Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86145.t1 | RHN50189.1 | 94.9 | 454 | 23 | 0 | 6 | 459 | 4 | 457 | 2.30E-250 | 874.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86145.t1 | Q940Z5 | 35.5 | 473 | 272 | 13 | 8 | 458 | 8 | 469 | 2.1e-74 | 281.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86145.t1 | A0A072U6Q7 | 94.9 | 454 | 23 | 0 | 6 | 459 | 4 | 457 | 1.7e-250 | 874.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene86145 | -0.839342 | 1.68E-57 | -1.69E-46 |
| MS.gene049181 | MS.gene86145 | 0.814037 | 1.89E-51 | -1.69E-46 |
| MS.gene049217 | MS.gene86145 | -0.814235 | 1.71E-51 | -1.69E-46 |
| MS.gene049222 | MS.gene86145 | -0.827038 | 1.95E-54 | -1.69E-46 |
| MS.gene049232 | MS.gene86145 | -0.803724 | 3.04E-49 | -1.69E-46 |
| MS.gene049259 | MS.gene86145 | 0.826056 | 3.34E-54 | -1.69E-46 |
| MS.gene049281 | MS.gene86145 | 0.888093 | 8.01E-73 | -1.69E-46 |
| MS.gene049285 | MS.gene86145 | -0.856082 | 4.09E-62 | -1.69E-46 |
| MS.gene049320 | MS.gene86145 | -0.860924 | 1.47E-63 | -1.69E-46 |
| MS.gene049609 | MS.gene86145 | -0.803171 | 3.96E-49 | -1.69E-46 |
| MS.gene049611 | MS.gene86145 | 0.819148 | 1.35E-52 | -1.69E-46 |
| MS.gene050082 | MS.gene86145 | 0.835198 | 1.93E-56 | -1.69E-46 |
| MS.gene05010 | MS.gene86145 | -0.8218 | 3.33E-53 | -1.69E-46 |
| MS.gene050163 | MS.gene86145 | -0.842297 | 2.82E-58 | -1.69E-46 |
| MS.gene050165 | MS.gene86145 | -0.845597 | 3.68E-59 | -1.69E-46 |
| MS.gene050170 | MS.gene86145 | -0.837606 | 4.71E-57 | -1.69E-46 |
| MS.gene050323 | MS.gene86145 | -0.817634 | 2.98E-52 | -1.69E-46 |
| MS.gene050333 | MS.gene86145 | -0.835559 | 1.56E-56 | -1.69E-46 |
| MS.gene050381 | MS.gene86145 | 0.849245 | 3.66E-60 | -1.69E-46 |
| MS.gene050496 | MS.gene86145 | -0.861611 | 9.08E-64 | -1.69E-46 |
| MS.gene050504 | MS.gene86145 | -0.864608 | 1.08E-64 | -1.69E-46 |
| MS.gene050518 | MS.gene86145 | -0.831471 | 1.64E-55 | -1.69E-46 |
| MS.gene050577 | MS.gene86145 | -0.831745 | 1.40E-55 | -1.69E-46 |
| MS.gene050612 | MS.gene86145 | -0.859776 | 3.27E-63 | -1.69E-46 |
| MS.gene050675 | MS.gene86145 | -0.851134 | 1.08E-60 | -1.69E-46 |
| MS.gene050699 | MS.gene86145 | -0.852431 | 4.64E-61 | -1.69E-46 |
| MS.gene050772 | MS.gene86145 | -0.833112 | 6.43E-56 | -1.69E-46 |
| MS.gene050832 | MS.gene86145 | 0.801445 | 8.98E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene86145 | -0.81774 | 2.82E-52 | -1.69E-46 |
| MS.gene050871 | MS.gene86145 | -0.814985 | 1.17E-51 | -1.69E-46 |
| MS.gene050876 | MS.gene86145 | -0.81082 | 9.53E-51 | -1.69E-46 |
| MS.gene050883 | MS.gene86145 | 0.849308 | 3.52E-60 | -1.69E-46 |
| MS.gene050986 | MS.gene86145 | -0.828979 | 6.65E-55 | -1.69E-46 |
| MS.gene05100 | MS.gene86145 | -0.81535 | 9.67E-52 | -1.69E-46 |
| MS.gene051044 | MS.gene86145 | 0.842357 | 2.72E-58 | -1.69E-46 |
| MS.gene05104 | MS.gene86145 | 0.830681 | 2.56E-55 | -1.69E-46 |
| MS.gene051127 | MS.gene86145 | 0.83112 | 2.00E-55 | -1.69E-46 |
| MS.gene051138 | MS.gene86145 | 0.826394 | 2.78E-54 | -1.69E-46 |
| MS.gene051364 | MS.gene86145 | 0.888582 | 5.20E-73 | -1.69E-46 |
| MS.gene051366 | MS.gene86145 | 0.8757 | 2.51E-68 | -1.69E-46 |
| MS.gene051367 | MS.gene86145 | 0.863729 | 2.02E-64 | -1.69E-46 |
| MS.gene051422 | MS.gene86145 | 0.843597 | 1.27E-58 | -1.69E-46 |
| MS.gene051810 | MS.gene86145 | -0.804244 | 2.37E-49 | -1.69E-46 |
| MS.gene051858 | MS.gene86145 | -0.806079 | 9.79E-50 | -1.69E-46 |
| MS.gene051946 | MS.gene86145 | 0.802456 | 5.56E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene86145 | -0.819737 | 9.92E-53 | -1.69E-46 |
| MS.gene052482 | MS.gene86145 | -0.828134 | 1.06E-54 | -1.69E-46 |
| MS.gene052486 | MS.gene86145 | -0.83606 | 1.17E-56 | -1.69E-46 |
| MS.gene052503 | MS.gene86145 | -0.800253 | 1.57E-48 | -1.69E-46 |
| MS.gene052823 | MS.gene86145 | -0.801462 | 8.90E-49 | -1.69E-46 |
| MS.gene052916 | MS.gene86145 | -0.841104 | 5.82E-58 | -1.69E-46 |
| MS.gene053083 | MS.gene86145 | 0.81327 | 2.79E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene86145 | -0.822006 | 2.98E-53 | -1.69E-46 |
| MS.gene053213 | MS.gene86145 | -0.828504 | 8.67E-55 | -1.69E-46 |
| MS.gene053286 | MS.gene86145 | -0.825063 | 5.75E-54 | -1.69E-46 |
| MS.gene053420 | MS.gene86145 | 0.859316 | 4.50E-63 | -1.69E-46 |
| MS.gene053549 | MS.gene86145 | 0.821211 | 4.55E-53 | -1.69E-46 |
| MS.gene053561 | MS.gene86145 | 0.820346 | 7.20E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene86145 | -0.811935 | 5.46E-51 | -1.69E-46 |
| MS.gene053824 | MS.gene86145 | -0.80204 | 6.77E-49 | -1.69E-46 |
| MS.gene054056 | MS.gene86145 | 0.845506 | 3.89E-59 | -1.69E-46 |
| MS.gene054642 | MS.gene86145 | -0.836568 | 8.67E-57 | -1.69E-46 |
| MS.gene054706 | MS.gene86145 | 0.819724 | 9.99E-53 | -1.69E-46 |
| MS.gene054708 | MS.gene86145 | 0.822414 | 2.40E-53 | -1.69E-46 |
| MS.gene05470 | MS.gene86145 | -0.844282 | 8.32E-59 | -1.69E-46 |
| MS.gene054954 | MS.gene86145 | -0.86847 | 6.38E-66 | -1.69E-46 |
| MS.gene054959 | MS.gene86145 | 0.874132 | 8.57E-68 | -1.69E-46 |
| MS.gene055154 | MS.gene86145 | 0.861122 | 1.28E-63 | -1.69E-46 |
| MS.gene055362 | MS.gene86145 | -0.865554 | 5.43E-65 | -1.69E-46 |
| MS.gene055502 | MS.gene86145 | -0.853469 | 2.34E-61 | -1.69E-46 |
| MS.gene055549 | MS.gene86145 | 0.804212 | 2.41E-49 | -1.69E-46 |
| MS.gene055550 | MS.gene86145 | 0.811205 | 7.87E-51 | -1.69E-46 |
| MS.gene055577 | MS.gene86145 | -0.848211 | 7.08E-60 | -1.69E-46 |
| MS.gene055748 | MS.gene86145 | -0.80676 | 7.03E-50 | -1.69E-46 |
| MS.gene055750 | MS.gene86145 | -0.814353 | 1.61E-51 | -1.69E-46 |
| MS.gene055751 | MS.gene86145 | -0.824259 | 8.89E-54 | -1.69E-46 |
| MS.gene055776 | MS.gene86145 | -0.817459 | 3.26E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene86145 | -0.839801 | 1.27E-57 | -1.69E-46 |
| MS.gene055942 | MS.gene86145 | 0.851788 | 7.06E-61 | -1.69E-46 |
| MS.gene056198 | MS.gene86145 | 0.800716 | 1.27E-48 | -1.69E-46 |
| MS.gene056224 | MS.gene86145 | 0.81011 | 1.36E-50 | -1.69E-46 |
| MS.gene056310 | MS.gene86145 | 0.806124 | 9.58E-50 | -1.69E-46 |
| MS.gene056311 | MS.gene86145 | 0.842552 | 2.41E-58 | -1.69E-46 |
| MS.gene056504 | MS.gene86145 | -0.867737 | 1.10E-65 | -1.69E-46 |
| MS.gene056510 | MS.gene86145 | -0.803583 | 3.25E-49 | -1.69E-46 |
| MS.gene056550 | MS.gene86145 | 0.821296 | 4.35E-53 | -1.69E-46 |
| MS.gene056657 | MS.gene86145 | -0.850114 | 2.09E-60 | -1.69E-46 |
| MS.gene056692 | MS.gene86145 | -0.855643 | 5.50E-62 | -1.69E-46 |
| MS.gene056761 | MS.gene86145 | 0.841092 | 5.86E-58 | -1.69E-46 |
| MS.gene056856 | MS.gene86145 | 0.829707 | 4.43E-55 | -1.69E-46 |
| MS.gene057014 | MS.gene86145 | 0.82526 | 5.16E-54 | -1.69E-46 |
| MS.gene057499 | MS.gene86145 | 0.810394 | 1.18E-50 | -1.69E-46 |
| MS.gene057549 | MS.gene86145 | 0.818641 | 1.76E-52 | -1.69E-46 |
| MS.gene057831 | MS.gene86145 | -0.805308 | 1.42E-49 | -1.69E-46 |
| MS.gene058068 | MS.gene86145 | 0.855684 | 5.35E-62 | -1.69E-46 |
| MS.gene058099 | MS.gene86145 | 0.825284 | 5.10E-54 | -1.69E-46 |
| MS.gene058109 | MS.gene86145 | 0.802382 | 5.76E-49 | -1.69E-46 |
| MS.gene058111 | MS.gene86145 | 0.828043 | 1.12E-54 | -1.69E-46 |
| MS.gene058117 | MS.gene86145 | 0.817886 | 2.61E-52 | -1.69E-46 |
| MS.gene058157 | MS.gene86145 | -0.80393 | 2.76E-49 | -1.69E-46 |
| MS.gene058268 | MS.gene86145 | 0.886839 | 2.41E-72 | -1.69E-46 |
| MS.gene058269 | MS.gene86145 | 0.875827 | 2.27E-68 | -1.69E-46 |
| MS.gene058334 | MS.gene86145 | 0.842479 | 2.52E-58 | -1.69E-46 |
| MS.gene05837 | MS.gene86145 | -0.824654 | 7.18E-54 | -1.69E-46 |
| MS.gene058382 | MS.gene86145 | 0.818075 | 2.37E-52 | -1.69E-46 |
| MS.gene058419 | MS.gene86145 | -0.860882 | 1.51E-63 | -1.69E-46 |
| MS.gene058493 | MS.gene86145 | 0.825924 | 3.60E-54 | -1.69E-46 |
| MS.gene058494 | MS.gene86145 | 0.81735 | 3.45E-52 | -1.69E-46 |
| MS.gene058544 | MS.gene86145 | -0.823942 | 1.06E-53 | -1.69E-46 |
| MS.gene058603 | MS.gene86145 | 0.809931 | 1.48E-50 | -1.69E-46 |
| MS.gene058628 | MS.gene86145 | 0.812738 | 3.65E-51 | -1.69E-46 |
| MS.gene058629 | MS.gene86145 | 0.809734 | 1.63E-50 | -1.69E-46 |
| MS.gene058630 | MS.gene86145 | 0.806887 | 6.61E-50 | -1.69E-46 |
| MS.gene058773 | MS.gene86145 | -0.830157 | 3.44E-55 | -1.69E-46 |
| MS.gene058838 | MS.gene86145 | -0.813564 | 2.40E-51 | -1.69E-46 |
| MS.gene059022 | MS.gene86145 | -0.875037 | 4.22E-68 | -1.69E-46 |
| MS.gene059023 | MS.gene86145 | -0.83536 | 1.76E-56 | -1.69E-46 |
| MS.gene059045 | MS.gene86145 | 0.801686 | 8.01E-49 | -1.69E-46 |
| MS.gene059052 | MS.gene86145 | 0.822394 | 2.42E-53 | -1.69E-46 |
| MS.gene059677 | MS.gene86145 | -0.873322 | 1.61E-67 | -1.69E-46 |
| MS.gene059718 | MS.gene86145 | -0.83978 | 1.29E-57 | -1.69E-46 |
| MS.gene059756 | MS.gene86145 | -0.815812 | 7.63E-52 | -1.69E-46 |
| MS.gene059837 | MS.gene86145 | -0.831491 | 1.62E-55 | -1.69E-46 |
| MS.gene059865 | MS.gene86145 | -0.855101 | 7.91E-62 | -1.69E-46 |
| MS.gene059902 | MS.gene86145 | -0.809039 | 2.30E-50 | -1.69E-46 |
| MS.gene059953 | MS.gene86145 | 0.823129 | 1.64E-53 | -1.69E-46 |
| MS.gene060096 | MS.gene86145 | 0.81462 | 1.40E-51 | -1.69E-46 |
| MS.gene060337 | MS.gene86145 | 0.801228 | 9.94E-49 | -1.69E-46 |
| MS.gene060593 | MS.gene86145 | 0.804669 | 1.93E-49 | -1.69E-46 |
| MS.gene060595 | MS.gene86145 | 0.86965 | 2.64E-66 | -1.69E-46 |
| MS.gene060703 | MS.gene86145 | -0.839992 | 1.14E-57 | -1.69E-46 |
| MS.gene060762 | MS.gene86145 | -0.83634 | 9.91E-57 | -1.69E-46 |
| MS.gene060778 | MS.gene86145 | -0.829439 | 5.15E-55 | -1.69E-46 |
| MS.gene06077 | MS.gene86145 | -0.875819 | 2.28E-68 | -1.69E-46 |
| MS.gene060823 | MS.gene86145 | 0.812075 | 5.09E-51 | -1.69E-46 |
| MS.gene060982 | MS.gene86145 | -0.84241 | 2.63E-58 | -1.69E-46 |
| MS.gene061044 | MS.gene86145 | 0.808546 | 2.94E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene86145 | -0.815072 | 1.11E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86145.t1 | MTR_6g015320 | 94.934 | 454 | 23 | 0 | 6 | 459 | 4 | 457 | 0.0 | 886 |
| MS.gene86145.t1 | MTR_6g015315 | 79.560 | 455 | 86 | 2 | 9 | 459 | 4 | 455 | 0.0 | 715 |
| MS.gene86145.t1 | MTR_6g015310 | 71.067 | 356 | 59 | 2 | 79 | 434 | 22 | 333 | 6.12e-176 | 496 |
| MS.gene86145.t1 | MTR_6g015815 | 54.741 | 464 | 192 | 8 | 8 | 459 | 6 | 463 | 1.07e-169 | 485 |
| MS.gene86145.t1 | MTR_6g015850 | 56.182 | 461 | 185 | 8 | 9 | 459 | 7 | 460 | 5.69e-168 | 481 |
| MS.gene86145.t1 | MTR_6g015830 | 54.095 | 464 | 193 | 9 | 9 | 459 | 7 | 463 | 1.20e-162 | 467 |
| MS.gene86145.t1 | MTR_7g014330 | 46.004 | 463 | 228 | 9 | 11 | 458 | 3 | 458 | 1.13e-139 | 409 |
| MS.gene86145.t1 | MTR_7g014230 | 45.217 | 460 | 230 | 10 | 11 | 455 | 5 | 457 | 1.36e-135 | 398 |
| MS.gene86145.t1 | MTR_7g014250 | 44.060 | 463 | 237 | 10 | 11 | 458 | 3 | 458 | 2.26e-129 | 382 |
| MS.gene86145.t1 | MTR_7g014200 | 41.075 | 465 | 255 | 8 | 8 | 456 | 7 | 468 | 1.43e-112 | 340 |
| MS.gene86145.t1 | MTR_7g014160 | 40.084 | 474 | 250 | 13 | 9 | 456 | 8 | 473 | 1.02e-106 | 325 |
| MS.gene86145.t1 | MTR_7g013850 | 39.381 | 485 | 260 | 9 | 1 | 456 | 1 | 480 | 1.52e-105 | 322 |
| MS.gene86145.t1 | MTR_7g014610 | 38.445 | 476 | 262 | 11 | 9 | 458 | 7 | 477 | 3.96e-102 | 313 |
| MS.gene86145.t1 | MTR_7g014360 | 41.969 | 386 | 200 | 7 | 78 | 458 | 22 | 388 | 7.26e-98 | 299 |
| MS.gene86145.t1 | MTR_7g014620 | 38.377 | 456 | 233 | 10 | 21 | 456 | 5 | 432 | 6.06e-90 | 280 |
| MS.gene86145.t1 | MTR_2g089765 | 32.083 | 480 | 290 | 11 | 7 | 459 | 15 | 485 | 5.34e-70 | 230 |
| MS.gene86145.t1 | MTR_2g089670 | 32.965 | 452 | 266 | 12 | 27 | 456 | 41 | 477 | 8.70e-65 | 216 |
| MS.gene86145.t1 | MTR_3g028210 | 30.498 | 482 | 297 | 11 | 1 | 459 | 1 | 467 | 1.13e-64 | 216 |
| MS.gene86145.t1 | MTR_8g012750 | 32.403 | 466 | 274 | 12 | 25 | 459 | 20 | 475 | 1.44e-64 | 216 |
| MS.gene86145.t1 | MTR_2g089650 | 31.020 | 490 | 283 | 15 | 1 | 459 | 1 | 466 | 1.96e-62 | 210 |
| MS.gene86145.t1 | MTR_7g014630 | 41.155 | 277 | 150 | 7 | 8 | 273 | 7 | 281 | 6.55e-61 | 203 |
| MS.gene86145.t1 | MTR_2g089755 | 31.250 | 464 | 262 | 13 | 31 | 459 | 37 | 478 | 2.15e-58 | 199 |
| MS.gene86145.t1 | MTR_2g089735 | 31.828 | 443 | 258 | 13 | 44 | 459 | 39 | 464 | 9.92e-58 | 197 |
| MS.gene86145.t1 | MTR_3g087640 | 30.169 | 474 | 280 | 15 | 18 | 457 | 17 | 473 | 1.06e-56 | 195 |
| MS.gene86145.t1 | MTR_7g014310 | 38.226 | 327 | 152 | 9 | 116 | 441 | 31 | 308 | 1.79e-55 | 187 |
| MS.gene86145.t1 | MTR_7g015860 | 30.544 | 478 | 266 | 12 | 12 | 452 | 8 | 456 | 2.18e-50 | 178 |
| MS.gene86145.t1 | MTR_7g014180 | 47.399 | 173 | 88 | 2 | 4 | 173 | 1 | 173 | 1.46e-46 | 159 |
| MS.gene86145.t1 | MTR_2g089665 | 29.302 | 430 | 194 | 12 | 13 | 433 | 7 | 335 | 2.83e-39 | 145 |
| MS.gene86145.t1 | MTR_7g014670 | 39.572 | 187 | 102 | 6 | 277 | 457 | 79 | 260 | 1.21e-33 | 127 |
| MS.gene86145.t1 | MTR_3g435300 | 30.258 | 271 | 167 | 7 | 18 | 275 | 11 | 272 | 2.95e-30 | 119 |
| MS.gene86145.t1 | MTR_7g014205 | 38.346 | 133 | 69 | 2 | 292 | 424 | 1 | 120 | 4.98e-23 | 94.4 |
| MS.gene86145.t1 | MTR_2g064495 | 23.278 | 421 | 278 | 15 | 47 | 452 | 39 | 429 | 5.03e-22 | 98.6 |
| MS.gene86145.t1 | MTR_4g007540 | 23.501 | 417 | 275 | 15 | 47 | 448 | 39 | 426 | 5.46e-22 | 98.2 |
| MS.gene86145.t1 | MTR_8g075610 | 23.373 | 415 | 280 | 15 | 47 | 451 | 30 | 416 | 5.91e-22 | 98.2 |
| MS.gene86145.t1 | MTR_2g105330 | 23.040 | 421 | 279 | 15 | 47 | 452 | 39 | 429 | 2.72e-21 | 96.3 |
| MS.gene86145.t1 | MTR_7g014210 | 43.103 | 116 | 63 | 2 | 311 | 425 | 24 | 137 | 3.62e-21 | 90.5 |
| MS.gene86145.t1 | MTR_4g094842 | 25.240 | 313 | 200 | 9 | 145 | 449 | 152 | 438 | 4.11e-19 | 89.7 |
| MS.gene86145.t1 | MTR_3g026310 | 24.784 | 464 | 300 | 17 | 8 | 449 | 2 | 438 | 8.71e-19 | 89.0 |
| MS.gene86145.t1 | MTR_3g098980 | 25.796 | 314 | 204 | 8 | 145 | 453 | 144 | 433 | 1.83e-17 | 84.7 |
| MS.gene86145.t1 | MTR_0190s0020 | 27.673 | 318 | 181 | 12 | 145 | 447 | 147 | 430 | 2.55e-17 | 84.3 |
| MS.gene86145.t1 | MTR_3g088420 | 24.810 | 395 | 252 | 12 | 31 | 411 | 24 | 387 | 3.47e-17 | 84.0 |
| MS.gene86145.t1 | MTR_3g049150 | 24.711 | 433 | 256 | 18 | 64 | 459 | 51 | 450 | 5.63e-17 | 83.6 |
| MS.gene86145.t1 | MTR_4g022825 | 26.449 | 276 | 175 | 9 | 145 | 411 | 138 | 394 | 7.25e-17 | 82.8 |
| MS.gene86145.t1 | MTR_4g094828 | 23.832 | 428 | 270 | 18 | 6 | 411 | 8 | 401 | 9.92e-17 | 82.4 |
| MS.gene86145.t1 | MTR_4g127650 | 22.708 | 480 | 323 | 13 | 1 | 456 | 1 | 456 | 1.46e-16 | 82.0 |
| MS.gene86145.t1 | MTR_4g022800 | 26.786 | 280 | 171 | 11 | 145 | 411 | 138 | 396 | 5.38e-16 | 80.5 |
| MS.gene86145.t1 | MTR_3g026950 | 23.810 | 420 | 271 | 15 | 62 | 452 | 48 | 447 | 4.90e-15 | 77.4 |
| MS.gene86145.t1 | MTR_5g026320 | 26.406 | 409 | 246 | 19 | 43 | 432 | 52 | 424 | 1.01e-14 | 76.6 |
| MS.gene86145.t1 | MTR_7g014340 | 49.275 | 69 | 31 | 2 | 11 | 76 | 3 | 70 | 1.11e-14 | 70.1 |
| MS.gene86145.t1 | MTR_4g022720 | 23.810 | 315 | 203 | 10 | 145 | 449 | 138 | 425 | 1.17e-14 | 76.3 |
| MS.gene86145.t1 | MTR_4g022290 | 22.955 | 440 | 254 | 19 | 6 | 411 | 8 | 396 | 1.31e-14 | 75.9 |
| MS.gene86145.t1 | MTR_7g014220 | 54.839 | 62 | 27 | 1 | 25 | 86 | 12 | 72 | 1.51e-14 | 69.3 |
| MS.gene86145.t1 | MTR_1g053315 | 24.497 | 298 | 196 | 12 | 145 | 433 | 160 | 437 | 4.86e-14 | 74.3 |
| MS.gene86145.t1 | MTR_7g086000 | 19.588 | 485 | 325 | 14 | 9 | 457 | 3 | 458 | 8.77e-14 | 73.6 |
| MS.gene86145.t1 | MTR_7g084910 | 25.602 | 332 | 206 | 12 | 54 | 366 | 48 | 357 | 1.19e-13 | 73.2 |
| MS.gene86145.t1 | MTR_7g085990 | 23.596 | 445 | 287 | 16 | 47 | 459 | 37 | 460 | 1.86e-13 | 72.4 |
| MS.gene86145.t1 | MTR_4g097090 | 22.917 | 480 | 319 | 17 | 4 | 456 | 1 | 456 | 1.93e-13 | 72.4 |
| MS.gene86145.t1 | MTR_7g056087 | 24.383 | 324 | 206 | 11 | 145 | 454 | 139 | 437 | 1.96e-13 | 72.4 |
| MS.gene86145.t1 | MTR_7g084940 | 22.103 | 466 | 299 | 15 | 10 | 452 | 16 | 440 | 6.41e-13 | 70.9 |
| MS.gene86145.t1 | MTR_4g022760 | 23.861 | 373 | 227 | 14 | 23 | 371 | 16 | 355 | 7.14e-13 | 70.5 |
| MS.gene86145.t1 | MTR_8g079710 | 22.750 | 400 | 258 | 14 | 31 | 411 | 29 | 396 | 9.52e-13 | 70.1 |
| MS.gene86145.t1 | MTR_2g089745 | 45.714 | 70 | 38 | 0 | 390 | 459 | 11 | 80 | 1.36e-12 | 63.5 |
| MS.gene86145.t1 | MTR_5g084870 | 23.101 | 316 | 212 | 10 | 142 | 452 | 129 | 418 | 1.92e-12 | 69.3 |
| MS.gene86145.t1 | MTR_8g079970 | 22.348 | 443 | 290 | 17 | 24 | 448 | 14 | 420 | 2.06e-12 | 69.3 |
| MS.gene86145.t1 | MTR_7g085930 | 23.820 | 445 | 286 | 16 | 47 | 459 | 41 | 464 | 3.29e-12 | 68.6 |
| MS.gene86145.t1 | MTR_3g435290 | 32.174 | 115 | 72 | 2 | 345 | 459 | 12 | 120 | 3.89e-12 | 63.5 |
| MS.gene86145.t1 | MTR_4g013050 | 21.359 | 412 | 247 | 11 | 68 | 456 | 53 | 410 | 1.01e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86145.t1 | AT5G39090 | 35.652 | 460 | 275 | 10 | 5 | 457 | 3 | 448 | 3.94e-87 | 274 |
| MS.gene86145.t1 | AT5G39050 | 35.307 | 473 | 271 | 13 | 8 | 457 | 8 | 468 | 2.82e-83 | 264 |
| MS.gene86145.t1 | AT3G29590 | 34.335 | 466 | 268 | 14 | 8 | 457 | 6 | 449 | 1.10e-81 | 259 |
| MS.gene86145.t1 | AT3G29635 | 34.968 | 469 | 270 | 14 | 9 | 457 | 2 | 455 | 8.40e-81 | 258 |
| MS.gene86145.t1 | AT3G29680 | 34.725 | 455 | 278 | 11 | 10 | 457 | 6 | 448 | 1.09e-79 | 254 |
| MS.gene86145.t1 | AT3G29670 | 34.475 | 438 | 266 | 8 | 29 | 458 | 27 | 451 | 6.12e-78 | 250 |
| MS.gene86145.t1 | AT5G39080 | 33.049 | 469 | 276 | 15 | 8 | 452 | 3 | 457 | 5.56e-76 | 245 |
| MS.gene86145.t1 | AT5G61160 | 30.568 | 458 | 295 | 11 | 9 | 454 | 2 | 448 | 4.77e-75 | 243 |
| MS.gene86145.t1 | AT1G03940 | 31.847 | 471 | 283 | 15 | 11 | 457 | 9 | 465 | 7.88e-61 | 206 |
| MS.gene86145.t1 | AT1G03495 | 33.535 | 331 | 192 | 11 | 20 | 332 | 19 | 339 | 4.80e-39 | 144 |
| MS.gene86145.t1 | AT5G23940 | 25.951 | 447 | 272 | 18 | 29 | 446 | 23 | 439 | 4.48e-23 | 102 |
| MS.gene86145.t1 | AT3G29720 | 34.426 | 183 | 109 | 6 | 105 | 283 | 26 | 201 | 3.90e-21 | 92.0 |
| MS.gene86145.t1 | AT5G48930 | 25.223 | 337 | 221 | 11 | 130 | 454 | 115 | 432 | 7.47e-21 | 95.1 |
| MS.gene86145.t1 | AT3G29690 | 31.410 | 156 | 98 | 3 | 304 | 458 | 33 | 180 | 2.49e-20 | 88.6 |
| MS.gene86145.t1 | AT2G19070 | 23.222 | 478 | 306 | 17 | 10 | 456 | 4 | 451 | 1.07e-19 | 91.7 |
| MS.gene86145.t1 | AT3G48720 | 25.293 | 427 | 262 | 18 | 44 | 452 | 41 | 428 | 1.54e-17 | 85.1 |
| MS.gene86145.t1 | AT5G57840 | 22.941 | 340 | 231 | 10 | 131 | 456 | 116 | 438 | 2.17e-14 | 75.5 |
| MS.gene86145.t1 | AT3G26040 | 23.855 | 415 | 237 | 14 | 65 | 450 | 56 | 420 | 4.03e-13 | 71.6 |
| MS.gene86145.t1 | AT5G63560 | 23.034 | 356 | 223 | 13 | 68 | 408 | 61 | 380 | 3.14e-12 | 68.6 |
| MS.gene86145.t1 | AT5G23970 | 22.713 | 317 | 200 | 8 | 145 | 448 | 126 | 410 | 1.61e-11 | 66.6 |
| MS.gene86145.t1 | AT5G38130 | 25.413 | 303 | 196 | 8 | 145 | 441 | 165 | 443 | 2.04e-11 | 66.2 |
| MS.gene86145.t1 | AT5G67160 | 25.524 | 286 | 182 | 8 | 144 | 427 | 139 | 395 | 2.75e-11 | 65.9 |
| MS.gene86145.t1 | AT5G07850 | 23.501 | 417 | 281 | 12 | 47 | 448 | 49 | 442 | 5.11e-11 | 65.1 |
Find 79 sgRNAs with CRISPR-Local
Find 116 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAATTAATGCAAATTATTT+TGG | 0.039056 | 6.3:-9452118 | MS.gene86145:CDS |
| CCAAAATAATTTGCATTAAT+TGG | 0.091109 | 6.3:+9452118 | None:intergenic |
| TGTTAAATGGTTTGGAAAAT+TGG | 0.194705 | 6.3:-9451979 | MS.gene86145:CDS |
| AACAAATAATCGAAGCTTAA+AGG | 0.216613 | 6.3:-9452377 | MS.gene86145:CDS |
| ATTTGACTCAGCTACAATTA+AGG | 0.240047 | 6.3:+9452750 | None:intergenic |
| GGGTTTATTAGTGCTCTTAA+AGG | 0.251648 | 6.3:-9452037 | MS.gene86145:CDS |
| GTGCTTATTTGTTGTCATTA+GGG | 0.252895 | 6.3:-9452216 | MS.gene86145:CDS |
| AAAGAAGTGGTTGATACATT+TGG | 0.269259 | 6.3:+9452910 | None:intergenic |
| AATTGATGTGTTAAATGATT+TGG | 0.271488 | 6.3:-9452011 | MS.gene86145:CDS |
| TGTGCTTATTTGTTGTCATT+AGG | 0.279006 | 6.3:-9452217 | MS.gene86145:CDS |
| TAACTTTCTTTGACACACTA+TGG | 0.279069 | 6.3:-9452975 | MS.gene86145:CDS |
| GTGTTAAATGATTTGGAAAA+TGG | 0.279721 | 6.3:-9452004 | MS.gene86145:CDS |
| ATCTAAGGTTGAAAATAAAA+AGG | 0.282585 | 6.3:-9452260 | MS.gene86145:CDS |
| TTGGAAAATGGTGTGTTAAA+TGG | 0.282675 | 6.3:-9451992 | MS.gene86145:CDS |
| AAAACAGTTAATCCCAAGTT+TGG | 0.285883 | 6.3:-9452680 | MS.gene86145:CDS |
| TCAAGAGAGTGTTTGAGATT+TGG | 0.304260 | 6.3:+9452871 | None:intergenic |
| TTTGTTTGAATTATCACCTT+TGG | 0.324163 | 6.3:-9452311 | MS.gene86145:CDS |
| TTTGACTCAGCTACAATTAA+GGG | 0.333807 | 6.3:+9452751 | None:intergenic |
| TCATGTGAAATTTCCAAACT+TGG | 0.337619 | 6.3:+9452667 | None:intergenic |
| AAGAAGTGGTTGATACATTT+GGG | 0.337994 | 6.3:+9452911 | None:intergenic |
| TAAGAAATATGCACAATCTA+AGG | 0.339968 | 6.3:-9452275 | MS.gene86145:CDS |
| CCTAACCATGGATTTGGTAT+TGG | 0.341869 | 6.3:-9452607 | MS.gene86145:CDS |
| GAAGTAACATCAACTTTCTT+AGG | 0.346906 | 6.3:+9451845 | None:intergenic |
| CAACTTTGTTTATGAATGCT+TGG | 0.362678 | 6.3:-9452546 | MS.gene86145:CDS |
| ATAATCGAAGCTTAAAGGTT+TGG | 0.373753 | 6.3:-9452372 | MS.gene86145:CDS |
| TTCTTGTTGGTAACATCATA+TGG | 0.376227 | 6.3:-9452825 | MS.gene86145:CDS |
| TGAATTTCATTTATTCCTAA+AGG | 0.386899 | 6.3:+9452430 | None:intergenic |
| AACGATGGTGGAATTGAGAT+TGG | 0.388981 | 6.3:-9451779 | MS.gene86145:CDS |
| AAATGGTGTGTTAAATGGTT+TGG | 0.391639 | 6.3:-9451987 | MS.gene86145:CDS |
| CAACACTTCCTCCTTCTTGT+TGG | 0.397153 | 6.3:-9452838 | MS.gene86145:CDS |
| TCCATTATAAAAGACCCTTT+AGG | 0.400364 | 6.3:-9452445 | MS.gene86145:CDS |
| GAATTTCATTTATTCCTAAA+GGG | 0.407307 | 6.3:+9452431 | None:intergenic |
| ACACACCATGCAGCTGTTGA+TGG | 0.410923 | 6.3:-9452577 | MS.gene86145:CDS |
| GTGTTTGAGATTTGGAAGAA+TGG | 0.421678 | 6.3:+9452879 | None:intergenic |
| TAGTGTGTCAAAGAAAGTTA+AGG | 0.428756 | 6.3:+9452978 | None:intergenic |
| GGTTTATTAGTGCTCTTAAA+GGG | 0.434713 | 6.3:-9452036 | MS.gene86145:CDS |
| TACCGGGTCACCTAGGTTTG+AGG | 0.437629 | 6.3:-9451897 | MS.gene86145:CDS |
| ACATAGTTGATGATGGGATA+TGG | 0.453051 | 6.3:+9452790 | None:intergenic |
| GACTTTGAACAAGCAACAAA+TGG | 0.453802 | 6.3:-9451753 | MS.gene86145:CDS |
| CATGTGAAATTTCCAAACTT+GGG | 0.459105 | 6.3:+9452668 | None:intergenic |
| ACTTTGATAGATGTTGTTGA+TGG | 0.460798 | 6.3:+9453054 | None:intergenic |
| AAATAATTTGCATTAATTGG+TGG | 0.462390 | 6.3:+9452121 | None:intergenic |
| CCAATACCAAATCCATGGTT+AGG | 0.462995 | 6.3:+9452607 | None:intergenic |
| AAGTTAAGGGAAAAGTGGTT+GGG | 0.463539 | 6.3:+9452992 | None:intergenic |
| TAGAAGAAAAGACGTTCAAC+TGG | 0.473498 | 6.3:+9452940 | None:intergenic |
| AGTGTGTCAAAGAAAGTTAA+GGG | 0.481845 | 6.3:+9452979 | None:intergenic |
| AAAGAAAGTTAAGGGAAAAG+TGG | 0.493670 | 6.3:+9452987 | None:intergenic |
| ACTAGGGACATAGTTGATGA+TGG | 0.495669 | 6.3:+9452783 | None:intergenic |
| TGCTTATTTGTTGTCATTAG+GGG | 0.498107 | 6.3:-9452215 | MS.gene86145:CDS |
| CTCAGCTACAATTAAGGGAA+TGG | 0.503277 | 6.3:+9452756 | None:intergenic |
| AAATTATACACCTCAAACCT+AGG | 0.524375 | 6.3:+9451887 | None:intergenic |
| TAAGAAAGTTGATGTTACTT+CGG | 0.530062 | 6.3:-9451843 | MS.gene86145:CDS |
| AAAGTTAAGGGAAAAGTGGT+TGG | 0.535581 | 6.3:+9452991 | None:intergenic |
| TAAGGGAAAAGTGGTTGGGG+AGG | 0.538764 | 6.3:+9452996 | None:intergenic |
| TGTTGATTGTAGGTCACGCT+TGG | 0.550010 | 6.3:-9452146 | MS.gene86145:CDS |
| AAAACAATAAGTGCAACAAA+TGG | 0.550059 | 6.3:-9452349 | MS.gene86145:CDS |
| AGTTAAGGGAAAAGTGGTTG+GGG | 0.552744 | 6.3:+9452993 | None:intergenic |
| AGGCATTGTTAGAAGATGGT+GGG | 0.559443 | 6.3:-9452057 | MS.gene86145:CDS |
| CACCTCAAACCTAGGTGACC+CGG | 0.561487 | 6.3:+9451895 | None:intergenic |
| GCAATCTAAAACATCTAGAA+CGG | 0.568645 | 6.3:-9451945 | MS.gene86145:CDS |
| ATTAAGGGAATGGAATCACT+AGG | 0.573426 | 6.3:+9452766 | None:intergenic |
| GAGGCATTGTTAGAAGATGG+TGG | 0.582858 | 6.3:-9452058 | MS.gene86145:CDS |
| CTAGGGACATAGTTGATGAT+GGG | 0.584622 | 6.3:+9452784 | None:intergenic |
| ACAAATGGTGAAGCAGTCAA+AGG | 0.589991 | 6.3:-9452334 | MS.gene86145:CDS |
| TTTGAACAAGCAACAAATGG+AGG | 0.592025 | 6.3:-9451750 | MS.gene86145:CDS |
| AATGGAATCAAAGAAAGAAG+TGG | 0.597523 | 6.3:+9452897 | None:intergenic |
| TTTCTATTACCGGGTCACCT+AGG | 0.609709 | 6.3:-9451904 | MS.gene86145:CDS |
| TTATACCAATACCAAATCCA+TGG | 0.616095 | 6.3:+9452602 | None:intergenic |
| AAGAAAAGACGTTCAACTGG+TGG | 0.617243 | 6.3:+9452943 | None:intergenic |
| GTTACTTCGGTTGATAGACC+AGG | 0.617818 | 6.3:-9451830 | MS.gene86145:CDS |
| GGAAATAGGAATAACGATGG+TGG | 0.624021 | 6.3:-9451791 | MS.gene86145:CDS |
| ACTGAGGCATTGTTAGAAGA+TGG | 0.644512 | 6.3:-9452061 | MS.gene86145:CDS |
| TGATGTTACCAACAAGAAGG+AGG | 0.653468 | 6.3:+9452830 | None:intergenic |
| ATATGATGTTACCAACAAGA+AGG | 0.654769 | 6.3:+9452827 | None:intergenic |
| TTAAGGGAATGGAATCACTA+GGG | 0.654848 | 6.3:+9452767 | None:intergenic |
| ATGGGATATGGTGAATCTTG+TGG | 0.657460 | 6.3:+9452802 | None:intergenic |
| ATTAGTTGAGCATGAAACTG+AGG | 0.666102 | 6.3:-9452077 | MS.gene86145:CDS |
| ATCAACAGCTGCATGGTGTG+TGG | 0.669169 | 6.3:+9452579 | None:intergenic |
| TCAGGAAATAGGAATAACGA+TGG | 0.702069 | 6.3:-9451794 | MS.gene86145:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGAAATTCATTCAAAAAAA+TGG | - | chr6.3:9452358-9452377 | MS.gene86145:CDS | 15.0% |
| !!! | CAATTAATGCAAATTATTTT+GGG | - | chr6.3:9452658-9452677 | MS.gene86145:CDS | 15.0% |
| !!! | TATAAGATTTTTTCTATTAC+CGG | - | chr6.3:9452861-9452880 | MS.gene86145:CDS | 15.0% |
| !! | AATTGATGTGTTAAATGATT+TGG | - | chr6.3:9452764-9452783 | MS.gene86145:CDS | 20.0% |
| !! | GAATTTCATTTATTCCTAAA+GGG | + | chr6.3:9452347-9452366 | None:intergenic | 20.0% |
| !! | TGAATTTCATTTATTCCTAA+AGG | + | chr6.3:9452348-9452367 | None:intergenic | 20.0% |
| !!! | AAATAATTTGCATTAATTGG+TGG | + | chr6.3:9452657-9452676 | None:intergenic | 20.0% |
| !!! | AGGTGTATAATTTTGATTTT+GGG | - | chr6.3:9452898-9452917 | MS.gene86145:CDS | 20.0% |
| !!! | ATAAGATTTTTTCTATTACC+GGG | - | chr6.3:9452862-9452881 | MS.gene86145:CDS | 20.0% |
| !!! | ATCTAAGGTTGAAAATAAAA+AGG | - | chr6.3:9452515-9452534 | MS.gene86145:CDS | 20.0% |
| !!! | CCAAAATAATTTGCATTAAT+TGG | + | chr6.3:9452660-9452679 | None:intergenic | 20.0% |
| !!! | CCAATTAATGCAAATTATTT+TGG | - | chr6.3:9452657-9452676 | MS.gene86145:CDS | 20.0% |
| ! | AAAACAATAAGTGCAACAAA+TGG | - | chr6.3:9452426-9452445 | MS.gene86145:CDS | 25.0% |
| ! | AACAAATAATCGAAGCTTAA+AGG | - | chr6.3:9452398-9452417 | MS.gene86145:CDS | 25.0% |
| ! | TAAGAAATATGCACAATCTA+AGG | - | chr6.3:9452500-9452519 | MS.gene86145:CDS | 25.0% |
| ! | TCAAAAAAATGGATGAATGT+TGG | - | chr6.3:9452369-9452388 | MS.gene86145:CDS | 25.0% |
| ! | TTTGTTTGAATTATCACCTT+TGG | - | chr6.3:9452464-9452483 | MS.gene86145:CDS | 25.0% |
| !! | CTTTTTATCTTTCAGGAAAT+AGG | - | chr6.3:9452970-9452989 | MS.gene86145:CDS | 25.0% |
| !! | GTGTTAAATGATTTGGAAAA+TGG | - | chr6.3:9452771-9452790 | MS.gene86145:CDS | 25.0% |
| !! | TAAAAAGGTTTCAACTTTTG+CGG | - | chr6.3:9452530-9452549 | MS.gene86145:CDS | 25.0% |
| !! | TGTTAAATGGTTTGGAAAAT+TGG | - | chr6.3:9452796-9452815 | MS.gene86145:CDS | 25.0% |
| !! | TTAAGCTTTTGAATATCCAA+AGG | + | chr6.3:9452483-9452502 | None:intergenic | 25.0% |
| !!! | AAAAAAGGTGTTAGATTTTG+AGG | + | chr6.3:9452303-9452322 | None:intergenic | 25.0% |
| !!! | ATAATGGACCTATCAAAAAA+AGG | + | chr6.3:9452318-9452337 | None:intergenic | 25.0% |
| !!! | ATCTAACACCTTTTTTTGAT+AGG | - | chr6.3:9452307-9452326 | MS.gene86145:CDS | 25.0% |
| !!! | ATTTTGAGGTAAAAACATAG+AGG | + | chr6.3:9452289-9452308 | None:intergenic | 25.0% |
| !!! | GAGGTGTATAATTTTGATTT+TGG | - | chr6.3:9452897-9452916 | MS.gene86145:CDS | 25.0% |
| !!! | GTATAATTTTGATTTTGGGT+GGG | - | chr6.3:9452902-9452921 | MS.gene86145:CDS | 25.0% |
| !!! | TAAGAAAGTTGATGTTACTT+CGG | - | chr6.3:9452932-9452951 | MS.gene86145:CDS | 25.0% |
| !!! | TATAATTTTGATTTTGGGTG+GGG | - | chr6.3:9452903-9452922 | MS.gene86145:CDS | 25.0% |
| !!! | TGTATAATTTTGATTTTGGG+TGG | - | chr6.3:9452901-9452920 | MS.gene86145:CDS | 25.0% |
| !!! | TTTTGAGGTAAAAACATAGA+GGG | + | chr6.3:9452288-9452307 | None:intergenic | 25.0% |
| !!! | TTTTTCAACTTCACAAAGAT+TGG | + | chr6.3:9452073-9452092 | None:intergenic | 25.0% |
| AAAAAATGGATGAATGTTGG+TGG | - | chr6.3:9452372-9452391 | MS.gene86145:CDS | 30.0% | |
| AAAAACCAAAAATGCCTTGT+TGG | + | chr6.3:9452607-9452626 | None:intergenic | 30.0% | |
| AAAACAGTTAATCCCAAGTT+TGG | - | chr6.3:9452095-9452114 | MS.gene86145:CDS | 30.0% | |
| AAAGAAAGTTAAGGGAAAAG+TGG | + | chr6.3:9451791-9451810 | None:intergenic | 30.0% | |
| AAATGGTGTGTTAAATGGTT+TGG | - | chr6.3:9452788-9452807 | MS.gene86145:CDS | 30.0% | |
| AAATTATACACCTCAAACCT+AGG | + | chr6.3:9452891-9452910 | None:intergenic | 30.0% | |
| AATGGAATCAAAGAAAGAAG+TGG | + | chr6.3:9451881-9451900 | None:intergenic | 30.0% | |
| ACTTTGATAGATGTTGTTGA+TGG | + | chr6.3:9451724-9451743 | None:intergenic | 30.0% | |
| AGTGTGTCAAAGAAAGTTAA+GGG | + | chr6.3:9451799-9451818 | None:intergenic | 30.0% | |
| ATAATCGAAGCTTAAAGGTT+TGG | - | chr6.3:9452403-9452422 | MS.gene86145:CDS | 30.0% | |
| ATATGATGTTACCAACAAGA+AGG | + | chr6.3:9451951-9451970 | None:intergenic | 30.0% | |
| ATTTGACTCAGCTACAATTA+AGG | + | chr6.3:9452028-9452047 | None:intergenic | 30.0% | |
| CATGTGAAATTTCCAAACTT+GGG | + | chr6.3:9452110-9452129 | None:intergenic | 30.0% | |
| GAAGTAACATCAACTTTCTT+AGG | + | chr6.3:9452933-9452952 | None:intergenic | 30.0% | |
| GGTTTATTAGTGCTCTTAAA+GGG | - | chr6.3:9452739-9452758 | MS.gene86145:CDS | 30.0% | |
| TAACTTTCTTTGACACACTA+TGG | - | chr6.3:9451800-9451819 | MS.gene86145:CDS | 30.0% | |
| TAGTGTGTCAAAGAAAGTTA+AGG | + | chr6.3:9451800-9451819 | None:intergenic | 30.0% | |
| TCATGTGAAATTTCCAAACT+TGG | + | chr6.3:9452111-9452130 | None:intergenic | 30.0% | |
| TCCATTATAAAAGACCCTTT+AGG | - | chr6.3:9452330-9452349 | MS.gene86145:CDS | 30.0% | |
| TTATACCAATACCAAATCCA+TGG | + | chr6.3:9452176-9452195 | None:intergenic | 30.0% | |
| TTGGAAAATGGTGTGTTAAA+TGG | - | chr6.3:9452783-9452802 | MS.gene86145:CDS | 30.0% | |
| TTTGACTCAGCTACAATTAA+GGG | + | chr6.3:9452027-9452046 | None:intergenic | 30.0% | |
| ! | AAAACCAAAAATGCCTTGTT+GGG | + | chr6.3:9452606-9452625 | None:intergenic | 30.0% |
| ! | AAAGAAGTGGTTGATACATT+TGG | + | chr6.3:9451868-9451887 | None:intergenic | 30.0% |
| ! | AAGAAGTGGTTGATACATTT+GGG | + | chr6.3:9451867-9451886 | None:intergenic | 30.0% |
| ! | CAACTTTGTTTATGAATGCT+TGG | - | chr6.3:9452229-9452248 | MS.gene86145:CDS | 30.0% |
| ! | GCAATCTAAAACATCTAGAA+CGG | - | chr6.3:9452830-9452849 | MS.gene86145:CDS | 30.0% |
| ! | TCCTAAAGGGTCTTTTATAA+TGG | + | chr6.3:9452334-9452353 | None:intergenic | 30.0% |
| !! | GTGCTTATTTGTTGTCATTA+GGG | - | chr6.3:9452559-9452578 | MS.gene86145:CDS | 30.0% |
| !! | TGCTTATTTGTTGTCATTAG+GGG | - | chr6.3:9452560-9452579 | MS.gene86145:CDS | 30.0% |
| !! | TGTGCTTATTTGTTGTCATT+AGG | - | chr6.3:9452558-9452577 | MS.gene86145:CDS | 30.0% |
| !! | TTCTTGTTGGTAACATCATA+TGG | - | chr6.3:9451950-9451969 | MS.gene86145:CDS | 30.0% |
| !!! | AACAAGGCATTTTTGGTTTT+TGG | - | chr6.3:9452606-9452625 | MS.gene86145:CDS | 30.0% |
| !!! | TTTTTTCCTAACCATGGATT+TGG | - | chr6.3:9452162-9452181 | MS.gene86145:CDS | 30.0% |
| AAAGTTAAGGGAAAAGTGGT+TGG | + | chr6.3:9451787-9451806 | None:intergenic | 35.0% | |
| AAGTTAAGGGAAAAGTGGTT+GGG | + | chr6.3:9451786-9451805 | None:intergenic | 35.0% | |
| ATTAAGGGAATGGAATCACT+AGG | + | chr6.3:9452012-9452031 | None:intergenic | 35.0% | |
| ATTAGTTGAGCATGAAACTG+AGG | - | chr6.3:9452698-9452717 | MS.gene86145:CDS | 35.0% | |
| GACTTTGAACAAGCAACAAA+TGG | - | chr6.3:9453022-9453041 | MS.gene86145:CDS | 35.0% | |
| GGGTTTATTAGTGCTCTTAA+AGG | - | chr6.3:9452738-9452757 | MS.gene86145:CDS | 35.0% | |
| TAACCAACAAAAACCCAACA+AGG | - | chr6.3:9452590-9452609 | MS.gene86145:CDS | 35.0% | |
| TAGAAGAAAAGACGTTCAAC+TGG | + | chr6.3:9451838-9451857 | None:intergenic | 35.0% | |
| TCAGGAAATAGGAATAACGA+TGG | - | chr6.3:9452981-9453000 | MS.gene86145:CDS | 35.0% | |
| TTAAGGGAATGGAATCACTA+GGG | + | chr6.3:9452011-9452030 | None:intergenic | 35.0% | |
| TTTGAACAAGCAACAAATGG+AGG | - | chr6.3:9453025-9453044 | MS.gene86145:CDS | 35.0% | |
| ! | GTGTTTGAGATTTGGAAGAA+TGG | + | chr6.3:9451899-9451918 | None:intergenic | 35.0% |
| ! | TTTGCTCGACTTTTTGTTCA+AGG | - | chr6.3:9453050-9453069 | MS.gene86145:CDS | 35.0% |
| !! | AAAACCCAACAAGGCATTTT+TGG | - | chr6.3:9452599-9452618 | MS.gene86145:CDS | 35.0% |
| !! | ACATAGTTGATGATGGGATA+TGG | + | chr6.3:9451988-9452007 | None:intergenic | 35.0% |
| !! | TCAAGAGAGTGTTTGAGATT+TGG | + | chr6.3:9451907-9451926 | None:intergenic | 35.0% |
| !!! | GTCACTTTTTTTCCTAACCA+TGG | - | chr6.3:9452156-9452175 | MS.gene86145:CDS | 35.0% |
| !!! | TAGAGGGTGTGTTTTTTTCA+AGG | + | chr6.3:9452272-9452291 | None:intergenic | 35.0% |
| !!! | TGGTTTTTGGTGTTGATTGT+AGG | - | chr6.3:9452619-9452638 | MS.gene86145:CDS | 35.0% |
| AAGAAAAGACGTTCAACTGG+TGG | + | chr6.3:9451835-9451854 | None:intergenic | 40.0% | |
| ACAAATGGTGAAGCAGTCAA+AGG | - | chr6.3:9452441-9452460 | MS.gene86145:CDS | 40.0% | |
| AGTTAAGGGAAAAGTGGTTG+GGG | + | chr6.3:9451785-9451804 | None:intergenic | 40.0% | |
| ATGGGATATGGTGAATCTTG+TGG | + | chr6.3:9451976-9451995 | None:intergenic | 40.0% | |
| CCAATACCAAATCCATGGTT+AGG | + | chr6.3:9452171-9452190 | None:intergenic | 40.0% | |
| CCTGAAAGATAAAAAGCTCC+TGG | + | chr6.3:9452966-9452985 | None:intergenic | 40.0% | |
| CTCAGCTACAATTAAGGGAA+TGG | + | chr6.3:9452022-9452041 | None:intergenic | 40.0% | |
| GGAAATAGGAATAACGATGG+TGG | - | chr6.3:9452984-9453003 | MS.gene86145:CDS | 40.0% | |
| TGATGTTACCAACAAGAAGG+AGG | + | chr6.3:9451948-9451967 | None:intergenic | 40.0% | |
| ! | AGGCATTGTTAGAAGATGGT+GGG | - | chr6.3:9452718-9452737 | MS.gene86145:CDS | 40.0% |
| ! | ATTTTCCATCAACAGCTGCA+TGG | + | chr6.3:9452206-9452225 | None:intergenic | 40.0% |
| ! | CCAGGAGCTTTTTATCTTTC+AGG | - | chr6.3:9452963-9452982 | MS.gene86145:CDS | 40.0% |
| ! | CCTAACCATGGATTTGGTAT+TGG | - | chr6.3:9452168-9452187 | MS.gene86145:CDS | 40.0% |
| !! | AACGATGGTGGAATTGAGAT+TGG | - | chr6.3:9452996-9453015 | MS.gene86145:CDS | 40.0% |
| !! | ACTAGGGACATAGTTGATGA+TGG | + | chr6.3:9451995-9452014 | None:intergenic | 40.0% |
| !! | ACTGAGGCATTGTTAGAAGA+TGG | - | chr6.3:9452714-9452733 | MS.gene86145:CDS | 40.0% |
| !! | ATGCCTTGTTGGGTTTTTGT+TGG | + | chr6.3:9452596-9452615 | None:intergenic | 40.0% |
| !! | CTAGGGACATAGTTGATGAT+GGG | + | chr6.3:9451994-9452013 | None:intergenic | 40.0% |
| !!! | GGGTGTGTTTTTTTCAAGGT+TGG | + | chr6.3:9452268-9452287 | None:intergenic | 40.0% |
| CAACACTTCCTCCTTCTTGT+TGG | - | chr6.3:9451937-9451956 | MS.gene86145:CDS | 45.0% | |
| TTTCTATTACCGGGTCACCT+AGG | - | chr6.3:9452871-9452890 | MS.gene86145:CDS | 45.0% | |
| ! | GTTGGGGAGGTTTCATTTTG+TGG | + | chr6.3:9451769-9451788 | None:intergenic | 45.0% |
| ! | TGTTGATTGTAGGTCACGCT+TGG | - | chr6.3:9452629-9452648 | MS.gene86145:CDS | 45.0% |
| !! | GAGGCATTGTTAGAAGATGG+TGG | - | chr6.3:9452717-9452736 | MS.gene86145:CDS | 45.0% |
| !! | GTTACTTCGGTTGATAGACC+AGG | - | chr6.3:9452945-9452964 | MS.gene86145:CDS | 45.0% |
| ACACACCATGCAGCTGTTGA+TGG | - | chr6.3:9452198-9452217 | MS.gene86145:CDS | 50.0% | |
| ATCAACAGCTGCATGGTGTG+TGG | + | chr6.3:9452199-9452218 | None:intergenic | 50.0% | |
| TAAGGGAAAAGTGGTTGGGG+AGG | + | chr6.3:9451782-9451801 | None:intergenic | 50.0% | |
| CACCTCAAACCTAGGTGACC+CGG | + | chr6.3:9452883-9452902 | None:intergenic | 55.0% | |
| TACCGGGTCACCTAGGTTTG+AGG | - | chr6.3:9452878-9452897 | MS.gene86145:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 9451709 | 9453088 | 9451709 | ID=MS.gene86145 |
| chr6.3 | mRNA | 9451709 | 9453088 | 9451709 | ID=MS.gene86145.t1;Parent=MS.gene86145 |
| chr6.3 | exon | 9451709 | 9453088 | 9451709 | ID=MS.gene86145.t1.exon1;Parent=MS.gene86145.t1 |
| chr6.3 | CDS | 9451709 | 9453088 | 9451709 | ID=cds.MS.gene86145.t1;Parent=MS.gene86145.t1 |
| Gene Sequence |
| Protein sequence |
