chr2.4:53792161-53792180	None:intergenic	30.0%
	ATTGAAGTCAACATCAAACT+AGG	+	chr2.4:53792770-53792789	None:intergenic	30.0%
	CAAAAGAAATTGCAAAACTG+AGG	+	chr2.4:53792912-53792931	None:intergenic	30.0%
	CTATTCAGCAATTCAAAAAG+AGG	+	chr2.4:53792392-53792411	None:intergenic	30.0%
	GAGACATAAAACAAGATTCT+GGG	+	chr2.4:53791943-53791962	None:intergenic	30.0%
	TAACTGAATCAGGATTATCT+GGG	+	chr2.4:53792160-53792179	None:intergenic	30.0%
	TCAATACATTACACATTTGG+TGG	+	chr2.4:53793107-53793126	None:intergenic	30.0%
	TGAGACATAAAACAAGATTC+TGG	+	chr2.4:53791944-53791963	None:intergenic	30.0%
	TGATTTGATTAAGTCATTGG+CGG	-	chr2.4:53792586-53792605	MS.gene073434:CDS	30.0%
!	ACCAAAATTGTTGATAAGGT+AGG	+	chr2.4:53792081-53792100	None:intergenic	30.0%
!	CAAGTGGTTGTTGAATTTTA+AGG	+	chr2.4:53791985-53792004	None:intergenic	30.0%
!	CTCTTTTTGAATTGCTGAAT+AGG	-	chr2.4:53792390-53792409	MS.gene073434:CDS	30.0%
!	TCCTACCTTATCAACAATTT+TGG	-	chr2.4:53792077-53792096	MS.gene073434:CDS	30.0%
!	TTCTTTTGATGAAAGGTTTG+CGG	-	chr2.4:53792924-53792943	MS.gene073434:CDS	30.0%
!!	ATGTTTTTAAGAAATGGGGT+TGG	-	chr2.4:53792708-53792727	MS.gene073434:CDS	30.0%
!!!	AAAACCATGGTTTTGAAAGA+AGG	+	chr2.4:53792186-53792205	None:intergenic	30.0%
	AACTGAATCAGGATTATCTG+GGG	+	chr2.4:53792159-53792178	None:intergenic	35.0%
	AAGAAGGTGATAACTGAATC+AGG	+	chr2.4:53792170-53792189	None:intergenic	35.0%
	ATAAGGTAGGATACAGCAAA+AGG	+	chr2.4:53792068-53792087	None:intergenic	35.0%
	ATCACCTTCTTTCAAAACCA+TGG	-	chr2.4:53792179-53792198	MS.gene073434:CDS	35.0%
	ATGCTGCATTTGAGTGAAAA+TGG	+	chr2.4:53792014-53792033	None:intergenic	35.0%
	CAAATACAACGGAGAACAAT+GGG	-	chr2.4:53793074-53793093	MS.gene073434:CDS	35.0%
	CTGGGAGAAAAACAATTTGT+TGG	+	chr2.4:53791925-53791944	None:intergenic	35.0%
	GGAGATTTAGTAAGTTCCAA+GGG	+	chr2.4:53792845-53792864	None:intergenic	35.0%
	TGCTGCATTTGAGTGAAAAT+GGG	+	chr2.4:53792013-53792032	None:intergenic	35.0%
	TGGAGATTTAGTAAGTTCCA+AGG	+	chr2.4:53792846-53792865	None:intergenic	35.0%
	TGTTATCGTGTGAAAAACCA+TGG	+	chr2.4:53792199-53792218	None:intergenic	35.0%
!	CAAGTGTGTTTTCAGCTTTA+AGG	-	chr2.4:53793003-53793022	MS.gene073434:CDS	35.0%
!	TACATTACACATTTGGTGGA+TGG	+	chr2.4:53793103-53793122	None:intergenic	35.0%
!	TTGGGTTAATCAAATGGGTT+GGG	-	chr2.4:53792817-53792836	MS.gene073434:CDS	35.0%
!	TTTGGGTTAATCAAATGGGT+TGG	-	chr2.4:53792816-53792835	MS.gene073434:CDS	35.0%
!!	ATTAGCCTCTAGAACATGAT+GGG	+	chr2.4:53792483-53792502	None:intergenic	35.0%
!!	TATTAGCCTCTAGAACATGA+TGG	+	chr2.4:53792484-53792503	None:intergenic	35.0%
	AATTGCAAAACTGAGGCTCT+TGG	+	chr2.4:53792905-53792924	None:intergenic	40.0%
	CAAAGCTTTCAACAACAAGC+AGG	-	chr2.4:53792121-53792140	MS.gene073434:CDS	40.0%
	CGGAAAAAAAATGCGAGCTT+AGG	-	chr2.4:53792944-53792963	MS.gene073434:CDS	40.0%
	GCAAACAATGGTATCCTTGT+CGG	+	chr2.4:53792426-53792445	None:intergenic	40.0%
	GCAAATACAACGGAGAACAA+TGG	-	chr2.4:53793073-53793092	MS.gene073434:CDS	40.0%
	GGTTGTGAAGAAAGTAACCA+AGG	+	chr2.4:53792245-53792264	None:intergenic	40.0%
	GTGAAAATGGGAATGACAAG+TGG	+	chr2.4:53792001-53792020	None:intergenic	40.0%
	TATCAAAGCAGTCCGAAAAG+CGG	+	chr2.4:53792645-53792664	None:intergenic	40.0%
	TCTAAGAAGCAGTCTAGCAA+TGG	+	chr2.4:53792543-53792562	None:intergenic	40.0%
	TGGCGGAAGTTAAGTGTTTA+GGG	-	chr2.4:53792603-53792622	MS.gene073434:CDS	40.0%
	TTATCCCCATCATGTTCTAG+AGG	-	chr2.4:53792475-53792494	MS.gene073434:CDS	40.0%
	TTGCTAGACTGCTTCTTAGA+AGG	-	chr2.4:53792543-53792562	MS.gene073434:CDS	40.0%
	TTGGCGGAAGTTAAGTGTTT+AGG	-	chr2.4:53792602-53792621	MS.gene073434:CDS	40.0%
	TTTCTTCACAACCCCACAAA+AGG	-	chr2.4:53792252-53792271	MS.gene073434:CDS	40.0%
!	ACTTTGGCAACAACCTTTTG+TGG	+	chr2.4:53792268-53792287	None:intergenic	40.0%
!	CTTTGGCAACAACCTTTTGT+GGG	+	chr2.4:53792267-53792286	None:intergenic	40.0%
!	GCTCTTGGAATGATCCTTTT+AGG	+	chr2.4:53792890-53792909	None:intergenic	40.0%
!	TAGGTTTTCGAAAACCGACA+AGG	-	chr2.4:53792409-53792428	MS.gene073434:CDS	40.0%
!	TTTGGCAACAACCTTTTGTG+GGG	+	chr2.4:53792266-53792285	None:intergenic	40.0%
!!	ATCAGATGAAGAAGCACCTT+TGG	+	chr2.4:53792306-53792325	None:intergenic	40.0%
!!	TCATCATCACAAAAGCACCT+TGG	-	chr2.4:53792225-53792244	MS.gene073434:CDS	40.0%
!!	TTAGCCTCTAGAACATGATG+GGG	+	chr2.4:53792482-53792501	None:intergenic	40.0%
!!!	GTGTGTTTTCAGCTTTAAGG+AGG	-	chr2.4:53793006-53793025	MS.gene073434:CDS	40.0%
	TCCGAAAAGCGGTTGTTGAA+GGG	+	chr2.4:53792634-53792653	None:intergenic	45.0%
!!	ACCCTTCAACAACCGCTTTT+CGG	-	chr2.4:53792630-53792649	MS.gene073434:CDS	45.0%
	GTCCGAAAAGCGGTTGTTGA+AGG	+	chr2.4:53792635-53792654	None:intergenic	50.0%
!!	TCAAATGGGTTGGGATCCCT+TGG	-	chr2.4:53792826-53792845	MS.gene073434:CDS	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.4	gene	53791918	53793126	53791918	ID=MS.gene073434
chr2.4	mRNA	53791918	53793126	53791918	ID=MS.gene073434.t1;Parent=MS.gene073434
chr2.4	exon	53791918	53793126	53791918	ID=MS.gene073434.t1.exon1;Parent=MS.gene073434.t1
chr2.4	CDS	53791918	53793126	53791918	ID=cds.MS.gene073434.t1;Parent=MS.gene073434.t1

Gene Sequence

>MS.gene073434

ATGTCCAACAAATTGTTTTTCTCCCAGAATCTTGTTTTATGTCTCATCACAACAAAATCAACAACCTTAAAATTCAACAACCACTTGTCATTCCCATTTTCACTCAAATGCAGCATCACAACATCTCAATCAGAATCAATCACACAACCTTTTGCTGTATCCTACCTTATCAACAATTTTGGTTTTTCAACTGAATCAGCTCTCAAAGCTTTCAACAACAAGCAGGTTCGTTTCAATACCCCAGATAATCCTGATTCAGTTATCACCTTCTTTCAAAACCATGGTTTTTCACACGATAACATACGCATCATCATCACAAAAGCACCTTGGTTACTTTCTTCACAACCCCACAAAAGGTTGTTGCCAAAGTTTGAATATTTTTTATCCAAAGGTGCTTCTTCATCTGATATTGTTTCATTGTTAACTTCAAACCCTCAAATTTTACAAAGTAGTTTGGAGAAACGAATAATCCCTCTTTTTGAATTGCTGAATAGGTTTTCGAAAACCGACAAGGATACCATTGTTTGCTTAATTCGAAATTCAAGATCATTTACTGTTTATCCCCATCATGTTCTAGAGGCTAATATCAATTTGATGTCTGATTTTGGAGTTTCTGATTCTGCCATTGCTAGACTGCTTCTTAGAAGGCCATCTATATTTTGTTCAAATGATTTGATTAAGTCATTGGCGGAAGTTAAGTGTTTAGGGTTTGACCCTTCAACAACCGCTTTTCGGACTGCTTTGATAGCCAAGAAATGTATGAGTAAAATACTTTGGGATAAGAAAGTTGATGTTTTTAAGAAATGGGGTTGGTCTGATGAAGCTGTTATTCGAGTATTTAGGTGTCAGCCTAGTTTGATGTTGACTTCAATTGATAAGATTAATCTGGTGATGAATTTTTGGGTTAATCAAATGGGTTGGGATCCCTTGGAACTTACTAAATCTCCACTTATGTTTTCTTATAGTTTACCTAAAAGGATCATTCCAAGAGCCTCAGTTTTGCAATTTCTTTTGATGAAAGGTTTGCGGAAAAAAAATGCGAGCTTAGGTAGACCATTTGCTTATTCTGAGAATATGTTCTTGAACAAGTGTGTTTTCAGCTTTAAGGAGGAGTCTGATTATCTGTTGAAGCTATATGACGAAAAAATGAAACTTGCAAATACAACGGAGAACAATGGGATGCCATCCACCAAATGTGTAATGTATTGA

Protein sequence

>MS.gene073434.t1

MSNKLFFSQNLVLCLITTKSTTLKFNNHLSFPFSLKCSITTSQSESITQPFAVSYLINNFGFSTESALKAFNNKQVRFNTPDNPDSVITFFQNHGFSHDNIRIIITKAPWLLSSQPHKRLLPKFEYFLSKGASSSDIVSLLTSNPQILQSSLEKRIIPLFELLNRFSKTDKDTIVCLIRNSRSFTVYPHHVLEANINLMSDFGVSDSAIARLLLRRPSIFCSNDLIKSLAEVKCLGFDPSTTAFRTALIAKKCMSKILWDKKVDVFKKWGWSDEAVIRVFRCQPSLMLTSIDKINLVMNFWVNQMGWDPLELTKSPLMFSYSLPKRIIPRASVLQFLLMKGLRKKNASLGRPFAYSENMFLNKCVFSFKEESDYLLKLYDEKMKLANTTENNGMPSTKCVMY