Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24474.t1 | XP_013470428.1 | 93.6 | 597 | 37 | 1 | 1 | 597 | 5 | 600 | 0.00E+00 | 1114.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24474.t1 | Q9M2T9 | 73.5 | 603 | 142 | 4 | 1 | 587 | 5 | 605 | 2.4e-256 | 885.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24474.t1 | A0A072VS17 | 93.6 | 597 | 37 | 1 | 1 | 597 | 5 | 600 | 0.0e+00 | 1114.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049137 | MS.gene24474 | 0.812469 | 4.17E-51 | -1.69E-46 |
MS.gene049171 | MS.gene24474 | 0.859727 | 3.39E-63 | -1.69E-46 |
MS.gene049217 | MS.gene24474 | 0.871216 | 8.09E-67 | -1.69E-46 |
MS.gene049222 | MS.gene24474 | 0.896565 | 3.27E-76 | -1.69E-46 |
MS.gene049232 | MS.gene24474 | 0.854273 | 1.37E-61 | -1.69E-46 |
MS.gene049281 | MS.gene24474 | -0.802018 | 6.84E-49 | -1.69E-46 |
MS.gene049285 | MS.gene24474 | 0.881847 | 1.71E-70 | -1.69E-46 |
MS.gene049320 | MS.gene24474 | 0.864331 | 1.31E-64 | -1.69E-46 |
MS.gene049609 | MS.gene24474 | 0.825673 | 4.12E-54 | -1.69E-46 |
MS.gene049611 | MS.gene24474 | -0.802963 | 4.37E-49 | -1.69E-46 |
MS.gene049615 | MS.gene24474 | 0.801879 | 7.31E-49 | -1.69E-46 |
MS.gene049627 | MS.gene24474 | 0.938905 | 3.10E-99 | -1.69E-46 |
MS.gene049633 | MS.gene24474 | 0.814163 | 1.77E-51 | -1.69E-46 |
MS.gene049865 | MS.gene24474 | 0.812333 | 4.47E-51 | -1.69E-46 |
MS.gene05010 | MS.gene24474 | 0.854678 | 1.05E-61 | -1.69E-46 |
MS.gene050163 | MS.gene24474 | 0.876194 | 1.69E-68 | -1.69E-46 |
MS.gene050165 | MS.gene24474 | 0.870505 | 1.39E-66 | -1.69E-46 |
MS.gene050170 | MS.gene24474 | 0.83223 | 1.06E-55 | -1.69E-46 |
MS.gene050216 | MS.gene24474 | 0.806285 | 8.86E-50 | -1.69E-46 |
MS.gene050323 | MS.gene24474 | 0.810179 | 1.31E-50 | -1.69E-46 |
MS.gene050333 | MS.gene24474 | 0.86726 | 1.56E-65 | -1.69E-46 |
MS.gene050353 | MS.gene24474 | -0.827607 | 1.43E-54 | -1.69E-46 |
MS.gene050354 | MS.gene24474 | -0.810865 | 9.32E-51 | -1.69E-46 |
MS.gene050381 | MS.gene24474 | -0.82263 | 2.14E-53 | -1.69E-46 |
MS.gene050496 | MS.gene24474 | 0.814216 | 1.72E-51 | -1.69E-46 |
MS.gene050504 | MS.gene24474 | 0.893186 | 7.95E-75 | -1.69E-46 |
MS.gene050518 | MS.gene24474 | 0.868494 | 6.26E-66 | -1.69E-46 |
MS.gene050538 | MS.gene24474 | 0.801417 | 9.09E-49 | -1.69E-46 |
MS.gene050577 | MS.gene24474 | 0.86334 | 2.67E-64 | -1.69E-46 |
MS.gene050612 | MS.gene24474 | 0.850873 | 1.28E-60 | -1.69E-46 |
MS.gene050675 | MS.gene24474 | 0.840237 | 9.81E-58 | -1.69E-46 |
MS.gene050699 | MS.gene24474 | 0.858214 | 9.61E-63 | -1.69E-46 |
MS.gene050747 | MS.gene24474 | 0.866008 | 3.90E-65 | -1.69E-46 |
MS.gene050772 | MS.gene24474 | 0.848857 | 4.69E-60 | -1.69E-46 |
MS.gene050868 | MS.gene24474 | 0.849723 | 2.69E-60 | -1.69E-46 |
MS.gene050871 | MS.gene24474 | 0.847359 | 1.22E-59 | -1.69E-46 |
MS.gene050876 | MS.gene24474 | 0.846694 | 1.85E-59 | -1.69E-46 |
MS.gene05087 | MS.gene24474 | 0.886587 | 3.00E-72 | -1.69E-46 |
MS.gene050883 | MS.gene24474 | -0.827339 | 1.65E-54 | -1.69E-46 |
MS.gene050904 | MS.gene24474 | 0.862397 | 5.22E-64 | -1.69E-46 |
MS.gene050950 | MS.gene24474 | 0.859421 | 4.19E-63 | -1.69E-46 |
MS.gene050986 | MS.gene24474 | 0.84967 | 2.79E-60 | -1.69E-46 |
MS.gene05100 | MS.gene24474 | 0.846126 | 2.64E-59 | -1.69E-46 |
MS.gene051127 | MS.gene24474 | -0.803128 | 4.04E-49 | -1.69E-46 |
MS.gene051317 | MS.gene24474 | 0.823126 | 1.64E-53 | -1.69E-46 |
MS.gene051364 | MS.gene24474 | -0.842986 | 1.85E-58 | -1.69E-46 |
MS.gene051366 | MS.gene24474 | -0.828206 | 1.02E-54 | -1.69E-46 |
MS.gene051367 | MS.gene24474 | -0.829461 | 5.08E-55 | -1.69E-46 |
MS.gene05141 | MS.gene24474 | -0.830391 | 3.02E-55 | -1.69E-46 |
MS.gene051551 | MS.gene24474 | 0.830035 | 3.68E-55 | -1.69E-46 |
MS.gene051564 | MS.gene24474 | 0.839205 | 1.82E-57 | -1.69E-46 |
MS.gene051566 | MS.gene24474 | 0.820554 | 6.45E-53 | -1.69E-46 |
MS.gene051694 | MS.gene24474 | 0.939076 | 2.33E-99 | -1.69E-46 |
MS.gene051858 | MS.gene24474 | 0.864283 | 1.36E-64 | -1.69E-46 |
MS.gene051946 | MS.gene24474 | -0.827028 | 1.96E-54 | -1.69E-46 |
MS.gene052164 | MS.gene24474 | 0.851246 | 1.01E-60 | -1.69E-46 |
MS.gene05234 | MS.gene24474 | -0.830498 | 2.84E-55 | -1.69E-46 |
MS.gene052379 | MS.gene24474 | 0.803588 | 3.25E-49 | -1.69E-46 |
MS.gene052482 | MS.gene24474 | 0.874963 | 4.48E-68 | -1.69E-46 |
MS.gene052486 | MS.gene24474 | 0.886646 | 2.85E-72 | -1.69E-46 |
MS.gene052503 | MS.gene24474 | 0.830154 | 3.45E-55 | -1.69E-46 |
MS.gene052605 | MS.gene24474 | 0.823774 | 1.16E-53 | -1.69E-46 |
MS.gene052615 | MS.gene24474 | 0.810451 | 1.14E-50 | -1.69E-46 |
MS.gene052670 | MS.gene24474 | 0.837692 | 4.48E-57 | -1.69E-46 |
MS.gene052823 | MS.gene24474 | 0.834135 | 3.57E-56 | -1.69E-46 |
MS.gene052825 | MS.gene24474 | 0.834445 | 2.99E-56 | -1.69E-46 |
MS.gene052966 | MS.gene24474 | 0.850174 | 2.01E-60 | -1.69E-46 |
MS.gene053203 | MS.gene24474 | 0.87361 | 1.29E-67 | -1.69E-46 |
MS.gene053207 | MS.gene24474 | 0.820862 | 5.48E-53 | -1.69E-46 |
MS.gene053213 | MS.gene24474 | 0.874157 | 8.41E-68 | -1.69E-46 |
MS.gene053286 | MS.gene24474 | 0.872545 | 2.93E-67 | -1.69E-46 |
MS.gene053420 | MS.gene24474 | -0.833396 | 5.46E-56 | -1.69E-46 |
MS.gene053421 | MS.gene24474 | -0.843925 | 1.04E-58 | -1.69E-46 |
MS.gene053431 | MS.gene24474 | -0.813875 | 2.05E-51 | -1.69E-46 |
MS.gene053436 | MS.gene24474 | 0.838468 | 2.82E-57 | -1.69E-46 |
MS.gene053479 | MS.gene24474 | 0.803375 | 3.59E-49 | -1.69E-46 |
MS.gene053480 | MS.gene24474 | 0.806329 | 8.67E-50 | -1.69E-46 |
MS.gene053549 | MS.gene24474 | -0.838564 | 2.67E-57 | -1.69E-46 |
MS.gene053574 | MS.gene24474 | 0.845454 | 4.02E-59 | -1.69E-46 |
MS.gene053626 | MS.gene24474 | 0.810289 | 1.24E-50 | -1.69E-46 |
MS.gene053632 | MS.gene24474 | 0.819005 | 1.46E-52 | -1.69E-46 |
MS.gene053824 | MS.gene24474 | 0.832609 | 8.58E-56 | -1.69E-46 |
MS.gene054003 | MS.gene24474 | 0.803139 | 4.02E-49 | -1.69E-46 |
MS.gene054408 | MS.gene24474 | 0.836593 | 8.54E-57 | -1.69E-46 |
MS.gene054595 | MS.gene24474 | 0.846303 | 2.36E-59 | -1.69E-46 |
MS.gene054600 | MS.gene24474 | 0.843698 | 1.19E-58 | -1.69E-46 |
MS.gene054616 | MS.gene24474 | -0.819547 | 1.10E-52 | -1.69E-46 |
MS.gene054638 | MS.gene24474 | 0.831786 | 1.37E-55 | -1.69E-46 |
MS.gene054642 | MS.gene24474 | 0.856172 | 3.85E-62 | -1.69E-46 |
MS.gene054707 | MS.gene24474 | -0.802945 | 4.41E-49 | -1.69E-46 |
MS.gene054708 | MS.gene24474 | -0.803064 | 4.17E-49 | -1.69E-46 |
MS.gene05470 | MS.gene24474 | 0.853176 | 2.84E-61 | -1.69E-46 |
MS.gene054927 | MS.gene24474 | 0.827765 | 1.31E-54 | -1.69E-46 |
MS.gene054954 | MS.gene24474 | 0.868412 | 6.66E-66 | -1.69E-46 |
MS.gene055154 | MS.gene24474 | -0.821781 | 3.36E-53 | -1.69E-46 |
MS.gene055202 | MS.gene24474 | -0.809246 | 2.08E-50 | -1.69E-46 |
MS.gene055206 | MS.gene24474 | 0.800361 | 1.49E-48 | -1.69E-46 |
MS.gene055362 | MS.gene24474 | 0.884097 | 2.56E-71 | -1.69E-46 |
MS.gene055502 | MS.gene24474 | 0.882244 | 1.23E-70 | -1.69E-46 |
MS.gene055577 | MS.gene24474 | 0.881651 | 2.01E-70 | -1.69E-46 |
MS.gene055634 | MS.gene24474 | 0.813759 | 2.18E-51 | -1.69E-46 |
MS.gene055638 | MS.gene24474 | 0.812207 | 4.76E-51 | -1.69E-46 |
MS.gene055722 | MS.gene24474 | 0.817616 | 3.01E-52 | -1.69E-46 |
MS.gene055748 | MS.gene24474 | 0.816136 | 6.46E-52 | -1.69E-46 |
MS.gene055750 | MS.gene24474 | 0.819582 | 1.08E-52 | -1.69E-46 |
MS.gene055751 | MS.gene24474 | 0.816754 | 4.70E-52 | -1.69E-46 |
MS.gene05589 | MS.gene24474 | 0.832437 | 9.46E-56 | -1.69E-46 |
MS.gene055941 | MS.gene24474 | 0.845127 | 4.93E-59 | -1.69E-46 |
MS.gene056040 | MS.gene24474 | 0.805326 | 1.41E-49 | -1.69E-46 |
MS.gene056083 | MS.gene24474 | 0.837427 | 5.23E-57 | -1.69E-46 |
MS.gene056311 | MS.gene24474 | -0.839778 | 1.29E-57 | -1.69E-46 |
MS.gene056374 | MS.gene24474 | 0.835312 | 1.81E-56 | -1.69E-46 |
MS.gene056409 | MS.gene24474 | 0.862681 | 4.26E-64 | -1.69E-46 |
MS.gene056450 | MS.gene24474 | 0.834312 | 3.22E-56 | -1.69E-46 |
MS.gene056504 | MS.gene24474 | 0.864185 | 1.46E-64 | -1.69E-46 |
MS.gene056510 | MS.gene24474 | 0.856524 | 3.04E-62 | -1.69E-46 |
MS.gene056549 | MS.gene24474 | 0.851266 | 9.93E-61 | -1.69E-46 |
MS.gene056550 | MS.gene24474 | -0.86556 | 5.41E-65 | -1.69E-46 |
MS.gene056610 | MS.gene24474 | 0.870364 | 1.54E-66 | -1.69E-46 |
MS.gene056657 | MS.gene24474 | 0.863862 | 1.84E-64 | -1.69E-46 |
MS.gene056692 | MS.gene24474 | 0.886179 | 4.28E-72 | -1.69E-46 |
MS.gene056878 | MS.gene24474 | 0.806292 | 8.83E-50 | -1.69E-46 |
MS.gene056946 | MS.gene24474 | 0.805453 | 1.33E-49 | -1.69E-46 |
MS.gene057014 | MS.gene24474 | -0.827397 | 1.60E-54 | -1.69E-46 |
MS.gene057146 | MS.gene24474 | 0.804748 | 1.86E-49 | -1.69E-46 |
MS.gene057173 | MS.gene24474 | -0.806269 | 8.93E-50 | -1.69E-46 |
MS.gene057416 | MS.gene24474 | 0.847635 | 1.02E-59 | -1.69E-46 |
MS.gene057499 | MS.gene24474 | -0.800811 | 1.21E-48 | -1.69E-46 |
MS.gene057658 | MS.gene24474 | 0.825882 | 3.68E-54 | -1.69E-46 |
MS.gene057831 | MS.gene24474 | 0.874428 | 6.80E-68 | -1.69E-46 |
MS.gene05787 | MS.gene24474 | 0.804527 | 2.07E-49 | -1.69E-46 |
MS.gene058111 | MS.gene24474 | -0.809399 | 1.93E-50 | -1.69E-46 |
MS.gene058157 | MS.gene24474 | 0.841703 | 4.05E-58 | -1.69E-46 |
MS.gene058171 | MS.gene24474 | -0.806059 | 9.88E-50 | -1.69E-46 |
MS.gene058175 | MS.gene24474 | -0.803182 | 3.94E-49 | -1.69E-46 |
MS.gene058183 | MS.gene24474 | 0.811421 | 7.06E-51 | -1.69E-46 |
MS.gene058323 | MS.gene24474 | 0.806817 | 6.84E-50 | -1.69E-46 |
MS.gene058335 | MS.gene24474 | 0.821529 | 3.85E-53 | -1.69E-46 |
MS.gene058338 | MS.gene24474 | 0.802695 | 4.96E-49 | -1.69E-46 |
MS.gene05837 | MS.gene24474 | 0.873196 | 1.77E-67 | -1.69E-46 |
MS.gene058419 | MS.gene24474 | 0.86949 | 2.98E-66 | -1.69E-46 |
MS.gene058544 | MS.gene24474 | 0.857498 | 1.57E-62 | -1.69E-46 |
MS.gene058773 | MS.gene24474 | 0.888323 | 6.54E-73 | -1.69E-46 |
MS.gene058838 | MS.gene24474 | 0.819296 | 1.25E-52 | -1.69E-46 |
MS.gene05883 | MS.gene24474 | 0.856487 | 3.11E-62 | -1.69E-46 |
MS.gene059022 | MS.gene24474 | 0.883051 | 6.22E-71 | -1.69E-46 |
MS.gene059023 | MS.gene24474 | 0.870161 | 1.80E-66 | -1.69E-46 |
MS.gene059029 | MS.gene24474 | 0.808469 | 3.05E-50 | -1.69E-46 |
MS.gene059034 | MS.gene24474 | 0.801829 | 7.49E-49 | -1.69E-46 |
MS.gene059052 | MS.gene24474 | -0.809518 | 1.82E-50 | -1.69E-46 |
MS.gene05912 | MS.gene24474 | 0.848912 | 4.53E-60 | -1.69E-46 |
MS.gene05934 | MS.gene24474 | 0.829365 | 5.36E-55 | -1.69E-46 |
MS.gene059479 | MS.gene24474 | -0.835313 | 1.80E-56 | -1.69E-46 |
MS.gene059526 | MS.gene24474 | -0.804219 | 2.40E-49 | -1.69E-46 |
MS.gene059677 | MS.gene24474 | 0.878313 | 3.11E-69 | -1.69E-46 |
MS.gene059718 | MS.gene24474 | 0.885351 | 8.76E-72 | -1.69E-46 |
MS.gene059756 | MS.gene24474 | 0.855188 | 7.46E-62 | -1.69E-46 |
MS.gene059801 | MS.gene24474 | 0.884247 | 2.26E-71 | -1.69E-46 |
MS.gene059837 | MS.gene24474 | 0.816743 | 4.73E-52 | -1.69E-46 |
MS.gene059865 | MS.gene24474 | 0.839456 | 1.57E-57 | -1.69E-46 |
MS.gene059902 | MS.gene24474 | 0.865814 | 4.50E-65 | -1.69E-46 |
MS.gene06000 | MS.gene24474 | 0.817364 | 3.43E-52 | -1.69E-46 |
MS.gene060187 | MS.gene24474 | -0.826738 | 2.30E-54 | -1.69E-46 |
MS.gene060482 | MS.gene24474 | 0.82686 | 2.15E-54 | -1.69E-46 |
MS.gene060595 | MS.gene24474 | -0.856483 | 3.12E-62 | -1.69E-46 |
MS.gene060602 | MS.gene24474 | -0.850029 | 2.21E-60 | -1.69E-46 |
MS.gene060703 | MS.gene24474 | 0.859758 | 3.31E-63 | -1.69E-46 |
MS.gene060762 | MS.gene24474 | 0.883337 | 4.89E-71 | -1.69E-46 |
MS.gene060778 | MS.gene24474 | 0.821914 | 3.13E-53 | -1.69E-46 |
MS.gene06077 | MS.gene24474 | 0.911148 | 8.44E-83 | -1.69E-46 |
MS.gene06092 | MS.gene24474 | 0.847859 | 8.86E-60 | -1.69E-46 |
MS.gene060982 | MS.gene24474 | 0.835526 | 1.59E-56 | -1.69E-46 |
MS.gene061134 | MS.gene24474 | 0.822848 | 1.90E-53 | -1.69E-46 |
MS.gene061150 | MS.gene24474 | 0.871918 | 4.74E-67 | -1.69E-46 |
MS.gene061171 | MS.gene24474 | 0.854001 | 1.65E-61 | -1.69E-46 |
MS.gene061200 | MS.gene24474 | 0.814836 | 1.26E-51 | -1.69E-46 |
MS.gene061226 | MS.gene24474 | -0.852177 | 5.48E-61 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene016742 | MS.gene24474 | PPI |
MS.gene81622 | MS.gene24474 | PPI |
MS.gene016743 | MS.gene24474 | PPI |
MS.gene24474 | MS.gene67840 | PPI |
MS.gene24474 | MS.gene37911 | PPI |
MS.gene057886 | MS.gene24474 | PPI |
MS.gene070509 | MS.gene24474 | PPI |
MS.gene24474 | MS.gene81620 | PPI |
MS.gene24474 | MS.gene81617 | PPI |
MS.gene24474 | MS.gene016758 | PPI |
MS.gene24474 | MS.gene070503 | PPI |
MS.gene24474 | MS.gene070507 | PPI |
MS.gene070505 | MS.gene24474 | PPI |
MS.gene81615 | MS.gene24474 | PPI |
MS.gene24474 | MS.gene057884 | PPI |
MS.gene24474 | MS.gene057883 | PPI |
MS.gene24474 | MS.gene070492 | PPI |
MS.gene24474 | MS.gene070510 | PPI |
MS.gene24474 | MS.gene070511 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24474.t1 | MTR_1g115295 | 96.482 | 597 | 20 | 1 | 1 | 597 | 5 | 600 | 0.0 | 1204 |
MS.gene24474.t1 | MTR_1g018280 | 70.565 | 513 | 42 | 7 | 85 | 597 | 58 | 461 | 0.0 | 673 |
MS.gene24474.t1 | MTR_4g077700 | 26.678 | 581 | 343 | 21 | 55 | 570 | 19 | 581 | 1.58e-46 | 176 |
MS.gene24474.t1 | MTR_4g122580 | 25.514 | 584 | 339 | 17 | 55 | 566 | 19 | 578 | 5.76e-45 | 171 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24474.t1 | AT3G55400 | 73.134 | 603 | 144 | 4 | 1 | 587 | 5 | 605 | 0.0 | 914 |
MS.gene24474.t1 | AT3G55400 | 74.074 | 513 | 116 | 3 | 1 | 498 | 5 | 515 | 0.0 | 795 |
MS.gene24474.t1 | AT4G13780 | 26.049 | 572 | 344 | 19 | 55 | 565 | 20 | 573 | 2.60e-46 | 175 |
Find 173 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCATGGCCATATACCATTT+TGG | 0.158244 | 1.1:-4616908 | None:intergenic |
AAAGATGGCTGCACAAAATT+TGG | 0.164014 | 1.1:-4614602 | None:intergenic |
AACGATTTGGTTAGTAAGTT+TGG | 0.200559 | 1.1:+4618664 | MS.gene24474:CDS |
TTCCTCAGAGAGGTGGAATT+TGG | 0.232008 | 1.1:+4618709 | MS.gene24474:CDS |
CGACGCCATTGCTCGATTTC+AGG | 0.234183 | 1.1:+4613238 | MS.gene24474:CDS |
TGGCAGGAAATCTTCTTAAT+AGG | 0.253659 | 1.1:+4618905 | MS.gene24474:intron |
TGTAATTTGACAGCGGCTTT+TGG | 0.258469 | 1.1:+4613490 | MS.gene24474:intron |
TACGTTTCCATGCTGTTTAT+TGG | 0.262142 | 1.1:+4616851 | MS.gene24474:CDS |
AGAAGAAGGGAAATGGAAAT+AGG | 0.298158 | 1.1:-4613087 | None:intergenic |
TGCAGAAGGAAATGCATTTA+AGG | 0.298760 | 1.1:+4618987 | MS.gene24474:CDS |
TTCCCGAGCATCGGTTGATT+GGG | 0.300431 | 1.1:+4615575 | MS.gene24474:CDS |
GTATGGTTTGATGCTTTACT+AGG | 0.314469 | 1.1:+4615636 | MS.gene24474:CDS |
GAAACAGTGTTTAGTAAATC+AGG | 0.320253 | 1.1:-4616242 | None:intergenic |
TACGCTTGAACCAAACGATT+TGG | 0.323345 | 1.1:+4618651 | MS.gene24474:CDS |
ATCAGCTTGTGAGGCTGTTC+TGG | 0.327249 | 1.1:+4619567 | MS.gene24474:CDS |
CAACTCAAGCTCGGAGTAAC+AGG | 0.327281 | 1.1:-4620125 | None:intergenic |
TTTCCCGAGCATCGGTTGAT+TGG | 0.328655 | 1.1:+4615574 | MS.gene24474:CDS |
TACCAAGTGGGGTGGACTTA+AGG | 0.328656 | 1.1:+4620286 | MS.gene24474:CDS |
TGCAACTGCTGCCACTTCTC+AGG | 0.342700 | 1.1:+4613562 | MS.gene24474:CDS |
ATGCTCAACTTGGCTATTCC+AGG | 0.350933 | 1.1:+4620156 | MS.gene24474:CDS |
ATCAACCGATGCTCGGGAAA+TGG | 0.352674 | 1.1:-4615571 | None:intergenic |
CGTCAACGCCCCTCCCCATA+TGG | 0.359349 | 1.1:+4613190 | MS.gene24474:CDS |
ACGATTTGGTTAGTAAGTTT+GGG | 0.362204 | 1.1:+4618665 | MS.gene24474:CDS |
TAATGCTGGTAATTCCTATA+TGG | 0.374295 | 1.1:+4619597 | MS.gene24474:CDS |
CCAGCTATGCTAATGTCTGC+TGG | 0.374936 | 1.1:+4616874 | MS.gene24474:CDS |
TTCTTGAAACACAAGGCTTA+AGG | 0.378492 | 1.1:-4614511 | None:intergenic |
CCCAGGTTGCTGCATCAAAT+TGG | 0.382507 | 1.1:-4620181 | None:intergenic |
CCAGCTACACTGCACTTGAT+TGG | 0.385424 | 1.1:+4616275 | MS.gene24474:CDS |
GCCTTGTGTTTCAAGAAAAG+AGG | 0.387769 | 1.1:+4614517 | MS.gene24474:CDS |
GAGGTGTGAAACATTGGAAT+TGG | 0.388355 | 1.1:-4613051 | None:intergenic |
GAAATGGAAATAGGGTTTGT+TGG | 0.388728 | 1.1:-4613078 | None:intergenic |
ACCAAGTGGGGTGGACTTAA+GGG | 0.391465 | 1.1:+4620287 | MS.gene24474:CDS |
TGGAATAAGCGCTACCCATA+TGG | 0.393918 | 1.1:-4613205 | None:intergenic |
CACAAGCTTACAAGACGCTT+TGG | 0.398442 | 1.1:+4613618 | MS.gene24474:CDS |
GAGGTGGAATTTGGCAATGA+TGG | 0.400433 | 1.1:+4618718 | MS.gene24474:CDS |
AACTTACTAACCAAATCGTT+TGG | 0.404070 | 1.1:-4618661 | None:intergenic |
TGGGTTAAGCCTTCCCAAAA+TGG | 0.406352 | 1.1:+4616894 | MS.gene24474:CDS |
AAGAAAGTTATATTCATTAC+CGG | 0.407015 | 1.1:+4613515 | MS.gene24474:CDS |
TGTGAGGCTGTTCTGGAGAT+TGG | 0.410328 | 1.1:+4619574 | MS.gene24474:CDS |
AGCCTTCCCAAAATGGTATA+TGG | 0.410553 | 1.1:+4616901 | MS.gene24474:CDS |
CAGCCTCACAAGCTGATGTC+AGG | 0.412097 | 1.1:-4619561 | None:intergenic |
TTGCAGAAGAAAGCTGCTCT+TGG | 0.421073 | 1.1:-4613110 | None:intergenic |
CCAATCAAGTGCAGTGTAGC+TGG | 0.425417 | 1.1:-4616275 | None:intergenic |
TGTCAGCTGTGAAGAATATA+AGG | 0.426210 | 1.1:+4614199 | MS.gene24474:CDS |
CATTTACCGAGCTGATTATG+AGG | 0.426407 | 1.1:+4614166 | MS.gene24474:CDS |
ATTCCTTTACCTCGTGTAAA+CGG | 0.431671 | 1.1:-4614625 | None:intergenic |
CTCTTGGAGAAGAAGGGAAA+TGG | 0.439070 | 1.1:-4613094 | None:intergenic |
GAAGAAGGGAAATGGAAATA+GGG | 0.439147 | 1.1:-4613086 | None:intergenic |
ACCAATTTGATGCAGCAACC+TGG | 0.442225 | 1.1:+4620180 | MS.gene24474:CDS |
AGCAATGGCGTCGGCGGCGA+TGG | 0.443811 | 1.1:-4613228 | None:intergenic |
GCTCAAAGTACCAATTGTAT+TGG | 0.446015 | 1.1:-4618788 | None:intergenic |
AAAGCTGCTCTTGGAGAAGA+AGG | 0.453613 | 1.1:-4613101 | None:intergenic |
TGAGTCTTGTCACTCGGAAC+AGG | 0.454916 | 1.1:-4615603 | None:intergenic |
AATTCACTGCCAGTGTTGAT+TGG | 0.457459 | 1.1:-4618954 | None:intergenic |
AATAGGGTTTGTTGGATTTG+AGG | 0.459704 | 1.1:-4613070 | None:intergenic |
AAACAAGCTCAAGAAGTTGT+TGG | 0.459841 | 1.1:+4620428 | MS.gene24474:CDS |
TTTGTCATCATTTGAGGAAG+TGG | 0.461007 | 1.1:-4613138 | None:intergenic |
GCCCCAATCAACCGATGCTC+GGG | 0.461201 | 1.1:-4615577 | None:intergenic |
TAAACACTGTTTCTTCAAGT+TGG | 0.465611 | 1.1:+4616252 | MS.gene24474:CDS |
GCACATCTTGCCAATACAAT+TGG | 0.466543 | 1.1:+4618778 | MS.gene24474:CDS |
CCAGCAGACATTAGCATAGC+TGG | 0.469425 | 1.1:-4616874 | None:intergenic |
GGAATAAGCGCTACCCATAT+GGG | 0.471131 | 1.1:-4613204 | None:intergenic |
AAGAAGACTCTGAAAAGTAA+AGG | 0.472328 | 1.1:+4620398 | MS.gene24474:CDS |
AGGGGCACGCTCGTCCATAT+AGG | 0.472951 | 1.1:-4619611 | None:intergenic |
AGAGGGGTTGTGATGACATA+GGG | 0.474816 | 1.1:-4613161 | None:intergenic |
AGAAGACTCTGAAAAGTAAA+GGG | 0.482397 | 1.1:+4620399 | MS.gene24474:CDS |
ATAGGGTTTGTCATCATTTG+AGG | 0.484471 | 1.1:-4613144 | None:intergenic |
CTGAAGTGGAAGAAGACAAA+GGG | 0.484766 | 1.1:+4620363 | MS.gene24474:CDS |
ATGTTAGGATGGTATGAAGA+TGG | 0.485616 | 1.1:+4618612 | MS.gene24474:intron |
AGGTGGAATTTGGCAATGAT+GGG | 0.485834 | 1.1:+4618719 | MS.gene24474:CDS |
CTCCCTGACATCAGCTTGTG+AGG | 0.486304 | 1.1:+4619558 | MS.gene24474:CDS |
TTAGTAAATCAGGTTGCTCC+TGG | 0.489812 | 1.1:-4616232 | None:intergenic |
GGGTGGACTTAAGGGTGGTC+AGG | 0.492564 | 1.1:+4620295 | MS.gene24474:CDS |
TGCCCCAATCAACCGATGCT+CGG | 0.495001 | 1.1:-4615578 | None:intergenic |
CTGTTACTCCGAGCTTGAGT+TGG | 0.496703 | 1.1:+4620126 | MS.gene24474:CDS |
TGTTAGGATGGTATGAAGAT+GGG | 0.497162 | 1.1:+4618613 | MS.gene24474:intron |
CTGGATCAAAAGTGGCCTGC+GGG | 0.499199 | 1.1:+4615542 | MS.gene24474:CDS |
CTCACCGTGTTCATCGGTGC+CGG | 0.502444 | 1.1:-4613534 | None:intergenic |
GCAACTGCTGCCACTTCTCA+GGG | 0.504359 | 1.1:+4613563 | MS.gene24474:CDS |
ACCCTTAAGTCCACCCCACT+TGG | 0.509023 | 1.1:-4620288 | None:intergenic |
ATGAGATTGCAGTGGTCAGT+AGG | 0.514173 | 1.1:-4613593 | None:intergenic |
TAAGGACAATGTAGCGAGGC+TGG | 0.515013 | 1.1:+4619005 | MS.gene24474:CDS |
AGACTCAGACTATATATGTA+TGG | 0.517740 | 1.1:+4615619 | MS.gene24474:CDS |
ACTTAAGGGTGGTCAGGTCA+TGG | 0.517933 | 1.1:+4620301 | MS.gene24474:CDS |
GGATTTGAGGTGTGAAACAT+TGG | 0.518965 | 1.1:-4613057 | None:intergenic |
ATTGGAACGGAGTGAAAGAA+TGG | 0.519846 | 1.1:-4613033 | None:intergenic |
CTATTTGGTGCAGGATGAGA+AGG | 0.519918 | 1.1:+4614457 | MS.gene24474:intron |
AAGAGGGGTTGTGATGACAT+AGG | 0.521343 | 1.1:-4613162 | None:intergenic |
TATGGTTTGATGCTTTACTA+GGG | 0.525816 | 1.1:+4615637 | MS.gene24474:CDS |
TGAGATTGCAGTGGTCAGTA+GGG | 0.526148 | 1.1:-4613592 | None:intergenic |
AATCTTCTTAATAGGACTCT+AGG | 0.528211 | 1.1:+4618913 | MS.gene24474:CDS |
ATCCTAGCAAAGACTGGTTG+AGG | 0.529078 | 1.1:-4620329 | None:intergenic |
CCTTGGTCTCTCTTTAAGCA+AGG | 0.530338 | 1.1:+4619631 | MS.gene24474:CDS |
TGCTGCATCAAATTGGTCCC+TGG | 0.531484 | 1.1:-4620174 | None:intergenic |
CAGCTATGCTAATGTCTGCT+GGG | 0.531516 | 1.1:+4616875 | MS.gene24474:CDS |
GTTCTGGAGATTGGTAATGC+TGG | 0.538081 | 1.1:+4619583 | MS.gene24474:CDS |
CCCAAAATGGTATATGGCCA+TGG | 0.540455 | 1.1:+4616907 | MS.gene24474:CDS |
TGCTTCTGAAGCAGCTGCCA+AGG | 0.545752 | 1.1:+4619660 | MS.gene24474:CDS |
TCCCGAGCATCGGTTGATTG+GGG | 0.545821 | 1.1:+4615576 | MS.gene24474:CDS |
CCAATTTGATGCAGCAACCT+GGG | 0.549013 | 1.1:+4620181 | MS.gene24474:CDS |
ATGAAGATGGGCAAGTCACT+AGG | 0.550900 | 1.1:+4618625 | MS.gene24474:CDS |
ATATGGACGAGCGTGCCCCT+TGG | 0.551543 | 1.1:+4619614 | MS.gene24474:CDS |
AGCTCGGTAAATGTCACCAT+TGG | 0.558279 | 1.1:-4614156 | None:intergenic |
GTCAACGCCCCTCCCCATAT+GGG | 0.558701 | 1.1:+4613191 | MS.gene24474:CDS |
TTGAAACACAAGGCTTAAGG+TGG | 0.560531 | 1.1:-4614508 | None:intergenic |
CTGTCTCTAATATAATTACA+AGG | 0.560785 | 1.1:-4620076 | None:intergenic |
TATTCGAGAGTGCTTGCCAA+TGG | 0.562606 | 1.1:+4614140 | MS.gene24474:CDS |
ACCTCGTGTAAACGGAAAGA+TGG | 0.565307 | 1.1:-4614617 | None:intergenic |
AACCTCAACCAGTCTTTGCT+AGG | 0.566335 | 1.1:+4620327 | MS.gene24474:CDS |
TATATTCTCCAACTCAAGCT+CGG | 0.567513 | 1.1:-4620134 | None:intergenic |
GTCAAAATATCAGAAGTCAC+TGG | 0.568046 | 1.1:+4614559 | MS.gene24474:CDS |
ATCAGCACTAGCTGATGACC+AGG | 0.568431 | 1.1:+4616214 | MS.gene24474:CDS |
ATACTTCTTCCTCAGAGAGG+TGG | 0.569549 | 1.1:+4618702 | MS.gene24474:CDS |
ATACCTTTGTCAAGAATCCA+TGG | 0.573946 | 1.1:-4616924 | None:intergenic |
GATTGAAAATCAAACTGAAG+TGG | 0.574353 | 1.1:+4620349 | MS.gene24474:CDS |
GGGGCGTTGACGTAGTAAAG+AGG | 0.574782 | 1.1:-4613179 | None:intergenic |
TAAATTTCTAGGTTCAAACC+TGG | 0.577775 | 1.1:+4615523 | MS.gene24474:intron |
GTTCAAACCTGGATCAAAAG+TGG | 0.577799 | 1.1:+4615534 | MS.gene24474:CDS |
AATGGCGTCGGCGGCGATGG+TGG | 0.578592 | 1.1:-4613225 | None:intergenic |
TACACTGCACTTGATTGGTA+AGG | 0.579282 | 1.1:+4616280 | MS.gene24474:CDS |
TGCTCAACTTGGCTATTCCA+GGG | 0.580797 | 1.1:+4620157 | MS.gene24474:CDS |
AGCGCTACCCATATGGGGAG+GGG | 0.586669 | 1.1:-4613198 | None:intergenic |
ATTGCAGTGGTCAGTAGGGG+TGG | 0.588624 | 1.1:-4613588 | None:intergenic |
GGGCGTTGACGTAGTAAAGA+GGG | 0.589011 | 1.1:-4613178 | None:intergenic |
AAATCGAGCAATGGCGTCGG+CGG | 0.591504 | 1.1:-4613234 | None:intergenic |
AATTCCACTACGGCTGCAGA+AGG | 0.591965 | 1.1:+4618973 | MS.gene24474:CDS |
AGCCTCACAAGCTGATGTCA+GGG | 0.594895 | 1.1:-4619560 | None:intergenic |
TGGAGAATATATGCTCAACT+TGG | 0.596758 | 1.1:+4620146 | MS.gene24474:CDS |
ACACAAGGCTTAAGGTGGAT+CGG | 0.602973 | 1.1:-4614503 | None:intergenic |
ATTTACCGAGCTGATTATGA+GGG | 0.603837 | 1.1:+4614167 | MS.gene24474:CDS |
CCTTGCTTAAAGAGAGACCA+AGG | 0.604022 | 1.1:-4619631 | None:intergenic |
AAAGAACTGCCAATCAACAC+TGG | 0.604833 | 1.1:+4618945 | MS.gene24474:CDS |
CAAGCATGAAGCAGTTGTGA+AGG | 0.607264 | 1.1:+4614112 | MS.gene24474:CDS |
AGGGGTGGAACCCTGAGAAG+TGG | 0.613335 | 1.1:-4613573 | None:intergenic |
TAGCTGGCCAATAAACAGCA+TGG | 0.614722 | 1.1:-4616858 | None:intergenic |
AAATTCCCTCATAATCAGCT+CGG | 0.616005 | 1.1:-4614172 | None:intergenic |
GGGAAATGGAAAAGTCCCGC+AGG | 0.620262 | 1.1:-4615557 | None:intergenic |
ATTACCGGCACCGATGAACA+CGG | 0.621414 | 1.1:+4613530 | MS.gene24474:CDS |
AAGCGCTACCCATATGGGGA+GGG | 0.629346 | 1.1:-4613199 | None:intergenic |
GTGAAACATTGGAATTGGAA+CGG | 0.630511 | 1.1:-4613046 | None:intergenic |
ATTTCCTTCTGCAGCCGTAG+TGG | 0.632038 | 1.1:-4618977 | None:intergenic |
AAGCTGCTCTTGGAGAAGAA+GGG | 0.636630 | 1.1:-4613100 | None:intergenic |
GCCATCTTTCCGTTTACACG+AGG | 0.638336 | 1.1:+4614616 | MS.gene24474:CDS |
GAAGACAAAGGGGTTGCAGT+CGG | 0.640051 | 1.1:+4620374 | MS.gene24474:CDS |
TAGAGAGATACCAAGTGGGG+TGG | 0.641306 | 1.1:+4620278 | MS.gene24474:intron |
ATAGTCTGAGTCTTGTCACT+CGG | 0.651357 | 1.1:-4615609 | None:intergenic |
CAATGATGGGGACTATTCAG+AGG | 0.651752 | 1.1:+4618732 | MS.gene24474:CDS |
CTGAAATCGAGCAATGGCGT+CGG | 0.652722 | 1.1:-4613237 | None:intergenic |
ACTGGCAGTGAATTCCACTA+CGG | 0.653538 | 1.1:+4618963 | MS.gene24474:CDS |
ACTGAAGTGGAAGAAGACAA+AGG | 0.655968 | 1.1:+4620362 | MS.gene24474:CDS |
GAGATTGCAGTGGTCAGTAG+GGG | 0.659757 | 1.1:-4613591 | None:intergenic |
TGCCAAATTCCACCTCTCTG+AGG | 0.662782 | 1.1:-4618711 | None:intergenic |
AGGTACCTGAAATCGAGCAA+TGG | 0.663948 | 1.1:-4613243 | None:intergenic |
ATTGTAGAGAGATACCAAGT+GGG | 0.663995 | 1.1:+4620274 | MS.gene24474:intron |
CCTGGATCAAAAGTGGCCTG+CGG | 0.665415 | 1.1:+4615541 | MS.gene24474:CDS |
TGGTCTCTCTTTAAGCAAGG+AGG | 0.665745 | 1.1:+4619634 | MS.gene24474:CDS |
CATTGTAGAGAGATACCAAG+TGG | 0.666340 | 1.1:+4620273 | MS.gene24474:intron |
CTTGCTTAAAGAGAGACCAA+GGG | 0.666502 | 1.1:-4619630 | None:intergenic |
TAAGCGCTACCCATATGGGG+AGG | 0.670114 | 1.1:-4613200 | None:intergenic |
TAGATACTTCTTCCTCAGAG+AGG | 0.671329 | 1.1:+4618699 | MS.gene24474:CDS |
GGTGGAATTTGGCAATGATG+GGG | 0.671855 | 1.1:+4618720 | MS.gene24474:CDS |
TGGCCATGGATTCTTGACAA+AGG | 0.674126 | 1.1:+4616921 | MS.gene24474:CDS |
TGATAAGTTCATTAGAACAA+CGG | 0.677637 | 1.1:+4614085 | MS.gene24474:CDS |
AAAATATCAGAAGTCACTGG+AGG | 0.677971 | 1.1:+4614562 | MS.gene24474:CDS |
GAATAAGCGCTACCCATATG+GGG | 0.679075 | 1.1:-4613203 | None:intergenic |
GGCGTTGACGTAGTAAAGAG+GGG | 0.679296 | 1.1:-4613177 | None:intergenic |
AGTAACAGGAGATAGTGCAA+TGG | 0.702926 | 1.1:-4620111 | None:intergenic |
TTGTAGAGAGATACCAAGTG+GGG | 0.703831 | 1.1:+4620275 | MS.gene24474:intron |
CATTTAAGGACAATGTAGCG+AGG | 0.708225 | 1.1:+4619001 | MS.gene24474:CDS |
TTGCTTAAAGAGAGACCAAG+GGG | 0.714060 | 1.1:-4619629 | None:intergenic |
AAGTGGGGTGGACTTAAGGG+TGG | 0.722735 | 1.1:+4620290 | MS.gene24474:CDS |
TGAAGTGGAAGAAGACAAAG+GGG | 0.736463 | 1.1:+4620364 | MS.gene24474:CDS |
CTTGTGAAATGAGATTGCAG+TGG | 0.809288 | 1.1:-4613601 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 4613005 | 4620457 | 4613005 | ID=MS.gene24474 |
chr1.1 | mRNA | 4613005 | 4620457 | 4613005 | ID=MS.gene24474.t1;Parent=MS.gene24474 |
chr1.1 | exon | 4613005 | 4613259 | 4613005 | ID=MS.gene24474.t1.exon1;Parent=MS.gene24474.t1 |
chr1.1 | CDS | 4613005 | 4613259 | 4613005 | ID=cds.MS.gene24474.t1;Parent=MS.gene24474.t1 |
chr1.1 | exon | 4613503 | 4613646 | 4613503 | ID=MS.gene24474.t1.exon2;Parent=MS.gene24474.t1 |
chr1.1 | CDS | 4613503 | 4613646 | 4613503 | ID=cds.MS.gene24474.t1;Parent=MS.gene24474.t1 |
chr1.1 | exon | 4614071 | 4614220 | 4614071 | ID=MS.gene24474.t1.exon3;Parent=MS.gene24474.t1 |
chr1.1 | CDS | 4614071 | 4614220 | 4614071 | ID=cds.MS.gene24474.t1;Parent=MS.gene24474.t1 |
chr1.1 | exon | 4614470 | 4614637 | 4614470 | ID=MS.gene24474.t1.exon4;Parent=MS.gene24474.t1 |
chr1.1 | CDS | 4614470 | 4614637 | 4614470 | ID=cds.MS.gene24474.t1;Parent=MS.gene24474.t1 |
chr1.1 | exon | 4615534 | 4615658 | 4615534 | ID=MS.gene24474.t1.exon5;Parent=MS.gene24474.t1 |
chr1.1 | CDS | 4615534 | 4615658 | 4615534 | ID=cds.MS.gene24474.t1;Parent=MS.gene24474.t1 |
chr1.1 | exon | 4616208 | 4616301 | 4616208 | ID=MS.gene24474.t1.exon6;Parent=MS.gene24474.t1 |
chr1.1 | CDS | 4616208 | 4616301 | 4616208 | ID=cds.MS.gene24474.t1;Parent=MS.gene24474.t1 |
chr1.1 | exon | 4616844 | 4616942 | 4616844 | ID=MS.gene24474.t1.exon7;Parent=MS.gene24474.t1 |
chr1.1 | CDS | 4616844 | 4616942 | 4616844 | ID=cds.MS.gene24474.t1;Parent=MS.gene24474.t1 |
chr1.1 | exon | 4618619 | 4618799 | 4618619 | ID=MS.gene24474.t1.exon8;Parent=MS.gene24474.t1 |
chr1.1 | CDS | 4618619 | 4618799 | 4618619 | ID=cds.MS.gene24474.t1;Parent=MS.gene24474.t1 |
chr1.1 | exon | 4618911 | 4619026 | 4618911 | ID=MS.gene24474.t1.exon9;Parent=MS.gene24474.t1 |
chr1.1 | CDS | 4618911 | 4619026 | 4618911 | ID=cds.MS.gene24474.t1;Parent=MS.gene24474.t1 |
chr1.1 | exon | 4619526 | 4619681 | 4619526 | ID=MS.gene24474.t1.exon10;Parent=MS.gene24474.t1 |
chr1.1 | CDS | 4619526 | 4619681 | 4619526 | ID=cds.MS.gene24474.t1;Parent=MS.gene24474.t1 |
chr1.1 | exon | 4620074 | 4620202 | 4620074 | ID=MS.gene24474.t1.exon11;Parent=MS.gene24474.t1 |
chr1.1 | CDS | 4620074 | 4620202 | 4620074 | ID=cds.MS.gene24474.t1;Parent=MS.gene24474.t1 |
chr1.1 | exon | 4620281 | 4620457 | 4620281 | ID=MS.gene24474.t1.exon12;Parent=MS.gene24474.t1 |
chr1.1 | CDS | 4620281 | 4620457 | 4620281 | ID=cds.MS.gene24474.t1;Parent=MS.gene24474.t1 |
Gene Sequence |
Protein sequence |