AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene58655

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene58655.t1 MTR_2g437200 62.716 405 113 8 1 391 1 381 4.65e-156 450
MS.gene58655.t1 MTR_2g437200 79.245 106 22 0 387 492 225 330 3.21e-51 179
MS.gene58655.t1 MTR_2g437240 59.950 397 137 6 1 391 1 381 2.50e-148 431
MS.gene58655.t1 MTR_2g437240 65.094 106 37 0 387 492 225 330 9.14e-40 149
MS.gene58655.t1 MTR_2g438020 78.652 267 54 1 29 292 70 336 1.64e-143 422
MS.gene58655.t1 MTR_2g438020 71.028 107 31 0 387 493 264 370 1.59e-45 166
MS.gene58655.t1 MTR_2g437960 51.872 374 111 7 30 391 53 369 2.89e-108 328
MS.gene58655.t1 MTR_2g437960 73.585 106 28 0 387 492 213 318 2.35e-45 164
MS.gene58655.t1 MTR_2g437960 51.872 374 111 7 30 391 53 369 4.66e-108 328
MS.gene58655.t1 MTR_2g437960 73.585 106 28 0 387 492 213 318 3.60e-45 164
MS.gene58655.t1 MTR_2g437170 48.454 388 127 9 21 391 42 373 2.97e-102 313
MS.gene58655.t1 MTR_2g437170 71.698 106 30 0 387 492 217 322 8.76e-46 165
MS.gene58655.t1 MTR_2g437150 47.938 388 129 9 21 391 42 373 9.32e-101 309
MS.gene58655.t1 MTR_2g437150 71.698 106 30 0 387 492 217 322 8.90e-46 165
MS.gene58655.t1 MTR_2g437120 50.131 383 128 11 16 389 36 364 5.19e-100 307
MS.gene58655.t1 MTR_2g437120 73.585 106 27 1 387 492 211 315 8.15e-43 157
MS.gene58655.t1 MTR_2g437180 47.520 383 130 7 21 391 42 365 4.30e-98 302
MS.gene58655.t1 MTR_2g437180 66.038 106 36 0 387 492 209 314 2.17e-40 150
MS.gene58655.t1 MTR_2g437100 46.907 388 151 8 11 391 39 378 6.27e-98 302
MS.gene58655.t1 MTR_2g437100 66.981 106 35 0 387 492 222 327 1.34e-39 148
MS.gene58655.t1 MTR_2g437160 46.770 387 132 8 21 391 50 378 2.80e-95 295
MS.gene58655.t1 MTR_2g437160 69.811 106 32 0 387 492 222 327 3.21e-45 164
MS.gene58655.t1 MTR_2g437990 46.053 380 129 8 25 389 45 363 6.90e-94 292
MS.gene58655.t1 MTR_2g437990 69.811 106 32 0 387 492 209 314 1.91e-45 165
MS.gene58655.t1 MTR_2g076320 46.400 375 136 7 25 389 45 364 1.02e-93 291
MS.gene58655.t1 MTR_2g076320 67.925 106 34 0 387 492 210 315 4.38e-44 160
MS.gene58655.t1 MTR_2g437260 43.902 410 150 12 1 391 1 349 3.03e-92 286
MS.gene58655.t1 MTR_2g437260 43.396 106 58 2 389 492 193 298 4.57e-23 101
MS.gene58655.t1 MTR_2g438010 43.850 374 147 6 25 389 65 384 4.75e-91 285
MS.gene58655.t1 MTR_2g438010 68.868 106 33 0 387 492 230 335 4.96e-44 161
MS.gene58655.t1 MTR_2g437940 43.548 372 129 10 21 389 42 335 2.65e-75 242
MS.gene58655.t1 MTR_2g437940 73.585 106 28 0 387 492 181 286 2.41e-46 166
MS.gene58655.t1 MTR_2g437130 40.811 370 159 8 25 389 38 352 5.23e-73 236
MS.gene58655.t1 MTR_2g437130 64.151 106 38 0 387 492 198 303 3.80e-40 149
MS.gene58655.t1 MTR_4g119550 47.212 269 106 5 25 292 46 279 1.64e-71 233
MS.gene58655.t1 MTR_4g119550 45.714 105 57 0 387 491 207 311 3.47e-29 119
MS.gene58655.t1 MTR_2g437030 38.320 381 175 8 19 393 115 441 5.57e-69 228
MS.gene58655.t1 MTR_2g437030 55.660 106 47 0 387 492 283 388 1.53e-32 130
MS.gene58655.t1 MTR_2g437080 37.371 388 167 10 19 392 29 354 4.27e-68 224
MS.gene58655.t1 MTR_2g437080 33.716 261 156 7 243 492 48 302 1.02e-34 134
MS.gene58655.t1 MTR_2g436440 37.306 386 182 7 9 388 25 356 1.31e-66 220
MS.gene58655.t1 MTR_2g436440 42.361 144 80 2 352 492 165 308 4.81e-31 124
MS.gene58655.t1 MTR_2g437020 37.226 411 179 10 20 415 29 375 5.86e-66 218
MS.gene58655.t1 MTR_2g437020 63.441 93 34 0 400 492 211 303 6.77e-35 135
MS.gene58655.t1 MTR_2g437040 43.103 290 117 6 8 292 23 269 1.76e-63 211
MS.gene58655.t1 MTR_2g437040 56.364 110 48 0 383 492 193 302 1.68e-33 131
MS.gene58655.t1 MTR_2g437060 37.867 375 173 9 19 387 44 364 1.26e-62 209
MS.gene58655.t1 MTR_2g437060 55.660 106 47 0 387 492 212 317 2.99e-34 133
MS.gene58655.t1 MTR_2g436460 36.702 376 175 9 24 392 41 360 2.98e-56 192
MS.gene58655.t1 MTR_2g436460 52.885 104 48 1 390 492 205 308 1.66e-27 114
MS.gene58655.t1 MTR_2g436400 34.739 403 195 12 21 414 38 381 3.75e-56 192
MS.gene58655.t1 MTR_2g436400 56.311 103 45 0 390 492 207 309 1.21e-34 134
MS.gene58655.t1 MTR_4g120380 39.550 311 129 5 24 322 38 301 2.41e-53 184
MS.gene58655.t1 MTR_4g120380 49.038 104 53 0 383 486 195 298 1.05e-26 111
MS.gene58655.t1 MTR_4g119580 39.298 285 130 4 32 316 46 287 3.72e-53 184
MS.gene58655.t1 MTR_4g119580 41.176 136 73 2 356 486 165 298 2.55e-25 107
MS.gene58655.t1 MTR_4g120380 39.550 311 129 5 24 322 38 301 2.30e-52 183
MS.gene58655.t1 MTR_4g120380 49.038 104 53 0 383 486 195 298 3.82e-26 110
MS.gene58655.t1 MTR_4g120380 27.586 319 168 12 196 492 106 383 1.13e-17 85.5
MS.gene58655.t1 MTR_2g019810 40.741 270 112 6 29 291 30 258 4.16e-48 170
MS.gene58655.t1 MTR_2g019810 48.544 103 47 2 390 492 196 292 2.88e-19 89.7
MS.gene58655.t1 MTR_2g019840 40.221 271 122 6 24 291 37 270 5.78e-47 168
MS.gene58655.t1 MTR_2g019840 47.253 91 47 1 405 495 218 307 3.08e-19 90.1
MS.gene58655.t1 MTR_2g437160 71.154 104 30 0 389 492 133 236 1.50e-45 162
MS.gene58655.t1 MTR_2g437160 40.678 177 76 3 222 391 133 287 3.74e-28 114
MS.gene58655.t1 MTR_2g437160 34.483 203 78 5 21 169 50 251 5.22e-23 100
MS.gene58655.t1 MTR_3g085240 44.856 243 72 7 1 232 21 212 1.77e-42 152
MS.gene58655.t1 MTR_2g436370 37.629 194 84 4 21 212 37 195 3.37e-32 122
MS.gene58655.t1 MTR_3g450500 29.963 267 146 6 32 292 40 271 1.43e-31 125
MS.gene58655.t1 MTR_3g450500 32.000 100 66 1 387 484 197 296 8.55e-12 67.4
MS.gene58655.t1 MTR_4g007490 30.375 293 166 6 32 320 39 297 1.83e-30 122
MS.gene58655.t1 MTR_4g119570 45.205 146 77 2 147 292 21 163 3.94e-29 115
MS.gene58655.t1 MTR_4g119570 48.718 78 40 0 389 466 93 170 3.63e-18 84.0
MS.gene58655.t1 MTR_2g437090 55.056 89 40 0 403 491 1 89 4.07e-29 113
MS.gene58655.t1 MTR_2g437090 32.105 190 92 7 236 415 1 163 9.50e-16 75.5
MS.gene58655.t1 MTR_4g049400 47.656 128 56 3 21 137 37 164 2.40e-28 113
MS.gene58655.t1 MTR_2g437680 72.581 62 16 1 312 372 2 63 6.40e-20 84.3
MS.gene58655.t1 MTR_2g436380 61.404 57 22 0 236 292 1 57 1.12e-16 80.9
MS.gene58655.t1 MTR_2g436380 57.377 61 26 0 403 463 1 61 2.50e-16 79.7
MS.gene58655.t1 MTR_8g081000 23.729 236 144 4 59 292 85 286 1.75e-13 72.8
MS.gene58655.t1 MTR_8g081000 23.729 236 144 4 59 292 85 286 1.87e-13 72.4
MS.gene58655.t1 MTR_8g081000 23.729 236 144 4 59 292 85 286 2.32e-13 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene58655.t1 AT5G07900 28.622 283 157 5 23 292 51 301 6.69e-32 127
MS.gene58655.t1 AT5G07900 33.708 89 58 1 408 495 249 337 1.85e-11 66.2
MS.gene58655.t1 AT1G21150 32.184 261 143 2 32 290 57 285 2.57e-30 122
MS.gene58655.t1 AT1G21150 32.184 261 143 2 32 290 121 349 8.05e-30 122
MS.gene58655.t1 AT1G21150 31.698 265 147 2 28 290 17 249 8.23e-30 120
MS.gene58655.t1 AT3G46950 30.743 296 150 9 6 292 26 275 7.11e-27 113
MS.gene58655.t1 AT1G61990 29.467 319 173 7 7 318 24 297 1.71e-26 112
MS.gene58655.t1 AT1G61990 29.467 319 173 7 7 318 24 297 1.71e-26 112
MS.gene58655.t1 AT1G61960 31.298 262 145 3 32 292 53 280 9.63e-26 110
MS.gene58655.t1 AT1G61980 31.298 262 144 6 32 292 53 279 2.41e-25 108
MS.gene58655.t1 AT1G61980 31.298 262 144 6 32 292 53 279 2.41e-25 108
MS.gene58655.t1 AT1G61980 31.298 262 144 6 32 292 53 279 2.41e-25 108
MS.gene58655.t1 AT1G61970 28.620 297 166 7 7 292 18 279 5.60e-25 107
MS.gene58655.t1 AT1G61970 28.620 297 166 7 7 292 18 279 5.60e-25 107
MS.gene58655.t1 AT1G61970 28.620 297 166 7 7 292 18 279 5.60e-25 107
MS.gene58655.t1 AT1G61970 28.620 297 166 7 7 292 18 279 5.60e-25 107
MS.gene58655.t1 AT1G61970 28.620 297 166 7 7 292 18 279 5.60e-25 107
MS.gene58655.t1 AT1G61970 28.620 297 166 7 7 292 18 279 5.60e-25 107
MS.gene58655.t1 AT1G61970 28.620 297 166 7 7 292 18 279 5.60e-25 107
MS.gene58655.t1 AT1G62120 31.507 292 161 8 30 318 55 310 1.21e-23 103
MS.gene58655.t1 AT1G62085 30.345 290 163 6 32 318 56 309 1.35e-23 103
MS.gene58655.t1 AT1G62085 30.345 290 163 6 32 318 56 309 1.35e-23 103
MS.gene58655.t1 AT1G62110 30.153 262 149 4 32 292 53 281 3.10e-23 102
MS.gene58655.t1 AT1G62150 27.726 321 173 7 32 349 59 323 3.40e-22 99.8
MS.gene58655.t1 AT5G23930 27.273 264 147 7 32 292 56 277 4.11e-15 78.2
MS.gene58655.t1 AT5G64950 22.796 329 204 7 24 344 32 318 5.00e-14 74.3
MS.gene58655.t1 AT1G56380 32.394 142 89 2 32 167 17 157 6.05e-12 67.8
MS.gene58655.t1 AT1G56380 32.394 142 89 2 32 167 28 168 6.71e-12 67.8

Find 86 sgRNAs with CRISPR-Local

Find 259 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAATTTGATGACTGATTT+TGG 0.089088 2.3:-53707020 MS.gene58655:CDS
GGTCCTTCATTGGCTACTTT+TGG 0.164539 2.3:-53705889 MS.gene58655:CDS
TTCAATTGATAAGATTAATT+TGG 0.211307 2.3:-53704913 MS.gene58655:CDS
TAGAGGAAGTTAAGTGTTTA+GGG 0.232380 2.3:-53706920 MS.gene58655:CDS
TTGGAGGAAGTTAAAGGTTT+AGG 0.236931 2.3:-53705095 MS.gene58655:CDS
AAGCTAGTTTGTAAAATATC+AGG 0.247708 2.3:+53707173 None:intergenic
TTAGAGGAAGTTAAGTGTTT+AGG 0.252656 2.3:-53706921 MS.gene58655:CDS
GATCCTTCAATCACTACTTT+TGG 0.257134 2.3:-53705068 MS.gene58655:CDS
CTAGAAAGGCCATCTATATT+TGG 0.258714 2.3:-53705961 MS.gene58655:CDS
TTTCTCTGTCGCAATGCTTT+TGG 0.260075 2.3:-53707626 MS.gene58655:CDS
CGGTGCAAGTTGTGTCGTAT+TGG 0.262444 2.3:+53704149 None:intergenic
GAAGTTAAGGGTTTGGGGTT+TGG 0.267974 2.3:-53705910 MS.gene58655:CDS
TGGAGGAAGTTAAAGGTTTA+GGG 0.271068 2.3:-53705094 MS.gene58655:CDS
TTGGAGGAAGTTAAGGGTTT+GGG 0.278438 2.3:-53705916 MS.gene58655:CDS
AAGTCATTGGAGGAAGTTAA+AGG 0.288064 2.3:-53705101 MS.gene58655:CDS
AATTTGGTGGAATAAGTAAA+TGG 0.291352 2.3:+53705548 None:intergenic
GGTGCAAGTTGTGTCGTATT+GGG 0.300702 2.3:+53704150 None:intergenic
TTTGGGGTTTGGTCCTTCAT+TGG 0.311462 2.3:-53705899 MS.gene58655:CDS
TCCTTTGAACAAAATATAGA+TGG 0.321886 2.3:+53705131 None:intergenic
AAAGGATTTGATTAAGTCAT+TGG 0.323129 2.3:-53705114 MS.gene58655:CDS
ATTGAAGCCAACATCAAATA+AGG 0.325234 2.3:+53704930 None:intergenic
AAACTTGCTCAAGAACAATT+TGG 0.328960 2.3:+53705532 None:intergenic
TTGGTCCAACTGGTTTGATT+AGG 0.335285 2.3:-53705942 MS.gene58655:CDS
AACTGGTTTGATTAGGTCAT+TGG 0.344318 2.3:-53705935 MS.gene58655:CDS
AAGCTTAATTCCAAGAACTT+AGG 0.347303 2.3:+53707269 None:intergenic
AAGATGTTATTCGAGCATTT+AGG 0.355683 2.3:-53706785 MS.gene58655:intron
TAGTGGTAACCCTAAGTTCT+TGG 0.369201 2.3:-53707279 MS.gene58655:CDS
TGATTTGATTAAGTCATTAG+AGG 0.371105 2.3:-53706937 MS.gene58655:CDS
CCATCTATATTTGGTCCAAC+TGG 0.377632 2.3:-53705952 MS.gene58655:CDS
AAGAAGTTGAGAACTGAATC+AGG 0.382302 2.3:+53707452 None:intergenic
TAGGTCATTGGAGGAAGTTA+AGG 0.386684 2.3:-53705923 MS.gene58655:CDS
AATTGATATTAGCCACAATA+AGG 0.389243 2.3:+53707036 None:intergenic
AAGTTGACGTCTATAAGAAA+TGG 0.393555 2.3:-53704995 MS.gene58655:CDS
AGCTTAATTCCAAGAACTTA+GGG 0.393617 2.3:+53707270 None:intergenic
TGAAACAATATCAGCACCTT+TGG 0.401691 2.3:+53707211 None:intergenic
TCTTACCTCATCGATAAATT+CGG 0.406419 2.3:-53707536 MS.gene58655:CDS
AGTTGACGTCTATAAGAAAT+GGG 0.412386 2.3:-53704994 MS.gene58655:CDS
TCAAATGGGTTGGGATTCCT+TGG 0.413582 2.3:-53704871 MS.gene58655:CDS
AGGTCATTGGAGGAAGTTAA+GGG 0.415090 2.3:-53705922 MS.gene58655:CDS
GCAGAGAATGATATCCTTGT+CGG 0.415170 2.3:+53707100 None:intergenic
GTCAGAGGTAGAAGCACCTT+TGG 0.417863 2.3:+53707316 None:intergenic
TTGGGTTAATCAAATGGGTT+GGG 0.420431 2.3:-53704880 MS.gene58655:CDS
TCAGATGAACCAAATATAGA+TGG 0.421316 2.3:+53706957 None:intergenic
ATTGGAGGAAGTTAAGGGTT+TGG 0.439996 2.3:-53705917 MS.gene58655:CDS
AATGTATGAGTAAAACATGT+TGG 0.440381 2.3:-53705846 MS.gene58655:CDS
GACATTGTCCGCATGGTTAG+TGG 0.442987 2.3:-53707296 MS.gene58655:CDS
TATCTTCTGATGAAAGTTTG+AGG 0.445106 2.3:-53705595 MS.gene58655:CDS
TTTGGGTTAATCAAATGGGT+TGG 0.454317 2.3:-53704881 MS.gene58655:CDS
GTTTCAGCCTTATTTGATGT+TGG 0.461370 2.3:-53704937 MS.gene58655:CDS
TTGCTAGATTGCTTCTAGAA+AGG 0.472917 2.3:-53705975 MS.gene58655:intron
CCAGTTGGACCAAATATAGA+TGG 0.479635 2.3:+53705952 None:intergenic
TAACTTAAGTCAAAGTTCTT+CGG 0.482478 2.3:+53704129 None:intergenic
TGGAGGAAGTTAAGGGTTTG+GGG 0.488916 2.3:-53705915 MS.gene58655:CDS
ACCCTAAAAGTAGTCGTTGA+AGG 0.504836 2.3:+53706891 None:intergenic
GTCCCAAAAGTAGTGATTGA+AGG 0.505609 2.3:+53705065 None:intergenic
AAGGATCATTCCAAGGGCAT+TGG 0.517902 2.3:-53705626 MS.gene58655:CDS
GCCCCAAAAGTAGCCAATGA+AGG 0.534578 2.3:+53705886 None:intergenic
CTTGCTCAAGAACAATTTGG+TGG 0.537950 2.3:+53705535 None:intergenic
TGGTTTGATTAGGTCATTGG+AGG 0.539142 2.3:-53705932 MS.gene58655:CDS
ATGTATGAGTAAAACATGTT+GGG 0.544119 2.3:-53705845 MS.gene58655:CDS
GTGAAGTGGTAGTAGTGGTA+AGG 0.547397 2.3:+53707573 None:intergenic
TATTGCACAACCAATGCCCT+TGG 0.548759 2.3:+53705616 None:intergenic
TGCAGAAAAGGATCATTCCA+AGG 0.555097 2.3:-53705633 MS.gene58655:intron
TAGCCCACATCGCCTTATTG+TGG 0.556654 2.3:-53707048 MS.gene58655:CDS
TACCTCTGACATTGTCCGCA+TGG 0.562085 2.3:-53707303 MS.gene58655:CDS
AGCTAGTTTGTAAAATATCA+GGG 0.570802 2.3:+53707174 None:intergenic
GGATTTGATTAAGTCATTGG+AGG 0.571043 2.3:-53705111 MS.gene58655:CDS
TAGCCACAATAAGGCGATGT+GGG 0.594917 2.3:+53707045 None:intergenic
ATGAGGTAAGACACAGCGAA+AGG 0.598910 2.3:+53707548 None:intergenic
TTTCTGAAGCAATTTAGCAA+TGG 0.600000 2.3:+53706983 None:intergenic
TGAGGTAAGACACAGCGAAA+GGG 0.607437 2.3:+53707549 None:intergenic
TGTACATTTAACAAGTGCCA+AGG 0.619207 2.3:+53704854 None:intergenic
AGGGTGTGAAGTGGTAGTAG+TGG 0.620465 2.3:+53707568 None:intergenic
AATGACCTAATCAAACCAGT+TGG 0.631699 2.3:+53705937 None:intergenic
GCAGAAAAGGATCATTCCAA+GGG 0.639024 2.3:-53705632 MS.gene58655:intron
CACAGCGAAAGGGTGTGAAG+TGG 0.647943 2.3:+53707559 None:intergenic
GTCGATGTCTTTGAGAAACG+AGG 0.648037 2.3:-53705814 MS.gene58655:intron
ACGTCTATAAGAAATGGGGT+TGG 0.656465 2.3:-53704989 MS.gene58655:CDS
ACATCATCAAAAGAGAACCA+TGG 0.657560 2.3:-53707394 MS.gene58655:CDS
AACCATGCGGACAATGTCAG+AGG 0.657894 2.3:+53707301 None:intergenic
AGAATCCGAATTTATCGATG+AGG 0.666288 2.3:+53707531 None:intergenic
GTATCGCAGGAAAGAAGCCA+TGG 0.666550 2.3:+53707377 None:intergenic
TTAGCCACAATAAGGCGATG+TGG 0.673377 2.3:+53707044 None:intergenic
GTTGACGTCTATAAGAAATG+GGG 0.692031 2.3:-53704993 MS.gene58655:CDS
GATGTTGAGAATATCTGAGT+CGG 0.696789 2.3:+53707412 None:intergenic
TAGGGTTACCACTAACCATG+CGG 0.739529 2.3:+53707288 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATGAGTAAAAAATTTT+GGG - chr2.3:53704926-53704945 MS.gene58655:CDS 10.0%
!!! TATTTATGAGTAAAAAATTT+TGG - chr2.3:53704925-53704944 MS.gene58655:CDS 10.0%
!! GATTAGTAATAAACTAATAA+TGG + chr2.3:53707474-53707493 None:intergenic 15.0%
!! TTCAATTGATAAGATTAATT+TGG - chr2.3:53706863-53706882 MS.gene58655:CDS 15.0%
!!! TACTTATTTTAAAACTAACA+AGG - chr2.3:53706488-53706507 MS.gene58655:intron 15.0%
!!! TTAGTTTTTAAAATTGATAG+AGG - chr2.3:53705408-53705427 MS.gene58655:intron 15.0%
!!! TTTTTTACTCATAAATATCT+TGG + chr2.3:53704922-53704941 None:intergenic 15.0%
!! AAACTATAACCAAACATAAT+TGG + chr2.3:53705119-53705138 None:intergenic 20.0%
!! AAACTTAAACCAAAAATATG+TGG + chr2.3:53706124-53706143 None:intergenic 20.0%
!! AAAGTTTGAGTAAAAAACTT+TGG - chr2.3:53706751-53706770 MS.gene58655:intron 20.0%
!! AAGTTTGAGTAAAAAACTTT+GGG - chr2.3:53706752-53706771 MS.gene58655:intron 20.0%
!! AATGAAATTTGCAAATACAA+AGG - chr2.3:53707141-53707160 MS.gene58655:CDS 20.0%
!! AATGTGTTATAAAAAATGGA+CGG - chr2.3:53707515-53707534 MS.gene58655:CDS 20.0%
!! AATTTCTCAGAATAAGTAAA+TGG + chr2.3:53705227-53705246 None:intergenic 20.0%
!! AGAGTAAAAATTGAAACTTT+GGG + chr2.3:53704440-53704459 None:intergenic 20.0%
!! AGTAATAAACTAATAATGGT+TGG + chr2.3:53707470-53707489 None:intergenic 20.0%
!! ATAAAGCATGATAAATCATA+AGG + chr2.3:53705499-53705518 None:intergenic 20.0%
!! ATCTATTATTGCTATATATG+AGG - chr2.3:53706289-53706308 MS.gene58655:intron 20.0%
!! GTAATAAACTAATAATGGTT+GGG + chr2.3:53707469-53707488 None:intergenic 20.0%
!! TAAATACTTCAAATCAAAGA+AGG + chr2.3:53707228-53707247 None:intergenic 20.0%
!! TAATAAACTAATAATGGTTG+GGG + chr2.3:53707468-53707487 None:intergenic 20.0%
!! TACTTAACAATTCAAAAAGA+GGG + chr2.3:53704644-53704663 None:intergenic 20.0%
!! TAGATATAGAAAAGCTTAAA+TGG - chr2.3:53705525-53705544 MS.gene58655:intron 20.0%
!! TTATCTATTAAAGCTATATG+AGG - chr2.3:53705289-53705308 MS.gene58655:intron 20.0%
!! TTCAGTTCATAAGTTTAATT+TGG - chr2.3:53706042-53706061 MS.gene58655:intron 20.0%
!! TTGCAATTTCTATTTATGAA+AGG - chr2.3:53705170-53705189 MS.gene58655:intron 20.0%
!!! AATTTTTGGGTTAATCAAAT+GGG - chr2.3:53706891-53706910 MS.gene58655:CDS 20.0%
!!! TAATTTGGATATGAGTTTTT+GGG - chr2.3:53706057-53706076 MS.gene58655:intron 20.0%
!!! TAATTTGGTGATGAATTTTT+GGG - chr2.3:53706878-53706897 MS.gene58655:CDS 20.0%
!!! TAATTTGTTGATGAGTTTTT+GGG - chr2.3:53705052-53705071 MS.gene58655:CDS 20.0%
!!! TTAATTTGGATATGAGTTTT+TGG - chr2.3:53706056-53706075 MS.gene58655:intron 20.0%
!!! TTAATTTGGTGATGAATTTT+TGG - chr2.3:53706877-53706896 MS.gene58655:CDS 20.0%
!!! TTAATTTGTTGATGAGTTTT+TGG - chr2.3:53705051-53705070 MS.gene58655:CDS 20.0%
!!! TTGAAGTATTTATTCTTTCT+AGG - chr2.3:53707236-53707255 MS.gene58655:CDS 20.0%
!!! TTTGAATTTTTTCTATCCAA+AGG - chr2.3:53704549-53704568 MS.gene58655:intron 20.0%
!!! TTTTAAAAACTAACAAGCTA+AGG + chr2.3:53705401-53705420 None:intergenic 20.0%
! AAAGGATTTGATTAAGTCAT+TGG - chr2.3:53706662-53706681 MS.gene58655:intron 25.0%
! AATAAACTAATAATGGTTGG+GGG + chr2.3:53707467-53707486 None:intergenic 25.0%
! AATAAGTACTATACTATCCT+AGG + chr2.3:53706476-53706495 None:intergenic 25.0%
! AATGAAACTTGCAAATACAA+AGG - chr2.3:53706316-53706335 MS.gene58655:intron 25.0%
! AATGTATGAGTAAAACATGT+TGG - chr2.3:53705930-53705949 MS.gene58655:CDS 25.0%
! AATTGATACTAGCAAAAACA+AGG + chr2.3:53705748-53705767 None:intergenic 25.0%
! AATTGATATTAGCCACAATA+AGG + chr2.3:53704743-53704762 None:intergenic 25.0%
! ACTAAATGTCCAATTATGTT+TGG - chr2.3:53705107-53705126 MS.gene58655:CDS 25.0%
! AGATTAACAAGTTACACATT+TGG + chr2.3:53706363-53706382 None:intergenic 25.0%
! ATATCCTCAGAATAAGTAAA+TGG + chr2.3:53707052-53707071 None:intergenic 25.0%
! ATGTATGAGTAAAACATGTT+GGG - chr2.3:53705931-53705950 MS.gene58655:CDS 25.0%
! CAAGTATGTTTACAACATTA+AGG - chr2.3:53707081-53707100 MS.gene58655:CDS 25.0%
! CTACTTAACAATTCAAAAAG+AGG + chr2.3:53704645-53704664 None:intergenic 25.0%
! GAGAGTAAAAATTGAAACTT+TGG + chr2.3:53704441-53704460 None:intergenic 25.0%
! GGGATTAAAAAGATAATGTA+TGG + chr2.3:53705720-53705739 None:intergenic 25.0%
! GTTAAATGTACACTTATGTT+TGG - chr2.3:53706933-53706952 MS.gene58655:CDS 25.0%
! TAAACCATTTACTTATTCTG+AGG - chr2.3:53707045-53707064 MS.gene58655:CDS 25.0%
! TAAGTACTTCAAATCAAAGA+AGG + chr2.3:53706411-53706430 None:intergenic 25.0%
! TCCTTTGAACAAAATATAGA+TGG + chr2.3:53706648-53706667 None:intergenic 25.0%
! TGATTTGATTAAGTCATTAG+AGG - chr2.3:53704839-53704858 MS.gene58655:intron 25.0%
! TGGGAATGTGTTATAAAAAA+TGG - chr2.3:53707511-53707530 MS.gene58655:CDS 25.0%
! TTATCTCTTTAAGCTATATG+AGG - chr2.3:53707114-53707133 MS.gene58655:CDS 25.0%
! TTGGCTATAGTTTACATAAA+AGG - chr2.3:53706952-53706971 MS.gene58655:CDS 25.0%
! TTGGTTATAGTTTACCTAAA+AGG - chr2.3:53705126-53705145 MS.gene58655:CDS 25.0%
!! AAGCTAGTTTGTAAAATATC+AGG + chr2.3:53704606-53704625 None:intergenic 25.0%
!! AATTTGGTGGAATAAGTAAA+TGG + chr2.3:53706231-53706250 None:intergenic 25.0%
!! ACCATCTATATTTTGTTCAA+AGG - chr2.3:53706644-53706663 MS.gene58655:intron 25.0%
!! AGCTAGTTTGTAAAATATCA+GGG + chr2.3:53704605-53704624 None:intergenic 25.0%
!! CTCTTTTTGAATTGTTAAGT+AGG - chr2.3:53704643-53704662 MS.gene58655:intron 25.0%
!! TGTTTTACTCATACATTTCT+TGG + chr2.3:53705927-53705946 None:intergenic 25.0%
!! TTTCAATTTTTACTCTCCAA+AGG - chr2.3:53704444-53704463 MS.gene58655:intron 25.0%
!!! AAGTTGACGTTTTTAAGAAA+TGG - chr2.3:53704955-53704974 MS.gene58655:CDS 25.0%
!!! ACTTGTTAATCTTCTTCTTT+TGG - chr2.3:53706371-53706390 MS.gene58655:intron 25.0%
!!! AGTTGACGTTTTTAAGAAAT+GGG - chr2.3:53704956-53704975 MS.gene58655:CDS 25.0%
!!! ATCAATTTGATGACTGATTT+TGG - chr2.3:53704756-53704775 MS.gene58655:intron 25.0%
!!! CAAGTTTGTTTTCTTCTTTA+AGG - chr2.3:53705256-53705275 MS.gene58655:intron 25.0%
!!! GAATTTTTGGGTTAATCAAA+TGG - chr2.3:53706890-53706909 MS.gene58655:CDS 25.0%
!!! TTGAAGTACTTATTTTGTCT+AGG - chr2.3:53706419-53706438 MS.gene58655:intron 25.0%
AAAGAAGGAACAAGATAAGA+TGG + chr2.3:53707213-53707232 None:intergenic 30.0%
AAGATGTTATTCGAGCATTT+AGG - chr2.3:53704991-53705010 MS.gene58655:CDS 30.0%
AAGCTTAATTCCAAGAACTT+AGG + chr2.3:53704510-53704529 None:intergenic 30.0%
AAGTTGACGTCTATAAGAAA+TGG - chr2.3:53706781-53706800 MS.gene58655:intron 30.0%
AATCAATCAAACAACCACTT+TGG + chr2.3:53707400-53707419 None:intergenic 30.0%
AATTAAACTTGCATGCACAA+AGG - chr2.3:53705316-53705335 MS.gene58655:intron 30.0%
ACAATTTCTTTAGACCAAAG+TGG - chr2.3:53707383-53707402 MS.gene58655:CDS 30.0%
ACATAAAAGGATCATTCCAA+GGG - chr2.3:53706965-53706984 MS.gene58655:CDS 30.0%
AGCTTAATTCCAAGAACTTA+GGG + chr2.3:53704509-53704528 None:intergenic 30.0%
AGTTGACGTCTATAAGAAAT+GGG - chr2.3:53706782-53706801 MS.gene58655:intron 30.0%
ATTGAAGCCAACATCAAATA+AGG + chr2.3:53706849-53706868 None:intergenic 30.0%
ATTGAAGTCAACATCGAAAT+AGG + chr2.3:53705023-53705042 None:intergenic 30.0%
CAGAAAAAGCCATCTATATT+TGG - chr2.3:53704810-53704829 MS.gene58655:intron 30.0%
CTCAACTTCTTCAAAAATCA+CGG - chr2.3:53704336-53704355 MS.gene58655:intron 30.0%
CTTAATTCGACATTCGAAAT+GGG - chr2.3:53706524-53706543 MS.gene58655:intron 30.0%
GATTGATATTAGCCACAATA+AGG + chr2.3:53706569-53706588 None:intergenic 30.0%
GTATGTTTACAACATTAAGG+AGG - chr2.3:53707084-53707103 MS.gene58655:CDS 30.0%
GTGGTATAAACAAACTATGT+AGG - chr2.3:53705626-53705645 MS.gene58655:CDS 30.0%
GTTTGATCAAGAATACATAG+TGG - chr2.3:53705607-53705626 MS.gene58655:CDS 30.0%
TACATAAAAGGATCATTCCA+AGG - chr2.3:53706964-53706983 MS.gene58655:CDS 30.0%
TAGAGGAAGTTAAGTGTTTA+GGG - chr2.3:53704856-53704875 MS.gene58655:intron 30.0%
TATAAACAAACTATGTAGGC+AGG - chr2.3:53705630-53705649 MS.gene58655:CDS 30.0%
TATCTTCTGATGAAAGTTTG+AGG - chr2.3:53706181-53706200 MS.gene58655:intron 30.0%
TATTCTTGATCAAACACACA+TGG + chr2.3:53705602-53705621 None:intergenic 30.0%
TCAGATGAACCAAATATAGA+TGG + chr2.3:53704822-53704841 None:intergenic 30.0%
TCTTACCTCATCGATAAATT+CGG - chr2.3:53704240-53704259 MS.gene58655:intron 30.0%
TTAGAGGAAGTTAAGTGTTT+AGG - chr2.3:53704855-53704874 MS.gene58655:intron 30.0%
! AAACTTGCTCAAGAACAATT+TGG + chr2.3:53705243-53705262 None:intergenic 30.0%
! ATCAATCTGATGTCTGATTT+TGG - chr2.3:53706582-53706601 MS.gene58655:intron 30.0%
! ATTTTGCGCAGAAATAGAAT+TGG - chr2.3:53707417-53707436 MS.gene58655:CDS 30.0%
! GTTTAAAGGCCACATATTTT+TGG - chr2.3:53706112-53706131 MS.gene58655:intron 30.0%
! TTGCAGTTTCTTTTGATGAA+AGG - chr2.3:53706996-53707015 MS.gene58655:CDS 30.0%
! TTGGTTTAAGTTTGCAGAAA+AGG - chr2.3:53706131-53706150 MS.gene58655:intron 30.0%
!! ATCCTTCAATCACTACTTTT+GGG - chr2.3:53706709-53706728 MS.gene58655:intron 30.0%
!! GTTGACGTTTTTAAGAAATG+GGG - chr2.3:53704957-53704976 MS.gene58655:CDS 30.0%
!! GTTTGTTTTCTTCTTTAAGG+AGG - chr2.3:53705259-53705278 MS.gene58655:intron 30.0%
!! TTTCTGAAGCAATTTAGCAA+TGG + chr2.3:53704796-53704815 None:intergenic 30.0%
!!! AAGTTTTTTCCCAAGCATTT+AGG - chr2.3:53705996-53706015 MS.gene58655:intron 30.0%
!!! AGTTTTTGGGTCAATCAATT+GGG - chr2.3:53705065-53705084 MS.gene58655:CDS 30.0%
!!! AGTTTTTGGGTCAATCTATT+GGG - chr2.3:53706070-53706089 MS.gene58655:intron 30.0%
!!! GGTTTTGAAATAAAGCTGTT+TGG + chr2.3:53704295-53704314 None:intergenic 30.0%
AAGAAGTTGAGAACTGAATC+AGG + chr2.3:53704327-53704346 None:intergenic 35.0%
AAGTCATTGGAGGAAGTTAA+AGG - chr2.3:53706675-53706694 MS.gene58655:intron 35.0%
AATGACCTAATCAAACCAGT+TGG + chr2.3:53705842-53705861 None:intergenic 35.0%
AATGGACGGAACATATTTCT+TGG - chr2.3:53707529-53707548 MS.gene58655:CDS 35.0%
ACATCATCAAAAGAGAACCA+TGG - chr2.3:53704382-53704401 MS.gene58655:intron 35.0%
ACCTAAAAGGATCATTCCAA+GGG - chr2.3:53705139-53705158 MS.gene58655:CDS 35.0%
ACTAGCAAAAACAAGGTGAT+AGG + chr2.3:53705741-53705760 None:intergenic 35.0%
AGAATCCGAATTTATCGATG+AGG + chr2.3:53704248-53704267 None:intergenic 35.0%
ATGGAAAGAGAACTAAGACA+AGG + chr2.3:53705583-53705602 None:intergenic 35.0%
ATGGACGGAACATATTTCTT+GGG - chr2.3:53707530-53707549 MS.gene58655:CDS 35.0%
ATTAGCCACAATAAGGTGAT+GGG + chr2.3:53706562-53706581 None:intergenic 35.0%
CAAGTTACACATTTGGTAGA+AGG + chr2.3:53706356-53706375 None:intergenic 35.0%
CTAGAAAGGCCATCTATATT+TGG - chr2.3:53705815-53705834 MS.gene58655:CDS 35.0%
CTAGCAAAAACAAGGTGATA+GGG + chr2.3:53705740-53705759 None:intergenic 35.0%
CTTGAGCAAGTTTGTCTTTA+AGG - chr2.3:53706254-53706273 MS.gene58655:intron 35.0%
GAAATCACATACTAAGCGAA+TGG + chr2.3:53705356-53705375 None:intergenic 35.0%
GATAATGTATGGAGAACCAA+AGG + chr2.3:53705709-53705728 None:intergenic 35.0%
GATGTTGAGAATATCTGAGT+CGG + chr2.3:53704367-53704386 None:intergenic 35.0%
GCAAATACAAAGGAGAACAA+TGG - chr2.3:53706326-53706345 MS.gene58655:intron 35.0%
GCTTAATTCGACATTCGAAA+TGG - chr2.3:53706523-53706542 MS.gene58655:intron 35.0%
GGATTTGATTAAGTCATTGG+AGG - chr2.3:53706665-53706684 MS.gene58655:intron 35.0%
GGTATTATTATCACCAACTC+TGG + chr2.3:53705478-53705497 None:intergenic 35.0%
GTATTTATTCTTTCTAGGCC+AGG - chr2.3:53707241-53707260 MS.gene58655:CDS 35.0%
GTTGACGTCTATAAGAAATG+GGG - chr2.3:53706783-53706802 MS.gene58655:intron 35.0%
TACCTAAAAGGATCATTCCA+AGG - chr2.3:53705138-53705157 MS.gene58655:CDS 35.0%
TAGTTGCAATTTCGATGCAT+AGG - chr2.3:53707337-53707356 MS.gene58655:CDS 35.0%
TATTAGCCACAATAAGGTGA+TGG + chr2.3:53706563-53706582 None:intergenic 35.0%
TGAAACAATATCAGCACCTT+TGG + chr2.3:53704568-53704587 None:intergenic 35.0%
TGGACATTTAGTAAGTTCCA+AGG + chr2.3:53705099-53705118 None:intergenic 35.0%
TGGAGGAAGTTAAAGGTTTA+GGG - chr2.3:53706682-53706701 MS.gene58655:intron 35.0%
TGTACATTTAACAAGTGCCA+AGG + chr2.3:53706925-53706944 None:intergenic 35.0%
TTGGAGGAAGTTAAAGGTTT+AGG - chr2.3:53706681-53706700 MS.gene58655:intron 35.0%
! AACTGAATCAGGTTTTTGTG+AGG + chr2.3:53704316-53704335 None:intergenic 35.0%
! ACACATTCCCAAAAGTATGA+TGG + chr2.3:53707502-53707521 None:intergenic 35.0%
! ATCTCACACCATCATACTTT+TGG - chr2.3:53707491-53707510 MS.gene58655:CDS 35.0%
! GATCCTTCAATCACTACTTT+TGG - chr2.3:53706708-53706727 MS.gene58655:intron 35.0%
! GCTAGTATCAATTTGATGAC+TGG - chr2.3:53705755-53705774 MS.gene58655:intron 35.0%
! TAAATGGTCTTGCATTGATC+TGG - chr2.3:53705541-53705560 MS.gene58655:CDS 35.0%
! TCTCACACCATCATACTTTT+GGG - chr2.3:53707492-53707511 MS.gene58655:CDS 35.0%
! TTCTAGAAGCAATCTAGCAA+TGG + chr2.3:53705801-53705820 None:intergenic 35.0%
! TTGCTAGATTGCTTCTAGAA+AGG - chr2.3:53705801-53705820 MS.gene58655:intron 35.0%
! TTGGGTTAATCAAATGGGTT+GGG - chr2.3:53706896-53706915 MS.gene58655:CDS 35.0%
! TTTGGGTTAATCAAATGGGT+TGG - chr2.3:53706895-53706914 MS.gene58655:CDS 35.0%
!! AACTGGTTTGATTAGGTCAT+TGG - chr2.3:53705841-53705860 MS.gene58655:CDS 35.0%
!! ACGTTTTTAAGAAATGGGGT+TGG - chr2.3:53704961-53704980 MS.gene58655:CDS 35.0%
!! ACTTTGGGAGAATTCTTTTG+TGG + chr2.3:53704425-53704444 None:intergenic 35.0%
!! ATCCTTCAACGACTACTTTT+AGG - chr2.3:53704883-53704902 MS.gene58655:CDS 35.0%
!! CTTTGGGAGAATTCTTTTGT+GGG + chr2.3:53704424-53704443 None:intergenic 35.0%
!! GTTTCAGCCTTATTTGATGT+TGG - chr2.3:53706839-53706858 MS.gene58655:CDS 35.0%
!! TAGGTTTTTGAAAACCGACA+AGG - chr2.3:53704662-53704681 MS.gene58655:intron 35.0%
!! TCCTTCAACGACTACTTTTA+GGG - chr2.3:53704884-53704903 MS.gene58655:CDS 35.0%
!! TTTTGTCTAGGACAGTATAG+TGG - chr2.3:53706431-53706450 MS.gene58655:intron 35.0%
!!! GAGTTTTTGGGTCAATCAAT+TGG - chr2.3:53705064-53705083 MS.gene58655:CDS 35.0%
!!! GAGTTTTTGGGTCAATCTAT+TGG - chr2.3:53706069-53706088 MS.gene58655:intron 35.0%
AATTGCAAAACTGATGCCCT+TGG + chr2.3:53705158-53705177 None:intergenic 40.0%
ACCCTAAAAGTAGTCGTTGA+AGG + chr2.3:53704888-53704907 None:intergenic 40.0%
ACGTCTATAAGAAATGGGGT+TGG - chr2.3:53706787-53706806 MS.gene58655:CDS 40.0%
ACTCCTTGGCACTTGTTTAA+AGG - chr2.3:53706098-53706117 MS.gene58655:intron 40.0%
AGAAGATCTTACCCATTTGG+TGG + chr2.3:53707185-53707204 None:intergenic 40.0%
AGACTGCAACCTAAATGCTT+GGG + chr2.3:53706008-53706027 None:intergenic 40.0%
AGGTCATTGGAGGAAGTTAA+GGG - chr2.3:53705854-53705873 MS.gene58655:CDS 40.0%
ATGGTTGGGGGATGAATTAA+TGG + chr2.3:53707455-53707474 None:intergenic 40.0%
ATTCTTTCTAGGCCAGGATA+AGG - chr2.3:53707247-53707266 MS.gene58655:CDS 40.0%
ATTGGAGGAAGTTAAGGGTT+TGG - chr2.3:53705859-53705878 MS.gene58655:CDS 40.0%
CAAAAGAAACTGCAAAACCG+AGG + chr2.3:53706991-53707010 None:intergenic 40.0%
CCAGTTGGACCAAATATAGA+TGG + chr2.3:53705827-53705846 None:intergenic 40.0%
CCATCTATATTTGGTCCAAC+TGG - chr2.3:53705824-53705843 MS.gene58655:CDS 40.0%
CTTGCTCAAGAACAATTTGG+TGG + chr2.3:53706244-53706263 None:intergenic 40.0%
GACAGAAGATCTTACCCATT+TGG + chr2.3:53707188-53707207 None:intergenic 40.0%
GCAGAAAAGGATCATTCCAA+GGG - chr2.3:53706144-53706163 MS.gene58655:intron 40.0%
GCAGAGAATGATATCCTTGT+CGG + chr2.3:53704679-53704698 None:intergenic 40.0%
GCATGCACAAAGGAAAACAA+TGG - chr2.3:53705326-53705345 MS.gene58655:intron 40.0%
GCATTACCAACATCAGACAA+AGG + chr2.3:53707579-53707598 None:intergenic 40.0%
GTCCCAAAAGTAGTGATTGA+AGG + chr2.3:53706714-53706733 None:intergenic 40.0%
TAGACTGCAACCTAAATGCT+TGG + chr2.3:53706009-53706028 None:intergenic 40.0%
TAGGACAGTATAGTGGTTAC+TGG - chr2.3:53706438-53706457 MS.gene58655:intron 40.0%
TAGGTCATTGGAGGAAGTTA+AGG - chr2.3:53705853-53705872 MS.gene58655:CDS 40.0%
TAGTGGTAACCCTAAGTTCT+TGG - chr2.3:53704497-53704516 MS.gene58655:intron 40.0%
TGCAGAAAAGGATCATTCCA+AGG - chr2.3:53706143-53706162 MS.gene58655:intron 40.0%
TGGTTTGATTAGGTCATTGG+AGG - chr2.3:53705844-53705863 MS.gene58655:CDS 40.0%
TTAGCCACAATAAGGTGATG+GGG + chr2.3:53706561-53706580 None:intergenic 40.0%
TTCTTTCTAGGCCAGGATAA+GGG - chr2.3:53707248-53707267 MS.gene58655:CDS 40.0%
TTGGAGGAAGTTAAGGGTTT+GGG - chr2.3:53705860-53705879 MS.gene58655:CDS 40.0%
TTTACCTCAACTGCAGACAA+AGG + chr2.3:53707601-53707620 None:intergenic 40.0%
TTTGGGTCAATCAATTGGGT+CGG - chr2.3:53705069-53705088 MS.gene58655:CDS 40.0%
! ATGTCTTTGAGAAACGAGGT+TGG - chr2.3:53705966-53705985 MS.gene58655:CDS 40.0%
! ATTTCTTGGGAGGCTATTTC+TGG - chr2.3:53707543-53707562 MS.gene58655:CDS 40.0%
! GAGCAAGTTTGTCTTTAAGG+AGG - chr2.3:53706257-53706276 MS.gene58655:intron 40.0%
! GTCTTGCATTGATCTGGTAA+GGG - chr2.3:53705547-53705566 MS.gene58655:CDS 40.0%
! GTTGCAGTCTAGTTTGATGT+TGG - chr2.3:53706018-53706037 MS.gene58655:intron 40.0%
! TCTATTGGGTTAGAACTCCT+TGG - chr2.3:53706084-53706103 MS.gene58655:intron 40.0%
! TTTCTCTGTCGCAATGCTTT+TGG - chr2.3:53704150-53704169 MS.gene58655:CDS 40.0%
!! AATTCTTTTGTGGGTATCGC+AGG + chr2.3:53704415-53704434 None:intergenic 40.0%
!! TTGGTCCAACTGGTTTGATT+AGG - chr2.3:53705834-53705853 MS.gene58655:CDS 40.0%
!!! GACTACTTTTAGGGTTGCTT+TGG - chr2.3:53704893-53704912 MS.gene58655:CDS 40.0%
!!! GTCCTTCATTGGCTACTTTT+GGG - chr2.3:53705888-53705907 MS.gene58655:CDS 40.0%
!!! TCCTTCATTGGCTACTTTTG+GGG - chr2.3:53705889-53705908 MS.gene58655:CDS 40.0%
!!! TTTCCTAGCTGCTTTTCCTT+TGG - chr2.3:53705690-53705709 MS.gene58655:intron 40.0%
AATGCCTTTGTCTGCAGTTG+AGG - chr2.3:53707594-53707613 MS.gene58655:CDS 45.0%
ACAATACCAACCCCTTATCC+TGG + chr2.3:53707262-53707281 None:intergenic 45.0%
AGCATGCCTTTGTCTGATGT+TGG - chr2.3:53707570-53707589 MS.gene58655:CDS 45.0%
ATGAGGTAAGACACAGCGAA+AGG + chr2.3:53704231-53704250 None:intergenic 45.0%
ATGGCATGTCATCCACCAAA+TGG - chr2.3:53707170-53707189 MS.gene58655:CDS 45.0%
GAACCAAAGGAAAAGCAGCT+AGG + chr2.3:53705696-53705715 None:intergenic 45.0%
GACGGAACATATTTCTTGGG+AGG - chr2.3:53707533-53707552 MS.gene58655:CDS 45.0%
GGTGCAAGTTGTGTCGTATT+GGG + chr2.3:53707629-53707648 None:intergenic 45.0%
GTATCCCCATCACCTTATTG+TGG - chr2.3:53706554-53706573 MS.gene58655:intron 45.0%
GTGAAGTGGTAGTAGTGGTA+AGG + chr2.3:53704206-53704225 None:intergenic 45.0%
TAGCCACAATAAGGCGATGT+GGG + chr2.3:53704734-53704753 None:intergenic 45.0%
TAGGGTTACCACTAACCATG+CGG + chr2.3:53704491-53704510 None:intergenic 45.0%
TATTGCACAACCAATGCCCT+TGG + chr2.3:53706163-53706182 None:intergenic 45.0%
TCAATTGGGTCGGAATTCCT+TGG - chr2.3:53705079-53705098 MS.gene58655:CDS 45.0%
TCTTTCTAGGCCAGGATAAG+GGG - chr2.3:53707249-53707268 MS.gene58655:CDS 45.0%
TGAGGTAAGACACAGCGAAA+GGG + chr2.3:53704230-53704249 None:intergenic 45.0%
TGGAGGAAGTTAAGGGTTTG+GGG - chr2.3:53705861-53705880 MS.gene58655:CDS 45.0%
TGGCATGTCATCCACCAAAT+GGG - chr2.3:53707171-53707190 MS.gene58655:CDS 45.0%
TGGCCTTTAAACAAGTGCCA+AGG + chr2.3:53706104-53706123 None:intergenic 45.0%
TTAGCCACAATAAGGCGATG+TGG + chr2.3:53704735-53704754 None:intergenic 45.0%
! AAGGATCATTCCAAGGGCAT+TGG - chr2.3:53705145-53705164 MS.gene58655:CDS 45.0%
! GAAGTTAAGGGTTTGGGGTT+TGG - chr2.3:53705866-53705885 MS.gene58655:CDS 45.0%
! GCCCTTGGAATGATCCTTTT+AGG + chr2.3:53705143-53705162 None:intergenic 45.0%
! GGTCTTGCATTGATCTGGTA+AGG - chr2.3:53705546-53705565 MS.gene58655:CDS 45.0%
! GTCGATGTCTTTGAGAAACG+AGG - chr2.3:53705962-53705981 MS.gene58655:CDS 45.0%
! TTTGGGGTTTGGTCCTTCAT+TGG - chr2.3:53705877-53705896 MS.gene58655:CDS 45.0%
!! GGATAAGGGGTTGGTATTGT+TGG - chr2.3:53707262-53707281 MS.gene58655:CDS 45.0%
!! GGTCCTTCATTGGCTACTTT+TGG - chr2.3:53705887-53705906 MS.gene58655:CDS 45.0%
!! TCAAATGGGTTGGGATTCCT+TGG - chr2.3:53706905-53706924 MS.gene58655:CDS 45.0%
AACCATGCGGACAATGTCAG+AGG + chr2.3:53704478-53704497 None:intergenic 50.0%
AAGGATCATTCCAAGGGCCT+CGG - chr2.3:53706971-53706990 MS.gene58655:CDS 50.0%
ACTGGTTAGTGCAGTTGCCT+AGG - chr2.3:53706456-53706475 MS.gene58655:intron 50.0%
AGGGTGTGAAGTGGTAGTAG+TGG + chr2.3:53704211-53704230 None:intergenic 50.0%
CAACTCTGGCACTCTGATCT+GGG + chr2.3:53705464-53705483 None:intergenic 50.0%
CGGTGCAAGTTGTGTCGTAT+TGG + chr2.3:53707630-53707649 None:intergenic 50.0%
GACATTGTCCGCATGGTTAG+TGG - chr2.3:53704480-53704499 MS.gene58655:intron 50.0%
GCCCCAAAAGTAGCCAATGA+AGG + chr2.3:53705893-53705912 None:intergenic 50.0%
GTATCGCAGGAAAGAAGCCA+TGG + chr2.3:53704402-53704421 None:intergenic 50.0%
TACCTCTGACATTGTCCGCA+TGG - chr2.3:53704473-53704492 MS.gene58655:intron 50.0%
! TAGCCCACATCGCCTTATTG+TGG - chr2.3:53704728-53704747 MS.gene58655:intron 50.0%
!! GTCAGAGGTAGAAGCACCTT+TGG + chr2.3:53704463-53704482 None:intergenic 50.0%
AACTGCAAAACCGAGGCCCT+TGG + chr2.3:53706984-53707003 None:intergenic 55.0%
CCAACTCTGGCACTCTGATC+TGG + chr2.3:53705465-53705484 None:intergenic 55.0%
TCTAGGCCAGGATAAGGGGT+TGG - chr2.3:53707253-53707272 MS.gene58655:CDS 55.0%
! CACAGCGAAAGGGTGTGAAG+TGG + chr2.3:53704220-53704239 None:intergenic 55.0%
! CCAGATCAGAGTGCCAGAGT+TGG - chr2.3:53705462-53705481 MS.gene58655:intron 55.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 53704138 53707660 53704138 ID=MS.gene58655
chr2.3 mRNA 53704138 53707660 53704138 ID=MS.gene58655.t1;Parent=MS.gene58655
chr2.3 exon 53706786 53707660 53706786 ID=MS.gene58655.t1.exon1;Parent=MS.gene58655.t1
chr2.3 CDS 53706786 53707660 53706786 ID=cds.MS.gene58655.t1;Parent=MS.gene58655.t1
chr2.3 exon 53705815 53705990 53705815 ID=MS.gene58655.t1.exon2;Parent=MS.gene58655.t1
chr2.3 CDS 53705815 53705990 53705815 ID=cds.MS.gene58655.t1;Parent=MS.gene58655.t1
chr2.3 exon 53705536 53705650 53705536 ID=MS.gene58655.t1.exon3;Parent=MS.gene58655.t1
chr2.3 CDS 53705536 53705650 53705536 ID=cds.MS.gene58655.t1;Parent=MS.gene58655.t1
chr2.3 exon 53704859 53705169 53704859 ID=MS.gene58655.t1.exon4;Parent=MS.gene58655.t1
chr2.3 CDS 53704859 53705169 53704859 ID=cds.MS.gene58655.t1;Parent=MS.gene58655.t1
chr2.3 exon 53704138 53704187 53704138 ID=MS.gene58655.t1.exon5;Parent=MS.gene58655.t1
chr2.3 CDS 53704138 53704187 53704138 ID=cds.MS.gene58655.t1;Parent=MS.gene58655.t1
Gene Sequence

>MS.gene58655

ATGCTCAAAGCATTTCTCTGTCGCAATGCTTTTGGCATATCAAATTACTCAACAACACTCAGATTCCTTACCACTACTACCACTTCACACCCTTTCGCTGTGTCTTACCTCATCGATAAATTCGGATTCTCACATGAATTTGCACTCAAAGCTTCCAAACAGCTTTATTTCAAAACCTCACAAAAACCTGATTCAGTTCTCAACTTCTTCAAAAATCACGGTTTCACCGACTCAGATATTCTCAACATCATCAAAAGAGAACCATGGCTTCTTTCCTGCGATACCCACAAAAGAATTCTCCCAAAGTTTCAATTTTTACTCTCCAAAGGTGCTTCTACCTCTGACATTGTCCGCATGGTTAGTGGTAACCCTAAGTTCTTGGAATTAAGCTTGAAGAATCATCAAATTAAGTTTGAATTTTTTCTATCCAAAGGTGCTGATATTGTTTCATTGTTAACTGCATACCCTGATATTTTACAAACTAGCTTTGAGAAACGAATAATCCCTCTTTTTGAATTGTTAAGTAGGTTTTTGAAAACCGACAAGGATATCATTCTCTGCTTAATTCGACATTCAAAGTCGTTTATTATTAGCCCACATCGCCTTATTGTGGCTAATATCAATTTGATGACTGATTTTGGAGTTTGTGATTCTACCATTGCTAAATTGCTTCAGAAAAAGCCATCTATATTTGGTTCATCTGATTTGATTAAGTCATTAGAGGAAGTTAAGTGTTTAGGGTTTGATCCTTCAACGACTACTTTTAGGGTTGCTTTGGCAGCCAAGATATTTATGAGTAAAAAATTTTGGGATGAGAAAGTTGACGTTTTTAAGAAATGGGGTTGGTCTGATGAAGATGTTATTCGAGCATTTAGGTGTCAGCCTATTTCGATGTTGACTTCAATTGAAAAGATTAATTTGTTGATGAGTTTTTGGGTCAATCAATTGGGTCGGAATTCCTTGGAACTTACTAAATGTCCAATTATGTTTGGTTATAGTTTACCTAAAAGGATCATTCCAAGGGCATCAGTTTTGCAATTTCTATTTATGAAAGGTTTGCGAGAAAAGAATGCAAGCTCAGTTACACCATTTACTTATTCTGAGAAATTGTTCTTGAGCAAGTTTGTTTTCTTCTTTAAGGAGGAGTCTGATTATCTATTAAAGCTATATGAGGAAAAAATTAAACTTGCATGCACAAAGGAAAACAATGGCATGCCATTCGCTTAGTATGTGATTTCGTATTCTTCGTTTGTAATCTAACCTTAGCTTGTTAGTTTTTAAAATTGATAGAGGATGATCTAGCTGACTTGTTTTATTTTCTAACCCAGATCAGAGTGCCAGAGTTGGTGATAATAATACCTTATGATTTATCATGCTTTATAACTAGTAGATATAGAAAAGCTTAAATGGTCTTGCATTGATCTGGTAAGGGAATGTTTTCTCCTTGTCTTAGTTCTCTTTCCATGTGTGTTTGATCAAGAATACATAGTGGTATAAACAAACTATGTAGGCAGGTCTGATTTAAACTTTAAGCTTGAGATTATTAAGTACTTTTCCTAGCTGCTTTTCCTTTGGTTCTCCATACATTATCTTTTTAATCCCTATCACCTTGTTTTTGCTAGTATCAATTTGATGACTGGTTTTTGAGTTTGCGATTCTACCATTGCTAGATTGCTTCTAGAAAGGCCATCTATATTTGGTCCAACTGGTTTGATTAGGTCATTGGAGGAAGTTAAGGGTTTGGGGTTTGGTCCTTCATTGGCTACTTTTGGGGCTTCTTTGATAGCCAAGAAATGTATGAGTAAAACATGTTGGGATGAGAAAGTCGATGTCTTTGAGAAACGAGGTTGGTCTGATGAAGTTTTTTCCCAAGCATTTAGGTTGCAGTCTAGTTTGATGTTGGCTTCAGTTCATAAGTTTAATTTGGATATGAGTTTTTGGGTCAATCTATTGGGTTAGAACTCCTTGGCACTTGTTTAAAGGCCACATATTTTTGGTTTAAGTTTGCAGAAAAGGATCATTCCAAGGGCATTGGTTGTGCAATATCTTCTGATGAAAGTTTGAGGAAAAAGATTTCAAGATTAGCTAAACCATTTACTTATTCCACCAAATTGTTCTTGAGCAAGTTTGTCTTTAAGGAGGAGTCTGATTATCTATTATTGCTATATATGAGGAAAAAATGAAACTTGCAAATACAAAGGAGAACAATGGCATGCCTTCTACCAAATGTGTAACTTGTTAATCTTCTTCTTTTGGAATTTGAGCTTGTTCCTTCTTTGATTTGAAGTACTTATTTTGTCTAGGACAGTATAGTGGTTACTGGTTAGTGCAGTTGCCTAGGATAGTATAGTACTTATTTTAAAACTAACAAGGATACAATTGTTTGCTTAATTCGACATTCGAAATGGGTTGCTATGTATCCCCATCACCTTATTGTGGCTAATATCAATCTGATGTCTGATTTTGGAGTTTCTGATTTTGTCATTTCTAGATTGCTTCAAAATAAACCATCTATATTTTGTTCAAAGGATTTGATTAAGTCATTGGAGGAAGTTAAAGGTTTAGGGTTTGATCCTTCAATCACTACTTTTGGGACTGCTTTGATAGCTGAGAAAAGTTTGAGTAAAAAACTTTGGGATGAGAAAGTTGACGTCTATAAGAAATGGGGTTGGTCTGATAAAGATGTTATTCGAATATTTAAGTTTCAGCCTTATTTGATGTTGGCTTCAATTGATAAGATTAATTTGGTGATGAATTTTTGGGTTAATCAAATGGGTTGGGATTCCTTGGCACTTGTTAAATGTACACTTATGTTTGGCTATAGTTTACATAAAAGGATCATTCCAAGGGCCTCGGTTTTGCAGTTTCTTTTGATGAAAGGTTGCGAAAAAAGAATGCAAGCTTAGTTAAACCATTTACTTATTCTGAGGATATGTTCTTGAGCAAGTATGTTTACAACATTAAGGAGGAGTCTGATTATCTCTTTAAGCTATATGAGGAAAAAATGAAATTTGCAAATACAAAGGAGAACAATGGCATGTCATCCACCAAATGGGTAAGATCTTCTGTCATCCATCTTATCTTGTTCCTTCTTTGATTTGAAGTATTTATTCTTTCTAGGCCAGGATAAGGGGTTGGTATTGTTGGCTTGTTTCATTTACTAATTTGAACTACTGTTATTTTTCGTTATCATCAATTTTAGTTGCAATTTCGATGCATAGGTCTGCGTTTAGTATATTGTAGTTACAATTTCTTTAGACCAAAGTGGTTGTTTGATTGATTTTGCGCAGAAATAGAATTGGTATCATCTTCTTCCATTAATTCATCCCCCAACCATTATTAGTTTATTACTAATCTCACACCATCATACTTTTGGGAATGTGTTATAAAAAATGGACGGAACATATTTCTTGGGAGGCTATTTCTGGTTTTAGCATGCCTTTGTCTGATGTTGGTAATGCCTTTGTCTGCAGTTGAGGTAAATTCGACCCAATACGACACAACTTGCACCGAAGAACTTTGA
Protein sequence

>MS.gene58655.t1

MLKAFLCRNAFGISNYSTTLRFLTTTTTSHPFAVSYLIDKFGFSHEFALKASKQLYFKTSQKPDSVLNFFKNHGFTDSDILNIIKREPWLLSCDTHKRILPKFQFLLSKGASTSDIVRMVSGNPKFLELSLKNHQIKFEFFLSKGADIVSLLTAYPDILQTSFEKRIIPLFELLSRFLKTDKDIILCLIRHSKSFIISPHRLIVANINLMTDFGVCDSTIAKLLQKKPSIFGSSDLIKSLEEVKCLGFDPSTTTFRVALAAKIFMSKKFWDEKVDVFKKWGWSDEDVIRAFRLLLERPSIFGPTGLIRSLEEVKGLGFGPSLATFGASLIAKKCMSKTCWDEKVDVFEKREKDHSKGIGCAISSDESLRKKISRLAKPFTYSTKLFLSKLLQNKPSIFCSKDLIKSLEEVKGLGFDPSITTFGTALIAEKSLSKKLWDEKVDVYKKWGWSDKDVIRIFKFQPYLMLASIDKINLVMNFWVNQMGWDSLALVKFEVNSTQYDTTCTEEL