Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073565.t1 | XP_013467305.1 | 90.6 | 212 | 17 | 1 | 1 | 209 | 1 | 212 | 2.70E-105 | 391.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073565.t1 | Q9LU63 | 64.0 | 189 | 66 | 2 | 23 | 209 | 32 | 220 | 9.9e-64 | 244.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073565.t1 | A0A072VHS8 | 90.6 | 212 | 17 | 1 | 1 | 209 | 1 | 212 | 2.0e-105 | 391.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene073565 | 0.917304 | 6.25E-86 | -1.69E-46 |
| MS.gene049173 | MS.gene073565 | 0.822618 | 2.15E-53 | -1.69E-46 |
| MS.gene049181 | MS.gene073565 | -0.840567 | 8.04E-58 | -1.69E-46 |
| MS.gene049182 | MS.gene073565 | -0.817991 | 2.47E-52 | -1.69E-46 |
| MS.gene049217 | MS.gene073565 | 0.841103 | 5.82E-58 | -1.69E-46 |
| MS.gene049222 | MS.gene073565 | 0.881461 | 2.35E-70 | -1.69E-46 |
| MS.gene049232 | MS.gene073565 | 0.910407 | 1.94E-82 | -1.69E-46 |
| MS.gene049281 | MS.gene073565 | -0.812683 | 3.75E-51 | -1.69E-46 |
| MS.gene049285 | MS.gene073565 | 0.918301 | 1.84E-86 | -1.69E-46 |
| MS.gene049312 | MS.gene073565 | -0.82233 | 2.51E-53 | -1.69E-46 |
| MS.gene049313 | MS.gene073565 | -0.805178 | 1.51E-49 | -1.69E-46 |
| MS.gene049320 | MS.gene073565 | 0.905222 | 5.39E-80 | -1.69E-46 |
| MS.gene049609 | MS.gene073565 | 0.849178 | 3.82E-60 | -1.69E-46 |
| MS.gene049627 | MS.gene073565 | 0.844429 | 7.60E-59 | -1.69E-46 |
| MS.gene049633 | MS.gene073565 | 0.863286 | 2.77E-64 | -1.69E-46 |
| MS.gene049657 | MS.gene073565 | 0.818712 | 1.70E-52 | -1.69E-46 |
| MS.gene049865 | MS.gene073565 | 0.853445 | 2.38E-61 | -1.69E-46 |
| MS.gene05010 | MS.gene073565 | 0.918285 | 1.88E-86 | -1.69E-46 |
| MS.gene050163 | MS.gene073565 | 0.870791 | 1.12E-66 | -1.69E-46 |
| MS.gene050165 | MS.gene073565 | 0.87568 | 2.55E-68 | -1.69E-46 |
| MS.gene050170 | MS.gene073565 | 0.900631 | 6.04E-78 | -1.69E-46 |
| MS.gene050216 | MS.gene073565 | 0.848564 | 5.66E-60 | -1.69E-46 |
| MS.gene050323 | MS.gene073565 | 0.890945 | 6.22E-74 | -1.69E-46 |
| MS.gene050333 | MS.gene073565 | 0.864392 | 1.26E-64 | -1.69E-46 |
| MS.gene050381 | MS.gene073565 | -0.803735 | 3.03E-49 | -1.69E-46 |
| MS.gene050496 | MS.gene073565 | 0.906947 | 8.60E-81 | -1.69E-46 |
| MS.gene050504 | MS.gene073565 | 0.929665 | 5.01E-93 | -1.69E-46 |
| MS.gene050518 | MS.gene073565 | 0.917261 | 6.58E-86 | -1.69E-46 |
| MS.gene050577 | MS.gene073565 | 0.888991 | 3.61E-73 | -1.69E-46 |
| MS.gene050612 | MS.gene073565 | 0.906659 | 1.17E-80 | -1.69E-46 |
| MS.gene050662 | MS.gene073565 | 0.821451 | 4.01E-53 | -1.69E-46 |
| MS.gene050675 | MS.gene073565 | 0.885713 | 6.41E-72 | -1.69E-46 |
| MS.gene050699 | MS.gene073565 | 0.901468 | 2.60E-78 | -1.69E-46 |
| MS.gene050747 | MS.gene073565 | 0.840074 | 1.08E-57 | -1.69E-46 |
| MS.gene050772 | MS.gene073565 | 0.881895 | 1.64E-70 | -1.69E-46 |
| MS.gene05080 | MS.gene073565 | 0.842069 | 3.24E-58 | -1.69E-46 |
| MS.gene050868 | MS.gene073565 | 0.882568 | 9.34E-71 | -1.69E-46 |
| MS.gene050871 | MS.gene073565 | 0.880111 | 7.18E-70 | -1.69E-46 |
| MS.gene050876 | MS.gene073565 | 0.873415 | 1.50E-67 | -1.69E-46 |
| MS.gene05087 | MS.gene073565 | 0.836817 | 7.49E-57 | -1.69E-46 |
| MS.gene050883 | MS.gene073565 | -0.825582 | 4.33E-54 | -1.69E-46 |
| MS.gene050904 | MS.gene073565 | 0.881549 | 2.19E-70 | -1.69E-46 |
| MS.gene050950 | MS.gene073565 | 0.837132 | 6.22E-57 | -1.69E-46 |
| MS.gene050986 | MS.gene073565 | 0.910498 | 1.75E-82 | -1.69E-46 |
| MS.gene05100 | MS.gene073565 | 0.836339 | 9.92E-57 | -1.69E-46 |
| MS.gene051127 | MS.gene073565 | -0.80461 | 1.99E-49 | -1.69E-46 |
| MS.gene051268 | MS.gene073565 | 0.830098 | 3.56E-55 | -1.69E-46 |
| MS.gene051317 | MS.gene073565 | 0.872454 | 3.14E-67 | -1.69E-46 |
| MS.gene051364 | MS.gene073565 | -0.83282 | 7.60E-56 | -1.69E-46 |
| MS.gene051366 | MS.gene073565 | -0.829658 | 4.55E-55 | -1.69E-46 |
| MS.gene051367 | MS.gene073565 | -0.811843 | 5.71E-51 | -1.69E-46 |
| MS.gene051551 | MS.gene073565 | 0.890413 | 1.01E-73 | -1.69E-46 |
| MS.gene051694 | MS.gene073565 | 0.801154 | 1.03E-48 | -1.69E-46 |
| MS.gene051810 | MS.gene073565 | 0.845987 | 2.88E-59 | -1.69E-46 |
| MS.gene051858 | MS.gene073565 | 0.820937 | 5.27E-53 | -1.69E-46 |
| MS.gene051946 | MS.gene073565 | -0.80707 | 6.05E-50 | -1.69E-46 |
| MS.gene051949 | MS.gene073565 | 0.817231 | 3.67E-52 | -1.69E-46 |
| MS.gene051998 | MS.gene073565 | -0.800185 | 1.62E-48 | -1.69E-46 |
| MS.gene052066 | MS.gene073565 | 0.819817 | 9.52E-53 | -1.69E-46 |
| MS.gene052164 | MS.gene073565 | 0.868812 | 4.94E-66 | -1.69E-46 |
| MS.gene052482 | MS.gene073565 | 0.897942 | 8.61E-77 | -1.69E-46 |
| MS.gene052486 | MS.gene073565 | 0.899724 | 1.49E-77 | -1.69E-46 |
| MS.gene052503 | MS.gene073565 | 0.853137 | 2.91E-61 | -1.69E-46 |
| MS.gene052504 | MS.gene073565 | 0.837395 | 5.33E-57 | -1.69E-46 |
| MS.gene052506 | MS.gene073565 | 0.860044 | 2.72E-63 | -1.69E-46 |
| MS.gene052615 | MS.gene073565 | 0.8189 | 1.54E-52 | -1.69E-46 |
| MS.gene052822 | MS.gene073565 | 0.876171 | 1.73E-68 | -1.69E-46 |
| MS.gene052823 | MS.gene073565 | 0.853948 | 1.70E-61 | -1.69E-46 |
| MS.gene052825 | MS.gene073565 | 0.849407 | 3.30E-60 | -1.69E-46 |
| MS.gene052916 | MS.gene073565 | 0.818272 | 2.14E-52 | -1.69E-46 |
| MS.gene052937 | MS.gene073565 | -0.814163 | 1.77E-51 | -1.69E-46 |
| MS.gene052966 | MS.gene073565 | 0.858455 | 8.14E-63 | -1.69E-46 |
| MS.gene053083 | MS.gene073565 | -0.844216 | 8.67E-59 | -1.69E-46 |
| MS.gene053203 | MS.gene073565 | 0.887408 | 1.46E-72 | -1.69E-46 |
| MS.gene053207 | MS.gene073565 | 0.813476 | 2.51E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene073565 | 0.884639 | 1.61E-71 | -1.69E-46 |
| MS.gene053286 | MS.gene073565 | 0.888698 | 4.69E-73 | -1.69E-46 |
| MS.gene053420 | MS.gene073565 | -0.82475 | 6.82E-54 | -1.69E-46 |
| MS.gene053436 | MS.gene073565 | 0.836419 | 9.46E-57 | -1.69E-46 |
| MS.gene053479 | MS.gene073565 | 0.820797 | 5.67E-53 | -1.69E-46 |
| MS.gene053480 | MS.gene073565 | 0.831109 | 2.01E-55 | -1.69E-46 |
| MS.gene053549 | MS.gene073565 | -0.823112 | 1.65E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene073565 | 0.873074 | 1.95E-67 | -1.69E-46 |
| MS.gene053626 | MS.gene073565 | 0.831045 | 2.08E-55 | -1.69E-46 |
| MS.gene053632 | MS.gene073565 | 0.823797 | 1.14E-53 | -1.69E-46 |
| MS.gene053633 | MS.gene073565 | 0.851502 | 8.51E-61 | -1.69E-46 |
| MS.gene053824 | MS.gene073565 | 0.861381 | 1.07E-63 | -1.69E-46 |
| MS.gene053916 | MS.gene073565 | 0.807158 | 5.79E-50 | -1.69E-46 |
| MS.gene054003 | MS.gene073565 | 0.8247 | 7.00E-54 | -1.69E-46 |
| MS.gene054408 | MS.gene073565 | 0.819498 | 1.13E-52 | -1.69E-46 |
| MS.gene054595 | MS.gene073565 | 0.863805 | 1.91E-64 | -1.69E-46 |
| MS.gene054600 | MS.gene073565 | 0.856297 | 3.54E-62 | -1.69E-46 |
| MS.gene054638 | MS.gene073565 | 0.826517 | 2.60E-54 | -1.69E-46 |
| MS.gene054642 | MS.gene073565 | 0.886409 | 3.51E-72 | -1.69E-46 |
| MS.gene05470 | MS.gene073565 | 0.891145 | 5.19E-74 | -1.69E-46 |
| MS.gene054927 | MS.gene073565 | 0.802903 | 4.50E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene073565 | 0.939299 | 1.60E-99 | -1.69E-46 |
| MS.gene055134 | MS.gene073565 | -0.825948 | 3.55E-54 | -1.69E-46 |
| MS.gene055154 | MS.gene073565 | -0.807978 | 3.88E-50 | -1.69E-46 |
| MS.gene055224 | MS.gene073565 | 0.805103 | 1.57E-49 | -1.69E-46 |
| MS.gene055333 | MS.gene073565 | -0.813175 | 2.92E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene073565 | 0.915987 | 3.06E-85 | -1.69E-46 |
| MS.gene055502 | MS.gene073565 | 0.905844 | 2.79E-80 | -1.69E-46 |
| MS.gene055577 | MS.gene073565 | 0.887852 | 9.91E-73 | -1.69E-46 |
| MS.gene055634 | MS.gene073565 | 0.836665 | 8.19E-57 | -1.69E-46 |
| MS.gene055638 | MS.gene073565 | 0.807483 | 4.94E-50 | -1.69E-46 |
| MS.gene055722 | MS.gene073565 | 0.831954 | 1.25E-55 | -1.69E-46 |
| MS.gene055748 | MS.gene073565 | 0.859884 | 3.04E-63 | -1.69E-46 |
| MS.gene055750 | MS.gene073565 | 0.862102 | 6.43E-64 | -1.69E-46 |
| MS.gene055751 | MS.gene073565 | 0.873489 | 1.41E-67 | -1.69E-46 |
| MS.gene055776 | MS.gene073565 | 0.88944 | 2.42E-73 | -1.69E-46 |
| MS.gene055849 | MS.gene073565 | 0.873096 | 1.92E-67 | -1.69E-46 |
| MS.gene05589 | MS.gene073565 | 0.885584 | 7.17E-72 | -1.69E-46 |
| MS.gene055941 | MS.gene073565 | 0.822399 | 2.42E-53 | -1.69E-46 |
| MS.gene056040 | MS.gene073565 | 0.804539 | 2.06E-49 | -1.69E-46 |
| MS.gene056046 | MS.gene073565 | 0.870649 | 1.24E-66 | -1.69E-46 |
| MS.gene056083 | MS.gene073565 | 0.812445 | 4.22E-51 | -1.69E-46 |
| MS.gene056311 | MS.gene073565 | -0.822739 | 2.02E-53 | -1.69E-46 |
| MS.gene056374 | MS.gene073565 | 0.845835 | 3.17E-59 | -1.69E-46 |
| MS.gene056409 | MS.gene073565 | 0.834732 | 2.53E-56 | -1.69E-46 |
| MS.gene056450 | MS.gene073565 | 0.837151 | 6.16E-57 | -1.69E-46 |
| MS.gene056504 | MS.gene073565 | 0.923288 | 3.24E-89 | -1.69E-46 |
| MS.gene056510 | MS.gene073565 | 0.920187 | 1.76E-87 | -1.69E-46 |
| MS.gene056550 | MS.gene073565 | -0.818094 | 2.34E-52 | -1.69E-46 |
| MS.gene056610 | MS.gene073565 | 0.852232 | 5.28E-61 | -1.69E-46 |
| MS.gene056657 | MS.gene073565 | 0.895932 | 5.99E-76 | -1.69E-46 |
| MS.gene056692 | MS.gene073565 | 0.866975 | 1.92E-65 | -1.69E-46 |
| MS.gene056761 | MS.gene073565 | -0.802496 | 5.46E-49 | -1.69E-46 |
| MS.gene056878 | MS.gene073565 | 0.860302 | 2.27E-63 | -1.69E-46 |
| MS.gene056898 | MS.gene073565 | 0.842996 | 1.84E-58 | -1.69E-46 |
| MS.gene057014 | MS.gene073565 | -0.833636 | 4.76E-56 | -1.69E-46 |
| MS.gene057076 | MS.gene073565 | 0.803349 | 3.64E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene073565 | 0.810114 | 1.35E-50 | -1.69E-46 |
| MS.gene057416 | MS.gene073565 | 0.849474 | 3.16E-60 | -1.69E-46 |
| MS.gene057499 | MS.gene073565 | -0.80195 | 7.07E-49 | -1.69E-46 |
| MS.gene057658 | MS.gene073565 | 0.815549 | 8.73E-52 | -1.69E-46 |
| MS.gene057687 | MS.gene073565 | 0.822619 | 2.15E-53 | -1.69E-46 |
| MS.gene057831 | MS.gene073565 | 0.849839 | 2.50E-60 | -1.69E-46 |
| MS.gene057872 | MS.gene073565 | 0.83762 | 4.67E-57 | -1.69E-46 |
| MS.gene05787 | MS.gene073565 | 0.827085 | 1.90E-54 | -1.69E-46 |
| MS.gene057986 | MS.gene073565 | 0.815648 | 8.30E-52 | -1.69E-46 |
| MS.gene058157 | MS.gene073565 | 0.807918 | 4.00E-50 | -1.69E-46 |
| MS.gene058334 | MS.gene073565 | -0.8629 | 3.65E-64 | -1.69E-46 |
| MS.gene058338 | MS.gene073565 | 0.833198 | 6.12E-56 | -1.69E-46 |
| MS.gene05837 | MS.gene073565 | 0.862861 | 3.76E-64 | -1.69E-46 |
| MS.gene058419 | MS.gene073565 | 0.910802 | 1.25E-82 | -1.69E-46 |
| MS.gene058544 | MS.gene073565 | 0.874446 | 6.71E-68 | -1.69E-46 |
| MS.gene058719 | MS.gene073565 | 0.839888 | 1.21E-57 | -1.69E-46 |
| MS.gene058723 | MS.gene073565 | 0.825012 | 5.91E-54 | -1.69E-46 |
| MS.gene058773 | MS.gene073565 | 0.894065 | 3.50E-75 | -1.69E-46 |
| MS.gene058838 | MS.gene073565 | 0.843917 | 1.04E-58 | -1.69E-46 |
| MS.gene059022 | MS.gene073565 | 0.929051 | 1.21E-92 | -1.69E-46 |
| MS.gene059023 | MS.gene073565 | 0.899322 | 2.22E-77 | -1.69E-46 |
| MS.gene059029 | MS.gene073565 | 0.811949 | 5.42E-51 | -1.69E-46 |
| MS.gene059052 | MS.gene073565 | -0.806877 | 6.64E-50 | -1.69E-46 |
| MS.gene05912 | MS.gene073565 | 0.825211 | 5.30E-54 | -1.69E-46 |
| MS.gene05913 | MS.gene073565 | 0.824192 | 9.22E-54 | -1.69E-46 |
| MS.gene059667 | MS.gene073565 | 0.81499 | 1.16E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene073565 | 0.915553 | 5.13E-85 | -1.69E-46 |
| MS.gene059718 | MS.gene073565 | 0.889403 | 2.50E-73 | -1.69E-46 |
| MS.gene059756 | MS.gene073565 | 0.883321 | 4.95E-71 | -1.69E-46 |
| MS.gene059801 | MS.gene073565 | 0.835698 | 1.44E-56 | -1.69E-46 |
| MS.gene059837 | MS.gene073565 | 0.919058 | 7.23E-87 | -1.69E-46 |
| MS.gene059865 | MS.gene073565 | 0.915954 | 3.18E-85 | -1.69E-46 |
| MS.gene059902 | MS.gene073565 | 0.816996 | 4.15E-52 | -1.69E-46 |
| MS.gene06000 | MS.gene073565 | 0.862848 | 3.79E-64 | -1.69E-46 |
| MS.gene060337 | MS.gene073565 | -0.845776 | 3.29E-59 | -1.69E-46 |
| MS.gene060482 | MS.gene073565 | 0.832847 | 7.48E-56 | -1.69E-46 |
| MS.gene060595 | MS.gene073565 | -0.867866 | 9.98E-66 | -1.69E-46 |
| MS.gene060703 | MS.gene073565 | 0.90255 | 8.65E-79 | -1.69E-46 |
| MS.gene060762 | MS.gene073565 | 0.889921 | 1.57E-73 | -1.69E-46 |
| MS.gene060778 | MS.gene073565 | 0.874553 | 6.17E-68 | -1.69E-46 |
| MS.gene06077 | MS.gene073565 | 0.925799 | 1.12E-90 | -1.69E-46 |
| MS.gene06092 | MS.gene073565 | 0.836669 | 8.17E-57 | -1.69E-46 |
| MS.gene060982 | MS.gene073565 | 0.912778 | 1.32E-83 | -1.69E-46 |
| MS.gene061044 | MS.gene073565 | -0.818813 | 1.61E-52 | -1.69E-46 |
| MS.gene061150 | MS.gene073565 | 0.866899 | 2.03E-65 | -1.69E-46 |
| MS.gene061171 | MS.gene073565 | 0.815268 | 1.01E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073565.t1 | MTR_1g048970 | 90.566 | 212 | 17 | 1 | 1 | 209 | 1 | 212 | 2.95e-143 | 398 |
| MS.gene073565.t1 | MTR_5g019990 | 39.375 | 160 | 86 | 3 | 56 | 205 | 26 | 184 | 3.50e-30 | 110 |
| MS.gene073565.t1 | MTR_5g019990 | 38.235 | 136 | 71 | 4 | 56 | 180 | 26 | 159 | 6.87e-21 | 85.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073565.t1 | AT5G51110 | 68.605 | 172 | 53 | 1 | 39 | 209 | 22 | 193 | 5.83e-87 | 255 |
| MS.gene073565.t1 | AT5G51110 | 64.021 | 189 | 66 | 2 | 23 | 209 | 32 | 220 | 1.90e-85 | 252 |
| MS.gene073565.t1 | AT1G29810 | 38.211 | 123 | 75 | 1 | 85 | 206 | 23 | 145 | 2.13e-28 | 104 |
| MS.gene073565.t1 | AT1G29810 | 38.655 | 119 | 72 | 1 | 89 | 206 | 66 | 184 | 5.22e-28 | 104 |
Find 52 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACGATTTCTTAGGGGATTT+TGG | 0.153548 | 1.1:+33788807 | MS.gene073565:CDS |
| AGAGAAAGAGCAGAGATATT+TGG | 0.213526 | 1.1:-33788918 | None:intergenic |
| TGCTCTTTCTCTTTCTCAAC+AGG | 0.290739 | 1.1:+33788929 | MS.gene073565:CDS |
| GAGAAAGAGCAGAGATATTT+GGG | 0.293549 | 1.1:-33788917 | None:intergenic |
| GCTGAGTTGGAAAGTCAATT+TGG | 0.301133 | 1.1:+33788849 | MS.gene073565:CDS |
| GGTTGTTCTATGTGGATATT+GGG | 0.302096 | 1.1:-33790841 | None:intergenic |
| AGTTCTGCTCTGACTTGATT+TGG | 0.343959 | 1.1:-33790862 | None:intergenic |
| TGGTTGTTCTATGTGGATAT+TGG | 0.345309 | 1.1:-33790842 | None:intergenic |
| AGGGTTGAGTTTGGTGGTGT+TGG | 0.350306 | 1.1:-33788727 | None:intergenic |
| GGGTTGAGTTTGGTGGTGTT+GGG | 0.361314 | 1.1:-33788726 | None:intergenic |
| GAGCAGAGATATTTGGGATA+AGG | 0.364640 | 1.1:-33788911 | None:intergenic |
| GGGGACTGTAAAGGTGAAAT+GGG | 0.394511 | 1.1:-33788960 | None:intergenic |
| ATCAAGTCAGAGCAGAACTA+TGG | 0.396655 | 1.1:+33790866 | MS.gene073565:CDS |
| ATTGAATGAAGGGTTGAGTT+TGG | 0.402466 | 1.1:-33788736 | None:intergenic |
| AATTGACTTTCCAACTCAGC+TGG | 0.437285 | 1.1:-33788846 | None:intergenic |
| CAATTTGGAGAGAAAGTCAT+AGG | 0.449823 | 1.1:+33788864 | MS.gene073565:CDS |
| ATGTTACCTTTCTTATAAGC+TGG | 0.450280 | 1.1:-33789004 | None:intergenic |
| CTTGATTTGGTTGTTCTATG+TGG | 0.454566 | 1.1:-33790849 | None:intergenic |
| TTTCAGAACCGTACTCCAAA+CGG | 0.461066 | 1.1:+33788759 | MS.gene073565:CDS |
| TTCAGAACCGTACTCCAAAC+GGG | 0.462057 | 1.1:+33788760 | MS.gene073565:CDS |
| CGAAGTGGAGAGAACCCGTT+TGG | 0.465122 | 1.1:-33788774 | None:intergenic |
| TGTCCCAAGGAAAAGAGCTT+GGG | 0.472741 | 1.1:+33792110 | MS.gene073565:CDS |
| CTTTCCAACTCAGCTGGGAA+AGG | 0.477753 | 1.1:-33788840 | None:intergenic |
| GGGACTGTAAAGGTGAAATG+GGG | 0.478411 | 1.1:-33788959 | None:intergenic |
| CGGTTCTGAAAATTGAATGA+AGG | 0.495691 | 1.1:-33788747 | None:intergenic |
| GAGAGAACCCGTTTGGAGTA+CGG | 0.497420 | 1.1:-33788767 | None:intergenic |
| TACTTAAACTTCGATGCTTG+TGG | 0.499142 | 1.1:+33790743 | MS.gene073565:CDS |
| TGCTAACCAGCTTATAAGAA+AGG | 0.502324 | 1.1:+33788998 | MS.gene073565:CDS |
| TTGGGATTTATCTGTAACAC+AGG | 0.504575 | 1.1:-33788708 | None:intergenic |
| GGTTAGCATCATCTTGAGAA+AGG | 0.509678 | 1.1:-33788983 | None:intergenic |
| AGACCCTTTCCCAGCTGAGT+TGG | 0.518212 | 1.1:+33788836 | MS.gene073565:CDS |
| TTTCCAACTCAGCTGGGAAA+GGG | 0.519124 | 1.1:-33788839 | None:intergenic |
| GTTAGCATCATCTTGAGAAA+GGG | 0.522512 | 1.1:-33788982 | None:intergenic |
| TTGTCCCAAGGAAAAGAGCT+TGG | 0.523587 | 1.1:+33792109 | MS.gene073565:CDS |
| GGTTCTGAAAATTGAATGAA+GGG | 0.540341 | 1.1:-33788746 | None:intergenic |
| GAAGGATAATAATACAAGCT+TGG | 0.542503 | 1.1:-33788685 | None:intergenic |
| ATTGACTTTCCAACTCAGCT+GGG | 0.553677 | 1.1:-33788845 | None:intergenic |
| GAACTATGGACAACGTCCAT+TGG | 0.571416 | 1.1:+33790880 | MS.gene073565:CDS |
| TGGAGACTTGTGAATGATGA+AGG | 0.574412 | 1.1:+33790718 | MS.gene073565:CDS |
| GAATGAAGGGTTGAGTTTGG+TGG | 0.578352 | 1.1:-33788733 | None:intergenic |
| TCTACGGTTGTAGAGACTGC+AGG | 0.582828 | 1.1:+33790811 | MS.gene073565:CDS |
| ACTCATTAACAGAATCTCTA+CGG | 0.587267 | 1.1:+33790795 | MS.gene073565:CDS |
| GTTGTTCTATGTGGATATTG+GGG | 0.611420 | 1.1:-33790840 | None:intergenic |
| GGACTGTAAAGGTGAAATGG+GGG | 0.615160 | 1.1:-33788958 | None:intergenic |
| AGCATCATCTTGAGAAAGGG+GGG | 0.631020 | 1.1:-33788979 | None:intergenic |
| TTAGCATCATCTTGAGAAAG+GGG | 0.631573 | 1.1:-33788981 | None:intergenic |
| ATTTATCTGTAACACAGGGA+AGG | 0.634474 | 1.1:-33788703 | None:intergenic |
| CAAACGGGTTCTCTCCACTT+CGG | 0.636865 | 1.1:+33788775 | MS.gene073565:CDS |
| TAGCATCATCTTGAGAAAGG+GGG | 0.654155 | 1.1:-33788980 | None:intergenic |
| AGACATCAGATCTTGTCCCA+AGG | 0.671698 | 1.1:+33792097 | MS.gene073565:CDS |
| TGGGATTTATCTGTAACACA+GGG | 0.702359 | 1.1:-33788707 | None:intergenic |
| TCGTTGTTAAAAGACCGAAG+TGG | 0.708298 | 1.1:-33788789 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAAAATTTATATTTGTTTA+TGG | + | chr1.1:33789452-33789471 | MS.gene073565:intron | 10.0% |
| !!! | AAACTTTGTATTTTTAAAAA+TGG | - | chr1.1:33791849-33791868 | None:intergenic | 10.0% |
| !!! | ATTTTTAAAAATGGATTTTT+TGG | - | chr1.1:33791840-33791859 | None:intergenic | 10.0% |
| !!! | CATTTTGTTATAATTTTTTT+TGG | + | chr1.1:33791599-33791618 | MS.gene073565:intron | 10.0% |
| !! | AAAATCAATCAATGATATTA+AGG | - | chr1.1:33791906-33791925 | None:intergenic | 15.0% |
| !! | AAATCAATCAATGATATTAA+GGG | - | chr1.1:33791905-33791924 | None:intergenic | 15.0% |
| !! | TTAAAAAAAGCTATAACAAA+CGG | - | chr1.1:33791454-33791473 | None:intergenic | 15.0% |
| !! | TTAAAAAAAGTTAGAACAAA+CGG | - | chr1.1:33791397-33791416 | None:intergenic | 15.0% |
| !!! | ATAAAAAAGCTATTTCAAAT+AGG | + | chr1.1:33791649-33791668 | MS.gene073565:intron | 15.0% |
| !!! | ATTTTTCTTTTCATTTATGT+AGG | + | chr1.1:33790687-33790706 | MS.gene073565:intron | 15.0% |
| !!! | TAATACAAGTTTCTTTTTTA+AGG | - | chr1.1:33791135-33791154 | None:intergenic | 15.0% |
| !!! | TTATTTTATTTTTGCTTCTA+AGG | - | chr1.1:33790401-33790420 | None:intergenic | 15.0% |
| !!! | TTTTAACAAAGAAATTTTCA+TGG | + | chr1.1:33791513-33791532 | MS.gene073565:intron | 15.0% |
| !!! | TTTTTTAATCTAAAACAAAC+TGG | + | chr1.1:33791879-33791898 | MS.gene073565:intron | 15.0% |
| !!! | TTTTTTTGTAACCATATTAT+TGG | - | chr1.1:33791326-33791345 | None:intergenic | 15.0% |
| !! | AAACTTGTATTACTAATTGT+TGG | + | chr1.1:33791143-33791162 | MS.gene073565:intron | 20.0% |
| !! | AACTAATAACTAAGAATGAT+AGG | - | chr1.1:33790942-33790961 | None:intergenic | 20.0% |
| !! | ACTTTATCCTAAAATTGTAA+TGG | - | chr1.1:33790240-33790259 | None:intergenic | 20.0% |
| !! | ATATCTTTCTACTAAAAAAG+TGG | - | chr1.1:33789177-33789196 | None:intergenic | 20.0% |
| !! | TAAAAAAAGCTATAACAAAC+GGG | - | chr1.1:33791453-33791472 | None:intergenic | 20.0% |
| !! | TAAAAAAAGTTAGAACAAAC+GGG | - | chr1.1:33791396-33791415 | None:intergenic | 20.0% |
| !! | TAAAAGAAAGTTAAGATGAA+TGG | - | chr1.1:33789804-33789823 | None:intergenic | 20.0% |
| !! | TATAAAATAAGTGTCTTCTA+AGG | - | chr1.1:33791107-33791126 | None:intergenic | 20.0% |
| !! | TATACTTTGTACCAATAATA+TGG | + | chr1.1:33791312-33791331 | MS.gene073565:intron | 20.0% |
| !! | TTTCAATATTACATTAACCA+TGG | + | chr1.1:33790999-33791018 | MS.gene073565:intron | 20.0% |
| !!! | AAATTGAGAGATTTTAAATG+CGG | + | chr1.1:33790766-33790785 | MS.gene073565:CDS | 20.0% |
| !!! | AATACTTAGAATGACATTTT+AGG | - | chr1.1:33791575-33791594 | None:intergenic | 20.0% |
| !!! | ATTTTTTTATAGTTGTGTGT+GGG | + | chr1.1:33789354-33789373 | MS.gene073565:intron | 20.0% |
| !!! | TATTTTTTTATAGTTGTGTG+TGG | + | chr1.1:33789353-33789372 | MS.gene073565:intron | 20.0% |
| !!! | TTTGTTACCATTACAATTTT+AGG | + | chr1.1:33790230-33790249 | MS.gene073565:intron | 20.0% |
| !!! | TTTTCATTTATGTAGGTTTT+GGG | + | chr1.1:33790694-33790713 | MS.gene073565:intron | 20.0% |
| !!! | TTTTTCATAAGAACGATTAA+TGG | + | chr1.1:33789270-33789289 | MS.gene073565:intron | 20.0% |
| ! | AAAAGTTTGTATAATCACAG+AGG | + | chr1.1:33791349-33791368 | MS.gene073565:intron | 25.0% |
| ! | AAAGTTTGTATAATCACAGA+GGG | + | chr1.1:33791350-33791369 | MS.gene073565:intron | 25.0% |
| ! | CTAATGAATAGATGACAATA+AGG | - | chr1.1:33790486-33790505 | None:intergenic | 25.0% |
| ! | TAATAACTAAGAATGATAGG+AGG | - | chr1.1:33790939-33790958 | None:intergenic | 25.0% |
| ! | TATTGGTACAAAGTATATAC+CGG | - | chr1.1:33791309-33791328 | None:intergenic | 25.0% |
| ! | TTTGAATGATGCATAAAATC+CGG | + | chr1.1:33790040-33790059 | MS.gene073565:intron | 25.0% |
| !! | ACTAATATTTGGTAACAAAG+TGG | + | chr1.1:33789144-33789163 | MS.gene073565:intron | 25.0% |
| !! | CTTTTAACAACGATTTCTTA+GGG | + | chr1.1:33788799-33788818 | MS.gene073565:CDS | 25.0% |
| !! | CTTTTCATTTATGTAGGTTT+TGG | + | chr1.1:33790693-33790712 | MS.gene073565:intron | 25.0% |
| !! | GAAGTTATTTCAAACTCATT+TGG | - | chr1.1:33791797-33791816 | None:intergenic | 25.0% |
| !! | TAACTTTCTTTTACCAAAAG+AGG | + | chr1.1:33789811-33789830 | MS.gene073565:intron | 25.0% |
| !! | TCTTTTAACAACGATTTCTT+AGG | + | chr1.1:33788798-33788817 | MS.gene073565:CDS | 25.0% |
| !! | TTTTAACAACGATTTCTTAG+GGG | + | chr1.1:33788800-33788819 | MS.gene073565:CDS | 25.0% |
| !!! | TGACTTGGAAGTATATATTT+TGG | - | chr1.1:33789889-33789908 | None:intergenic | 25.0% |
| !!! | TTTTTTTATAGTTGTGTGTG+GGG | + | chr1.1:33789355-33789374 | MS.gene073565:intron | 25.0% |
| AACAAAACAACCACTAACAT+AGG | + | chr1.1:33789696-33789715 | MS.gene073565:intron | 30.0% | |
| ACTCAAAGTCTACAAATTTG+AGG | - | chr1.1:33790323-33790342 | None:intergenic | 30.0% | |
| ACTCATTAACAGAATCTCTA+CGG | + | chr1.1:33790795-33790814 | MS.gene073565:CDS | 30.0% | |
| ATATGAACTATGAACCACTA+AGG | + | chr1.1:33789994-33790013 | MS.gene073565:intron | 30.0% | |
| ATCATAAACAGTACATTCAC+CGG | - | chr1.1:33790062-33790081 | None:intergenic | 30.0% | |
| ATGTTACCTTTCTTATAAGC+TGG | - | chr1.1:33789007-33789026 | None:intergenic | 30.0% | |
| CTATTGACAGTAACTTATTC+AGG | + | chr1.1:33789236-33789255 | MS.gene073565:intron | 30.0% | |
| GAAGGATAATAATACAAGCT+TGG | - | chr1.1:33788688-33788707 | None:intergenic | 30.0% | |
| GCATTAAAATCTCTTTGACT+TGG | - | chr1.1:33789904-33789923 | None:intergenic | 30.0% | |
| TACTAAGAACTTGCAATCAA+TGG | - | chr1.1:33791940-33791959 | None:intergenic | 30.0% | |
| TATAATTACATACTCCACGT+TGG | + | chr1.1:33789550-33789569 | MS.gene073565:intron | 30.0% | |
| TATGAACTATGAACCACTAA+GGG | + | chr1.1:33789995-33790014 | MS.gene073565:intron | 30.0% | |
| TCTCTAAGCAACTATTTACA+CGG | + | chr1.1:33789033-33789052 | MS.gene073565:intron | 30.0% | |
| TGAATAGATGACAATAAGGA+AGG | - | chr1.1:33790482-33790501 | None:intergenic | 30.0% | |
| TGTACATCTACTCTATTGAA+TGG | - | chr1.1:33789948-33789967 | None:intergenic | 30.0% | |
| TGTGTCTAAGTTCATATGTA+TGG | + | chr1.1:33789389-33789408 | MS.gene073565:intron | 30.0% | |
| ! | AAGCTTACATTTTCCTCTTT+TGG | - | chr1.1:33789827-33789846 | None:intergenic | 30.0% |
| ! | AGAAAATTGACTCACTTAAC+TGG | - | chr1.1:33790163-33790182 | None:intergenic | 30.0% |
| ! | GAAAGGCTTCAATATTTTTC+AGG | + | chr1.1:33792024-33792043 | MS.gene073565:intron | 30.0% |
| ! | TTGAAAGCATGACATTTGAA+AGG | + | chr1.1:33792007-33792026 | MS.gene073565:intron | 30.0% |
| !! | ATCTTTTGTTTACGAAAGGA+GGG | + | chr1.1:33789475-33789494 | MS.gene073565:intron | 30.0% |
| !! | ATGGATCTTTTGTTTACGAA+AGG | + | chr1.1:33789471-33789490 | MS.gene073565:intron | 30.0% |
| !! | CAAGATGAGAACTTATTTTC+AGG | - | chr1.1:33791984-33792003 | None:intergenic | 30.0% |
| !! | GATCTAAGTTTAGTTCTACT+TGG | - | chr1.1:33791170-33791189 | None:intergenic | 30.0% |
| !! | GCACATTTGATTTTCAGTTT+TGG | + | chr1.1:33790192-33790211 | MS.gene073565:intron | 30.0% |
| !! | GGTTCTGAAAATTGAATGAA+GGG | - | chr1.1:33788749-33788768 | None:intergenic | 30.0% |
| !! | TTAGTGGTTGTTTTGTTACA+GGG | - | chr1.1:33789693-33789712 | None:intergenic | 30.0% |
| !!! | GGAAGTATATATTTTGGTCA+CGG | - | chr1.1:33789883-33789902 | None:intergenic | 30.0% |
| AAACTTGAGACTTTGCTCAA+GGG | - | chr1.1:33791192-33791211 | None:intergenic | 35.0% | |
| AAGAGTTGAACCTATGTTAG+TGG | - | chr1.1:33789709-33789728 | None:intergenic | 35.0% | |
| ACAGAAGACCACACTAAATA+TGG | + | chr1.1:33791243-33791262 | MS.gene073565:intron | 35.0% | |
| ACTCGCAGATTACTTACAAA+AGG | - | chr1.1:33789745-33789764 | None:intergenic | 35.0% | |
| AGAAGCTAGACTGTGTAAAA+TGG | - | chr1.1:33790662-33790681 | None:intergenic | 35.0% | |
| AGAGAAAGAGCAGAGATATT+TGG | - | chr1.1:33788921-33788940 | None:intergenic | 35.0% | |
| AGAGCAGAGTAGCATAAAAA+TGG | - | chr1.1:33790102-33790121 | None:intergenic | 35.0% | |
| ATAGGAGGAAGAAGATAAGA+AGG | - | chr1.1:33790924-33790943 | None:intergenic | 35.0% | |
| ATTGAATGAAGGGTTGAGTT+TGG | - | chr1.1:33788739-33788758 | None:intergenic | 35.0% | |
| ATTTATCTGTAACACAGGGA+AGG | - | chr1.1:33788706-33788725 | None:intergenic | 35.0% | |
| CAATTTGGAGAGAAAGTCAT+AGG | + | chr1.1:33788864-33788883 | MS.gene073565:CDS | 35.0% | |
| CTCGCAGATTACTTACAAAA+GGG | - | chr1.1:33789744-33789763 | None:intergenic | 35.0% | |
| GAAAATCAAATGTGCATCTG+AGG | - | chr1.1:33790187-33790206 | None:intergenic | 35.0% | |
| GAGAAAGAGCAGAGATATTT+GGG | - | chr1.1:33788920-33788939 | None:intergenic | 35.0% | |
| GATAAATTCAAAGCCCTTAG+TGG | - | chr1.1:33790011-33790030 | None:intergenic | 35.0% | |
| GATTATAATCATCTGCAAGC+CGG | + | chr1.1:33791287-33791306 | MS.gene073565:intron | 35.0% | |
| GGTTAATCTGAATCTACTAG+TGG | + | chr1.1:33789410-33789429 | MS.gene073565:intron | 35.0% | |
| GGTTGTTCTATGTGGATATT+GGG | - | chr1.1:33790844-33790863 | None:intergenic | 35.0% | |
| GTGCTATAAATAGCTGCTTA+TGG | - | chr1.1:33790611-33790630 | None:intergenic | 35.0% | |
| GTTAGCATCATCTTGAGAAA+GGG | - | chr1.1:33788985-33789004 | None:intergenic | 35.0% | |
| GTTGTTCTATGTGGATATTG+GGG | - | chr1.1:33790843-33790862 | None:intergenic | 35.0% | |
| TACTTAAACTTCGATGCTTG+TGG | + | chr1.1:33790743-33790762 | MS.gene073565:CDS | 35.0% | |
| TAGGAGGAAGAAGATAAGAA+GGG | - | chr1.1:33790923-33790942 | None:intergenic | 35.0% | |
| TCTTAATAGTACTCCTTGAG+TGG | - | chr1.1:33789632-33789651 | None:intergenic | 35.0% | |
| TGCTAACCAGCTTATAAGAA+AGG | + | chr1.1:33788998-33789017 | MS.gene073565:CDS | 35.0% | |
| TGGGATTTATCTGTAACACA+GGG | - | chr1.1:33788710-33788729 | None:intergenic | 35.0% | |
| TGGTTGTTCTATGTGGATAT+TGG | - | chr1.1:33790845-33790864 | None:intergenic | 35.0% | |
| TTACATTAACCATGGTGAGA+TGG | + | chr1.1:33791007-33791026 | MS.gene073565:intron | 35.0% | |
| TTACCCTACAAATTTCGTAG+AGG | + | chr1.1:33790635-33790654 | MS.gene073565:intron | 35.0% | |
| TTAGCATCATCTTGAGAAAG+GGG | - | chr1.1:33788984-33789003 | None:intergenic | 35.0% | |
| TTGGGATTTATCTGTAACAC+AGG | - | chr1.1:33788711-33788730 | None:intergenic | 35.0% | |
| ! | AACGATTTCTTAGGGGATTT+TGG | + | chr1.1:33788807-33788826 | MS.gene073565:CDS | 35.0% |
| ! | CTATATTTTACCTTCCAACG+TGG | - | chr1.1:33789567-33789586 | None:intergenic | 35.0% |
| ! | TAAGGAAAGACGCTATTTCA+AGG | - | chr1.1:33790383-33790402 | None:intergenic | 35.0% |
| !! | ACTCAAGGAGTACTATTAAG+AGG | + | chr1.1:33789631-33789650 | MS.gene073565:intron | 35.0% |
| !! | ATAAGAAGGGTACTGGTTTA+AGG | - | chr1.1:33790910-33790929 | None:intergenic | 35.0% |
| !! | CGGTTCTGAAAATTGAATGA+AGG | - | chr1.1:33788750-33788769 | None:intergenic | 35.0% |
| !! | CTTGATTTGGTTGTTCTATG+TGG | - | chr1.1:33790852-33790871 | None:intergenic | 35.0% |
| !! | GATCTTTTGTTTACGAAAGG+AGG | + | chr1.1:33789474-33789493 | MS.gene073565:intron | 35.0% |
| !! | GGGATGAAAGTGTTTGAAAT+AGG | + | chr1.1:33789495-33789514 | MS.gene073565:intron | 35.0% |
| !! | GTTAGTGGTTGTTTTGTTAC+AGG | - | chr1.1:33789694-33789713 | None:intergenic | 35.0% |
| !!! | AGGCTTCAATATTTTTCAGG+TGG | + | chr1.1:33792027-33792046 | MS.gene073565:intron | 35.0% |
| !!! | CATTTATGTAGGTTTTGGGT+TGG | + | chr1.1:33790698-33790717 | MS.gene073565:intron | 35.0% |
| ACATAGGTTCAACTCTTGCT+AGG | + | chr1.1:33789712-33789731 | MS.gene073565:intron | 40.0% | |
| ATCAAGTCAGAGCAGAACTA+TGG | + | chr1.1:33790866-33790885 | MS.gene073565:CDS | 40.0% | |
| ATTACATACTCCACGTTGGA+AGG | + | chr1.1:33789554-33789573 | MS.gene073565:intron | 40.0% | |
| CAGATGATTATAATCTCCGC+CGG | - | chr1.1:33791282-33791301 | None:intergenic | 40.0% | |
| CGGATCATTAACTCAAGTTC+AGG | - | chr1.1:33789863-33789882 | None:intergenic | 40.0% | |
| CGGTGTTCGACACTAATATT+TGG | + | chr1.1:33789133-33789152 | MS.gene073565:intron | 40.0% | |
| GAAACTTGAGACTTTGCTCA+AGG | - | chr1.1:33791193-33791212 | None:intergenic | 40.0% | |
| GCATAGCATATACGTCTTCA+TGG | - | chr1.1:33789926-33789945 | None:intergenic | 40.0% | |
| GGACCTCTACGAAATTTGTA+GGG | - | chr1.1:33790641-33790660 | None:intergenic | 40.0% | |
| GGATAAAGTCTGTTCGATGA+AGG | + | chr1.1:33790251-33790270 | MS.gene073565:intron | 40.0% | |
| GGTTAGCATCATCTTGAGAA+AGG | - | chr1.1:33788986-33789005 | None:intergenic | 40.0% | |
| GTTCTTAGTAGAGCACATCT+AGG | + | chr1.1:33791950-33791969 | MS.gene073565:intron | 40.0% | |
| TAGCATCATCTTGAGAAAGG+GGG | - | chr1.1:33788983-33789002 | None:intergenic | 40.0% | |
| TCGTTGTTAAAAGACCGAAG+TGG | - | chr1.1:33788792-33788811 | None:intergenic | 40.0% | |
| TGCTCTTTCTCTTTCTCAAC+AGG | + | chr1.1:33788929-33788948 | MS.gene073565:CDS | 40.0% | |
| TGGACCTCTACGAAATTTGT+AGG | - | chr1.1:33790642-33790661 | None:intergenic | 40.0% | |
| TGGAGACTTGTGAATGATGA+AGG | + | chr1.1:33790718-33790737 | MS.gene073565:CDS | 40.0% | |
| TGGTGAGATGGACATTGAAA+AGG | + | chr1.1:33791019-33791038 | MS.gene073565:intron | 40.0% | |
| TTAGCTGGCCATATTTAGTG+TGG | - | chr1.1:33791254-33791273 | None:intergenic | 40.0% | |
| TTGAATGTAACCACGTGTGT+CGG | + | chr1.1:33789113-33789132 | MS.gene073565:intron | 40.0% | |
| TTTCAATGTCCATCTCACCA+TGG | - | chr1.1:33791019-33791038 | None:intergenic | 40.0% | |
| TTTCAGAACCGTACTCCAAA+CGG | + | chr1.1:33788759-33788778 | MS.gene073565:CDS | 40.0% | |
| ! | AATTGACTTTCCAACTCAGC+TGG | - | chr1.1:33788849-33788868 | None:intergenic | 40.0% |
| ! | ACTGGTTTAAGGCTTACCAA+TGG | - | chr1.1:33790899-33790918 | None:intergenic | 40.0% |
| ! | AGTTCTGCTCTGACTTGATT+TGG | - | chr1.1:33790865-33790884 | None:intergenic | 40.0% |
| ! | ATATGGCCAGCTAAGTTTTC+CGG | + | chr1.1:33791260-33791279 | MS.gene073565:intron | 40.0% |
| ! | ATTGACTTTCCAACTCAGCT+GGG | - | chr1.1:33788848-33788867 | None:intergenic | 40.0% |
| ! | GAAGAAGATAAGAAGGGTAC+TGG | - | chr1.1:33790917-33790936 | None:intergenic | 40.0% |
| ! | GACGCTATTTCAAGGATACA+TGG | - | chr1.1:33790375-33790394 | None:intergenic | 40.0% |
| ! | GAGCAGAGATATTTGGGATA+AGG | - | chr1.1:33788914-33788933 | None:intergenic | 40.0% |
| ! | GCTGAGTTGGAAAGTCAATT+TGG | + | chr1.1:33788849-33788868 | MS.gene073565:CDS | 40.0% |
| ! | GGAGTACTATTAAGAGGTTC+AGG | + | chr1.1:33789637-33789656 | MS.gene073565:intron | 40.0% |
| ACTCTTCTAAGCCATGACCT+TGG | + | chr1.1:33789765-33789784 | MS.gene073565:intron | 45.0% | |
| AGACATCAGATCTTGTCCCA+AGG | + | chr1.1:33792097-33792116 | MS.gene073565:CDS | 45.0% | |
| AGCATCATCTTGAGAAAGGG+GGG | - | chr1.1:33788982-33789001 | None:intergenic | 45.0% | |
| AGTCTCAAGTTTCTGCCTTG+TGG | + | chr1.1:33791200-33791219 | MS.gene073565:intron | 45.0% | |
| ATGGAAGTGACTCCATTCCA+AGG | - | chr1.1:33789785-33789804 | None:intergenic | 45.0% | |
| CCTTGTGGGTGGAAAAAATG+TGG | + | chr1.1:33791215-33791234 | MS.gene073565:intron | 45.0% | |
| GAACTATGGACAACGTCCAT+TGG | + | chr1.1:33790880-33790899 | MS.gene073565:CDS | 45.0% | |
| GAATGAAGGGTTGAGTTTGG+TGG | - | chr1.1:33788736-33788755 | None:intergenic | 45.0% | |
| GGACTGTAAAGGTGAAATGG+GGG | - | chr1.1:33788961-33788980 | None:intergenic | 45.0% | |
| GGGACTGTAAAGGTGAAATG+GGG | - | chr1.1:33788962-33788981 | None:intergenic | 45.0% | |
| GGGGACTGTAAAGGTGAAAT+GGG | - | chr1.1:33788963-33788982 | None:intergenic | 45.0% | |
| GTCTCAAGTTTCTGCCTTGT+GGG | + | chr1.1:33791201-33791220 | MS.gene073565:intron | 45.0% | |
| TAAAACCCCACCAAGGTTGA+TGG | + | chr1.1:33789595-33789614 | MS.gene073565:intron | 45.0% | |
| TATAGTTGTGTGTGGGGAGA+GGG | + | chr1.1:33789361-33789380 | MS.gene073565:intron | 45.0% | |
| TCTAAGCCATGACCTTGGAA+TGG | + | chr1.1:33789770-33789789 | MS.gene073565:intron | 45.0% | |
| TGTAGCTTAAAACCCCACCA+AGG | + | chr1.1:33789588-33789607 | MS.gene073565:intron | 45.0% | |
| TGTCCCAAGGAAAAGAGCTT+GGG | + | chr1.1:33792110-33792129 | MS.gene073565:CDS | 45.0% | |
| TTATAGTTGTGTGTGGGGAG+AGG | + | chr1.1:33789360-33789379 | MS.gene073565:intron | 45.0% | |
| TTCAGAACCGTACTCCAAAC+GGG | + | chr1.1:33788760-33788779 | MS.gene073565:CDS | 45.0% | |
| TTGTCCCAAGGAAAAGAGCT+TGG | + | chr1.1:33792109-33792128 | MS.gene073565:CDS | 45.0% | |
| TTTCCAACTCAGCTGGGAAA+GGG | - | chr1.1:33788842-33788861 | None:intergenic | 45.0% | |
| ! | AAGCCCAAGCTCTTTTCCTT+GGG | - | chr1.1:33792116-33792135 | None:intergenic | 45.0% |
| ! | TAAGCCCAAGCTCTTTTCCT+TGG | - | chr1.1:33792117-33792136 | None:intergenic | 45.0% |
| !!! | CCACATTTTTTCCACCCACA+AGG | - | chr1.1:33791218-33791237 | None:intergenic | 45.0% |
| !! | AGTTAAAAATTAAAAATAAT+AGG | - | chr1.1:33790436-33790455 | None:intergenic | 5.0% |
| ACTCGTACCATCAACCTTGG+TGG | - | chr1.1:33789605-33789624 | None:intergenic | 50.0% | |
| CCAACTCGTACCATCAACCT+TGG | - | chr1.1:33789608-33789627 | None:intergenic | 50.0% | |
| CTCGTACCATCAACCTTGGT+GGG | - | chr1.1:33789604-33789623 | None:intergenic | 50.0% | |
| CTTTCCAACTCAGCTGGGAA+AGG | - | chr1.1:33788843-33788862 | None:intergenic | 50.0% | |
| GGGGGACTGTAAAGGTGAAA+TGG | - | chr1.1:33788964-33788983 | None:intergenic | 50.0% | |
| GTGACTCCATTCCAAGGTCA+TGG | - | chr1.1:33789779-33789798 | None:intergenic | 50.0% | |
| TCAAGTTTCTGCCTTGTGGG+TGG | + | chr1.1:33791204-33791223 | MS.gene073565:intron | 50.0% | |
| TCGTACCATCAACCTTGGTG+GGG | - | chr1.1:33789603-33789622 | None:intergenic | 50.0% | |
| TCTACGGTTGTAGAGACTGC+AGG | + | chr1.1:33790811-33790830 | MS.gene073565:CDS | 50.0% | |
| TGAGAAAGGGGGGACTGTAA+AGG | - | chr1.1:33788972-33788991 | None:intergenic | 50.0% | |
| ! | CAAACGGGTTCTCTCCACTT+CGG | + | chr1.1:33788775-33788794 | MS.gene073565:CDS | 50.0% |
| ! | GAGAGAACCCGTTTGGAGTA+CGG | - | chr1.1:33788770-33788789 | None:intergenic | 50.0% |
| !! | AGGGTTGAGTTTGGTGGTGT+TGG | - | chr1.1:33788730-33788749 | None:intergenic | 50.0% |
| !! | CCAAGGTTGATGGTACGAGT+TGG | + | chr1.1:33789605-33789624 | MS.gene073565:intron | 50.0% |
| !! | GGGTTGAGTTTGGTGGTGTT+GGG | - | chr1.1:33788729-33788748 | None:intergenic | 50.0% |
| AGACCCTTTCCCAGCTGAGT+TGG | + | chr1.1:33788836-33788855 | MS.gene073565:CDS | 55.0% | |
| CGAAGTGGAGAGAACCCGTT+TGG | - | chr1.1:33788777-33788796 | None:intergenic | 55.0% | |
| TCTCCGCCGGAAAACTTAGC+TGG | - | chr1.1:33791269-33791288 | None:intergenic | 55.0% | |
| ! | GGTACGAGTTGGACCACTCA+AGG | + | chr1.1:33789616-33789635 | MS.gene073565:intron | 55.0% |
| ! | TGGCCAGCTAAGTTTTCCGG+CGG | + | chr1.1:33791263-33791282 | MS.gene073565:intron | 55.0% |
| GTGTCGAACACCGACACACG+TGG | - | chr1.1:33789126-33789145 | None:intergenic | 60.0% | |
| TTGTGTGTGGGGAGAGGGAG+AGG | + | chr1.1:33789366-33789385 | MS.gene073565:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 33788675 | 33792137 | 33788675 | ID=MS.gene073565 |
| chr1.1 | mRNA | 33788675 | 33792137 | 33788675 | ID=MS.gene073565.t1;Parent=MS.gene073565 |
| chr1.1 | exon | 33788675 | 33789019 | 33788675 | ID=MS.gene073565.t1.exon1;Parent=MS.gene073565.t1 |
| chr1.1 | CDS | 33788675 | 33789019 | 33788675 | ID=cds.MS.gene073565.t1;Parent=MS.gene073565.t1 |
| chr1.1 | exon | 33790709 | 33790901 | 33790709 | ID=MS.gene073565.t1.exon2;Parent=MS.gene073565.t1 |
| chr1.1 | CDS | 33790709 | 33790901 | 33790709 | ID=cds.MS.gene073565.t1;Parent=MS.gene073565.t1 |
| chr1.1 | exon | 33792046 | 33792137 | 33792046 | ID=MS.gene073565.t1.exon3;Parent=MS.gene073565.t1 |
| chr1.1 | CDS | 33792046 | 33792137 | 33792046 | ID=cds.MS.gene073565.t1;Parent=MS.gene073565.t1 |
| Gene Sequence |
| Protein sequence |
