AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene52434

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene52434.t1 MTR_2g437240 73.317 416 82 3 211 603 1 410 0.0 596
MS.gene52434.t1 MTR_2g437200 70.050 404 92 3 211 591 1 398 0.0 555
MS.gene52434.t1 MTR_2g437150 68.170 377 104 3 235 607 42 406 0.0 518
MS.gene52434.t1 MTR_2g438020 69.713 383 92 2 247 606 70 451 1.44e-180 520
MS.gene52434.t1 MTR_2g437170 67.717 381 106 4 229 604 35 403 8.01e-179 512
MS.gene52434.t1 MTR_2g437120 66.846 371 108 3 237 605 40 397 8.09e-170 489
MS.gene52434.t1 MTR_2g437160 64.800 375 117 3 235 607 50 411 9.68e-170 489
MS.gene52434.t1 MTR_2g437100 69.041 365 93 4 235 591 43 395 2.38e-167 483
MS.gene52434.t1 MTR_2g437960 66.574 359 106 2 248 604 53 399 6.22e-166 479
MS.gene52434.t1 MTR_2g437960 66.574 359 106 2 248 604 53 399 2.24e-165 479
MS.gene52434.t1 MTR_2g438010 62.025 395 127 3 223 606 36 418 1.64e-163 474
MS.gene52434.t1 MTR_2g437180 59.624 426 136 7 187 607 2 396 7.63e-163 471
MS.gene52434.t1 MTR_2g076320 62.879 396 124 3 222 606 15 398 5.61e-162 469
MS.gene52434.t1 MTR_2g437990 62.121 396 126 4 222 606 15 397 4.70e-160 465
MS.gene52434.t1 MTR_2g437130 59.947 377 130 3 230 606 31 386 1.24e-150 439
MS.gene52434.t1 MTR_2g437260 56.331 387 150 5 211 595 1 370 2.89e-145 426
MS.gene52434.t1 MTR_2g437940 55.765 425 126 7 187 606 2 369 1.08e-141 416
MS.gene52434.t1 MTR_2g437080 52.660 376 157 4 228 601 24 380 3.51e-130 387
MS.gene52434.t1 MTR_2g436440 52.116 378 160 4 228 603 30 388 8.89e-129 384
MS.gene52434.t1 MTR_2g437060 52.830 371 158 3 231 599 38 393 4.69e-127 379
MS.gene52434.t1 MTR_2g437020 53.476 374 150 6 230 599 25 378 2.06e-125 375
MS.gene52434.t1 MTR_2g437040 50.000 376 167 4 230 603 26 382 1.18e-120 362
MS.gene52434.t1 MTR_2g437030 46.585 410 198 4 196 603 78 468 6.34e-117 356
MS.gene52434.t1 MTR_4g119550 49.441 358 165 3 243 599 46 388 9.71e-114 345
MS.gene52434.t1 MTR_2g436400 49.292 353 162 3 245 595 44 381 1.49e-109 334
MS.gene52434.t1 MTR_2g436460 48.011 352 167 5 242 592 41 377 2.10e-99 308
MS.gene52434.t1 MTR_4g119580 45.480 354 177 3 236 589 33 370 1.74e-95 298
MS.gene52434.t1 MTR_4g120380 45.821 347 173 2 243 589 39 370 2.77e-95 297
MS.gene52434.t1 MTR_2g437160 73.936 188 49 0 420 607 133 320 6.54e-94 291
MS.gene52434.t1 MTR_2g437160 52.688 93 42 1 235 325 50 142 3.55e-22 98.2
MS.gene52434.t1 MTR_4g120380 46.483 327 160 2 243 569 39 350 2.70e-89 283
MS.gene52434.t1 MTR_2g019810 43.455 382 182 8 217 591 5 359 1.34e-82 264
MS.gene52434.t1 MTR_2g019840 41.867 375 199 6 226 598 21 378 2.05e-82 264
MS.gene52434.t1 MTR_2g437090 55.556 171 76 0 434 604 1 171 4.31e-63 206
MS.gene52434.t1 MTR_3g450500 28.989 376 241 5 225 589 10 370 2.12e-49 176
MS.gene52434.t1 MTR_4g119570 38.956 249 116 2 341 589 17 229 5.82e-48 167
MS.gene52434.t1 MTR_4g007490 30.435 345 224 3 248 589 37 368 1.32e-47 171
MS.gene52434.t1 MTR_3g085240 43.830 235 76 7 210 430 20 212 9.12e-42 152
MS.gene52434.t1 MTR_3g085240 58.696 92 21 1 491 582 174 248 2.00e-24 103
MS.gene52434.t1 MTR_2g436370 42.353 170 83 3 219 386 18 174 4.74e-34 129
MS.gene52434.t1 MTR_8g080990 29.773 309 201 4 279 585 74 368 1.09e-31 127
MS.gene52434.t1 MTR_8g081000 26.984 315 214 3 277 589 85 385 1.81e-30 124
MS.gene52434.t1 MTR_8g081000 26.984 315 214 3 277 589 85 385 2.15e-30 124
MS.gene52434.t1 MTR_8g081000 26.984 315 214 3 277 589 85 385 2.55e-30 124
MS.gene52434.t1 MTR_4g049400 37.931 174 81 5 187 358 2 150 3.15e-24 102
MS.gene52434.t1 MTR_5g007780 48.611 72 37 0 82 153 27 98 1.29e-15 73.2
MS.gene52434.t1 MTR_2g436380 42.424 99 54 2 434 532 1 96 1.70e-15 77.8
MS.gene52434.t1 MTR_1g046400 42.857 84 47 1 35 118 39 121 7.11e-14 68.9
MS.gene52434.t1 MTR_8g012210 21.739 322 230 8 292 605 63 370 3.23e-12 68.9
MS.gene52434.t1 MTR_5g014470 38.571 70 43 0 60 129 22 91 3.21e-11 60.5
MS.gene52434.t1 MTR_4g119615 53.704 54 24 1 528 581 22 74 3.70e-11 60.5
MS.gene52434.t1 MTR_8g055950 31.061 132 70 3 23 153 90 201 4.45e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene52434.t1 AT5G07900 32.361 377 237 4 218 588 35 399 4.29e-57 197
MS.gene52434.t1 AT1G21150 32.597 362 219 4 230 588 11 350 1.30e-50 179
MS.gene52434.t1 AT1G21150 32.849 344 216 3 248 588 55 386 3.47e-50 179
MS.gene52434.t1 AT1G21150 32.849 344 216 3 248 588 119 450 1.39e-49 179
MS.gene52434.t1 AT1G61980 28.962 366 204 6 248 574 51 399 1.98e-37 144
MS.gene52434.t1 AT1G61980 28.962 366 204 6 248 574 51 399 1.98e-37 144
MS.gene52434.t1 AT1G61980 28.962 366 204 6 248 574 51 399 1.98e-37 144
MS.gene52434.t1 AT1G61970 28.726 369 205 9 248 576 51 401 6.05e-36 140
MS.gene52434.t1 AT1G61970 28.726 369 205 9 248 576 51 401 6.05e-36 140
MS.gene52434.t1 AT1G61970 28.726 369 205 9 248 576 51 401 6.05e-36 140
MS.gene52434.t1 AT1G61970 28.726 369 205 9 248 576 51 401 6.05e-36 140
MS.gene52434.t1 AT1G61970 28.726 369 205 9 248 576 51 401 6.05e-36 140
MS.gene52434.t1 AT1G61970 28.726 369 205 9 248 576 51 401 6.05e-36 140
MS.gene52434.t1 AT1G61970 28.726 369 205 9 248 576 51 401 6.05e-36 140
MS.gene52434.t1 AT1G61990 28.030 396 222 7 233 588 36 408 6.73e-36 140
MS.gene52434.t1 AT1G61990 28.030 396 222 7 233 588 36 408 6.73e-36 140
MS.gene52434.t1 AT1G62120 26.866 402 228 7 194 551 2 381 9.67e-33 131
MS.gene52434.t1 AT3G46950 29.825 285 178 5 222 503 23 288 3.23e-31 127
MS.gene52434.t1 AT5G64950 26.613 372 240 9 233 589 23 376 1.28e-27 115
MS.gene52434.t1 AT1G61960 30.961 281 174 6 228 503 28 293 1.71e-26 113
MS.gene52434.t1 AT1G62085 27.807 374 232 11 249 607 55 405 6.48e-25 108
MS.gene52434.t1 AT1G62085 27.807 374 232 11 249 607 55 405 6.48e-25 108
MS.gene52434.t1 AT1G62010 27.362 307 168 6 282 551 71 359 3.70e-24 105
MS.gene52434.t1 AT1G62110 26.984 315 203 7 194 503 2 294 2.41e-21 97.8
MS.gene52434.t1 AT1G62150 26.848 257 174 3 248 503 57 300 5.20e-21 96.7
MS.gene52434.t1 AT5G23930 26.953 256 164 4 240 493 46 280 1.05e-16 83.6
MS.gene52434.t1 AT1G56380 24.390 369 218 11 250 574 28 379 4.35e-16 81.3
MS.gene52434.t1 AT1G56380 24.119 369 219 11 250 574 17 368 5.30e-16 80.9

Find 131 sgRNAs with CRISPR-Local

Find 279 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAGTTATGTCACTTTCTT+AGG 0.120233 2.3:-54360559 MS.gene52434:CDS
CATCCTTCATTGACTACTTT+TGG 0.124797 2.3:-54357947 MS.gene52434:CDS
CATTTGTTACTCTGATTCTA+AGG 0.165501 2.3:-54360678 MS.gene52434:CDS
CGAACAAGGCCATCTATATT+TGG 0.170334 2.3:-54358019 MS.gene52434:CDS
GATTTCTGCATAGGTGTTAT+TGG 0.176606 2.3:+54360754 None:intergenic
TTGGAGGAAGTTAAGGGTTT+AGG 0.192505 2.3:-54357974 MS.gene52434:CDS
ATCCTACACGCTTCATTTCT+TGG 0.196998 2.3:-54360916 MS.gene52434:CDS
CAAGTTTGTTTGCTCCTTTA+AGG 0.209354 2.3:-54357573 MS.gene52434:CDS
ATAATCAGATTCCTCCTTAA+AGG 0.220620 2.3:+54357559 None:intergenic
AATTCTAGCCGGGCTGGAGC+TGG 0.227795 2.3:-54360839 MS.gene52434:CDS
TGGAGGAAGTTAAGGGTTTA+GGG 0.236533 2.3:-54357973 MS.gene52434:CDS
AGGATTCTGGTGCGTGTTGC+GGG 0.241767 2.3:+54360934 None:intergenic
ACTAGAACACACGGTTGTTC+TGG 0.261883 2.3:-54358782 MS.gene52434:intron
AGACCAGCCCCATTTGTTAA+AGG 0.263441 2.3:+54357865 None:intergenic
TAACAATGATATTTGTTTAC+AGG 0.264991 2.3:+54360632 None:intergenic
TGGCATGCCATTCACAAATT+AGG 0.295156 2.3:-54357483 None:intergenic
ATGCCATTCTTTGTTTAATT+CGG 0.306732 2.3:-54358144 MS.gene52434:CDS
CATTCTTGATCTCTTGAACT+TGG 0.316429 2.3:-54360591 MS.gene52434:CDS
AAAGGATTTGATTAAGTCAT+TGG 0.323129 2.3:-54357993 MS.gene52434:CDS
ATTCTAGCCGGGCTGGAGCT+GGG 0.323689 2.3:-54360838 MS.gene52434:CDS
AGCTCAGGCCATCTGCTTGC+TGG 0.326856 2.3:-54361108 MS.gene52434:intron
AACTTCTCAGAATATCTAAA+TGG 0.329338 2.3:+54357605 None:intergenic
AAGCTAGATTTCAAAATTGT+AGG 0.330980 2.3:+54358226 None:intergenic
ACAAAACATCTGTGGTAGTT+TGG 0.331948 2.3:+54357721 None:intergenic
TACAACTACCATCAACATTT+AGG 0.339838 2.3:+54360867 None:intergenic
AAATGAAGCGTGTAGGATTC+TGG 0.341190 2.3:+54360921 None:intergenic
TCCTACCTCATTCACAAATT+CGG 0.344796 2.3:-54358598 MS.gene52434:CDS
GTCAATTTGATGTCTGAGTT+TGG 0.347188 2.3:-54358073 MS.gene52434:CDS
GCTAGCTTGTGTTAGCTTTG+AGG 0.354408 2.3:+54361128 None:intergenic
TGCGGTTGAGGTTGTTGATA+TGG 0.356705 2.3:+54358690 None:intergenic
ATTGAAACCAACATCAAATT+AGG 0.361121 2.3:+54357809 None:intergenic
TAAGTCATTGGAGGAAGTTA+AGG 0.377755 2.3:-54357981 MS.gene52434:CDS
GGTGATGGCAGCTGGGTTGT+CGG 0.382719 2.3:-54360800 MS.gene52434:CDS
GACATTCTTCGTATGGTTGT+AGG 0.384943 2.3:-54358358 MS.gene52434:intron
AAGAAGTTGAGAACTGAATC+TGG 0.385783 2.3:+54358514 None:intergenic
AGAATATTGGAGTGCGGTTG+AGG 0.397179 2.3:+54358678 None:intergenic
TCCTTTGAACCAAATATAGA+TGG 0.398078 2.3:+54358010 None:intergenic
ACAAAGAATGGCATCCTTGT+TGG 0.401490 2.3:+54358153 None:intergenic
TGTTTAGTCCTAAATGTTGA+TGG 0.404987 2.3:-54360875 MS.gene52434:CDS
AAGTTGACACCTTTAACAAA+TGG 0.405620 2.3:-54357874 MS.gene52434:CDS
TTGATCTCTTGAACTTGGAC+TGG 0.416343 2.3:-54360586 MS.gene52434:CDS
TGAGGAATCTTAGAGAATAT+TGG 0.425832 2.3:+54358665 None:intergenic
GCCATCTATATTTGGTTCAA+AGG 0.427799 2.3:-54358011 MS.gene52434:CDS
TTCTAGCCGGGCTGGAGCTG+GGG 0.431804 2.3:-54360837 MS.gene52434:CDS
GAAATTACCTAATTTGTGAA+TGG 0.433382 2.3:+54357476 None:intergenic
CTAGAACACACGGTTGTTCT+GGG 0.433934 2.3:-54358781 MS.gene52434:intron
AGTTGACACCTTTAACAAAT+GGG 0.435374 2.3:-54357873 MS.gene52434:CDS
CTCAACTTCTTCAAAAGTCA+TGG 0.435992 2.3:-54358502 MS.gene52434:CDS
TTAGACGTGGTGATGGCAGC+TGG 0.436481 2.3:-54360808 MS.gene52434:CDS
TCAATTGGGTTGGAATTCCT+TGG 0.440659 2.3:-54357750 MS.gene52434:CDS
AAGTCATTGGAGGAAGTTAA+GGG 0.441441 2.3:-54357980 MS.gene52434:CDS
GTGATGGCAGCTGGGTTGTC+GGG 0.441940 2.3:-54360799 MS.gene52434:CDS
GTCAGAGGTAGAAGCACCTT+TGG 0.453352 2.3:+54358378 None:intergenic
AGCTAGATTTCAAAATTGTA+GGG 0.454084 2.3:+54358227 None:intergenic
TGATCTCTTGAACTTGGACT+GGG 0.456553 2.3:-54360585 MS.gene52434:CDS
TACCTCTGACATTCTTCGTA+TGG 0.462578 2.3:-54358365 MS.gene52434:CDS
TTTCATGCAATGCCCACAAA+AGG 0.467899 2.3:-54358429 MS.gene52434:CDS
TATTTACCAAGGGTTGCGTC+TGG 0.475369 2.3:-54360726 MS.gene52434:CDS
ATTATCCACAGTAAGGTGAT+AGG 0.484709 2.3:+54358096 None:intergenic
CAAAGAATCACTGAGGAGAA+TGG 0.485989 2.3:+54360445 None:intergenic
TAGGATTCTGGTGCGTGTTG+CGG 0.489053 2.3:+54360933 None:intergenic
TCTAGCCGGGCTGGAGCTGG+GGG 0.491357 2.3:-54360836 MS.gene52434:CDS
ATGCCGAATTAAACAAAGAA+TGG 0.493192 2.3:+54358141 None:intergenic
TCTAAATGGTGTAACTAAGC+TGG 0.495852 2.3:+54357619 None:intergenic
TCCTTGCCAGACGCAACCCT+TGG 0.503866 2.3:+54360720 None:intergenic
AACATCGGAAAACGCTTCAA+CGG 0.504904 2.3:+54358742 None:intergenic
GAAGTTATGTCACTTTCTTA+GGG 0.506749 2.3:-54360558 MS.gene52434:CDS
TTTGGGTCAATCAATTGGGT+TGG 0.506924 2.3:-54357760 MS.gene52434:CDS
GTTGCAGCCTAATTTGATGT+TGG 0.507199 2.3:-54357816 MS.gene52434:CDS
AACGCTTCAACGGTGCTAGC+TGG 0.512780 2.3:+54358752 None:intergenic
TAACACCTATGCAGAAATCA+TGG 0.517614 2.3:-54360750 MS.gene52434:CDS
TTATGTCACTTTCTTAGGGA+AGG 0.518011 2.3:-54360554 MS.gene52434:CDS
ATTTGTTACTCTGATTCTAA+GGG 0.519585 2.3:-54360677 MS.gene52434:CDS
AGGTGTTATTGGAAAGTCCT+AGG 0.521193 2.3:+54360765 None:intergenic
GAATACCCGTGAAGATTTGA+AGG 0.524836 2.3:-54360468 MS.gene52434:CDS
GTTGTAGCGGTAATTCTAGC+CGG 0.528054 2.3:-54360850 MS.gene52434:CDS
GAATGGCCTTCAAATCTTCA+CGG 0.536494 2.3:+54360462 None:intergenic
AGCGGTAATTCTAGCCGGGC+TGG 0.537585 2.3:-54360845 MS.gene52434:CDS
ACACCTTTAACAAATGGGGC+TGG 0.542117 2.3:-54357868 MS.gene52434:CDS
AATTGCATAACTGAGGCCCT+TGG 0.542717 2.3:+54357674 None:intergenic
AAGCTAACACAAGCTAGCTC+AGG 0.544998 2.3:-54361123 MS.gene52434:CDS
GGATTCTGGTGCGTGTTGCG+GGG 0.545947 2.3:+54360935 None:intergenic
GTTCAAGAGATCAAGAATGT+TGG 0.550937 2.3:+54360595 None:intergenic
AATAGCCATGATTTCTGCAT+AGG 0.554457 2.3:+54360745 None:intergenic
ACCCCAAAAGTAGTCAATGA+AGG 0.557831 2.3:+54357944 None:intergenic
TTGCGTCTGGCAAGGAACTT+CGG 0.558270 2.3:-54360713 MS.gene52434:CDS
ACCAAGGGTTGCGTCTGGCA+AGG 0.558361 2.3:-54360721 MS.gene52434:CDS
TTGCTAGATTGCTTCGAACA+AGG 0.560619 2.3:-54358033 MS.gene52434:CDS
AATTGACATTATCCACAGTA+AGG 0.560808 2.3:+54358089 None:intergenic
AATGGCCTTCAAATCTTCAC+GGG 0.566242 2.3:+54360463 None:intergenic
TTGTAGCGGTAATTCTAGCC+GGG 0.567506 2.3:-54360849 MS.gene52434:CDS
TGGAGAAAAGGATCATTCCA+AGG 0.570897 2.3:-54357691 MS.gene52434:CDS
GGATTTGATTAAGTCATTGG+AGG 0.571043 2.3:-54357990 MS.gene52434:CDS
GGTCTGATTAGACGTGGTGA+TGG 0.572902 2.3:-54360815 MS.gene52434:CDS
GTCGGGTTCAGCAGCTACCT+AGG 0.577884 2.3:-54360782 MS.gene52434:CDS
GATTCTGGTGCGTGTTGCGG+GGG 0.580799 2.3:+54360936 None:intergenic
GAAATCATGGCTATTTACCA+AGG 0.581208 2.3:-54360737 MS.gene52434:CDS
TGGTAGTTTGGCAAGTGCCA+AGG 0.586106 2.3:+54357733 None:intergenic
TGAGGTTGTTGATATGGCAA+AGG 0.590012 2.3:+54358696 None:intergenic
TGAACAAACCAGCAAGCAGA+TGG 0.598334 2.3:+54361100 None:intergenic
GTTTGTTTGCTCCTTTAAGG+AGG 0.603996 2.3:-54357570 MS.gene52434:CDS
GCTCTAGTAACGACATCAAG+TGG 0.604439 2.3:-54360499 MS.gene52434:CDS
AGAAACCGAATTTGTGAATG+AGG 0.604803 2.3:+54358593 None:intergenic
ATCAGAGTAACAAATGATGT+AGG 0.606273 2.3:+54360685 None:intergenic
ACCGAATTTGTGAATGAGGT+AGG 0.607992 2.3:+54358597 None:intergenic
AATGAAACTTGCATACACAA+TGG 0.609213 2.3:-54357513 MS.gene52434:CDS
TAGACGTGGTGATGGCAGCT+GGG 0.614611 2.3:-54360807 MS.gene52434:CDS
TGAATTTGAATCTGAAGCGA+TGG 0.615539 2.3:+54358636 None:intergenic
TAACAATGCAACAATATCAG+AGG 0.616711 2.3:+54358258 None:intergenic
ACGACATCAAGTGGAAGTTG+TGG 0.618993 2.3:-54360490 MS.gene52434:CDS
TGAATCTGAAGCGATGGTAG+TGG 0.621211 2.3:+54358642 None:intergenic
AATGTTGATGGTAGTTGTAG+CGG 0.625886 2.3:-54360863 MS.gene52434:CDS
CAAAAGAAATTGCATAACTG+AGG 0.634260 2.3:+54357667 None:intergenic
GTTGACACCTTTAACAAATG+GGG 0.635802 2.3:-54357872 MS.gene52434:CDS
GCATTGCATGAAAGAAGCCA+TGG 0.636869 2.3:+54358439 None:intergenic
AAACTAAAACAAAACATCTG+TGG 0.637333 2.3:+54357713 None:intergenic
GGAGAAAAGGATCATTCCAA+GGG 0.639024 2.3:-54357690 MS.gene52434:CDS
TTGATATGGCAAAGGCCTTG+CGG 0.640767 2.3:+54358704 None:intergenic
TCTCTTGAACTTGGACTGGG+AGG 0.644353 2.3:-54360582 MS.gene52434:CDS
GCATACACAATGGAAAACAA+TGG 0.644592 2.3:-54357503 MS.gene52434:CDS
AAATCATGGCTATTTACCAA+GGG 0.645063 2.3:-54360736 MS.gene52434:CDS
CTGAAGCGATGGTAGTGGTG+AGG 0.647119 2.3:+54358647 None:intergenic
TCTTAGAGAATATTGGAGTG+CGG 0.670463 2.3:+54358672 None:intergenic
AACCATACGAAGAATGTCAG+AGG 0.672395 2.3:+54358363 None:intergenic
TGCCAAGAAATGAAGCGTGT+AGG 0.673737 2.3:+54360914 None:intergenic
GAATACCTATCACCTTACTG+TGG 0.678196 2.3:-54358101 MS.gene52434:CDS
TAGGGAAGGATATGCTAGTG+CGG 0.679378 2.3:-54360540 MS.gene52434:CDS
GCATCATCAAAAGAGAACCA+TGG 0.694296 2.3:-54358456 MS.gene52434:CDS
TAGGTTTCTGAAAACCAACA+AGG 0.701717 2.3:-54358167 MS.gene52434:CDS
ATAAATCTAACTAGAACACA+CGG 0.720272 2.3:-54358791 MS.gene52434:intron
TTATCTATTAAAGCTATACG+AGG 0.742253 2.3:-54357540 MS.gene52434:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATAAATAATGAAGAT+TGG + chr2.3:54358958-54358977 None:intergenic 10.0%
!! AAAAATAAATAATGAAGATT+GGG + chr2.3:54358957-54358976 None:intergenic 10.0%
!! TTTCATTGTTATAAAAATAA+GGG + chr2.3:54359072-54359091 None:intergenic 10.0%
!!! TTTTCATTGTTATAAAAATA+AGG + chr2.3:54359073-54359092 None:intergenic 10.0%
!! AAAATAAATAATGAAGATTG+GGG + chr2.3:54358956-54358975 None:intergenic 15.0%
!! AAAATGTAATTATTAAAAGG+AGG + chr2.3:54359251-54359270 None:intergenic 15.0%
!! AAGCTCATTATAAATTTATA+AGG - chr2.3:54358443-54358462 MS.gene52434:CDS 15.0%
!! TACTTAAAAATTCAAAAAGA+GGG + chr2.3:54360452-54360471 None:intergenic 15.0%
!! TGATTAAAAATTGAAACTTT+GGG + chr2.3:54360239-54360258 None:intergenic 15.0%
!! TTCAAAAAGATGAAAATTAT+AGG - chr2.3:54359369-54359388 MS.gene52434:intron 15.0%
!! TTGAACTATAAGAAATATAA+TGG - chr2.3:54359408-54359427 MS.gene52434:intron 15.0%
!!! AATTTTATTTTTTGGTACAT+TGG + chr2.3:54358299-54358318 None:intergenic 15.0%
!!! TTTTTGAAAATCACAAATTA+GGG + chr2.3:54359357-54359376 None:intergenic 15.0%
!! AACTATAAGAAATATAATGG+AGG - chr2.3:54359411-54359430 MS.gene52434:intron 20.0%
!! AATAGAAAAAGTTTCAACAT+CGG + chr2.3:54359913-54359932 None:intergenic 20.0%
!! AATGTATGAGTAAAAAACTT+TGG - chr2.3:54360733-54360752 MS.gene52434:CDS 20.0%
!! ACAATTCTAAGCATAATTTA+AGG + chr2.3:54359689-54359708 None:intergenic 20.0%
!! AGTTATAATTCAATCTTCAA+GGG - chr2.3:54359132-54359151 MS.gene52434:intron 20.0%
!! ATGTATGAGTAAAAAACTTT+GGG - chr2.3:54360734-54360753 MS.gene52434:CDS 20.0%
!! CAGAAATTGTAGATTTATAA+TGG + chr2.3:54359044-54359063 None:intergenic 20.0%
!! CTACTTAAAAATTCAAAAAG+AGG + chr2.3:54360453-54360472 None:intergenic 20.0%
!! GTGATTAAAAATTGAAACTT+TGG + chr2.3:54360240-54360259 None:intergenic 20.0%
!! TAACAATGATATTTGTTTAC+AGG + chr2.3:54358008-54358027 None:intergenic 20.0%
!! TACTCATTTGAATTTGAATT+TGG - chr2.3:54359781-54359800 MS.gene52434:intron 20.0%
!! TCAAAAAATTGAATGGAAAA+TGG - chr2.3:54358329-54358348 MS.gene52434:intron 20.0%
!! TGTAGATTTATAATGGTAAA+TGG + chr2.3:54359037-54359056 None:intergenic 20.0%
!! TTACTTGTCAAAAAATTGAA+TGG - chr2.3:54358322-54358341 MS.gene52434:intron 20.0%
!! TTATTGCATGAATTTACTTA+TGG + chr2.3:54359203-54359222 None:intergenic 20.0%
!!! AATTTAAAGGTATTGCTAAT+AGG - chr2.3:54358508-54358527 MS.gene52434:CDS 20.0%
!!! CTCTTTTTGAATTTTTAAGT+AGG - chr2.3:54360451-54360470 MS.gene52434:intron 20.0%
!!! CTTTTTGAAAATCACAAATT+AGG + chr2.3:54359358-54359377 None:intergenic 20.0%
!!! TTTCAATTTTTAATCACCAA+AGG - chr2.3:54360243-54360262 MS.gene52434:intron 20.0%
!!! TTTCATTTTTTTCTATCCAA+AGG - chr2.3:54360348-54360367 MS.gene52434:intron 20.0%
! AAAAACAACAACAACAACAA+AGG + chr2.3:54358244-54358263 None:intergenic 25.0%
! AAAAATTGAATGGAAAATGG+AGG - chr2.3:54358332-54358351 MS.gene52434:intron 25.0%
! AAACTAAAACAAAACATCTG+TGG + chr2.3:54360927-54360946 None:intergenic 25.0%
! AAAGGATTTGATTAAGTCAT+TGG - chr2.3:54360644-54360663 MS.gene52434:CDS 25.0%
! AACTTCTCAGAATATCTAAA+TGG + chr2.3:54361035-54361054 None:intergenic 25.0%
! AAGCTAGATTTCAAAATTGT+AGG + chr2.3:54360414-54360433 None:intergenic 25.0%
! AATCAATGGATCATATTTGT+TGG + chr2.3:54359598-54359617 None:intergenic 25.0%
! AATTATAAAGCCAAAACCTA+TGG - chr2.3:54359713-54359732 MS.gene52434:intron 25.0%
! AGCTAGATTTCAAAATTGTA+GGG + chr2.3:54360413-54360432 None:intergenic 25.0%
! ATAAATCTAACTAGAACACA+CGG - chr2.3:54359846-54359865 MS.gene52434:intron 25.0%
! ATTCTAAGCATAATTTAAGG+TGG + chr2.3:54359686-54359705 None:intergenic 25.0%
! ATTGAAACCAACATCAAATT+AGG + chr2.3:54360831-54360850 None:intergenic 25.0%
! GAGTTATAATTCAATCTTCA+AGG - chr2.3:54359131-54359150 MS.gene52434:intron 25.0%
! TAAATCATAACTTAGACTCT+TGG + chr2.3:54357602-54357621 None:intergenic 25.0%
! TCATGCAATAAAACATGTTT+GGG - chr2.3:54359212-54359231 MS.gene52434:intron 25.0%
! TTACAGTTGGATTTAATCAA+TGG + chr2.3:54359612-54359631 None:intergenic 25.0%
! TTATCTATTAAAGCTATACG+AGG - chr2.3:54361097-54361116 MS.gene52434:intron 25.0%
! TTCATGCAATAAAACATGTT+TGG - chr2.3:54359211-54359230 MS.gene52434:intron 25.0%
!! AAACTTGATTTGACGAATTT+AGG + chr2.3:54360309-54360328 None:intergenic 25.0%
!! AACTTGATTTGACGAATTTA+GGG + chr2.3:54360308-54360327 None:intergenic 25.0%
!! ACTAAACAATTTTCTCTAGA+AGG + chr2.3:54357750-54357769 None:intergenic 25.0%
!! ATAATTTAAGGTGGATTCTA+GGG + chr2.3:54359677-54359696 None:intergenic 25.0%
!! ATGAATTCAAGTTCAACAAT+AGG - chr2.3:54359812-54359831 MS.gene52434:intron 25.0%
!! ATGCAATTTCTTTTGATGAA+AGG - chr2.3:54360978-54360997 MS.gene52434:intron 25.0%
!! ATGCCATTCTTTGTTTAATT+CGG - chr2.3:54360493-54360512 MS.gene52434:CDS 25.0%
!! ATTTGTTACTCTGATTCTAA+GGG - chr2.3:54357960-54357979 MS.gene52434:CDS 25.0%
!! GAAATATAATGGAGGATAAA+TGG - chr2.3:54359419-54359438 MS.gene52434:intron 25.0%
!! TGAATTCAAGTTCAACAATA+GGG - chr2.3:54359813-54359832 MS.gene52434:intron 25.0%
!! TGATTCGATAATGAGTTTTT+GGG - chr2.3:54360860-54360879 MS.gene52434:CDS 25.0%
!! TTTAGAGATTAAAAAGGTGT+TGG + chr2.3:54359175-54359194 None:intergenic 25.0%
!!! ACAGATGTTTTGTTTTAGTT+TGG - chr2.3:54360926-54360945 MS.gene52434:CDS 25.0%
!!! GTACGTTTTAGAGATTAAAA+AGG + chr2.3:54359181-54359200 None:intergenic 25.0%
!!! TACAATTTTGAAATCTAGCT+TGG - chr2.3:54360413-54360432 MS.gene52434:intron 25.0%
!!! TTGATTCGATAATGAGTTTT+TGG - chr2.3:54360859-54360878 MS.gene52434:CDS 25.0%
!!! TTTGTTTTAGTTTGGAGAAA+AGG - chr2.3:54360934-54360953 MS.gene52434:CDS 25.0%
!!! TTTTTTACTCATACATTGCT+TGG + chr2.3:54360730-54360749 None:intergenic 25.0%
AAATCATGGCTATTTACCAA+GGG - chr2.3:54357901-54357920 MS.gene52434:CDS 30.0%
AACATACATCTTTGGATTCT+AGG - chr2.3:54358771-54358790 MS.gene52434:CDS 30.0%
AAGTTGACACCTTTAACAAA+TGG - chr2.3:54360763-54360782 MS.gene52434:CDS 30.0%
AATCAATACATTGAGATTGG+TGG + chr2.3:54358366-54358385 None:intergenic 30.0%
AATGAAACTTGCATACACAA+TGG - chr2.3:54361124-54361143 MS.gene52434:CDS 30.0%
AATTGACATTATCCACAGTA+AGG + chr2.3:54360551-54360570 None:intergenic 30.0%
ACATACATCTTTGGATTCTA+GGG - chr2.3:54358772-54358791 MS.gene52434:CDS 30.0%
AGATAAGAACAATTTGGACT+TGG - chr2.3:54359446-54359465 MS.gene52434:intron 30.0%
AGATGAGATAAAATTGTGTG+TGG - chr2.3:54359544-54359563 MS.gene52434:intron 30.0%
AGTTGACACCTTTAACAAAT+GGG - chr2.3:54360764-54360783 MS.gene52434:CDS 30.0%
ATAATCAGATTCCTCCTTAA+AGG + chr2.3:54361081-54361100 None:intergenic 30.0%
ATCAGAGTAACAAATGATGT+AGG + chr2.3:54357955-54357974 None:intergenic 30.0%
ATGCCGAATTAAACAAAGAA+TGG + chr2.3:54360499-54360518 None:intergenic 30.0%
CAAAAGAAATTGCATAACTG+AGG + chr2.3:54360973-54360992 None:intergenic 30.0%
CATTACAGGATTGAATTTCA+TGG + chr2.3:54359324-54359343 None:intergenic 30.0%
GGTGAAAGATAAGAACAATT+TGG - chr2.3:54359440-54359459 MS.gene52434:intron 30.0%
GTGAATCAATACATTGAGAT+TGG + chr2.3:54358369-54358388 None:intergenic 30.0%
GTTATAGTGTGTTATGATTC+TGG + chr2.3:54359015-54359034 None:intergenic 30.0%
TAAAGCATGATAAGCAAAAG+AGG - chr2.3:54357624-54357643 MS.gene52434:CDS 30.0%
TAACAATGCAACAATATCAG+AGG + chr2.3:54360382-54360401 None:intergenic 30.0%
TACAACTACCATCAACATTT+AGG + chr2.3:54357773-54357792 None:intergenic 30.0%
TCCTTTGAACCAAATATAGA+TGG + chr2.3:54360630-54360649 None:intergenic 30.0%
TGAGGAATCTTAGAGAATAT+TGG + chr2.3:54359975-54359994 None:intergenic 30.0%
TGATTGTATTCAATGAAGTC+TGG + chr2.3:54359099-54359118 None:intergenic 30.0%
TGTTTAGTCCTAAATGTTGA+TGG - chr2.3:54357762-54357781 MS.gene52434:CDS 30.0%
TTACGGTTGGATTTAATCAA+TGG - chr2.3:54358837-54358856 MS.gene52434:intron 30.0%
! CATAATTTAAGGTGGATTCT+AGG + chr2.3:54359678-54359697 None:intergenic 30.0%
! CATTTGTTACTCTGATTCTA+AGG - chr2.3:54357959-54357978 MS.gene52434:CDS 30.0%
! GAATTCAAGTTCAACAATAG+GGG - chr2.3:54359814-54359833 MS.gene52434:intron 30.0%
!! ATCCTTCATTGACTACTTTT+GGG - chr2.3:54360691-54360710 MS.gene52434:CDS 30.0%
!! CAGTTTGTTGTGAAGTATAA+GGG - chr2.3:54357573-54357592 MS.gene52434:CDS 30.0%
!! GAAGTTATGTCACTTTCTTA+GGG - chr2.3:54358079-54358098 MS.gene52434:CDS 30.0%
!! TCAGTTTGTTGTGAAGTATA+AGG - chr2.3:54357572-54357591 MS.gene52434:CDS 30.0%
!! TGAAGTTATGTCACTTTCTT+AGG - chr2.3:54358078-54358097 MS.gene52434:CDS 30.0%
!!! AGTTTTTGGGTCAATCAATT+GGG - chr2.3:54360873-54360892 MS.gene52434:CDS 30.0%
!!! GGTTTTGAAACGAAGATTTT+TGG + chr2.3:54360094-54360113 None:intergenic 30.0%
AAACTGGCAACATACATCTT+TGG - chr2.3:54358763-54358782 MS.gene52434:CDS 35.0%
AAGAAGTTGAGAACTGAATC+TGG + chr2.3:54360126-54360145 None:intergenic 35.0%
AAGAGGTTAAGTACACAACT+TGG - chr2.3:54357641-54357660 MS.gene52434:CDS 35.0%
AAGTCATTGGAGGAAGTTAA+GGG - chr2.3:54360657-54360676 MS.gene52434:CDS 35.0%
AATAGCCATGATTTCTGCAT+AGG + chr2.3:54357895-54357914 None:intergenic 35.0%
AATGACCATGGTAATCATGA+AGG - chr2.3:54358408-54358427 MS.gene52434:CDS 35.0%
ACAAAACATCTGTGGTAGTT+TGG + chr2.3:54360919-54360938 None:intergenic 35.0%
AGAAACCGAATTTGTGAATG+AGG + chr2.3:54360047-54360066 None:intergenic 35.0%
AGGGTTATCAAAGTCATTAC+AGG + chr2.3:54359338-54359357 None:intergenic 35.0%
ATACAAGAGAAGAGAAAGGA+AGG - chr2.3:54359484-54359503 MS.gene52434:intron 35.0%
ATACCAATACCTAATGACCA+TGG - chr2.3:54358396-54358415 MS.gene52434:CDS 35.0%
ATCCAACTGTAATTTCTTCG+TGG - chr2.3:54359620-54359639 MS.gene52434:intron 35.0%
ATTATCCACAGTAAGGTGAT+AGG + chr2.3:54360544-54360563 None:intergenic 35.0%
CAACAAAGGAATTAAACACG+AGG + chr2.3:54358230-54358249 None:intergenic 35.0%
CATTCTTGATCTCTTGAACT+TGG - chr2.3:54358046-54358065 MS.gene52434:CDS 35.0%
CTCAACTTCTTCAAAAGTCA+TGG - chr2.3:54360135-54360154 MS.gene52434:intron 35.0%
GAAATCATGGCTATTTACCA+AGG - chr2.3:54357900-54357919 MS.gene52434:CDS 35.0%
GAAGTCTCAAACACTGTTTA+AGG + chr2.3:54358634-54358653 None:intergenic 35.0%
GAATTAAACACGAGGAACAA+GGG + chr2.3:54358222-54358241 None:intergenic 35.0%
GCATACACAATGGAAAACAA+TGG - chr2.3:54361134-54361153 MS.gene52434:CDS 35.0%
GGATTTGATTAAGTCATTGG+AGG - chr2.3:54360647-54360666 MS.gene52434:CDS 35.0%
GTACATTGGCAAAACTAAAC+AGG + chr2.3:54358285-54358304 None:intergenic 35.0%
GTCAATTTGATGTCTGAGTT+TGG - chr2.3:54360564-54360583 MS.gene52434:CDS 35.0%
GTTCAAGAGATCAAGAATGT+TGG + chr2.3:54358045-54358064 None:intergenic 35.0%
GTTGACACCTTTAACAAATG+GGG - chr2.3:54360765-54360784 MS.gene52434:CDS 35.0%
GTTGATACAAGAGAAGAGAA+AGG - chr2.3:54359480-54359499 MS.gene52434:intron 35.0%
TAACACCTATGCAGAAATCA+TGG - chr2.3:54357887-54357906 MS.gene52434:CDS 35.0%
TAAGAACAATTTGGACTTGG+AGG - chr2.3:54359449-54359468 MS.gene52434:intron 35.0%
TAAGTCATTGGAGGAAGTTA+AGG - chr2.3:54360656-54360675 MS.gene52434:CDS 35.0%
TACAAGAGAAGAGAAAGGAA+GGG - chr2.3:54359485-54359504 MS.gene52434:intron 35.0%
TCATGATTACCATGGTCATT+AGG + chr2.3:54358408-54358427 None:intergenic 35.0%
TCCTACCTCATTCACAAATT+CGG - chr2.3:54360039-54360058 MS.gene52434:intron 35.0%
TCTAAATGGTGTAACTAAGC+TGG + chr2.3:54361021-54361040 None:intergenic 35.0%
TCTTAGAGAATATTGGAGTG+CGG + chr2.3:54359968-54359987 None:intergenic 35.0%
TGATGAATCTGCGAAAAAAC+TGG - chr2.3:54358747-54358766 MS.gene52434:CDS 35.0%
TTACACCTTCATGATTACCA+TGG + chr2.3:54358416-54358435 None:intergenic 35.0%
TTACCATGGTCATTAGGTAT+TGG + chr2.3:54358402-54358421 None:intergenic 35.0%
! ATTCGAGAAACCATAGGTTT+TGG + chr2.3:54359726-54359745 None:intergenic 35.0%
! CAAGTTTGTTTGCTCCTTTA+AGG - chr2.3:54361064-54361083 MS.gene52434:intron 35.0%
! GATTTCTGCATAGGTGTTAT+TGG + chr2.3:54357886-54357905 None:intergenic 35.0%
! GCCATCTATATTTGGTTCAA+AGG - chr2.3:54360626-54360645 MS.gene52434:CDS 35.0%
! TAGGTTTCTGAAAACCAACA+AGG - chr2.3:54360470-54360489 MS.gene52434:CDS 35.0%
! TGAATTTGAATCTGAAGCGA+TGG + chr2.3:54360004-54360023 None:intergenic 35.0%
!! AATGTTGATGGTAGTTGTAG+CGG - chr2.3:54357774-54357793 MS.gene52434:CDS 35.0%
!! CATCCTTCATTGACTACTTT+TGG - chr2.3:54360690-54360709 MS.gene52434:CDS 35.0%
!! GAAACTTTTTCTATTCCGCA+AGG - chr2.3:54359918-54359937 MS.gene52434:intron 35.0%
!! GGATTGACTTTTCATCTGTT+CGG - chr2.3:54358464-54358483 MS.gene52434:CDS 35.0%
!! TCCTTCATTGACTACTTTTG+GGG - chr2.3:54360692-54360711 MS.gene52434:CDS 35.0%
!! TTATGTCACTTTCTTAGGGA+AGG - chr2.3:54358083-54358102 MS.gene52434:CDS 35.0%
!!! AACTGAATCTGGTTTTTGTG+AGG + chr2.3:54360115-54360134 None:intergenic 35.0%
!!! ATCCAACCGTAATTTTTTCG+TGG + chr2.3:54358829-54358848 None:intergenic 35.0%
!!! GAGTTTTTGGGTCAATCAAT+TGG - chr2.3:54360872-54360891 MS.gene52434:CDS 35.0%
AAATGAAGCGTGTAGGATTC+TGG + chr2.3:54357719-54357738 None:intergenic 40.0%
AACATCGGAAAACGCTTCAA+CGG + chr2.3:54359898-54359917 None:intergenic 40.0%
AACCATACGAAGAATGTCAG+AGG + chr2.3:54360277-54360296 None:intergenic 40.0%
AATGGCCTTCAAATCTTCAC+GGG + chr2.3:54358177-54358196 None:intergenic 40.0%
ACAAAGAATGGCATCCTTGT+TGG + chr2.3:54360487-54360506 None:intergenic 40.0%
ACCCCAAAAGTAGTCAATGA+AGG + chr2.3:54360696-54360715 None:intergenic 40.0%
ACCGAATTTGTGAATGAGGT+AGG + chr2.3:54360043-54360062 None:intergenic 40.0%
ATAATGAAGATTGGGGCTGA+TGG + chr2.3:54358949-54358968 None:intergenic 40.0%
ATCCTACACGCTTCATTTCT+TGG - chr2.3:54357721-54357740 MS.gene52434:CDS 40.0%
CAAAGAATCACTGAGGAGAA+TGG + chr2.3:54358195-54358214 None:intergenic 40.0%
CAAGGGAATAAAGTCCACTT+TGG - chr2.3:54359149-54359168 MS.gene52434:intron 40.0%
CCAAACATTCGAGAAACCAT+AGG + chr2.3:54359732-54359751 None:intergenic 40.0%
CCTATGGTTTCTCGAATGTT+TGG - chr2.3:54359729-54359748 MS.gene52434:intron 40.0%
CGAACAAGGCCATCTATATT+TGG - chr2.3:54360618-54360637 MS.gene52434:CDS 40.0%
GAATACCCGTGAAGATTTGA+AGG - chr2.3:54358169-54358188 MS.gene52434:CDS 40.0%
GAATACCTATCACCTTACTG+TGG - chr2.3:54360536-54360555 MS.gene52434:CDS 40.0%
GAATGGCCTTCAAATCTTCA+CGG + chr2.3:54358178-54358197 None:intergenic 40.0%
GACATTCTTCGTATGGTTGT+AGG - chr2.3:54360279-54360298 MS.gene52434:intron 40.0%
GACCACGAAAAAATTACGGT+TGG - chr2.3:54358824-54358843 MS.gene52434:intron 40.0%
GACCACGAAGAAATTACAGT+TGG + chr2.3:54359625-54359644 None:intergenic 40.0%
GCATCATCAAAAGAGAACCA+TGG - chr2.3:54360181-54360200 MS.gene52434:intron 40.0%
GGAATTAAACACGAGGAACA+AGG + chr2.3:54358223-54358242 None:intergenic 40.0%
GGAGAAAAGGATCATTCCAA+GGG - chr2.3:54360947-54360966 MS.gene52434:intron 40.0%
GGTGGACCACGAAAAAATTA+CGG - chr2.3:54358820-54358839 MS.gene52434:intron 40.0%
GTTGCAGCCTAATTTGATGT+TGG - chr2.3:54360821-54360840 MS.gene52434:CDS 40.0%
TACCTCTGACATTCTTCGTA+TGG - chr2.3:54360272-54360291 MS.gene52434:intron 40.0%
TGAGGTTGTTGATATGGCAA+AGG + chr2.3:54359944-54359963 None:intergenic 40.0%
TGATCTCTTGAACTTGGACT+GGG - chr2.3:54358052-54358071 MS.gene52434:CDS 40.0%
TGGAGAAAAGGATCATTCCA+AGG - chr2.3:54360946-54360965 MS.gene52434:CDS 40.0%
TGGAGGAAGTTAAGGGTTTA+GGG - chr2.3:54360664-54360683 MS.gene52434:CDS 40.0%
TTCTCCTCAGTGATTCTTTG+AGG - chr2.3:54358195-54358214 MS.gene52434:CDS 40.0%
TTGATCTCTTGAACTTGGAC+TGG - chr2.3:54358051-54358070 MS.gene52434:CDS 40.0%
TTGCTAGATTGCTTCGAACA+AGG - chr2.3:54360604-54360623 MS.gene52434:CDS 40.0%
TTGGAGGAAGTTAAGGGTTT+AGG - chr2.3:54360663-54360682 MS.gene52434:CDS 40.0%
TTTCATGCAATGCCCACAAA+AGG - chr2.3:54360208-54360227 MS.gene52434:intron 40.0%
TTTGGGTCAATCAATTGGGT+TGG - chr2.3:54360877-54360896 MS.gene52434:CDS 40.0%
! GTTTGTTTGCTCCTTTAAGG+AGG - chr2.3:54361067-54361086 MS.gene52434:intron 40.0%
! TATGCGTGTGCTCAAACTTT+TGG - chr2.3:54359283-54359302 MS.gene52434:intron 40.0%
!! ACTTTGGGAGAATCCTTTTG+TGG + chr2.3:54360224-54360243 None:intergenic 40.0%
!! AGGTGTTATTGGAAAGTCCT+AGG + chr2.3:54357875-54357894 None:intergenic 40.0%
!! ATCTTTGGATTCTAGGGTGA+GGG - chr2.3:54358778-54358797 MS.gene52434:CDS 40.0%
!! CGGTGATGGAACTAACAAAA+GGG - chr2.3:54359509-54359528 MS.gene52434:intron 40.0%
!! CTTTGGGAGAATCCTTTTGT+GGG + chr2.3:54360223-54360242 None:intergenic 40.0%
!! GCTGGTTTGTTCATAGAAGA+AGG - chr2.3:54357547-54357566 MS.gene52434:CDS 40.0%
!! TAAAAAGGTGTTGGCCAAAG+TGG + chr2.3:54359166-54359185 None:intergenic 40.0%
!! TCAATTGGGTTGGAATTCCT+TGG - chr2.3:54360887-54360906 MS.gene52434:CDS 40.0%
!! TCGGTGATGGAACTAACAAA+AGG - chr2.3:54359508-54359527 MS.gene52434:intron 40.0%
!!! GTAATTTTTTCGTGGTCCAC+CGG + chr2.3:54358821-54358840 None:intergenic 40.0%
AAGCTAACACAAGCTAGCTC+AGG - chr2.3:54357514-54357533 MS.gene52434:CDS 45.0%
AATTGCATAACTGAGGCCCT+TGG + chr2.3:54360966-54360985 None:intergenic 45.0%
ACACCTTTAACAAATGGGGC+TGG - chr2.3:54360769-54360788 MS.gene52434:CDS 45.0%
ACGACATCAAGTGGAAGTTG+TGG - chr2.3:54358147-54358166 MS.gene52434:CDS 45.0%
ACTAGAACACACGGTTGTTC+TGG - chr2.3:54359855-54359874 MS.gene52434:intron 45.0%
AGAATATTGGAGTGCGGTTG+AGG + chr2.3:54359962-54359981 None:intergenic 45.0%
AGAGAAGAGAAAGGAAGGGT+CGG - chr2.3:54359489-54359508 MS.gene52434:intron 45.0%
CTAGAACACACGGTTGTTCT+GGG - chr2.3:54359856-54359875 MS.gene52434:intron 45.0%
GCATTGCATGAAAGAAGCCA+TGG + chr2.3:54360201-54360220 None:intergenic 45.0%
GCTCTAGTAACGACATCAAG+TGG - chr2.3:54358138-54358157 MS.gene52434:CDS 45.0%
GGATCAATTAAGTCCCTCAC+CGG - chr2.3:54358799-54358818 MS.gene52434:intron 45.0%
GGATCAATTAAGTCCCTCAC+TGG + chr2.3:54358818-54358799 None:intergenic 45.0%
GTTGTAGCGGTAATTCTAGC+CGG - chr2.3:54357787-54357806 MS.gene52434:CDS 45.0%
TAGGGAAGGATATGCTAGTG+CGG - chr2.3:54358097-54358116 MS.gene52434:CDS 45.0%
TATTTACCAAGGGTTGCGTC+TGG - chr2.3:54357911-54357930 MS.gene52434:CDS 45.0%
TCAATTAAGTCCCTCACTGG+TGG + chr2.3:54359647-54359666 None:intergenic 45.0%
TGAACAAACCAGCAAGCAGA+TGG + chr2.3:54357540-54357559 None:intergenic 45.0%
TGCCAAGAAATGAAGCGTGT+AGG + chr2.3:54357726-54357745 None:intergenic 45.0%
TGCGGTTGAGGTTGTTGATA+TGG + chr2.3:54359950-54359969 None:intergenic 45.0%
TTGATATGGCAAAGGCCTTG+CGG + chr2.3:54359936-54359955 None:intergenic 45.0%
TTGTAGCGGTAATTCTAGCC+GGG - chr2.3:54357788-54357807 MS.gene52434:CDS 45.0%
! AGACCAGCCCCATTTGTTAA+AGG + chr2.3:54360775-54360794 None:intergenic 45.0%
! TGAATCTGAAGCGATGGTAG+TGG + chr2.3:54359998-54360017 None:intergenic 45.0%
! TGCGGATTTTCTCGCAAAGT+GGG - chr2.3:54358115-54358134 MS.gene52434:CDS 45.0%
!! ATCAGAGGAAGAAGCACCTT+TGG + chr2.3:54360367-54360386 None:intergenic 45.0%
!! CATCTTTGGATTCTAGGGTG+AGG - chr2.3:54358777-54358796 MS.gene52434:CDS 45.0%
!! GCTAGCTTGTGTTAGCTTTG+AGG + chr2.3:54357512-54357531 None:intergenic 45.0%
!! TAAGGTGGATTCTAGGGTGA+GGG + chr2.3:54359671-54359690 None:intergenic 45.0%
!! TTAAGGTGGATTCTAGGGTG+AGG + chr2.3:54359672-54359691 None:intergenic 45.0%
!!! GACTACTTTTGGGGTTGCTT+TGG - chr2.3:54360701-54360720 MS.gene52434:CDS 45.0%
!! AAAAAAATGTAATTATTAAA+AGG + chr2.3:54359254-54359273 None:intergenic 5.0%
!!! AGTAAATAAATTTTATTTTT+TGG + chr2.3:54358307-54358326 None:intergenic 5.0%
!!! GTATATTTAATTTAATTTAA+AGG - chr2.3:54358495-54358514 MS.gene52434:CDS 5.0%
!!! TTTAATAATTACATTTTTTT+TGG - chr2.3:54359254-54359273 MS.gene52434:intron 5.0%
AGGAGGAAGAAGAGAAGAGG+TGG + chr2.3:54358921-54358940 None:intergenic 50.0%
CGTAGGAGGAAGAAGAGAAG+AGG + chr2.3:54358924-54358943 None:intergenic 50.0%
GGAGGAAGAAGAGAAGAGGT+GGG + chr2.3:54358920-54358939 None:intergenic 50.0%
GGGTCCTCAAAGAATCACTG+AGG + chr2.3:54358202-54358221 None:intergenic 50.0%
GGTCTGATTAGACGTGGTGA+TGG - chr2.3:54357822-54357841 MS.gene52434:CDS 50.0%
TAGGATTCTGGTGCGTGTTG+CGG + chr2.3:54357707-54357726 None:intergenic 50.0%
TCAATTAAGTCCCTCACCGG+TGG - chr2.3:54358802-54358821 MS.gene52434:intron 50.0%
TGGTAGTTTGGCAAGTGCCA+AGG + chr2.3:54360907-54360926 None:intergenic 50.0%
TTGCGTCTGGCAAGGAACTT+CGG - chr2.3:54357924-54357943 MS.gene52434:CDS 50.0%
! GCGGATTTTCTCGCAAAGTG+GGG - chr2.3:54358116-54358135 MS.gene52434:CDS 50.0%
! GTGCGGATTTTCTCGCAAAG+TGG - chr2.3:54358114-54358133 MS.gene52434:CDS 50.0%
! TCTCTTGAACTTGGACTGGG+AGG - chr2.3:54358055-54358074 MS.gene52434:CDS 50.0%
!! GTCAGAGGTAGAAGCACCTT+TGG + chr2.3:54360262-54360281 None:intergenic 50.0%
AGGATTCTGGTGCGTGTTGC+GGG + chr2.3:54357706-54357725 None:intergenic 55.0%
GAGAAAGGAAGGGTCGGTGA+TGG - chr2.3:54359495-54359514 MS.gene52434:intron 55.0%
GATTGGGGCTGATGGAACGT+AGG + chr2.3:54358941-54358960 None:intergenic 55.0%
TCTTCGTGGTCCACCAGTGA+GGG - chr2.3:54359634-54359653 MS.gene52434:intron 55.0%
TTCTTCGTGGTCCACCAGTG+AGG - chr2.3:54359633-54359652 MS.gene52434:intron 55.0%
! AACGCTTCAACGGTGCTAGC+TGG + chr2.3:54359888-54359907 None:intergenic 55.0%
! TTTTCGTGGTCCACCGGTGA+GGG + chr2.3:54358815-54358834 None:intergenic 55.0%
! TTTTTCGTGGTCCACCGGTG+AGG + chr2.3:54358816-54358835 None:intergenic 55.0%
!! CTGAAGCGATGGTAGTGGTG+AGG + chr2.3:54359993-54360012 None:intergenic 55.0%
!! TAGACGTGGTGATGGCAGCT+GGG - chr2.3:54357830-54357849 MS.gene52434:CDS 55.0%
!! TTAGACGTGGTGATGGCAGC+TGG - chr2.3:54357829-54357848 MS.gene52434:CDS 55.0%
ACCAAGGGTTGCGTCTGGCA+AGG - chr2.3:54357916-54357935 MS.gene52434:CDS 60.0%
AGCGGTAATTCTAGCCGGGC+TGG - chr2.3:54357792-54357811 MS.gene52434:CDS 60.0%
AGCTCAGGCCATCTGCTTGC+TGG - chr2.3:54357529-54357548 MS.gene52434:CDS 60.0%
GATTCTGGTGCGTGTTGCGG+GGG + chr2.3:54357704-54357723 None:intergenic 60.0%
GCTGGGGGTCTGATTAGACG+TGG - chr2.3:54357816-54357835 MS.gene52434:CDS 60.0%
GGATTCTGGTGCGTGTTGCG+GGG + chr2.3:54357705-54357724 None:intergenic 60.0%
GTCGGGTTCAGCAGCTACCT+AGG - chr2.3:54357855-54357874 MS.gene52434:CDS 60.0%
GTGATGGCAGCTGGGTTGTC+GGG - chr2.3:54357838-54357857 MS.gene52434:CDS 60.0%
TCCTTGCCAGACGCAACCCT+TGG + chr2.3:54357920-54357939 None:intergenic 60.0%
TGGGGCTGATGGAACGTAGG+AGG + chr2.3:54358938-54358957 None:intergenic 60.0%
! AATTCTAGCCGGGCTGGAGC+TGG - chr2.3:54357798-54357817 MS.gene52434:CDS 60.0%
! ATTCTAGCCGGGCTGGAGCT+GGG - chr2.3:54357799-54357818 MS.gene52434:CDS 60.0%
! GGTGATGGCAGCTGGGTTGT+CGG - chr2.3:54357837-54357856 MS.gene52434:CDS 60.0%
! TTCTAGCCGGGCTGGAGCTG+GGG - chr2.3:54357800-54357819 MS.gene52434:CDS 65.0%
TCAGACCCCCAGCTCCAGCC+CGG + chr2.3:54357809-54357828 None:intergenic 70.0%
! TCTAGCCGGGCTGGAGCTGG+GGG - chr2.3:54357801-54357820 MS.gene52434:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 54357484 54361175 54357484 ID=MS.gene52434
chr2.3 mRNA 54357484 54361175 54357484 ID=MS.gene52434.t1;Parent=MS.gene52434
chr2.3 exon 54361109 54361175 54361109 ID=MS.gene52434.t1.exon1;Parent=MS.gene52434.t1
chr2.3 CDS 54361109 54361175 54361109 ID=cds.MS.gene52434.t1;Parent=MS.gene52434.t1
chr2.3 exon 54360456 54360965 54360456 ID=MS.gene52434.t1.exon2;Parent=MS.gene52434.t1
chr2.3 CDS 54360456 54360965 54360456 ID=cds.MS.gene52434.t1;Parent=MS.gene52434.t1
chr2.3 exon 54358359 54358799 54358359 ID=MS.gene52434.t1.exon3;Parent=MS.gene52434.t1
chr2.3 CDS 54358359 54358799 54358359 ID=cds.MS.gene52434.t1;Parent=MS.gene52434.t1
chr2.3 exon 54357484 54358289 54357484 ID=MS.gene52434.t1.exon4;Parent=MS.gene52434.t1
chr2.3 CDS 54357484 54358289 54357484 ID=cds.MS.gene52434.t1;Parent=MS.gene52434.t1
Gene Sequence

>MS.gene52434

ATGCATTCAAAGTTCAAGAGAAATGCCTCAAAGCTAACACAAGCTAGCTCAGGCCATCTGCTTGCTGGTTTGTTCATAGAAGAAGGAATCAGTTTGTTGTGAAGTATAAGGGTCACCAAGAGTCTAAGTTATGATTTACATAAAGCATGATAAGCAAAAGAGGTTAAGTACACAACTTGGCTCAAATTATTTACTTGTCTCTCTTATCAGTTTGCTTCCCCCGCAACACGCACCAGAATCCTACACGCTTCATTTCTTGGCATCCTTCTAGAGAAAATTGTTTAGTCCTAAATGTTGATGGTAGTTGTAGCGGTAATTCTAGCCGGGCTGGAGCTGGGGGTCTGATTAGACGTGGTGATGGCAGCTGGGTTGTCGGGTTCAGCAGCTACCTAGGACTTTCCAATAACACCTATGCAGAAATCATGGCTATTTACCAAGGGTTGCGTCTGGCAAGGAACTTCGGATGTACCTACATCATTTGTTACTCTGATTCTAAGGGTGTCATTGATATTTTAGCTAAGCCTGTAAACAAATATCATTGTTATGCATCTGTCATTGCCAACATTCTTGATCTCTTGAACTTGGACTGGGAGGTGAAGTTATGTCACTTTCTTAGGGAAGGATATGCTAGTGCGGATTTTCTCGCAAAGTGGGGCTCTAGTAACGACATCAAGTGGAAGTTGTGGAATACCCGTGAAGATTTGAAGGCCATTCTCCTCAGTGATTCTTTGAGGACCCTTGTTCCTCGTGTTTAATTCCTTTGTTGTTGTTGTTGTTTTTCTTTTTCTTCTCTTTTTTCCTGTTTAGTTTTGCCAATGTACCAAAAAATAAAATTTATTTACTTGTCAAAAAATTGAATGGAAAATGGAGGATGTTACGCCACCAATCTCAATGTATTGATTCACTTATCGCATACCAATACCTAATGACCATGGTAATCATGAAGGTGTAAATGAATTAAGCTCATTATAAATTTATAAGGATTGACTTTTCATCTGTTCGGTCAAATTTGTATATTTAATTTAATTTAAAGGTATTGCTAATAGGTGTCTTCAAACTTTGTATAATGATTTTAAATTTTGAAATTATTCATCAAAAACTTAGTATCATTTTTTTTAAAACAAAAAAACTTAGTATCATTTAAAGTCCTTAAACAGTGTTTGAGACTTCTTTTTTTTTTTTTTTTACAAAAATAGACGATATTAATTCAAATTGTTTGAGAACATCGATACAATACAAATTTAAAGTCGCTAAAAACAAAAATGATGAATCTGCGAAAAAACTGGCAACATACATCTTTGGATTCTAGGGTGAGGGATCAATTAAGTCCCTCACCGGTGGACCACGAAAAAATTACGGTTGGATTTAATCAATGGATCAAATTCATTCAGAATGAAATTGAGAGCATCTTTACTTTTTCACACACAATCTCTCCCACCTCTTCTCTTCTTCCTCCTACGTTCCATCAGCCCCAATCTTCATTATTTATTTTTTCTCAATTCTCAGCATCTGATGTTTTAAATAACTTCCAGAATCATAACACACTATAACCATTTACCATTATAAATCTACAATTTCTGAAGCACCCTTATTTTTATAACAATGAAAATAACCAGACTTCATTGAATACAATCACATTCATTGCTTGAGTTATAATTCAATCTTCAAGGGAATAAAGTCCACTTTGGCCAACACCTTTTTAATCTCTAAAACGTACCATAAGTAAATTCATGCAATAAAACATGTTTGGGTTTTCTTGTTTTGCCTCCTTTTAATAATTACATTTTTTTTGGTTAGATTATGCGTGTGCTCAAACTTTTGGTTGAGTTCAGCATTACCATGAAATTCAATCCTGTAATGACTTTGATAACCCTAATTTGTGATTTTCAAAAAGATGAAAATTATAGGAAGAATCATTGTACAATTGAACTATAAGAAATATAATGGAGGATAAATGGTGAAAGATAAGAACAATTTGGACTTGGAGGAGAAGAACGTTGATACAAGAGAAGAGAAAGGAAGGGTCGGTGATGGAACTAACAAAAGGGATATAGAAGAAGAGATGAGATAAAATTGTGTGTGGAAAGATGTAGATGTTCTTAATTTCGTTTCCAACAAATATGATCCATTGATTAAATCCAACTGTAATTTCTTCGTGGTCCACCAGTGAGGGACTTAATTGATCCCTCACCCTAGAATCCACCTTAAATTATGCTTAGAATTGTGCGAAATTATAAAGCCAAAACCTATGGTTTCTCGAATGTTTGGAATATACTTTTATTGAATGTTTCGTTTGATACTCATTTGAATTTGAATTTGGTTTCTTGAATGAATTCAAGTTCAACAATAGGGGTATTTTCTCATAAATCTAACTAGAACACACGGTTGTTCTGGGCACACACCAGCTAGCACCGTTGAAGCGTTTTCCGATGTTGAAACTTTTTCTATTCCGCAAGGCCTTTGCCATATCAACAACCTCAACCGCACTCCAATATTCTCTAAGATTCCTCACCACTACCATCGCTTCAGATTCAAATTCAAATTCATTCGCTGTATCCTACCTCATTCACAAATTCGGTTTCTCACATCAATTCGCACTCAAAGCTTCCAAAAATCTTCGTTTCAAAACCTCACAAAAACCAGATTCAGTTCTCAACTTCTTCAAAAGTCATGGTTTCACTGACTCAGATATACACAGCATCATCAAAAGAGAACCATGGCTTCTTTCATGCAATGCCCACAAAAGGATTCTCCCAAAGTTTCAATTTTTAATCACCAAAGGTGCTTCTACCTCTGACATTCTTCGTATGGTTGTAGGTAACCCTAAATTCGTCAAATCAAGTTTGAAGAATCATGAAACTATGTTTCATTTTTTTCTATCCAAAGGTGCTTCTTCCTCTGATATTGTTGCATTGTTAACTGCTAACCCTACAATTTTGAAATCTAGCTTGGAGAGACGAATAATCCCTCTTTTTGAATTTTTAAGTAGGTTTCTGAAAACCAACAAGGATGCCATTCTTTGTTTAATTCGGCATTCGACTGCATTTTCTATGAATACCTATCACCTTACTGTGGATAATGTCAATTTGATGTCTGAGTTTGGAGTTTCTGATTCTACAATTGCTAGATTGCTTCGAACAAGGCCATCTATATTTGGTTCAAAGGATTTGATTAAGTCATTGGAGGAAGTTAAGGGTTTAGGGTTTCATCCTTCATTGACTACTTTTGGGGTTGCTTTGGTAGCCAAGCAATGTATGAGTAAAAAACTTTGGGATGAGAAAGTTGACACCTTTAACAAATGGGGCTGGTCTGATGAAGCTGTTATTCAAACATTTCAGTTGCAGCCTAATTTGATGTTGGTTTCAATTGATAAGATTGATTCGATAATGAGTTTTTGGGTCAATCAATTGGGTTGGAATTCCTTGGCACTTGCCAAACTACCACAGATGTTTTGTTTTAGTTTGGAGAAAAGGATCATTCCAAGGGCCTCAGTTATGCAATTTCTTTTGATGAAAGGTTTGCGAAAAAAGAATGCCAGCTTAGTTACACCATTTAGATATTCTGAGAAGTTGTTCTTGAACAAGTTTGTTTGCTCCTTTAAGGAGGAATCTGATTATCTATTAAAGCTATACGAGGAAAAAATGAAACTTGCATACACAATGGAAAACAATGGCATGCCATTCACAAATTAG
Protein sequence

>MS.gene52434.t1

MHSKFKRNASKLTQASSGHLLAVCFPRNTHQNPTRFISWHPSRENCLVLNVDGSCSGNSSRAGAGGLIRRGDGSWVVGFSSYLGLSNNTYAEIMAIYQGLRLARNFGCTYIICYSDSKGVIDILAKPVNKYHCYASVIANILDLLNLDWEVKLCHFLREGYASADFLAKWGSSNDIKWKLWNTREDLKAILLKHTVVLGTHQLAPLKRFPMLKLFLFRKAFAISTTSTALQYSLRFLTTTIASDSNSNSFAVSYLIHKFGFSHQFALKASKNLRFKTSQKPDSVLNFFKSHGFTDSDIHSIIKREPWLLSCNAHKRILPKFQFLITKGASTSDILRMVVGASSSDIVALLTANPTILKSSLERRIIPLFEFLSRFLKTNKDAILCLIRHSTAFSMNTYHLTVDNVNLMSEFGVSDSTIARLLRTRPSIFGSKDLIKSLEEVKGLGFHPSLTTFGVALVAKQCMSKKLWDEKVDTFNKWGWSDEAVIQTFQLQPNLMLVSIDKIDSIMSFWVNQLGWNSLALAKLPQMFCFSLEKRIIPRASVMQFLLMKGLRKKNASLVTPFRYSEKLFLNKFVCSFKEESDYLLKLYEEKMKLAYTMENNGMPFTN