Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073608.t1 | XP_013467369.1 | 97.1 | 414 | 12 | 0 | 1 | 414 | 1 | 414 | 8.30E-215 | 756.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073608.t1 | F4IZC4 | 62.8 | 366 | 129 | 3 | 53 | 414 | 74 | 436 | 8.1e-118 | 425.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073608.t1 | A0A072VIJ8 | 97.1 | 414 | 12 | 0 | 1 | 414 | 1 | 414 | 6.0e-215 | 756.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049181 | MS.gene073608 | -0.842904 | 1.95E-58 | -1.69E-46 |
| MS.gene049217 | MS.gene073608 | 0.801239 | 9.89E-49 | -1.69E-46 |
| MS.gene049222 | MS.gene073608 | 0.816001 | 6.93E-52 | -1.69E-46 |
| MS.gene049232 | MS.gene073608 | 0.848418 | 6.21E-60 | -1.69E-46 |
| MS.gene049285 | MS.gene073608 | 0.843103 | 1.72E-58 | -1.69E-46 |
| MS.gene049313 | MS.gene073608 | -0.809279 | 2.05E-50 | -1.69E-46 |
| MS.gene049320 | MS.gene073608 | 0.836228 | 1.06E-56 | -1.69E-46 |
| MS.gene049627 | MS.gene073608 | 0.805142 | 1.54E-49 | -1.69E-46 |
| MS.gene05010 | MS.gene073608 | 0.857399 | 1.68E-62 | -1.69E-46 |
| MS.gene050163 | MS.gene073608 | 0.821752 | 3.42E-53 | -1.69E-46 |
| MS.gene050165 | MS.gene073608 | 0.841099 | 5.83E-58 | -1.69E-46 |
| MS.gene050170 | MS.gene073608 | 0.821954 | 3.07E-53 | -1.69E-46 |
| MS.gene050216 | MS.gene073608 | 0.817697 | 2.88E-52 | -1.69E-46 |
| MS.gene050323 | MS.gene073608 | 0.818415 | 1.98E-52 | -1.69E-46 |
| MS.gene050333 | MS.gene073608 | 0.817945 | 2.53E-52 | -1.69E-46 |
| MS.gene050496 | MS.gene073608 | 0.85864 | 7.17E-63 | -1.69E-46 |
| MS.gene050504 | MS.gene073608 | 0.852762 | 3.73E-61 | -1.69E-46 |
| MS.gene050518 | MS.gene073608 | 0.839293 | 1.73E-57 | -1.69E-46 |
| MS.gene050612 | MS.gene073608 | 0.850824 | 1.32E-60 | -1.69E-46 |
| MS.gene050675 | MS.gene073608 | 0.821539 | 3.83E-53 | -1.69E-46 |
| MS.gene050699 | MS.gene073608 | 0.816849 | 4.47E-52 | -1.69E-46 |
| MS.gene050772 | MS.gene073608 | 0.801413 | 9.11E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene073608 | 0.811346 | 7.33E-51 | -1.69E-46 |
| MS.gene050871 | MS.gene073608 | 0.81203 | 5.20E-51 | -1.69E-46 |
| MS.gene050876 | MS.gene073608 | 0.887572 | 1.27E-72 | -1.69E-46 |
| MS.gene05087 | MS.gene073608 | 0.841378 | 4.93E-58 | -1.69E-46 |
| MS.gene050904 | MS.gene073608 | 0.8179 | 2.59E-52 | -1.69E-46 |
| MS.gene050986 | MS.gene073608 | 0.839784 | 1.29E-57 | -1.69E-46 |
| MS.gene051268 | MS.gene073608 | 0.802792 | 4.74E-49 | -1.69E-46 |
| MS.gene051364 | MS.gene073608 | -0.802395 | 5.72E-49 | -1.69E-46 |
| MS.gene051366 | MS.gene073608 | -0.800649 | 1.31E-48 | -1.69E-46 |
| MS.gene051367 | MS.gene073608 | -0.821327 | 4.28E-53 | -1.69E-46 |
| MS.gene052164 | MS.gene073608 | 0.80394 | 2.74E-49 | -1.69E-46 |
| MS.gene052482 | MS.gene073608 | 0.823234 | 1.55E-53 | -1.69E-46 |
| MS.gene052486 | MS.gene073608 | 0.834153 | 3.53E-56 | -1.69E-46 |
| MS.gene052916 | MS.gene073608 | 0.801654 | 8.13E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene073608 | 0.80124 | 9.88E-49 | -1.69E-46 |
| MS.gene053083 | MS.gene073608 | -0.814388 | 1.58E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene073608 | 0.802177 | 6.35E-49 | -1.69E-46 |
| MS.gene053286 | MS.gene073608 | 0.806382 | 8.45E-50 | -1.69E-46 |
| MS.gene054638 | MS.gene073608 | 0.825772 | 3.91E-54 | -1.69E-46 |
| MS.gene054642 | MS.gene073608 | 0.809831 | 1.56E-50 | -1.69E-46 |
| MS.gene05470 | MS.gene073608 | 0.800756 | 1.24E-48 | -1.69E-46 |
| MS.gene054954 | MS.gene073608 | 0.872693 | 2.61E-67 | -1.69E-46 |
| MS.gene055362 | MS.gene073608 | 0.838822 | 2.29E-57 | -1.69E-46 |
| MS.gene055502 | MS.gene073608 | 0.812079 | 5.08E-51 | -1.69E-46 |
| MS.gene055577 | MS.gene073608 | 0.806052 | 9.92E-50 | -1.69E-46 |
| MS.gene055634 | MS.gene073608 | 0.848507 | 5.86E-60 | -1.69E-46 |
| MS.gene055750 | MS.gene073608 | 0.820844 | 5.53E-53 | -1.69E-46 |
| MS.gene055751 | MS.gene073608 | 0.818122 | 2.31E-52 | -1.69E-46 |
| MS.gene055776 | MS.gene073608 | 0.861927 | 7.27E-64 | -1.69E-46 |
| MS.gene055849 | MS.gene073608 | 0.840671 | 7.56E-58 | -1.69E-46 |
| MS.gene05589 | MS.gene073608 | 0.838758 | 2.38E-57 | -1.69E-46 |
| MS.gene056046 | MS.gene073608 | 0.844404 | 7.72E-59 | -1.69E-46 |
| MS.gene056409 | MS.gene073608 | 0.805882 | 1.08E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene073608 | 0.87047 | 1.42E-66 | -1.69E-46 |
| MS.gene056510 | MS.gene073608 | 0.828322 | 9.59E-55 | -1.69E-46 |
| MS.gene056530 | MS.gene073608 | -0.808066 | 3.72E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene073608 | 0.846373 | 2.26E-59 | -1.69E-46 |
| MS.gene057148 | MS.gene073608 | 0.80722 | 5.62E-50 | -1.69E-46 |
| MS.gene057684 | MS.gene073608 | 0.830014 | 3.73E-55 | -1.69E-46 |
| MS.gene057687 | MS.gene073608 | 0.828832 | 7.22E-55 | -1.69E-46 |
| MS.gene057831 | MS.gene073608 | 0.800982 | 1.12E-48 | -1.69E-46 |
| MS.gene057872 | MS.gene073608 | 0.822141 | 2.78E-53 | -1.69E-46 |
| MS.gene058335 | MS.gene073608 | 0.800301 | 1.54E-48 | -1.69E-46 |
| MS.gene058419 | MS.gene073608 | 0.815835 | 7.54E-52 | -1.69E-46 |
| MS.gene058719 | MS.gene073608 | 0.811448 | 6.97E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene073608 | 0.832703 | 8.13E-56 | -1.69E-46 |
| MS.gene05884 | MS.gene073608 | -0.809149 | 2.18E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene073608 | 0.862254 | 5.77E-64 | -1.69E-46 |
| MS.gene059023 | MS.gene073608 | 0.80028 | 1.55E-48 | -1.69E-46 |
| MS.gene059052 | MS.gene073608 | -0.80193 | 7.14E-49 | -1.69E-46 |
| MS.gene05912 | MS.gene073608 | 0.800808 | 1.21E-48 | -1.69E-46 |
| MS.gene059514 | MS.gene073608 | -0.813916 | 2.01E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene073608 | 0.840442 | 8.67E-58 | -1.69E-46 |
| MS.gene059718 | MS.gene073608 | 0.810108 | 1.36E-50 | -1.69E-46 |
| MS.gene059837 | MS.gene073608 | 0.843282 | 1.54E-58 | -1.69E-46 |
| MS.gene059865 | MS.gene073608 | 0.852347 | 4.90E-61 | -1.69E-46 |
| MS.gene060526 | MS.gene073608 | 0.836961 | 6.89E-57 | -1.69E-46 |
| MS.gene060595 | MS.gene073608 | -0.845391 | 4.18E-59 | -1.69E-46 |
| MS.gene060703 | MS.gene073608 | 0.903034 | 5.26E-79 | -1.69E-46 |
| MS.gene060762 | MS.gene073608 | 0.826333 | 2.87E-54 | -1.69E-46 |
| MS.gene060778 | MS.gene073608 | 0.848464 | 6.03E-60 | -1.69E-46 |
| MS.gene06077 | MS.gene073608 | 0.855855 | 4.77E-62 | -1.69E-46 |
| MS.gene060982 | MS.gene073608 | 0.848209 | 7.09E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073608.t1 | MTR_1g050462 | 97.101 | 414 | 12 | 0 | 1 | 414 | 1 | 414 | 0.0 | 791 |
| MS.gene073608.t1 | MTR_1g050462 | 95.511 | 401 | 18 | 0 | 1 | 401 | 1 | 401 | 0.0 | 729 |
| MS.gene073608.t1 | MTR_1g050462 | 96.530 | 317 | 11 | 0 | 1 | 317 | 1 | 317 | 0.0 | 603 |
| MS.gene073608.t1 | MTR_1g050462 | 93.633 | 267 | 17 | 0 | 1 | 267 | 1 | 267 | 2.22e-176 | 493 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073608.t1 | AT3G56160 | 63.388 | 366 | 129 | 3 | 51 | 414 | 47 | 409 | 6.05e-149 | 429 |
| MS.gene073608.t1 | AT3G56160 | 63.115 | 366 | 128 | 4 | 53 | 414 | 74 | 436 | 6.69e-146 | 422 |
| MS.gene073608.t1 | AT3G56160 | 62.541 | 307 | 112 | 1 | 51 | 357 | 47 | 350 | 7.75e-121 | 355 |
| MS.gene073608.t1 | AT3G56160 | 64.259 | 263 | 92 | 1 | 53 | 313 | 74 | 336 | 3.53e-103 | 310 |
| MS.gene073608.t1 | AT3G56160 | 60.000 | 215 | 86 | 0 | 51 | 265 | 47 | 261 | 2.08e-74 | 235 |
Find 112 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATGGCCTGTTGGGCTCTT+TGG | 0.124690 | 1.1:-34608534 | MS.gene073608:CDS |
| AAATATCATGTATCCAAAAT+TGG | 0.149667 | 1.1:-34608733 | MS.gene073608:CDS |
| AATTCCAAACGGCCCAATTT+TGG | 0.174825 | 1.1:+34608720 | None:intergenic |
| CAATTACCTTTCCCAAAATA+AGG | 0.180711 | 1.1:+34604258 | None:intergenic |
| ACTTCTTCATGTGACCTTAT+TGG | 0.188930 | 1.1:-34600125 | MS.gene073608:CDS |
| CATGGCCTGTTGGGCTCTTT+GGG | 0.246922 | 1.1:-34608533 | MS.gene073608:CDS |
| TGTGGTGCATTTGGAGAATC+TGG | 0.261628 | 1.1:-34599797 | MS.gene073608:CDS |
| ATTTGGAGAATCTGGGTTAC+TGG | 0.268679 | 1.1:-34599789 | MS.gene073608:CDS |
| GCCCCTAGCAAAGCTCAAAA+TGG | 0.283477 | 1.1:+34609272 | None:intergenic |
| ACTTTGATTCTGCAGCTTGC+TGG | 0.286403 | 1.1:-34606158 | MS.gene073608:intron |
| GTGGCGTGAGGATGAGTAAA+TGG | 0.299448 | 1.1:+34609484 | None:intergenic |
| CAACCCCAAGAATTTATTAC+AGG | 0.300555 | 1.1:-34606762 | MS.gene073608:intron |
| CGGGAAGAAGGGGAAAATAG+AGG | 0.303301 | 1.1:+34609435 | None:intergenic |
| CTAAACCTGTAATAAATTCT+TGG | 0.309750 | 1.1:+34606757 | None:intergenic |
| TCTATAACCGCAACCATTAC+TGG | 0.309807 | 1.1:+34599827 | None:intergenic |
| AATTACCTTTCCCAAAATAA+GGG | 0.315621 | 1.1:+34604259 | None:intergenic |
| CTGTAGAAGCATGGCCTGTT+GGG | 0.328247 | 1.1:-34608542 | MS.gene073608:CDS |
| GAGCCACTTTGTGGTGCATT+TGG | 0.332991 | 1.1:-34599806 | MS.gene073608:CDS |
| TAAACCTGTAATAAATTCTT+GGG | 0.340341 | 1.1:+34606758 | None:intergenic |
| ATGGCGAGGGCGGGAAGAAG+GGG | 0.347970 | 1.1:+34609425 | None:intergenic |
| GTATCCAAAATTGGGCCGTT+TGG | 0.365828 | 1.1:-34608724 | MS.gene073608:CDS |
| GCGTAGAGTGAGGGATTTAA+TGG | 0.367506 | 1.1:+34609392 | None:intergenic |
| CTGATTTCTGCGGTGACGTT+AGG | 0.368875 | 1.1:-34608790 | MS.gene073608:CDS |
| GAAAATAGAGGGGTTGGACG+AGG | 0.389124 | 1.1:+34609447 | None:intergenic |
| GCTGTAGAAGCATGGCCTGT+TGG | 0.391111 | 1.1:-34608543 | MS.gene073608:CDS |
| AATATTACCCTGGAAAAGTA+TGG | 0.392592 | 1.1:+34606798 | None:intergenic |
| TTAAGCCACCTTGACATTAC+CGG | 0.393563 | 1.1:+34599618 | None:intergenic |
| AGTTGGCATACAGCAAAATA+TGG | 0.395674 | 1.1:+34606339 | None:intergenic |
| ACAGTAATATCTAACTTGTT+AGG | 0.396771 | 1.1:-34606107 | MS.gene073608:CDS |
| GGATGGCGAGGGCGGGAAGA+AGG | 0.414231 | 1.1:+34609423 | None:intergenic |
| AATATCATGTATCCAAAATT+GGG | 0.421936 | 1.1:-34608732 | MS.gene073608:CDS |
| GTCTGAAGGGAGTGGGGCGG+TGG | 0.425306 | 1.1:+34609370 | None:intergenic |
| CGGAGTCTTTCAATTATCTC+TGG | 0.427541 | 1.1:-34600082 | MS.gene073608:CDS |
| TCAGAAAACATTACCAGTAA+TGG | 0.428375 | 1.1:-34599840 | MS.gene073608:intron |
| ACCACTACCATCCAACTGAT+TGG | 0.435166 | 1.1:+34609335 | None:intergenic |
| GATGGCGAGGGCGGGAAGAA+GGG | 0.436446 | 1.1:+34609424 | None:intergenic |
| ACTAGCCCAAAGAGCCCAAC+AGG | 0.444040 | 1.1:+34608528 | None:intergenic |
| AACGCTATTGAATACCAATA+AGG | 0.446187 | 1.1:+34600111 | None:intergenic |
| ATCACAAAATTTGTAGCTAG+TGG | 0.459990 | 1.1:-34604344 | MS.gene073608:CDS |
| CAGTTGGATGGTAGTGGTAG+TGG | 0.470738 | 1.1:-34609330 | MS.gene073608:CDS |
| GGATTAACATGTCCTAGTCT+TGG | 0.479373 | 1.1:-34608769 | MS.gene073608:CDS |
| CTGTAATAAATTCTTGGGGT+TGG | 0.480588 | 1.1:+34606763 | None:intergenic |
| GGAGTGAGGATGGCGAGGGC+GGG | 0.485143 | 1.1:+34609416 | None:intergenic |
| GGGAAGAAGGGGAAAATAGA+GGG | 0.485919 | 1.1:+34609436 | None:intergenic |
| AAATTTGTAGCTAGTGGAGT+TGG | 0.486943 | 1.1:-34604338 | MS.gene073608:CDS |
| AGGGGTTGGACGAGGGAATG+AGG | 0.487237 | 1.1:+34609455 | None:intergenic |
| AGCAAATTCCTACCAGGCTA+AGG | 0.489921 | 1.1:+34601352 | None:intergenic |
| TTTCTTGTAGCTATTGGACT+GGG | 0.493824 | 1.1:-34601036 | MS.gene073608:CDS |
| GAAGGGGAAAATAGAGGGGT+TGG | 0.496201 | 1.1:+34609441 | None:intergenic |
| AAGAGTCAAAAGGATTGAGC+TGG | 0.500220 | 1.1:-34609302 | MS.gene073608:CDS |
| ATATCATCCTGCAGGTACCT+TGG | 0.501746 | 1.1:-34601110 | MS.gene073608:intron |
| CCCCTAGCAAAGCTCAAAAT+GGG | 0.502048 | 1.1:+34609273 | None:intergenic |
| TGGGGCGGTGGCGTAGAGTG+AGG | 0.502175 | 1.1:+34609382 | None:intergenic |
| CGGAGTGAGGATGGCGAGGG+CGG | 0.505348 | 1.1:+34609415 | None:intergenic |
| CACTCGACGGAGGTCATGGC+GGG | 0.511861 | 1.1:-34609516 | None:intergenic |
| AAAATAGAGGGGTTGGACGA+GGG | 0.518366 | 1.1:+34609448 | None:intergenic |
| ACACCACTTGATAATGTAGT+TGG | 0.522256 | 1.1:+34606322 | None:intergenic |
| TATTCAATAGCGTTGCTGTC+CGG | 0.524867 | 1.1:-34600102 | MS.gene073608:CDS |
| AGTGGAAGCAAAGAGTCAAA+AGG | 0.527701 | 1.1:-34609312 | MS.gene073608:CDS |
| AACATTACCAGTAATGGTTG+CGG | 0.539630 | 1.1:-34599834 | MS.gene073608:CDS |
| GACTTGCTCACTTGTATCCA+AGG | 0.541072 | 1.1:+34601093 | None:intergenic |
| GTGGTGCATTTGGAGAATCT+GGG | 0.542143 | 1.1:-34599796 | MS.gene073608:CDS |
| GGGGCGGTGGCGTAGAGTGA+GGG | 0.542160 | 1.1:+34609383 | None:intergenic |
| ACTCATACTAGTTGCAAGCC+AGG | 0.542506 | 1.1:-34600017 | MS.gene073608:intron |
| TCCAATCAGTTGGATGGTAG+TGG | 0.545642 | 1.1:-34609336 | MS.gene073608:CDS |
| TGCTGGAGCAAATACTGCAC+TGG | 0.546176 | 1.1:-34606141 | MS.gene073608:CDS |
| GGATTGAGCACATGGTCTGA+AGG | 0.546750 | 1.1:+34609356 | None:intergenic |
| GCACATGGTCTGAAGGGAGT+GGG | 0.546886 | 1.1:+34609363 | None:intergenic |
| GTGTTGCGAAGTGAAGAAAT+TGG | 0.548520 | 1.1:-34608570 | MS.gene073608:CDS |
| GGAAGAAGGGGAAAATAGAG+GGG | 0.548611 | 1.1:+34609437 | None:intergenic |
| ATTTAATGGCGGAGTGAGGA+TGG | 0.549666 | 1.1:+34609406 | None:intergenic |
| GGCTTCACTATTAACAGAAG+TGG | 0.550907 | 1.1:+34601066 | None:intergenic |
| GCGGTTATAGAGCCACTTTG+TGG | 0.557289 | 1.1:-34599815 | MS.gene073608:CDS |
| AGCACATGGTCTGAAGGGAG+TGG | 0.558159 | 1.1:+34609362 | None:intergenic |
| CTGAATTTGTAATATTACCC+TGG | 0.558885 | 1.1:+34606788 | None:intergenic |
| CACATGGTCTGAAGGGAGTG+GGG | 0.559219 | 1.1:+34609364 | None:intergenic |
| ATTAGATGTGTTGCAATACA+AGG | 0.561844 | 1.1:+34599761 | None:intergenic |
| GAACACCTTGTAGATTATTG+TGG | 0.563250 | 1.1:-34599680 | MS.gene073608:intron |
| ATTACCTTTCCCAAAATAAG+GGG | 0.563723 | 1.1:+34604260 | None:intergenic |
| AACTGATTGGATTGAGCACA+TGG | 0.564053 | 1.1:+34609348 | None:intergenic |
| TATTGCAACACATCTAATCC+AGG | 0.567214 | 1.1:-34599756 | MS.gene073608:intron |
| AGGGATTTAATGGCGGAGTG+AGG | 0.569386 | 1.1:+34609402 | None:intergenic |
| AGTCTTTCAATTATCTCTGG+TGG | 0.578014 | 1.1:-34600079 | MS.gene073608:CDS |
| TGATCCCTGAGAAAAGCTTA+CGG | 0.582266 | 1.1:+34601385 | None:intergenic |
| GATTGAGCACATGGTCTGAA+GGG | 0.582552 | 1.1:+34609357 | None:intergenic |
| AGGGGCAATATCTTACCTCT+AGG | 0.584110 | 1.1:-34609255 | MS.gene073608:intron |
| ATGGCGGAGTGAGGATGGCG+AGG | 0.585893 | 1.1:+34609411 | None:intergenic |
| ATGTGCTCAATCCAATCAGT+TGG | 0.587326 | 1.1:-34609346 | MS.gene073608:CDS |
| TCAACAGCGCAACCAAGACT+AGG | 0.588891 | 1.1:+34608757 | None:intergenic |
| ATGGTCTGAAGGGAGTGGGG+CGG | 0.591354 | 1.1:+34609367 | None:intergenic |
| ATGCGTCGCAAAGACAATAC+CGG | 0.593015 | 1.1:-34599637 | MS.gene073608:CDS |
| TGGCGTGAGGATGAGTAAAT+GGG | 0.597198 | 1.1:+34609485 | None:intergenic |
| TGGCGGAGTGAGGATGGCGA+GGG | 0.599047 | 1.1:+34609412 | None:intergenic |
| GAGGATGAGTAAATGGGCGG+TGG | 0.603068 | 1.1:+34609491 | None:intergenic |
| CAGAGATAATTGAAAGACTC+CGG | 0.603417 | 1.1:+34600083 | None:intergenic |
| AAGTGGTGTTGCACTTACCC+AGG | 0.603604 | 1.1:-34606308 | MS.gene073608:intron |
| TGCAACTAGTATGAGTGCGT+TGG | 0.605826 | 1.1:+34600024 | None:intergenic |
| AGACAATACCGGTAATGTCA+AGG | 0.607934 | 1.1:-34599626 | MS.gene073608:CDS |
| AAACCTGTAATAAATTCTTG+GGG | 0.616241 | 1.1:+34606759 | None:intergenic |
| TCTCCAAATGCACCACAAAG+TGG | 0.621477 | 1.1:+34599803 | None:intergenic |
| GGATACAAGTGAGCAAGTCA+AGG | 0.622980 | 1.1:-34601089 | MS.gene073608:CDS |
| TTACCTTTCCCAAAATAAGG+GGG | 0.625879 | 1.1:+34604261 | None:intergenic |
| ATTTGTAGCTCTGATTTCTG+CGG | 0.627818 | 1.1:-34608800 | MS.gene073608:intron |
| GCTCAATCCAATCAGTTGGA+TGG | 0.629293 | 1.1:-34609342 | MS.gene073608:CDS |
| TTGGTGCAGCTGTAGAAGCA+TGG | 0.632248 | 1.1:-34608551 | MS.gene073608:CDS |
| AGAGTCAAAAGGATTGAGCT+GGG | 0.634429 | 1.1:-34609301 | MS.gene073608:CDS |
| ATGCCAACTACATTATCAAG+TGG | 0.643732 | 1.1:-34606325 | MS.gene073608:CDS |
| ATGAGGATGAATGTGGCGTG+AGG | 0.678200 | 1.1:+34609472 | None:intergenic |
| TAGAGTGAGGGATTTAATGG+CGG | 0.692309 | 1.1:+34609395 | None:intergenic |
| CGTGAGGATGAGTAAATGGG+CGG | 0.692761 | 1.1:+34609488 | None:intergenic |
| CGAGGGAATGAGGATGAATG+TGG | 0.697030 | 1.1:+34609465 | None:intergenic |
| CAATACCGGTAATGTCAAGG+TGG | 0.719218 | 1.1:-34599623 | MS.gene073608:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 34599618 | 34609523 | 34599618 | ID=MS.gene073608 |
| chr1.1 | mRNA | 34599618 | 34609523 | 34599618 | ID=MS.gene073608.t1;Parent=MS.gene073608 |
| chr1.1 | exon | 34609256 | 34609523 | 34609256 | ID=MS.gene073608.t1.exon1;Parent=MS.gene073608.t1 |
| chr1.1 | CDS | 34609256 | 34609523 | 34609256 | ID=cds.MS.gene073608.t1;Parent=MS.gene073608.t1 |
| chr1.1 | exon | 34608707 | 34608814 | 34608707 | ID=MS.gene073608.t1.exon2;Parent=MS.gene073608.t1 |
| chr1.1 | CDS | 34608707 | 34608814 | 34608707 | ID=cds.MS.gene073608.t1;Parent=MS.gene073608.t1 |
| chr1.1 | exon | 34608530 | 34608597 | 34608530 | ID=MS.gene073608.t1.exon3;Parent=MS.gene073608.t1 |
| chr1.1 | CDS | 34608530 | 34608597 | 34608530 | ID=cds.MS.gene073608.t1;Parent=MS.gene073608.t1 |
| chr1.1 | exon | 34606763 | 34606841 | 34606763 | ID=MS.gene073608.t1.exon4;Parent=MS.gene073608.t1 |
| chr1.1 | CDS | 34606763 | 34606841 | 34606763 | ID=cds.MS.gene073608.t1;Parent=MS.gene073608.t1 |
| chr1.1 | exon | 34606309 | 34606367 | 34606309 | ID=MS.gene073608.t1.exon5;Parent=MS.gene073608.t1 |
| chr1.1 | CDS | 34606309 | 34606367 | 34606309 | ID=cds.MS.gene073608.t1;Parent=MS.gene073608.t1 |
| chr1.1 | exon | 34606097 | 34606165 | 34606097 | ID=MS.gene073608.t1.exon6;Parent=MS.gene073608.t1 |
| chr1.1 | CDS | 34606097 | 34606165 | 34606097 | ID=cds.MS.gene073608.t1;Parent=MS.gene073608.t1 |
| chr1.1 | exon | 34604265 | 34604378 | 34604265 | ID=MS.gene073608.t1.exon7;Parent=MS.gene073608.t1 |
| chr1.1 | CDS | 34604265 | 34604378 | 34604265 | ID=cds.MS.gene073608.t1;Parent=MS.gene073608.t1 |
| chr1.1 | exon | 34603274 | 34603295 | 34603274 | ID=MS.gene073608.t1.exon8;Parent=MS.gene073608.t1 |
| chr1.1 | CDS | 34603274 | 34603295 | 34603274 | ID=cds.MS.gene073608.t1;Parent=MS.gene073608.t1 |
| chr1.1 | exon | 34601365 | 34601432 | 34601365 | ID=MS.gene073608.t1.exon9;Parent=MS.gene073608.t1 |
| chr1.1 | CDS | 34601365 | 34601432 | 34601365 | ID=cds.MS.gene073608.t1;Parent=MS.gene073608.t1 |
| chr1.1 | exon | 34601033 | 34601118 | 34601033 | ID=MS.gene073608.t1.exon10;Parent=MS.gene073608.t1 |
| chr1.1 | CDS | 34601033 | 34601118 | 34601033 | ID=cds.MS.gene073608.t1;Parent=MS.gene073608.t1 |
| chr1.1 | exon | 34600018 | 34600147 | 34600018 | ID=MS.gene073608.t1.exon11;Parent=MS.gene073608.t1 |
| chr1.1 | CDS | 34600018 | 34600147 | 34600018 | ID=cds.MS.gene073608.t1;Parent=MS.gene073608.t1 |
| chr1.1 | exon | 34599757 | 34599858 | 34599757 | ID=MS.gene073608.t1.exon12;Parent=MS.gene073608.t1 |
| chr1.1 | CDS | 34599757 | 34599858 | 34599757 | ID=cds.MS.gene073608.t1;Parent=MS.gene073608.t1 |
| chr1.1 | exon | 34599618 | 34599689 | 34599618 | ID=MS.gene073608.t1.exon13;Parent=MS.gene073608.t1 |
| chr1.1 | CDS | 34599618 | 34599689 | 34599618 | ID=cds.MS.gene073608.t1;Parent=MS.gene073608.t1 |
| Gene Sequence |
| Protein sequence |
