Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94263.t1 | XP_003623173.1 | 87.5 | 224 | 28 | 0 | 1 | 224 | 1 | 224 | 1.40E-110 | 409.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94263.t1 | P32110 | 69.8 | 225 | 67 | 1 | 1 | 224 | 1 | 225 | 1.1e-84 | 314.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94263.t1 | G7L5M4 | 87.5 | 224 | 28 | 0 | 1 | 224 | 1 | 224 | 9.8e-111 | 409.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene94263 | -0.831658 | 1.47E-55 | -1.69E-46 |
| MS.gene049217 | MS.gene94263 | -0.829017 | 6.51E-55 | -1.69E-46 |
| MS.gene049222 | MS.gene94263 | -0.833156 | 6.27E-56 | -1.69E-46 |
| MS.gene049232 | MS.gene94263 | -0.826065 | 3.33E-54 | -1.69E-46 |
| MS.gene049259 | MS.gene94263 | 0.815314 | 9.85E-52 | -1.69E-46 |
| MS.gene049281 | MS.gene94263 | 0.831814 | 1.35E-55 | -1.69E-46 |
| MS.gene049285 | MS.gene94263 | -0.842054 | 3.27E-58 | -1.69E-46 |
| MS.gene049320 | MS.gene94263 | -0.859187 | 4.92E-63 | -1.69E-46 |
| MS.gene049483 | MS.gene94263 | 0.816697 | 4.84E-52 | -1.69E-46 |
| MS.gene049549 | MS.gene94263 | 0.800152 | 1.65E-48 | -1.69E-46 |
| MS.gene049611 | MS.gene94263 | 0.867154 | 1.69E-65 | -1.69E-46 |
| MS.gene049633 | MS.gene94263 | -0.809069 | 2.27E-50 | -1.69E-46 |
| MS.gene049634 | MS.gene94263 | 0.847229 | 1.32E-59 | -1.69E-46 |
| MS.gene050082 | MS.gene94263 | 0.822606 | 2.16E-53 | -1.69E-46 |
| MS.gene05010 | MS.gene94263 | -0.824982 | 6.01E-54 | -1.69E-46 |
| MS.gene050163 | MS.gene94263 | -0.831748 | 1.40E-55 | -1.69E-46 |
| MS.gene050165 | MS.gene94263 | -0.836037 | 1.18E-56 | -1.69E-46 |
| MS.gene050170 | MS.gene94263 | -0.816091 | 6.61E-52 | -1.69E-46 |
| MS.gene050216 | MS.gene94263 | -0.8278 | 1.28E-54 | -1.69E-46 |
| MS.gene050323 | MS.gene94263 | -0.831664 | 1.47E-55 | -1.69E-46 |
| MS.gene050333 | MS.gene94263 | -0.844057 | 9.57E-59 | -1.69E-46 |
| MS.gene050381 | MS.gene94263 | 0.852149 | 5.58E-61 | -1.69E-46 |
| MS.gene050444 | MS.gene94263 | -0.811707 | 6.12E-51 | -1.69E-46 |
| MS.gene050496 | MS.gene94263 | -0.846132 | 2.63E-59 | -1.69E-46 |
| MS.gene050504 | MS.gene94263 | -0.862677 | 4.28E-64 | -1.69E-46 |
| MS.gene050518 | MS.gene94263 | -0.826761 | 2.27E-54 | -1.69E-46 |
| MS.gene050577 | MS.gene94263 | -0.807189 | 5.71E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene94263 | -0.8571 | 2.05E-62 | -1.69E-46 |
| MS.gene050675 | MS.gene94263 | -0.841889 | 3.61E-58 | -1.69E-46 |
| MS.gene050699 | MS.gene94263 | -0.832164 | 1.11E-55 | -1.69E-46 |
| MS.gene050772 | MS.gene94263 | -0.832902 | 7.25E-56 | -1.69E-46 |
| MS.gene05079 | MS.gene94263 | 0.824107 | 9.66E-54 | -1.69E-46 |
| MS.gene05080 | MS.gene94263 | -0.800496 | 1.40E-48 | -1.69E-46 |
| MS.gene050868 | MS.gene94263 | -0.840465 | 8.55E-58 | -1.69E-46 |
| MS.gene050871 | MS.gene94263 | -0.83927 | 1.75E-57 | -1.69E-46 |
| MS.gene050883 | MS.gene94263 | 0.839475 | 1.55E-57 | -1.69E-46 |
| MS.gene050986 | MS.gene94263 | -0.847298 | 1.26E-59 | -1.69E-46 |
| MS.gene05100 | MS.gene94263 | -0.809417 | 1.91E-50 | -1.69E-46 |
| MS.gene051044 | MS.gene94263 | 0.823197 | 1.58E-53 | -1.69E-46 |
| MS.gene05104 | MS.gene94263 | 0.852872 | 3.47E-61 | -1.69E-46 |
| MS.gene051127 | MS.gene94263 | 0.853717 | 1.99E-61 | -1.69E-46 |
| MS.gene051138 | MS.gene94263 | 0.874328 | 7.36E-68 | -1.69E-46 |
| MS.gene051268 | MS.gene94263 | -0.801437 | 9.01E-49 | -1.69E-46 |
| MS.gene051364 | MS.gene94263 | 0.890623 | 8.33E-74 | -1.69E-46 |
| MS.gene051366 | MS.gene94263 | 0.879509 | 1.18E-69 | -1.69E-46 |
| MS.gene051367 | MS.gene94263 | 0.860799 | 1.61E-63 | -1.69E-46 |
| MS.gene051422 | MS.gene94263 | 0.833509 | 5.12E-56 | -1.69E-46 |
| MS.gene051551 | MS.gene94263 | -0.800479 | 1.41E-48 | -1.69E-46 |
| MS.gene051632 | MS.gene94263 | 0.808643 | 2.80E-50 | -1.69E-46 |
| MS.gene051651 | MS.gene94263 | 0.807291 | 5.43E-50 | -1.69E-46 |
| MS.gene051810 | MS.gene94263 | -0.809648 | 1.71E-50 | -1.69E-46 |
| MS.gene051858 | MS.gene94263 | -0.820683 | 6.02E-53 | -1.69E-46 |
| MS.gene052164 | MS.gene94263 | -0.815057 | 1.12E-51 | -1.69E-46 |
| MS.gene052211 | MS.gene94263 | 0.817322 | 3.50E-52 | -1.69E-46 |
| MS.gene052482 | MS.gene94263 | -0.829047 | 6.40E-55 | -1.69E-46 |
| MS.gene052486 | MS.gene94263 | -0.834372 | 3.11E-56 | -1.69E-46 |
| MS.gene052916 | MS.gene94263 | -0.804769 | 1.84E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene94263 | -0.810391 | 1.18E-50 | -1.69E-46 |
| MS.gene053213 | MS.gene94263 | -0.823619 | 1.26E-53 | -1.69E-46 |
| MS.gene053286 | MS.gene94263 | -0.817204 | 3.72E-52 | -1.69E-46 |
| MS.gene053420 | MS.gene94263 | 0.880096 | 7.27E-70 | -1.69E-46 |
| MS.gene053488 | MS.gene94263 | 0.843951 | 1.02E-58 | -1.69E-46 |
| MS.gene053561 | MS.gene94263 | 0.853531 | 2.25E-61 | -1.69E-46 |
| MS.gene053574 | MS.gene94263 | -0.804857 | 1.77E-49 | -1.69E-46 |
| MS.gene053887 | MS.gene94263 | 0.826724 | 2.32E-54 | -1.69E-46 |
| MS.gene054054 | MS.gene94263 | 0.824769 | 6.75E-54 | -1.69E-46 |
| MS.gene054056 | MS.gene94263 | 0.835855 | 1.32E-56 | -1.69E-46 |
| MS.gene054595 | MS.gene94263 | -0.812855 | 3.44E-51 | -1.69E-46 |
| MS.gene054616 | MS.gene94263 | 0.832215 | 1.07E-55 | -1.69E-46 |
| MS.gene054642 | MS.gene94263 | -0.830613 | 2.66E-55 | -1.69E-46 |
| MS.gene054706 | MS.gene94263 | 0.82824 | 1.00E-54 | -1.69E-46 |
| MS.gene054707 | MS.gene94263 | 0.832809 | 7.65E-56 | -1.69E-46 |
| MS.gene054708 | MS.gene94263 | 0.83429 | 3.26E-56 | -1.69E-46 |
| MS.gene05470 | MS.gene94263 | -0.825617 | 4.25E-54 | -1.69E-46 |
| MS.gene054954 | MS.gene94263 | -0.851266 | 9.92E-61 | -1.69E-46 |
| MS.gene054959 | MS.gene94263 | 0.822513 | 2.28E-53 | -1.69E-46 |
| MS.gene055124 | MS.gene94263 | 0.835167 | 1.96E-56 | -1.69E-46 |
| MS.gene055154 | MS.gene94263 | 0.897176 | 1.81E-76 | -1.69E-46 |
| MS.gene055202 | MS.gene94263 | 0.859815 | 3.19E-63 | -1.69E-46 |
| MS.gene055362 | MS.gene94263 | -0.851071 | 1.13E-60 | -1.69E-46 |
| MS.gene055502 | MS.gene94263 | -0.860055 | 2.70E-63 | -1.69E-46 |
| MS.gene055577 | MS.gene94263 | -0.83301 | 6.82E-56 | -1.69E-46 |
| MS.gene055748 | MS.gene94263 | -0.810154 | 1.33E-50 | -1.69E-46 |
| MS.gene055750 | MS.gene94263 | -0.818554 | 1.84E-52 | -1.69E-46 |
| MS.gene055751 | MS.gene94263 | -0.822179 | 2.72E-53 | -1.69E-46 |
| MS.gene055776 | MS.gene94263 | -0.819212 | 1.31E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene94263 | -0.84112 | 5.76E-58 | -1.69E-46 |
| MS.gene055942 | MS.gene94263 | 0.850949 | 1.22E-60 | -1.69E-46 |
| MS.gene056224 | MS.gene94263 | 0.842121 | 3.14E-58 | -1.69E-46 |
| MS.gene056311 | MS.gene94263 | 0.826572 | 2.52E-54 | -1.69E-46 |
| MS.gene056504 | MS.gene94263 | -0.868161 | 8.02E-66 | -1.69E-46 |
| MS.gene056510 | MS.gene94263 | -0.801985 | 6.95E-49 | -1.69E-46 |
| MS.gene056550 | MS.gene94263 | 0.815481 | 9.04E-52 | -1.69E-46 |
| MS.gene056590 | MS.gene94263 | 0.807813 | 4.21E-50 | -1.69E-46 |
| MS.gene056591 | MS.gene94263 | 0.808731 | 2.68E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene94263 | -0.852097 | 5.77E-61 | -1.69E-46 |
| MS.gene056692 | MS.gene94263 | -0.815745 | 7.90E-52 | -1.69E-46 |
| MS.gene056748 | MS.gene94263 | 0.808424 | 3.12E-50 | -1.69E-46 |
| MS.gene056761 | MS.gene94263 | 0.802716 | 4.92E-49 | -1.69E-46 |
| MS.gene056856 | MS.gene94263 | 0.839567 | 1.47E-57 | -1.69E-46 |
| MS.gene057014 | MS.gene94263 | 0.813605 | 2.35E-51 | -1.69E-46 |
| MS.gene057473 | MS.gene94263 | 0.808305 | 3.31E-50 | -1.69E-46 |
| MS.gene057548 | MS.gene94263 | 0.809192 | 2.14E-50 | -1.69E-46 |
| MS.gene057549 | MS.gene94263 | 0.8432 | 1.62E-58 | -1.69E-46 |
| MS.gene057831 | MS.gene94263 | -0.808476 | 3.04E-50 | -1.69E-46 |
| MS.gene058068 | MS.gene94263 | 0.856168 | 3.86E-62 | -1.69E-46 |
| MS.gene058093 | MS.gene94263 | 0.823477 | 1.36E-53 | -1.69E-46 |
| MS.gene058099 | MS.gene94263 | 0.869607 | 2.73E-66 | -1.69E-46 |
| MS.gene058109 | MS.gene94263 | 0.824155 | 9.41E-54 | -1.69E-46 |
| MS.gene058111 | MS.gene94263 | 0.836639 | 8.32E-57 | -1.69E-46 |
| MS.gene058117 | MS.gene94263 | 0.808152 | 3.56E-50 | -1.69E-46 |
| MS.gene058157 | MS.gene94263 | -0.811069 | 8.42E-51 | -1.69E-46 |
| MS.gene058171 | MS.gene94263 | 0.846205 | 2.51E-59 | -1.69E-46 |
| MS.gene058173 | MS.gene94263 | 0.834567 | 2.78E-56 | -1.69E-46 |
| MS.gene058175 | MS.gene94263 | 0.847984 | 8.18E-60 | -1.69E-46 |
| MS.gene058268 | MS.gene94263 | 0.854101 | 1.54E-61 | -1.69E-46 |
| MS.gene058269 | MS.gene94263 | 0.856101 | 4.04E-62 | -1.69E-46 |
| MS.gene058334 | MS.gene94263 | 0.830886 | 2.28E-55 | -1.69E-46 |
| MS.gene058341 | MS.gene94263 | 0.808157 | 3.55E-50 | -1.69E-46 |
| MS.gene05837 | MS.gene94263 | -0.818353 | 2.05E-52 | -1.69E-46 |
| MS.gene058419 | MS.gene94263 | -0.850095 | 2.12E-60 | -1.69E-46 |
| MS.gene058493 | MS.gene94263 | 0.839286 | 1.73E-57 | -1.69E-46 |
| MS.gene058494 | MS.gene94263 | 0.827595 | 1.43E-54 | -1.69E-46 |
| MS.gene058496 | MS.gene94263 | 0.815394 | 9.46E-52 | -1.69E-46 |
| MS.gene058544 | MS.gene94263 | -0.811135 | 8.14E-51 | -1.69E-46 |
| MS.gene058603 | MS.gene94263 | 0.845926 | 2.99E-59 | -1.69E-46 |
| MS.gene058628 | MS.gene94263 | 0.802854 | 4.60E-49 | -1.69E-46 |
| MS.gene058723 | MS.gene94263 | -0.80221 | 6.25E-49 | -1.69E-46 |
| MS.gene058773 | MS.gene94263 | -0.831955 | 1.24E-55 | -1.69E-46 |
| MS.gene058838 | MS.gene94263 | -0.806961 | 6.38E-50 | -1.69E-46 |
| MS.gene058840 | MS.gene94263 | 0.818412 | 1.99E-52 | -1.69E-46 |
| MS.gene058978 | MS.gene94263 | 0.801961 | 7.03E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene94263 | -0.862171 | 6.12E-64 | -1.69E-46 |
| MS.gene059023 | MS.gene94263 | -0.81986 | 9.30E-53 | -1.69E-46 |
| MS.gene059045 | MS.gene94263 | 0.831402 | 1.70E-55 | -1.69E-46 |
| MS.gene059052 | MS.gene94263 | 0.800456 | 1.43E-48 | -1.69E-46 |
| MS.gene05913 | MS.gene94263 | -0.813967 | 1.96E-51 | -1.69E-46 |
| MS.gene059223 | MS.gene94263 | 0.801669 | 8.07E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene94263 | -0.863201 | 2.95E-64 | -1.69E-46 |
| MS.gene059690 | MS.gene94263 | 0.806935 | 6.46E-50 | -1.69E-46 |
| MS.gene059694 | MS.gene94263 | 0.81397 | 1.95E-51 | -1.69E-46 |
| MS.gene059697 | MS.gene94263 | 0.810994 | 8.74E-51 | -1.69E-46 |
| MS.gene059718 | MS.gene94263 | -0.835567 | 1.56E-56 | -1.69E-46 |
| MS.gene059756 | MS.gene94263 | -0.811989 | 5.31E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene94263 | -0.862432 | 5.09E-64 | -1.69E-46 |
| MS.gene059902 | MS.gene94263 | -0.822911 | 1.84E-53 | -1.69E-46 |
| MS.gene059916 | MS.gene94263 | 0.84378 | 1.13E-58 | -1.69E-46 |
| MS.gene059953 | MS.gene94263 | 0.813448 | 2.55E-51 | -1.69E-46 |
| MS.gene059955 | MS.gene94263 | 0.811741 | 6.02E-51 | -1.69E-46 |
| MS.gene060595 | MS.gene94263 | 0.840255 | 9.71E-58 | -1.69E-46 |
| MS.gene060703 | MS.gene94263 | -0.830125 | 3.50E-55 | -1.69E-46 |
| MS.gene060762 | MS.gene94263 | -0.841069 | 5.94E-58 | -1.69E-46 |
| MS.gene060778 | MS.gene94263 | -0.83371 | 4.56E-56 | -1.69E-46 |
| MS.gene06077 | MS.gene94263 | -0.857521 | 1.54E-62 | -1.69E-46 |
| MS.gene060823 | MS.gene94263 | 0.813458 | 2.53E-51 | -1.69E-46 |
| MS.gene060982 | MS.gene94263 | -0.823595 | 1.27E-53 | -1.69E-46 |
| MS.gene061044 | MS.gene94263 | 0.803348 | 3.64E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94263.t1 | MTR_7g065270 | 87.500 | 224 | 28 | 0 | 1 | 224 | 1 | 224 | 1.19e-145 | 405 |
| MS.gene94263.t1 | MTR_7g065290 | 86.161 | 224 | 31 | 0 | 1 | 224 | 1 | 224 | 2.68e-141 | 394 |
| MS.gene94263.t1 | MTR_7g065265 | 85.268 | 224 | 33 | 0 | 1 | 224 | 1 | 224 | 7.61e-139 | 388 |
| MS.gene94263.t1 | MTR_7g065600 | 75.000 | 224 | 56 | 0 | 1 | 224 | 1 | 224 | 1.30e-122 | 347 |
| MS.gene94263.t1 | MTR_7g065590 | 75.446 | 224 | 55 | 0 | 1 | 224 | 1 | 224 | 1.29e-121 | 344 |
| MS.gene94263.t1 | MTR_7g065230 | 75.000 | 224 | 51 | 1 | 1 | 224 | 1 | 219 | 1.39e-118 | 337 |
| MS.gene94263.t1 | MTR_7g065260 | 74.222 | 225 | 57 | 1 | 1 | 224 | 8 | 232 | 1.55e-109 | 314 |
| MS.gene94263.t1 | MTR_7g065660 | 65.919 | 223 | 76 | 0 | 1 | 223 | 1 | 223 | 7.00e-108 | 310 |
| MS.gene94263.t1 | MTR_7g065720 | 66.667 | 225 | 74 | 1 | 1 | 224 | 1 | 225 | 9.77e-106 | 304 |
| MS.gene94263.t1 | MTR_7g065750 | 64.732 | 224 | 78 | 1 | 1 | 223 | 1 | 224 | 1.45e-102 | 296 |
| MS.gene94263.t1 | MTR_7g065630 | 65.297 | 219 | 72 | 1 | 1 | 219 | 19 | 233 | 9.53e-101 | 292 |
| MS.gene94263.t1 | MTR_7g065740 | 62.054 | 224 | 84 | 1 | 1 | 223 | 1 | 224 | 1.01e-100 | 291 |
| MS.gene94263.t1 | MTR_4g019790 | 61.751 | 217 | 83 | 0 | 1 | 217 | 1 | 217 | 1.13e-98 | 286 |
| MS.gene94263.t1 | MTR_7g065640 | 58.744 | 223 | 74 | 1 | 1 | 223 | 1 | 205 | 3.74e-92 | 269 |
| MS.gene94263.t1 | MTR_4g019780 | 60.465 | 215 | 83 | 2 | 2 | 215 | 3 | 216 | 4.16e-91 | 267 |
| MS.gene94263.t1 | MTR_7g065710 | 62.319 | 207 | 74 | 1 | 8 | 214 | 5 | 207 | 6.88e-89 | 261 |
| MS.gene94263.t1 | MTR_7g065680 | 62.037 | 216 | 78 | 1 | 1 | 216 | 1 | 212 | 3.37e-84 | 249 |
| MS.gene94263.t1 | MTR_7g065700 | 62.617 | 214 | 76 | 1 | 1 | 214 | 1 | 210 | 4.89e-84 | 249 |
| MS.gene94263.t1 | MTR_6g080440 | 48.558 | 208 | 105 | 2 | 7 | 213 | 3 | 209 | 2.85e-64 | 199 |
| MS.gene94263.t1 | MTR_1g090150 | 46.262 | 214 | 110 | 3 | 6 | 216 | 2 | 213 | 2.98e-61 | 191 |
| MS.gene94263.t1 | MTR_3g099757 | 46.575 | 219 | 115 | 2 | 6 | 223 | 4 | 221 | 1.81e-57 | 181 |
| MS.gene94263.t1 | MTR_5g040430 | 42.793 | 222 | 119 | 3 | 1 | 215 | 1 | 221 | 9.83e-57 | 180 |
| MS.gene94263.t1 | MTR_8g087425 | 43.981 | 216 | 119 | 2 | 4 | 218 | 2 | 216 | 2.86e-56 | 179 |
| MS.gene94263.t1 | MTR_1g090070 | 42.727 | 220 | 123 | 1 | 7 | 223 | 9 | 228 | 1.29e-54 | 174 |
| MS.gene94263.t1 | MTR_8g087410 | 42.411 | 224 | 126 | 3 | 1 | 223 | 1 | 222 | 1.43e-53 | 172 |
| MS.gene94263.t1 | MTR_4g059730 | 43.256 | 215 | 114 | 5 | 6 | 215 | 3 | 214 | 3.59e-53 | 171 |
| MS.gene94263.t1 | MTR_1g115195 | 41.743 | 218 | 124 | 2 | 7 | 221 | 3 | 220 | 1.13e-52 | 169 |
| MS.gene94263.t1 | MTR_1g090060 | 42.105 | 209 | 117 | 2 | 7 | 212 | 3 | 210 | 3.74e-51 | 166 |
| MS.gene94263.t1 | MTR_8g061950 | 42.009 | 219 | 119 | 3 | 5 | 215 | 3 | 221 | 4.64e-50 | 163 |
| MS.gene94263.t1 | MTR_1g090100 | 41.553 | 219 | 124 | 2 | 8 | 223 | 3 | 220 | 5.15e-50 | 162 |
| MS.gene94263.t1 | MTR_5g037380 | 40.807 | 223 | 122 | 3 | 1 | 215 | 1 | 221 | 1.50e-47 | 156 |
| MS.gene94263.t1 | MTR_3g467420 | 42.029 | 207 | 115 | 4 | 16 | 220 | 18 | 221 | 9.55e-47 | 154 |
| MS.gene94263.t1 | MTR_1g090090 | 39.524 | 210 | 123 | 2 | 7 | 213 | 3 | 211 | 1.16e-45 | 151 |
| MS.gene94263.t1 | MTR_3g467430 | 39.819 | 221 | 124 | 5 | 4 | 220 | 6 | 221 | 6.90e-45 | 149 |
| MS.gene94263.t1 | MTR_2g070130 | 40.777 | 206 | 117 | 5 | 6 | 209 | 3 | 205 | 2.26e-44 | 148 |
| MS.gene94263.t1 | MTR_2g070150 | 39.216 | 204 | 119 | 4 | 6 | 207 | 3 | 203 | 9.88e-44 | 146 |
| MS.gene94263.t1 | MTR_2g070140 | 40.000 | 195 | 112 | 4 | 20 | 212 | 1 | 192 | 2.09e-43 | 145 |
| MS.gene94263.t1 | MTR_4g124130 | 45.503 | 189 | 97 | 5 | 6 | 191 | 3 | 188 | 3.46e-43 | 145 |
| MS.gene94263.t1 | MTR_2g070200 | 40.196 | 204 | 118 | 3 | 6 | 207 | 3 | 204 | 2.62e-42 | 143 |
| MS.gene94263.t1 | MTR_2g070180 | 38.776 | 196 | 115 | 4 | 16 | 209 | 13 | 205 | 2.31e-41 | 140 |
| MS.gene94263.t1 | MTR_2g070120 | 37.321 | 209 | 126 | 4 | 6 | 212 | 3 | 208 | 1.39e-40 | 138 |
| MS.gene94263.t1 | MTR_8g056940 | 38.942 | 208 | 119 | 5 | 16 | 218 | 13 | 217 | 2.53e-40 | 137 |
| MS.gene94263.t1 | MTR_2g070210 | 40.566 | 212 | 117 | 7 | 6 | 212 | 3 | 210 | 2.56e-40 | 137 |
| MS.gene94263.t1 | MTR_5g076900 | 38.498 | 213 | 124 | 5 | 3 | 212 | 2 | 210 | 8.65e-38 | 131 |
| MS.gene94263.t1 | MTR_2g070070 | 37.500 | 208 | 125 | 4 | 7 | 212 | 4 | 208 | 7.72e-36 | 126 |
| MS.gene94263.t1 | MTR_2g070060 | 36.058 | 208 | 128 | 4 | 7 | 212 | 4 | 208 | 1.64e-35 | 125 |
| MS.gene94263.t1 | MTR_0186s0030 | 45.385 | 130 | 69 | 2 | 16 | 144 | 13 | 141 | 4.64e-32 | 114 |
| MS.gene94263.t1 | MTR_2g070110 | 38.000 | 200 | 118 | 4 | 7 | 204 | 4 | 199 | 6.23e-30 | 110 |
| MS.gene94263.t1 | MTR_2g072120 | 46.154 | 65 | 34 | 1 | 51 | 114 | 2 | 66 | 2.08e-15 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94263.t1 | AT3G09270 | 54.587 | 218 | 95 | 4 | 3 | 217 | 2 | 218 | 1.06e-76 | 231 |
| MS.gene94263.t1 | AT2G29420 | 46.330 | 218 | 113 | 3 | 3 | 218 | 5 | 220 | 7.92e-69 | 211 |
| MS.gene94263.t1 | AT2G29450 | 48.309 | 207 | 105 | 2 | 3 | 207 | 2 | 208 | 9.03e-59 | 185 |
| MS.gene94263.t1 | AT2G29490 | 47.368 | 209 | 107 | 3 | 1 | 207 | 1 | 208 | 2.20e-58 | 184 |
| MS.gene94263.t1 | AT2G29480 | 46.411 | 209 | 109 | 3 | 1 | 207 | 1 | 208 | 1.27e-55 | 177 |
| MS.gene94263.t1 | AT2G29440 | 45.933 | 209 | 109 | 4 | 1 | 207 | 1 | 207 | 1.82e-54 | 174 |
| MS.gene94263.t1 | AT2G29460 | 44.976 | 209 | 112 | 3 | 1 | 207 | 1 | 208 | 6.67e-54 | 172 |
| MS.gene94263.t1 | AT2G29470 | 44.286 | 210 | 113 | 4 | 1 | 207 | 1 | 209 | 1.60e-53 | 172 |
| MS.gene94263.t1 | AT1G59700 | 43.578 | 218 | 115 | 4 | 5 | 214 | 4 | 221 | 2.63e-48 | 159 |
| MS.gene94263.t1 | AT1G10370 | 39.367 | 221 | 125 | 3 | 1 | 214 | 1 | 219 | 5.76e-47 | 155 |
| MS.gene94263.t1 | AT1G59670 | 39.732 | 224 | 126 | 4 | 5 | 220 | 4 | 226 | 1.59e-46 | 154 |
| MS.gene94263.t1 | AT5G62480 | 38.667 | 225 | 127 | 4 | 8 | 222 | 9 | 232 | 3.21e-46 | 153 |
| MS.gene94263.t1 | AT1G74590 | 38.182 | 220 | 129 | 3 | 1 | 214 | 1 | 219 | 8.69e-46 | 152 |
| MS.gene94263.t1 | AT1G78370 | 40.686 | 204 | 115 | 5 | 16 | 217 | 13 | 212 | 1.29e-45 | 151 |
| MS.gene94263.t1 | AT1G78340 | 43.256 | 215 | 114 | 6 | 6 | 216 | 3 | 213 | 8.16e-45 | 149 |
| MS.gene94263.t1 | AT1G78320 | 41.063 | 207 | 117 | 4 | 6 | 210 | 3 | 206 | 4.37e-44 | 147 |
| MS.gene94263.t1 | AT1G69930 | 35.586 | 222 | 137 | 2 | 2 | 217 | 7 | 228 | 1.63e-43 | 146 |
| MS.gene94263.t1 | AT1G78380 | 42.308 | 208 | 115 | 5 | 7 | 212 | 4 | 208 | 2.22e-43 | 145 |
| MS.gene94263.t1 | AT1G17170 | 41.315 | 213 | 119 | 5 | 6 | 216 | 3 | 211 | 2.28e-43 | 145 |
| MS.gene94263.t1 | AT1G27130 | 37.333 | 225 | 132 | 4 | 1 | 217 | 1 | 224 | 2.90e-43 | 145 |
| MS.gene94263.t1 | AT1G10360 | 36.111 | 216 | 131 | 2 | 6 | 214 | 4 | 219 | 1.16e-42 | 144 |
| MS.gene94263.t1 | AT1G17180 | 41.232 | 211 | 115 | 6 | 6 | 212 | 3 | 208 | 7.13e-41 | 139 |
| MS.gene94263.t1 | AT1G27140 | 36.681 | 229 | 133 | 6 | 1 | 219 | 1 | 227 | 5.63e-40 | 137 |
| MS.gene94263.t1 | AT1G53680 | 38.208 | 212 | 126 | 4 | 1 | 209 | 1 | 210 | 5.05e-39 | 134 |
| MS.gene94263.t1 | AT1G69920 | 34.649 | 228 | 139 | 4 | 1 | 218 | 26 | 253 | 3.16e-38 | 133 |
| MS.gene94263.t1 | AT1G17190 | 42.697 | 178 | 97 | 4 | 16 | 191 | 14 | 188 | 9.51e-38 | 131 |
| MS.gene94263.t1 | AT1G78360 | 39.713 | 209 | 120 | 5 | 7 | 212 | 4 | 209 | 3.85e-37 | 129 |
| MS.gene94263.t1 | AT3G43800 | 39.713 | 209 | 113 | 9 | 4 | 204 | 2 | 205 | 2.39e-36 | 127 |
| MS.gene94263.t1 | AT5G62480 | 31.278 | 227 | 115 | 6 | 8 | 222 | 9 | 206 | 1.87e-27 | 104 |
| MS.gene94263.t1 | AT5G62480 | 31.278 | 227 | 114 | 6 | 8 | 222 | 9 | 205 | 2.03e-27 | 104 |
| MS.gene94263.t1 | AT1G78320 | 33.010 | 206 | 108 | 4 | 6 | 210 | 3 | 179 | 6.19e-26 | 100 |
| MS.gene94263.t1 | AT2G02380 | 26.977 | 215 | 138 | 6 | 5 | 207 | 9 | 216 | 5.73e-13 | 66.2 |
Find 44 sgRNAs with CRISPR-Local
Find 130 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAGCCTTGGCTCGTTTC+TGG | 0.120947 | 7.3:+40615170 | MS.gene94263:CDS |
| TACCTTGTCATCTATGAAAT+TGG | 0.247936 | 7.3:-40615194 | None:intergenic |
| AATTTCCAAAGCTTTATAAT+TGG | 0.263061 | 7.3:+40616727 | MS.gene94263:CDS |
| ACAGGAACTTTCTTATAAAC+AGG | 0.283283 | 7.3:-40615046 | None:intergenic |
| TTGGGTGGTTGTTGAATTCT+TGG | 0.290435 | 7.3:-40616752 | None:intergenic |
| GAGCTCAAAGACAAATTCTT+TGG | 0.309252 | 7.3:+40616603 | MS.gene94263:CDS |
| CTCTACGATGGCATCAAATA+AGG | 0.319615 | 7.3:+40614886 | None:intergenic |
| AAATATGAGAACGAAGAGTT+TGG | 0.334423 | 7.3:+40614992 | MS.gene94263:CDS |
| TGGCTCCAATTATAAAGCTT+TGG | 0.343224 | 7.3:-40616732 | None:intergenic |
| TAAGGATCAGAAGGTAAGAT+AGG | 0.374446 | 7.3:-40615145 | None:intergenic |
| AGTTCAAATGCTTCTTGTAC+AGG | 0.398599 | 7.3:-40616684 | None:intergenic |
| CAACAACCACCCAATTGTTA+AGG | 0.408785 | 7.3:+40616761 | MS.gene94263:CDS |
| GCCTCCAAGAGAGACCCTTT+TGG | 0.422980 | 7.3:+40616791 | MS.gene94263:CDS |
| TGGTCAACCAGGGTGGAAAT+AGG | 0.427757 | 7.3:+40614944 | MS.gene94263:CDS |
| TTCTTTGGTGGGGAGGAGAT+TGG | 0.431190 | 7.3:+40616618 | MS.gene94263:CDS |
| AATATGAGAACGAAGAGTTT+GGG | 0.460478 | 7.3:+40614993 | MS.gene94263:CDS |
| GCCAAAAGGGTCTCTCTTGG+AGG | 0.494031 | 7.3:-40616792 | None:intergenic |
| ATCACAAGTGACTCTGCTAT+AGG | 0.496284 | 7.3:-40615088 | None:intergenic |
| CTCAAAGACAAATTCTTTGG+TGG | 0.503966 | 7.3:+40616606 | MS.gene94263:CDS |
| AATGCCAAAAGGGTCTCTCT+TGG | 0.504098 | 7.3:-40616795 | None:intergenic |
| TTGAGTATATTGATGAGACT+TGG | 0.504629 | 7.3:+40615113 | MS.gene94263:CDS |
| GAGCTTTGTAGAATGCCAAA+AGG | 0.508352 | 7.3:-40616806 | None:intergenic |
| TGGGAAGTCCATGGTCAACC+AGG | 0.514711 | 7.3:+40614933 | MS.gene94263:CDS |
| TCAAAGACAAATTCTTTGGT+GGG | 0.523453 | 7.3:+40616607 | MS.gene94263:CDS |
| AGAACGTGAGAAGAGTATTG+AGG | 0.526929 | 7.3:+40616548 | MS.gene94263:CDS |
| GGAAATAGGTCTAAAGTTGA+AGG | 0.528369 | 7.3:+40614958 | MS.gene94263:CDS |
| TTGGAATTGTGGGAAGTCCA+TGG | 0.541617 | 7.3:+40614924 | MS.gene94263:CDS |
| TGATCCTTACAAAAGAGCCT+TGG | 0.548089 | 7.3:+40615159 | MS.gene94263:CDS |
| ATCAAATAAGGAAGAGGTGA+AGG | 0.549693 | 7.3:+40614898 | MS.gene94263:CDS |
| CAGGAACTTTCTTATAAACA+GGG | 0.557657 | 7.3:-40615045 | None:intergenic |
| ATTTCCACCCTGGTTGACCA+TGG | 0.559064 | 7.3:-40614941 | None:intergenic |
| GAGTATTGAGGAAACAAAAG+AGG | 0.559224 | 7.3:+40616560 | MS.gene94263:CDS |
| AGCTTTGTAGAATGCCAAAA+GGG | 0.565015 | 7.3:-40616805 | None:intergenic |
| CAAAGACAAATTCTTTGGTG+GGG | 0.574827 | 7.3:+40616608 | MS.gene94263:CDS |
| AGACAAATTCTTTGGTGGGG+AGG | 0.574875 | 7.3:+40616611 | MS.gene94263:CDS |
| GATGGCATCAAATAAGGAAG+AGG | 0.575114 | 7.3:+40614892 | None:intergenic |
| CTTTAGACCTATTTCCACCC+TGG | 0.585281 | 7.3:-40614951 | None:intergenic |
| ACCAGTATATGAATGATGTA+CGG | 0.587131 | 7.3:+40616499 | MS.gene94263:intron |
| ACTGAAATTGTTCACTAGTG+AGG | 0.589749 | 7.3:+40616704 | MS.gene94263:CDS |
| GAAATAGGTCTAAAGTTGAA+GGG | 0.606081 | 7.3:+40614959 | MS.gene94263:CDS |
| GACCAATTTCATAGATGACA+AGG | 0.652027 | 7.3:+40615192 | MS.gene94263:CDS |
| GGGAAGTCCATGGTCAACCA+GGG | 0.664739 | 7.3:+40614934 | MS.gene94263:CDS |
| ATTGGTCCAGAAACGAGCCA+AGG | 0.674174 | 7.3:-40615176 | None:intergenic |
| AAGTCCATGGTCAACCAGGG+TGG | 0.678748 | 7.3:+40614937 | MS.gene94263:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAACCTATAAAAAATAA+CGG | - | chr7.3:40616012-40616031 | None:intergenic | 10.0% |
| !! | AAATCAAAAGAAAAATAATT+TGG | - | chr7.3:40615575-40615594 | None:intergenic | 10.0% |
| !! | AATCAAAAGAAAAATAATTT+GGG | - | chr7.3:40615574-40615593 | None:intergenic | 10.0% |
| !! | GAAAATAAAAATAAAAATGT+TGG | + | chr7.3:40615935-40615954 | MS.gene94263:intron | 10.0% |
| !!! | AATTTTAATGAAAAAATATG+AGG | - | chr7.3:40615627-40615646 | None:intergenic | 10.0% |
| !!! | ATTAAATTATGTTATTTGTT+AGG | - | chr7.3:40615329-40615348 | None:intergenic | 10.0% |
| !!! | ATTTTAATGAAAAAATATGA+GGG | - | chr7.3:40615626-40615645 | None:intergenic | 10.0% |
| !!! | TTAATTAATTTGTTTTGTAT+AGG | - | chr7.3:40616402-40616421 | None:intergenic | 10.0% |
| !! | AAAAACCTATAAAAAATAAC+GGG | - | chr7.3:40616011-40616030 | None:intergenic | 15.0% |
| !!! | AGCATTAAATATGTTTTTTT+AGG | + | chr7.3:40615281-40615300 | MS.gene94263:intron | 15.0% |
| !!! | CATTAAATATGTTTTTTTAG+GGG | + | chr7.3:40615283-40615302 | MS.gene94263:intron | 15.0% |
| !!! | GCATTAAATATGTTTTTTTA+GGG | + | chr7.3:40615282-40615301 | MS.gene94263:intron | 15.0% |
| !!! | TTTATTTTTTACAGTTAACA+TGG | + | chr7.3:40616447-40616466 | MS.gene94263:intron | 15.0% |
| !! | AAACTTAGATGAGATTATTT+GGG | + | chr7.3:40616134-40616153 | MS.gene94263:intron | 20.0% |
| !! | ACATAAAAAACTCAAAAAAG+TGG | - | chr7.3:40616074-40616093 | None:intergenic | 20.0% |
| !! | ATAAAAAGAAGTTTAGAAGA+AGG | - | chr7.3:40616316-40616335 | None:intergenic | 20.0% |
| !! | ATCTAAGTTTGTATATGAAT+TGG | - | chr7.3:40616124-40616143 | None:intergenic | 20.0% |
| !! | TATTTAATGCTAACTAAAGT+TGG | - | chr7.3:40615272-40615291 | None:intergenic | 20.0% |
| !! | TCTAAGTTTGTATATGAATT+GGG | - | chr7.3:40616123-40616142 | None:intergenic | 20.0% |
| !!! | AATTTCCAAAGCTTTATAAT+TGG | + | chr7.3:40616727-40616746 | MS.gene94263:CDS | 20.0% |
| !!! | TTGAGTTTAAATTCAGTTTT+GGG | + | chr7.3:40616180-40616199 | MS.gene94263:intron | 20.0% |
| !!! | TTTTATTTTCATAGGAAAGA+AGG | - | chr7.3:40615925-40615944 | None:intergenic | 20.0% |
| ! | AATAAAAATGTTGGCATTAG+TGG | + | chr7.3:40615944-40615963 | MS.gene94263:intron | 25.0% |
| ! | ATAAAAATGTTGGCATTAGT+GGG | + | chr7.3:40615945-40615964 | MS.gene94263:intron | 25.0% |
| ! | CAAACTTAGATGAGATTATT+TGG | + | chr7.3:40616133-40616152 | MS.gene94263:intron | 25.0% |
| ! | TGATTTATGACAAAAACCTT+TGG | + | chr7.3:40615893-40615912 | MS.gene94263:intron | 25.0% |
| !! | GCAATTTTTCCTTAACAATT+GGG | - | chr7.3:40616773-40616792 | None:intergenic | 25.0% |
| !! | GTTGAGTTTAAATTCAGTTT+TGG | + | chr7.3:40616179-40616198 | MS.gene94263:intron | 25.0% |
| !!! | TATAAAAAATAACGGGTTTC+AGG | - | chr7.3:40616004-40616023 | None:intergenic | 25.0% |
| !!! | TGAAACCCGTTATTTTTTAT+AGG | + | chr7.3:40616003-40616022 | MS.gene94263:intron | 25.0% |
| AAATATGAGAACGAAGAGTT+TGG | + | chr7.3:40614992-40615011 | MS.gene94263:CDS | 30.0% | |
| AATATGAGAACGAAGAGTTT+GGG | + | chr7.3:40614993-40615012 | MS.gene94263:CDS | 30.0% | |
| ACACACACAAAAATTGAAGA+GGG | - | chr7.3:40615228-40615247 | None:intergenic | 30.0% | |
| ACAGGAACTTTCTTATAAAC+AGG | - | chr7.3:40615049-40615068 | None:intergenic | 30.0% | |
| ACCAGTATATGAATGATGTA+CGG | + | chr7.3:40616499-40616518 | MS.gene94263:intron | 30.0% | |
| CAGGAACTTTCTTATAAACA+GGG | - | chr7.3:40615048-40615067 | None:intergenic | 30.0% | |
| CTCAACACCTTGATTATAAT+AGG | - | chr7.3:40616165-40616184 | None:intergenic | 30.0% | |
| GGTCTTTCCTATTATAATCA+AGG | + | chr7.3:40616155-40616174 | MS.gene94263:intron | 30.0% | |
| TACCTTGTCATCTATGAAAT+TGG | - | chr7.3:40615197-40615216 | None:intergenic | 30.0% | |
| TCAAAGACAAATTCTTTGGT+GGG | + | chr7.3:40616607-40616626 | MS.gene94263:CDS | 30.0% | |
| TTGAGTATATTGATGAGACT+TGG | + | chr7.3:40615113-40615132 | MS.gene94263:CDS | 30.0% | |
| TTGCCATTATGAACAAAAAC+AGG | - | chr7.3:40615067-40615086 | None:intergenic | 30.0% | |
| TTTGTATAGGAAGTCTTCTA+TGG | - | chr7.3:40616389-40616408 | None:intergenic | 30.0% | |
| ! | AGAATGTCTTGTGTCAATTT+TGG | + | chr7.3:40615860-40615879 | MS.gene94263:intron | 30.0% |
| ! | ATTTTTCCTTAACAATTGGG+TGG | - | chr7.3:40616770-40616789 | None:intergenic | 30.0% |
| ! | GAAATAGGTCTAAAGTTGAA+GGG | + | chr7.3:40614959-40614978 | MS.gene94263:CDS | 30.0% |
| ! | GGCAATTTTTCCTTAACAAT+TGG | - | chr7.3:40616774-40616793 | None:intergenic | 30.0% |
| ! | TATACTGGTCTCACAAATTA+AGG | - | chr7.3:40616488-40616507 | None:intergenic | 30.0% |
| ! | TGTGATACTATTGACTAGTT+TGG | + | chr7.3:40615503-40615522 | MS.gene94263:intron | 30.0% |
| ! | TTTTTATGTGAGTTTAACCG+TGG | + | chr7.3:40616085-40616104 | MS.gene94263:intron | 30.0% |
| !!! | GTTCCTGTTTTTGTTCATAA+TGG | + | chr7.3:40615061-40615080 | MS.gene94263:CDS | 30.0% |
| !!! | GTTTTTTTAGGGGATTGTTA+GGG | + | chr7.3:40615293-40615312 | MS.gene94263:intron | 30.0% |
| !!! | TGTTTTTTTAGGGGATTGTT+AGG | + | chr7.3:40615292-40615311 | MS.gene94263:intron | 30.0% |
| !!! | TTTTTTTAGGGGATTGTTAG+GGG | + | chr7.3:40615294-40615313 | MS.gene94263:intron | 30.0% |
| AACCCAGACTGAAAATTAGT+GGG | - | chr7.3:40615533-40615552 | None:intergenic | 35.0% | |
| ACTGAAATTGTTCACTAGTG+AGG | + | chr7.3:40616704-40616723 | MS.gene94263:CDS | 35.0% | |
| AGTTCAAATGCTTCTTGTAC+AGG | - | chr7.3:40616687-40616706 | None:intergenic | 35.0% | |
| ATCAAATAAGGAAGAGGTGA+AGG | + | chr7.3:40614898-40614917 | MS.gene94263:CDS | 35.0% | |
| ATCCTATACGATTATGGTCT+TGG | - | chr7.3:40615452-40615471 | None:intergenic | 35.0% | |
| CAAAGACAAATTCTTTGGTG+GGG | + | chr7.3:40616608-40616627 | MS.gene94263:CDS | 35.0% | |
| CACACACAAAAATTGAAGAG+GGG | - | chr7.3:40615227-40615246 | None:intergenic | 35.0% | |
| CACACACACAAAAATTGAAG+AGG | - | chr7.3:40615229-40615248 | None:intergenic | 35.0% | |
| CACAGTATCCTATACGATTA+TGG | - | chr7.3:40615458-40615477 | None:intergenic | 35.0% | |
| CATAATCGTATAGGATACTG+TGG | + | chr7.3:40615456-40615475 | MS.gene94263:intron | 35.0% | |
| CTAGTCAATAGTATCACAGT+TGG | - | chr7.3:40615501-40615520 | None:intergenic | 35.0% | |
| CTCAAAGACAAATTCTTTGG+TGG | + | chr7.3:40616606-40616625 | MS.gene94263:CDS | 35.0% | |
| GACCAATTTCATAGATGACA+AGG | + | chr7.3:40615192-40615211 | MS.gene94263:CDS | 35.0% | |
| GAGCTCAAAGACAAATTCTT+TGG | + | chr7.3:40616603-40616622 | MS.gene94263:CDS | 35.0% | |
| GATCCAAAAAGATATGACCA+CGG | - | chr7.3:40616661-40616680 | None:intergenic | 35.0% | |
| TAAGGATCAGAAGGTAAGAT+AGG | - | chr7.3:40615148-40615167 | None:intergenic | 35.0% | |
| TCCGTACATCATTCATATAC+TGG | - | chr7.3:40616503-40616522 | None:intergenic | 35.0% | |
| TCCTATACGATTATGGTCTT+GGG | - | chr7.3:40615451-40615470 | None:intergenic | 35.0% | |
| TGGCTCCAATTATAAAGCTT+TGG | - | chr7.3:40616735-40616754 | None:intergenic | 35.0% | |
| ! | AAACCCACTAATTTTCAGTC+TGG | + | chr7.3:40615527-40615546 | MS.gene94263:intron | 35.0% |
| ! | AACCCACTAATTTTCAGTCT+GGG | + | chr7.3:40615528-40615547 | MS.gene94263:intron | 35.0% |
| ! | AGAGCGTTTAGATGAGATTA+GGG | + | chr7.3:40615389-40615408 | MS.gene94263:intron | 35.0% |
| ! | AGCTTTGTAGAATGCCAAAA+GGG | - | chr7.3:40616808-40616827 | None:intergenic | 35.0% |
| ! | GGAAATAGGTCTAAAGTTGA+AGG | + | chr7.3:40614958-40614977 | MS.gene94263:CDS | 35.0% |
| !! | AAGAGCGTTTAGATGAGATT+AGG | + | chr7.3:40615388-40615407 | MS.gene94263:intron | 35.0% |
| !! | GAGTATTGAGGAAACAAAAG+AGG | + | chr7.3:40616560-40616579 | MS.gene94263:CDS | 35.0% |
| !! | TCAAAAAAGTGGACTGAGTT+GGG | - | chr7.3:40616063-40616082 | None:intergenic | 35.0% |
| !!! | GTGAAGGTTTTTGGAATTGT+GGG | + | chr7.3:40614914-40614933 | MS.gene94263:CDS | 35.0% |
| ACCCAAGACCATAATCGTAT+AGG | + | chr7.3:40615447-40615466 | MS.gene94263:intron | 40.0% | |
| ACTAAAGTTGGATGCGAACT+TGG | - | chr7.3:40615260-40615279 | None:intergenic | 40.0% | |
| ATCACAAGTGACTCTGCTAT+AGG | - | chr7.3:40615091-40615110 | None:intergenic | 40.0% | |
| CAACAACCACCCAATTGTTA+AGG | + | chr7.3:40616761-40616780 | MS.gene94263:CDS | 40.0% | |
| CAACCCAGACTGAAAATTAG+TGG | - | chr7.3:40615534-40615553 | None:intergenic | 40.0% | |
| CGTATAGGATACTGTGGTTT+CGG | + | chr7.3:40615462-40615481 | MS.gene94263:intron | 40.0% | |
| GAGCGTTTAGATGAGATTAG+GGG | + | chr7.3:40615390-40615409 | MS.gene94263:intron | 40.0% | |
| GGAAAGAAGGAGAATACCAA+AGG | - | chr7.3:40615912-40615931 | None:intergenic | 40.0% | |
| GTTGGGTAATTGTGTGAGTA+TGG | - | chr7.3:40616046-40616065 | None:intergenic | 40.0% | |
| TGATCAAACCCAACCTAAAC+CGG | - | chr7.3:40615426-40615445 | None:intergenic | 40.0% | |
| TGATCCTTACAAAAGAGCCT+TGG | + | chr7.3:40615159-40615178 | MS.gene94263:CDS | 40.0% | |
| TTGGGTCAACTTGAAAACCA+CGG | - | chr7.3:40616105-40616124 | None:intergenic | 40.0% | |
| TTGGGTGGTTGTTGAATTCT+TGG | - | chr7.3:40616755-40616774 | None:intergenic | 40.0% | |
| ! | AAGGAAGAGGTGAAGGTTTT+TGG | + | chr7.3:40614905-40614924 | MS.gene94263:CDS | 40.0% |
| ! | AGTGGGTAAGTGGGTTTATT+GGG | + | chr7.3:40615962-40615981 | MS.gene94263:intron | 40.0% |
| ! | GAGCTTTGTAGAATGCCAAA+AGG | - | chr7.3:40616809-40616828 | None:intergenic | 40.0% |
| ! | GCTCTTTTGTAAGGATCAGA+AGG | - | chr7.3:40615157-40615176 | None:intergenic | 40.0% |
| ! | TAGTGGGTAAGTGGGTTTAT+TGG | + | chr7.3:40615961-40615980 | MS.gene94263:intron | 40.0% |
| ! | TTTTGTTGATATTGCTGCCG+TGG | + | chr7.3:40616641-40616660 | MS.gene94263:CDS | 40.0% |
| !! | AGAACGTGAGAAGAGTATTG+AGG | + | chr7.3:40616548-40616567 | MS.gene94263:CDS | 40.0% |
| !! | CTCAAAAAAGTGGACTGAGT+TGG | - | chr7.3:40616064-40616083 | None:intergenic | 40.0% |
| !!! | GGTGAAGGTTTTTGGAATTG+TGG | + | chr7.3:40614913-40614932 | MS.gene94263:CDS | 40.0% |
| AATGCCAAAAGGGTCTCTCT+TGG | - | chr7.3:40616798-40616817 | None:intergenic | 45.0% | |
| AGACAAATTCTTTGGTGGGG+AGG | + | chr7.3:40616611-40616630 | MS.gene94263:CDS | 45.0% | |
| CTTTAGACCTATTTCCACCC+TGG | - | chr7.3:40614954-40614973 | None:intergenic | 45.0% | |
| TTGGAATTGTGGGAAGTCCA+TGG | + | chr7.3:40614924-40614943 | MS.gene94263:CDS | 45.0% | |
| ! | ATTTTCAGTCTGGGTTGCGT+TGG | + | chr7.3:40615537-40615556 | MS.gene94263:intron | 45.0% |
| ! | CTGCCGTGGTCATATCTTTT+TGG | + | chr7.3:40616655-40616674 | MS.gene94263:CDS | 45.0% |
| ! | GATGAGATTAGGGGTGTATG+CGG | + | chr7.3:40615399-40615418 | MS.gene94263:intron | 45.0% |
| ! | GTTGGCATTAGTGGGTAAGT+GGG | + | chr7.3:40615953-40615972 | MS.gene94263:intron | 45.0% |
| ! | TGTTGGCATTAGTGGGTAAG+TGG | + | chr7.3:40615952-40615971 | MS.gene94263:intron | 45.0% |
| !!! | ATTTTTATTTTTATTTTCAT+AGG | - | chr7.3:40615933-40615952 | None:intergenic | 5.0% |
| AGGATACTGTGGTTTCGGTG+AGG | + | chr7.3:40615467-40615486 | MS.gene94263:intron | 50.0% | |
| ATTGGTCCAGAAACGAGCCA+AGG | - | chr7.3:40615179-40615198 | None:intergenic | 50.0% | |
| ATTTCCACCCTGGTTGACCA+TGG | - | chr7.3:40614944-40614963 | None:intergenic | 50.0% | |
| TGGTCAACCAGGGTGGAAAT+AGG | + | chr7.3:40614944-40614963 | MS.gene94263:CDS | 50.0% | |
| TTCTTTGGTGGGGAGGAGAT+TGG | + | chr7.3:40616618-40616637 | MS.gene94263:CDS | 50.0% | |
| ! | AAAGAGCCTTGGCTCGTTTC+TGG | + | chr7.3:40615170-40615189 | MS.gene94263:CDS | 50.0% |
| ! | CGAGCCAAGGCTCTTTTGTA+AGG | - | chr7.3:40615166-40615185 | None:intergenic | 50.0% |
| ! | TATGCGGACCGGTTTAGGTT+GGG | + | chr7.3:40615415-40615434 | MS.gene94263:intron | 50.0% |
| AAGTCCATGGTCAACCAGGG+TGG | + | chr7.3:40614937-40614956 | MS.gene94263:CDS | 55.0% | |
| GCCAAAAGGGTCTCTCTTGG+AGG | - | chr7.3:40616795-40616814 | None:intergenic | 55.0% | |
| GGGAAGTCCATGGTCAACCA+GGG | + | chr7.3:40614934-40614953 | MS.gene94263:CDS | 55.0% | |
| TGGGAAGTCCATGGTCAACC+AGG | + | chr7.3:40614933-40614952 | MS.gene94263:CDS | 55.0% | |
| ! | GATTAGGGGTGTATGCGGAC+CGG | + | chr7.3:40615404-40615423 | MS.gene94263:intron | 55.0% |
| ! | GCCTCCAAGAGAGACCCTTT+TGG | + | chr7.3:40616791-40616810 | MS.gene94263:CDS | 55.0% |
| ! | GTATGCGGACCGGTTTAGGT+TGG | + | chr7.3:40615414-40615433 | MS.gene94263:intron | 55.0% |
| ! | GGGTGTATGCGGACCGGTTT+AGG | + | chr7.3:40615410-40615429 | MS.gene94263:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 40614893 | 40616857 | 40614893 | ID=MS.gene94263 |
| chr7.3 | mRNA | 40614893 | 40616857 | 40614893 | ID=MS.gene94263.t1;Parent=MS.gene94263 |
| chr7.3 | exon | 40614893 | 40615213 | 40614893 | ID=MS.gene94263.t1.exon1;Parent=MS.gene94263.t1 |
| chr7.3 | CDS | 40614893 | 40615213 | 40614893 | ID=cds.MS.gene94263.t1;Parent=MS.gene94263.t1 |
| chr7.3 | exon | 40616504 | 40616857 | 40616504 | ID=MS.gene94263.t1.exon2;Parent=MS.gene94263.t1 |
| chr7.3 | CDS | 40616504 | 40616857 | 40616504 | ID=cds.MS.gene94263.t1;Parent=MS.gene94263.t1 |
| Gene Sequence |
| Protein sequence |
