Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene92618.t1 | XP_013443349.1 | 96 | 354 | 14 | 0 | 32 | 385 | 103 | 456 | 6.00E-167 | 597 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene92618.t1 | A0A072TIL7 | 96.0 | 354 | 14 | 0 | 32 | 385 | 103 | 456 | 4.3e-167 | 597.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049171 | MS.gene92618 | 0.854976 | 8.60E-62 | -1.69E-46 |
MS.gene049173 | MS.gene92618 | 0.80206 | 6.71E-49 | -1.69E-46 |
MS.gene049217 | MS.gene92618 | 0.831542 | 1.57E-55 | -1.69E-46 |
MS.gene049222 | MS.gene92618 | 0.868402 | 6.71E-66 | -1.69E-46 |
MS.gene049232 | MS.gene92618 | 0.910815 | 1.23E-82 | -1.69E-46 |
MS.gene049285 | MS.gene92618 | 0.866908 | 2.02E-65 | -1.69E-46 |
MS.gene049320 | MS.gene92618 | 0.874893 | 4.73E-68 | -1.69E-46 |
MS.gene049600 | MS.gene92618 | 0.811845 | 5.71E-51 | -1.69E-46 |
MS.gene049609 | MS.gene92618 | 0.821151 | 4.70E-53 | -1.69E-46 |
MS.gene049611 | MS.gene92618 | -0.811501 | 6.79E-51 | -1.69E-46 |
MS.gene049627 | MS.gene92618 | 0.82967 | 4.52E-55 | -1.69E-46 |
MS.gene049633 | MS.gene92618 | 0.845819 | 3.20E-59 | -1.69E-46 |
MS.gene049656 | MS.gene92618 | 0.811407 | 7.11E-51 | -1.69E-46 |
MS.gene049657 | MS.gene92618 | 0.832291 | 1.03E-55 | -1.69E-46 |
MS.gene049865 | MS.gene92618 | 0.853986 | 1.66E-61 | -1.69E-46 |
MS.gene050082 | MS.gene92618 | -0.818725 | 1.69E-52 | -1.69E-46 |
MS.gene05010 | MS.gene92618 | 0.884359 | 2.05E-71 | -1.69E-46 |
MS.gene050163 | MS.gene92618 | 0.84605 | 2.77E-59 | -1.69E-46 |
MS.gene050165 | MS.gene92618 | 0.854418 | 1.25E-61 | -1.69E-46 |
MS.gene050170 | MS.gene92618 | 0.888866 | 4.04E-73 | -1.69E-46 |
MS.gene050216 | MS.gene92618 | 0.866338 | 3.07E-65 | -1.69E-46 |
MS.gene050323 | MS.gene92618 | 0.876253 | 1.62E-68 | -1.69E-46 |
MS.gene050333 | MS.gene92618 | 0.841 | 6.20E-58 | -1.69E-46 |
MS.gene050381 | MS.gene92618 | -0.855228 | 7.26E-62 | -1.69E-46 |
MS.gene050496 | MS.gene92618 | 0.88793 | 9.25E-73 | -1.69E-46 |
MS.gene050499 | MS.gene92618 | 0.814659 | 1.38E-51 | -1.69E-46 |
MS.gene050502 | MS.gene92618 | 0.837337 | 5.52E-57 | -1.69E-46 |
MS.gene050504 | MS.gene92618 | 0.901882 | 1.71E-78 | -1.69E-46 |
MS.gene050518 | MS.gene92618 | 0.888335 | 6.47E-73 | -1.69E-46 |
MS.gene050577 | MS.gene92618 | 0.868489 | 6.29E-66 | -1.69E-46 |
MS.gene050612 | MS.gene92618 | 0.889388 | 2.53E-73 | -1.69E-46 |
MS.gene050647 | MS.gene92618 | -0.81321 | 2.87E-51 | -1.69E-46 |
MS.gene050662 | MS.gene92618 | 0.834697 | 2.58E-56 | -1.69E-46 |
MS.gene050675 | MS.gene92618 | 0.883376 | 4.73E-71 | -1.69E-46 |
MS.gene050697 | MS.gene92618 | 0.814107 | 1.82E-51 | -1.69E-46 |
MS.gene050699 | MS.gene92618 | 0.856704 | 2.69E-62 | -1.69E-46 |
MS.gene050747 | MS.gene92618 | 0.821346 | 4.24E-53 | -1.69E-46 |
MS.gene050772 | MS.gene92618 | 0.84654 | 2.04E-59 | -1.69E-46 |
MS.gene05080 | MS.gene92618 | 0.844188 | 8.83E-59 | -1.69E-46 |
MS.gene050868 | MS.gene92618 | 0.886411 | 3.50E-72 | -1.69E-46 |
MS.gene050871 | MS.gene92618 | 0.888197 | 7.31E-73 | -1.69E-46 |
MS.gene050876 | MS.gene92618 | 0.860956 | 1.44E-63 | -1.69E-46 |
MS.gene05087 | MS.gene92618 | 0.80392 | 2.77E-49 | -1.69E-46 |
MS.gene050883 | MS.gene92618 | -0.825256 | 5.18E-54 | -1.69E-46 |
MS.gene050904 | MS.gene92618 | 0.884672 | 1.57E-71 | -1.69E-46 |
MS.gene050950 | MS.gene92618 | 0.816015 | 6.88E-52 | -1.69E-46 |
MS.gene050986 | MS.gene92618 | 0.888452 | 5.83E-73 | -1.69E-46 |
MS.gene05100 | MS.gene92618 | 0.803526 | 3.34E-49 | -1.69E-46 |
MS.gene051127 | MS.gene92618 | -0.834533 | 2.84E-56 | -1.69E-46 |
MS.gene051138 | MS.gene92618 | -0.810183 | 1.31E-50 | -1.69E-46 |
MS.gene051268 | MS.gene92618 | 0.890173 | 1.25E-73 | -1.69E-46 |
MS.gene051317 | MS.gene92618 | 0.840256 | 9.70E-58 | -1.69E-46 |
MS.gene051364 | MS.gene92618 | -0.816781 | 4.63E-52 | -1.69E-46 |
MS.gene051366 | MS.gene92618 | -0.809115 | 2.22E-50 | -1.69E-46 |
MS.gene051367 | MS.gene92618 | -0.803336 | 3.66E-49 | -1.69E-46 |
MS.gene051509 | MS.gene92618 | 0.859353 | 4.39E-63 | -1.69E-46 |
MS.gene051551 | MS.gene92618 | 0.847913 | 8.56E-60 | -1.69E-46 |
MS.gene051560 | MS.gene92618 | 0.804044 | 2.61E-49 | -1.69E-46 |
MS.gene051564 | MS.gene92618 | 0.804811 | 1.81E-49 | -1.69E-46 |
MS.gene051694 | MS.gene92618 | 0.800042 | 1.73E-48 | -1.69E-46 |
MS.gene051810 | MS.gene92618 | 0.818713 | 1.70E-52 | -1.69E-46 |
MS.gene051858 | MS.gene92618 | 0.804405 | 2.19E-49 | -1.69E-46 |
MS.gene051874 | MS.gene92618 | 0.815018 | 1.15E-51 | -1.69E-46 |
MS.gene051941 | MS.gene92618 | 0.803853 | 2.86E-49 | -1.69E-46 |
MS.gene051946 | MS.gene92618 | -0.833351 | 5.61E-56 | -1.69E-46 |
MS.gene052066 | MS.gene92618 | 0.853696 | 2.01E-61 | -1.69E-46 |
MS.gene052164 | MS.gene92618 | 0.877095 | 8.27E-69 | -1.69E-46 |
MS.gene052482 | MS.gene92618 | 0.892854 | 1.08E-74 | -1.69E-46 |
MS.gene052486 | MS.gene92618 | 0.900763 | 5.29E-78 | -1.69E-46 |
MS.gene052503 | MS.gene92618 | 0.823448 | 1.38E-53 | -1.69E-46 |
MS.gene052506 | MS.gene92618 | 0.808667 | 2.77E-50 | -1.69E-46 |
MS.gene052822 | MS.gene92618 | 0.820522 | 6.56E-53 | -1.69E-46 |
MS.gene052823 | MS.gene92618 | 0.829652 | 4.57E-55 | -1.69E-46 |
MS.gene052825 | MS.gene92618 | 0.821555 | 3.79E-53 | -1.69E-46 |
MS.gene052966 | MS.gene92618 | 0.87517 | 3.80E-68 | -1.69E-46 |
MS.gene053083 | MS.gene92618 | -0.807525 | 4.84E-50 | -1.69E-46 |
MS.gene053203 | MS.gene92618 | 0.855355 | 6.67E-62 | -1.69E-46 |
MS.gene053213 | MS.gene92618 | 0.851479 | 8.64E-61 | -1.69E-46 |
MS.gene053286 | MS.gene92618 | 0.859642 | 3.59E-63 | -1.69E-46 |
MS.gene053420 | MS.gene92618 | -0.871933 | 4.68E-67 | -1.69E-46 |
MS.gene053436 | MS.gene92618 | 0.83448 | 2.93E-56 | -1.69E-46 |
MS.gene053479 | MS.gene92618 | 0.830328 | 3.12E-55 | -1.69E-46 |
MS.gene053480 | MS.gene92618 | 0.801041 | 1.09E-48 | -1.69E-46 |
MS.gene053549 | MS.gene92618 | -0.820762 | 5.78E-53 | -1.69E-46 |
MS.gene053574 | MS.gene92618 | 0.864911 | 8.65E-65 | -1.69E-46 |
MS.gene053626 | MS.gene92618 | 0.857141 | 2.00E-62 | -1.69E-46 |
MS.gene053632 | MS.gene92618 | 0.801205 | 1.01E-48 | -1.69E-46 |
MS.gene053633 | MS.gene92618 | 0.846965 | 1.56E-59 | -1.69E-46 |
MS.gene053824 | MS.gene92618 | 0.83417 | 3.50E-56 | -1.69E-46 |
MS.gene054003 | MS.gene92618 | 0.827739 | 1.32E-54 | -1.69E-46 |
MS.gene054595 | MS.gene92618 | 0.857609 | 1.45E-62 | -1.69E-46 |
MS.gene054600 | MS.gene92618 | 0.83831 | 3.10E-57 | -1.69E-46 |
MS.gene054642 | MS.gene92618 | 0.844577 | 6.94E-59 | -1.69E-46 |
MS.gene054706 | MS.gene92618 | -0.82692 | 2.08E-54 | -1.69E-46 |
MS.gene05470 | MS.gene92618 | 0.866707 | 2.34E-65 | -1.69E-46 |
MS.gene054954 | MS.gene92618 | 0.893554 | 5.64E-75 | -1.69E-46 |
MS.gene055154 | MS.gene92618 | -0.829526 | 4.90E-55 | -1.69E-46 |
MS.gene055202 | MS.gene92618 | -0.846894 | 1.63E-59 | -1.69E-46 |
MS.gene055224 | MS.gene92618 | 0.801443 | 8.98E-49 | -1.69E-46 |
MS.gene055362 | MS.gene92618 | 0.876608 | 1.22E-68 | -1.69E-46 |
MS.gene055502 | MS.gene92618 | 0.870145 | 1.82E-66 | -1.69E-46 |
MS.gene055577 | MS.gene92618 | 0.871089 | 8.91E-67 | -1.69E-46 |
MS.gene055634 | MS.gene92618 | 0.803867 | 2.84E-49 | -1.69E-46 |
MS.gene055722 | MS.gene92618 | 0.815357 | 9.63E-52 | -1.69E-46 |
MS.gene055748 | MS.gene92618 | 0.845015 | 5.28E-59 | -1.69E-46 |
MS.gene055750 | MS.gene92618 | 0.860307 | 2.26E-63 | -1.69E-46 |
MS.gene055751 | MS.gene92618 | 0.85921 | 4.84E-63 | -1.69E-46 |
MS.gene055776 | MS.gene92618 | 0.866224 | 3.33E-65 | -1.69E-46 |
MS.gene055849 | MS.gene92618 | 0.825126 | 5.56E-54 | -1.69E-46 |
MS.gene05589 | MS.gene92618 | 0.894986 | 1.47E-75 | -1.69E-46 |
MS.gene055941 | MS.gene92618 | 0.818364 | 2.04E-52 | -1.69E-46 |
MS.gene056040 | MS.gene92618 | 0.821803 | 3.32E-53 | -1.69E-46 |
MS.gene056046 | MS.gene92618 | 0.850612 | 1.52E-60 | -1.69E-46 |
MS.gene056166 | MS.gene92618 | 0.81861 | 1.79E-52 | -1.69E-46 |
MS.gene056310 | MS.gene92618 | -0.828653 | 7.98E-55 | -1.69E-46 |
MS.gene056311 | MS.gene92618 | -0.838484 | 2.80E-57 | -1.69E-46 |
MS.gene056374 | MS.gene92618 | 0.8025 | 5.45E-49 | -1.69E-46 |
MS.gene056387 | MS.gene92618 | 0.832487 | 9.19E-56 | -1.69E-46 |
MS.gene056409 | MS.gene92618 | 0.812389 | 4.35E-51 | -1.69E-46 |
MS.gene056446 | MS.gene92618 | 0.810805 | 9.60E-51 | -1.69E-46 |
MS.gene056450 | MS.gene92618 | 0.859004 | 5.58E-63 | -1.69E-46 |
MS.gene056504 | MS.gene92618 | 0.920693 | 9.26E-88 | -1.69E-46 |
MS.gene056510 | MS.gene92618 | 0.890717 | 7.65E-74 | -1.69E-46 |
MS.gene056549 | MS.gene92618 | 0.80966 | 1.70E-50 | -1.69E-46 |
MS.gene056550 | MS.gene92618 | -0.807846 | 4.14E-50 | -1.69E-46 |
MS.gene056610 | MS.gene92618 | 0.812676 | 3.76E-51 | -1.69E-46 |
MS.gene056657 | MS.gene92618 | 0.868703 | 5.36E-66 | -1.69E-46 |
MS.gene056692 | MS.gene92618 | 0.841659 | 4.16E-58 | -1.69E-46 |
MS.gene056878 | MS.gene92618 | 0.845997 | 2.86E-59 | -1.69E-46 |
MS.gene057014 | MS.gene92618 | -0.843156 | 1.67E-58 | -1.69E-46 |
MS.gene057086 | MS.gene92618 | 0.81853 | 1.87E-52 | -1.69E-46 |
MS.gene057473 | MS.gene92618 | -0.803571 | 3.27E-49 | -1.69E-46 |
MS.gene057687 | MS.gene92618 | 0.862074 | 6.55E-64 | -1.69E-46 |
MS.gene057831 | MS.gene92618 | 0.858505 | 7.87E-63 | -1.69E-46 |
MS.gene057857 | MS.gene92618 | 0.805219 | 1.48E-49 | -1.69E-46 |
MS.gene057872 | MS.gene92618 | 0.872699 | 2.60E-67 | -1.69E-46 |
MS.gene05787 | MS.gene92618 | 0.858689 | 6.94E-63 | -1.69E-46 |
MS.gene058111 | MS.gene92618 | -0.810004 | 1.43E-50 | -1.69E-46 |
MS.gene058130 | MS.gene92618 | 0.803648 | 3.15E-49 | -1.69E-46 |
MS.gene058157 | MS.gene92618 | 0.855557 | 5.83E-62 | -1.69E-46 |
MS.gene058171 | MS.gene92618 | -0.847025 | 1.50E-59 | -1.69E-46 |
MS.gene058173 | MS.gene92618 | -0.840985 | 6.25E-58 | -1.69E-46 |
MS.gene058175 | MS.gene92618 | -0.848969 | 4.37E-60 | -1.69E-46 |
MS.gene058183 | MS.gene92618 | 0.807197 | 5.69E-50 | -1.69E-46 |
MS.gene058268 | MS.gene92618 | -0.817216 | 3.70E-52 | -1.69E-46 |
MS.gene058269 | MS.gene92618 | -0.813431 | 2.57E-51 | -1.69E-46 |
MS.gene058334 | MS.gene92618 | -0.837582 | 4.77E-57 | -1.69E-46 |
MS.gene058335 | MS.gene92618 | 0.810726 | 9.99E-51 | -1.69E-46 |
MS.gene058338 | MS.gene92618 | 0.810578 | 1.08E-50 | -1.69E-46 |
MS.gene05837 | MS.gene92618 | 0.858269 | 9.25E-63 | -1.69E-46 |
MS.gene058419 | MS.gene92618 | 0.863586 | 2.24E-64 | -1.69E-46 |
MS.gene058493 | MS.gene92618 | -0.812079 | 5.08E-51 | -1.69E-46 |
MS.gene058494 | MS.gene92618 | -0.824536 | 7.65E-54 | -1.69E-46 |
MS.gene058544 | MS.gene92618 | 0.831621 | 1.51E-55 | -1.69E-46 |
MS.gene058719 | MS.gene92618 | 0.831805 | 1.36E-55 | -1.69E-46 |
MS.gene058773 | MS.gene92618 | 0.874505 | 6.41E-68 | -1.69E-46 |
MS.gene058838 | MS.gene92618 | 0.809258 | 2.07E-50 | -1.69E-46 |
MS.gene058978 | MS.gene92618 | -0.805484 | 1.31E-49 | -1.69E-46 |
MS.gene059022 | MS.gene92618 | 0.893361 | 6.76E-75 | -1.69E-46 |
MS.gene059023 | MS.gene92618 | 0.854957 | 8.71E-62 | -1.69E-46 |
MS.gene059034 | MS.gene92618 | 0.801365 | 9.32E-49 | -1.69E-46 |
MS.gene059045 | MS.gene92618 | -0.82871 | 7.73E-55 | -1.69E-46 |
MS.gene059052 | MS.gene92618 | -0.802073 | 6.67E-49 | -1.69E-46 |
MS.gene05912 | MS.gene92618 | 0.825168 | 5.43E-54 | -1.69E-46 |
MS.gene05913 | MS.gene92618 | 0.837972 | 3.79E-57 | -1.69E-46 |
MS.gene059367 | MS.gene92618 | 0.85473 | 1.01E-61 | -1.69E-46 |
MS.gene059526 | MS.gene92618 | -0.808477 | 3.04E-50 | -1.69E-46 |
MS.gene059667 | MS.gene92618 | 0.838937 | 2.14E-57 | -1.69E-46 |
MS.gene059677 | MS.gene92618 | 0.869588 | 2.77E-66 | -1.69E-46 |
MS.gene059680 | MS.gene92618 | 0.80649 | 8.02E-50 | -1.69E-46 |
MS.gene059718 | MS.gene92618 | 0.86218 | 6.08E-64 | -1.69E-46 |
MS.gene059756 | MS.gene92618 | 0.827853 | 1.24E-54 | -1.69E-46 |
MS.gene059801 | MS.gene92618 | 0.83439 | 3.08E-56 | -1.69E-46 |
MS.gene059837 | MS.gene92618 | 0.876436 | 1.40E-68 | -1.69E-46 |
MS.gene059865 | MS.gene92618 | 0.916255 | 2.22E-85 | -1.69E-46 |
MS.gene06000 | MS.gene92618 | 0.881957 | 1.56E-70 | -1.69E-46 |
MS.gene060187 | MS.gene92618 | -0.84017 | 1.02E-57 | -1.69E-46 |
MS.gene060295 | MS.gene92618 | 0.802183 | 6.33E-49 | -1.69E-46 |
MS.gene060482 | MS.gene92618 | 0.842386 | 2.67E-58 | -1.69E-46 |
MS.gene060593 | MS.gene92618 | -0.828461 | 8.88E-55 | -1.69E-46 |
MS.gene060595 | MS.gene92618 | -0.907497 | 4.76E-81 | -1.69E-46 |
MS.gene060703 | MS.gene92618 | 0.880673 | 4.52E-70 | -1.69E-46 |
MS.gene060762 | MS.gene92618 | 0.886348 | 3.70E-72 | -1.69E-46 |
MS.gene060778 | MS.gene92618 | 0.898604 | 4.51E-77 | -1.69E-46 |
MS.gene06077 | MS.gene92618 | 0.90195 | 1.59E-78 | -1.69E-46 |
MS.gene060823 | MS.gene92618 | -0.808584 | 2.88E-50 | -1.69E-46 |
MS.gene06097 | MS.gene92618 | 0.818782 | 1.64E-52 | -1.69E-46 |
MS.gene060982 | MS.gene92618 | 0.904493 | 1.16E-79 | -1.69E-46 |
MS.gene061044 | MS.gene92618 | -0.810711 | 1.01E-50 | -1.69E-46 |
MS.gene061134 | MS.gene92618 | 0.825542 | 4.43E-54 | -1.69E-46 |
MS.gene061150 | MS.gene92618 | 0.812836 | 3.47E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene92618.t1 | MTR_0019s0070 | 95.095 | 367 | 18 | 0 | 19 | 385 | 90 | 456 | 0.0 | 716 |
MS.gene92618.t1 | MTR_1g101330 | 67.742 | 372 | 91 | 11 | 19 | 385 | 94 | 441 | 4.91e-154 | 441 |
MS.gene92618.t1 | MTR_4g102840 | 38.810 | 353 | 185 | 8 | 48 | 385 | 90 | 426 | 5.95e-58 | 195 |
MS.gene92618.t1 | MTR_1g103070 | 34.877 | 324 | 141 | 11 | 36 | 350 | 124 | 386 | 9.17e-34 | 130 |
MS.gene92618.t1 | MTR_1g041430 | 34.161 | 322 | 143 | 11 | 38 | 350 | 104 | 365 | 9.38e-28 | 114 |
MS.gene92618.t1 | MTR_8g024540 | 32.865 | 356 | 172 | 11 | 48 | 343 | 129 | 477 | 1.47e-26 | 111 |
MS.gene92618.t1 | MTR_8g014580 | 33.333 | 300 | 152 | 5 | 43 | 340 | 123 | 376 | 1.61e-26 | 110 |
MS.gene92618.t1 | MTR_8g102400 | 32.039 | 309 | 137 | 13 | 48 | 337 | 114 | 368 | 1.50e-20 | 93.2 |
MS.gene92618.t1 | MTR_7g114870 | 58.333 | 72 | 30 | 0 | 48 | 119 | 108 | 179 | 2.23e-19 | 89.4 |
MS.gene92618.t1 | MTR_1g095740 | 52.439 | 82 | 38 | 1 | 41 | 122 | 137 | 217 | 2.07e-18 | 87.0 |
MS.gene92618.t1 | MTR_0047s0040 | 49.351 | 77 | 37 | 1 | 35 | 111 | 92 | 166 | 5.75e-17 | 82.4 |
MS.gene92618.t1 | MTR_4g087420 | 45.333 | 75 | 41 | 0 | 48 | 122 | 148 | 222 | 1.37e-16 | 81.6 |
MS.gene92618.t1 | MTR_4g050480 | 68.421 | 57 | 18 | 0 | 41 | 97 | 91 | 147 | 2.39e-16 | 80.5 |
MS.gene92618.t1 | MTR_4g050480 | 68.421 | 57 | 18 | 0 | 41 | 97 | 92 | 148 | 2.53e-16 | 80.5 |
MS.gene92618.t1 | MTR_2g100740 | 56.000 | 75 | 30 | 1 | 37 | 108 | 85 | 159 | 3.77e-16 | 79.3 |
MS.gene92618.t1 | MTR_4g108140 | 53.731 | 67 | 31 | 0 | 47 | 113 | 100 | 166 | 6.22e-16 | 79.7 |
MS.gene92618.t1 | MTR_4g108140 | 53.731 | 67 | 31 | 0 | 47 | 113 | 101 | 167 | 6.46e-16 | 79.7 |
MS.gene92618.t1 | MTR_8g074730 | 60.000 | 65 | 26 | 0 | 42 | 106 | 67 | 131 | 9.54e-16 | 73.9 |
MS.gene92618.t1 | MTR_7g114700 | 45.205 | 73 | 40 | 0 | 41 | 113 | 130 | 202 | 1.76e-14 | 75.1 |
MS.gene92618.t1 | MTR_1g007920 | 65.000 | 60 | 21 | 0 | 38 | 97 | 114 | 173 | 3.26e-14 | 74.3 |
MS.gene92618.t1 | MTR_1g007920 | 65.000 | 60 | 21 | 0 | 38 | 97 | 89 | 148 | 3.81e-14 | 73.9 |
MS.gene92618.t1 | MTR_3g104570 | 61.404 | 57 | 22 | 0 | 41 | 97 | 86 | 142 | 1.60e-13 | 72.0 |
MS.gene92618.t1 | MTR_1g066800 | 45.333 | 75 | 41 | 0 | 48 | 122 | 118 | 192 | 2.20e-13 | 71.6 |
MS.gene92618.t1 | MTR_1g066800 | 45.333 | 75 | 41 | 0 | 48 | 122 | 123 | 197 | 2.62e-13 | 71.6 |
MS.gene92618.t1 | MTR_6g033415 | 31.364 | 220 | 110 | 5 | 32 | 216 | 98 | 311 | 9.52e-13 | 69.7 |
MS.gene92618.t1 | MTR_5g038620 | 47.945 | 73 | 35 | 1 | 41 | 113 | 117 | 186 | 1.05e-12 | 70.1 |
MS.gene92618.t1 | MTR_1g023760 | 33.088 | 136 | 83 | 5 | 48 | 176 | 126 | 260 | 8.04e-12 | 67.4 |
MS.gene92618.t1 | MTR_3g020990 | 48.485 | 66 | 34 | 0 | 59 | 124 | 103 | 168 | 5.75e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene92618.t1 | AT5G07240 | 44.615 | 325 | 93 | 14 | 40 | 352 | 100 | 349 | 6.94e-54 | 183 |
MS.gene92618.t1 | AT5G07240 | 44.615 | 325 | 93 | 14 | 40 | 352 | 146 | 395 | 1.58e-53 | 184 |
MS.gene92618.t1 | AT5G62070 | 47.619 | 315 | 92 | 12 | 40 | 350 | 111 | 356 | 2.05e-53 | 182 |
MS.gene92618.t1 | AT4G23060 | 34.783 | 368 | 176 | 13 | 38 | 385 | 160 | 483 | 1.74e-36 | 139 |
MS.gene92618.t1 | AT3G16490 | 34.219 | 301 | 116 | 8 | 48 | 340 | 109 | 335 | 7.46e-26 | 107 |
MS.gene92618.t1 | AT4G00820 | 32.440 | 373 | 141 | 15 | 35 | 335 | 120 | 453 | 1.16e-22 | 100 |
MS.gene92618.t1 | AT3G49260 | 59.740 | 77 | 31 | 0 | 38 | 114 | 112 | 188 | 3.65e-20 | 92.4 |
MS.gene92618.t1 | AT3G49260 | 59.740 | 77 | 31 | 0 | 38 | 114 | 112 | 188 | 3.65e-20 | 92.4 |
MS.gene92618.t1 | AT3G49260 | 59.740 | 77 | 31 | 0 | 38 | 114 | 112 | 188 | 3.65e-20 | 92.4 |
MS.gene92618.t1 | AT3G49260 | 59.740 | 77 | 31 | 0 | 38 | 114 | 112 | 188 | 3.88e-20 | 92.0 |
MS.gene92618.t1 | AT4G14750 | 60.563 | 71 | 26 | 1 | 43 | 111 | 100 | 170 | 4.49e-20 | 91.3 |
MS.gene92618.t1 | AT4G14750 | 60.563 | 71 | 26 | 1 | 43 | 111 | 159 | 229 | 6.49e-20 | 91.3 |
MS.gene92618.t1 | AT4G14750 | 60.563 | 71 | 26 | 1 | 43 | 111 | 159 | 229 | 7.66e-20 | 91.3 |
MS.gene92618.t1 | AT1G01110 | 70.769 | 65 | 19 | 0 | 48 | 112 | 123 | 187 | 3.12e-19 | 89.7 |
MS.gene92618.t1 | AT1G51960 | 61.972 | 71 | 27 | 0 | 44 | 114 | 98 | 168 | 7.28e-19 | 87.4 |
MS.gene92618.t1 | AT1G18840 | 33.784 | 148 | 90 | 4 | 41 | 181 | 105 | 251 | 2.39e-18 | 87.0 |
MS.gene92618.t1 | AT1G18840 | 33.784 | 148 | 90 | 4 | 41 | 181 | 105 | 251 | 2.39e-18 | 87.0 |
MS.gene92618.t1 | AT1G18840 | 33.784 | 148 | 90 | 4 | 41 | 181 | 105 | 251 | 2.39e-18 | 87.0 |
MS.gene92618.t1 | AT3G52290 | 50.617 | 81 | 39 | 1 | 44 | 124 | 107 | 186 | 4.95e-18 | 85.5 |
MS.gene92618.t1 | AT3G59690 | 53.030 | 66 | 31 | 0 | 49 | 114 | 172 | 237 | 1.31e-17 | 84.7 |
MS.gene92618.t1 | AT3G59690 | 53.030 | 66 | 31 | 0 | 49 | 114 | 172 | 237 | 1.31e-17 | 84.7 |
MS.gene92618.t1 | AT5G03040 | 48.750 | 80 | 41 | 0 | 43 | 122 | 112 | 191 | 3.33e-17 | 83.2 |
MS.gene92618.t1 | AT5G03040 | 48.750 | 80 | 41 | 0 | 43 | 122 | 112 | 191 | 3.33e-17 | 83.2 |
MS.gene92618.t1 | AT5G03040 | 48.750 | 80 | 41 | 0 | 43 | 122 | 112 | 191 | 3.33e-17 | 83.2 |
MS.gene92618.t1 | AT1G17480 | 57.971 | 69 | 29 | 0 | 48 | 116 | 96 | 164 | 1.62e-16 | 80.9 |
MS.gene92618.t1 | AT5G13460 | 50.685 | 73 | 36 | 0 | 44 | 116 | 109 | 181 | 1.67e-16 | 81.3 |
MS.gene92618.t1 | AT2G43680 | 37.383 | 107 | 46 | 1 | 8 | 114 | 305 | 390 | 4.73e-16 | 80.5 |
MS.gene92618.t1 | AT2G43680 | 37.383 | 107 | 46 | 1 | 8 | 114 | 305 | 390 | 4.73e-16 | 80.5 |
MS.gene92618.t1 | AT2G43680 | 37.383 | 107 | 46 | 1 | 8 | 114 | 305 | 390 | 4.73e-16 | 80.5 |
MS.gene92618.t1 | AT2G43680 | 37.383 | 107 | 46 | 1 | 8 | 114 | 305 | 390 | 4.73e-16 | 80.5 |
MS.gene92618.t1 | AT2G43680 | 37.383 | 107 | 46 | 1 | 8 | 114 | 306 | 391 | 4.73e-16 | 80.5 |
MS.gene92618.t1 | AT4G29150 | 58.209 | 67 | 28 | 0 | 43 | 109 | 128 | 194 | 6.53e-16 | 79.0 |
MS.gene92618.t1 | AT3G22190 | 70.909 | 55 | 16 | 0 | 43 | 97 | 85 | 139 | 9.19e-16 | 79.0 |
MS.gene92618.t1 | AT3G22190 | 70.909 | 55 | 16 | 0 | 43 | 97 | 85 | 139 | 9.19e-16 | 79.0 |
MS.gene92618.t1 | AT3G22190 | 70.909 | 55 | 16 | 0 | 43 | 97 | 85 | 139 | 9.19e-16 | 79.0 |
MS.gene92618.t1 | AT3G22190 | 70.909 | 55 | 16 | 0 | 43 | 97 | 85 | 139 | 9.19e-16 | 79.0 |
MS.gene92618.t1 | AT1G72670 | 62.712 | 59 | 22 | 0 | 48 | 106 | 95 | 153 | 1.67e-15 | 78.2 |
MS.gene92618.t1 | AT1G74690 | 52.055 | 73 | 34 | 1 | 41 | 113 | 109 | 180 | 2.20e-15 | 78.2 |
MS.gene92618.t1 | AT3G49380 | 64.912 | 57 | 20 | 0 | 48 | 104 | 112 | 168 | 3.82e-15 | 76.3 |
MS.gene92618.t1 | AT2G26180 | 61.538 | 65 | 24 | 1 | 33 | 97 | 72 | 135 | 5.97e-15 | 76.3 |
MS.gene92618.t1 | AT4G10640 | 63.158 | 57 | 21 | 0 | 48 | 104 | 102 | 158 | 2.62e-14 | 74.3 |
MS.gene92618.t1 | AT3G51380 | 60.606 | 66 | 25 | 1 | 44 | 109 | 36 | 100 | 6.46e-14 | 67.8 |
MS.gene92618.t1 | AT2G26410 | 45.570 | 79 | 43 | 0 | 34 | 112 | 136 | 214 | 8.82e-14 | 73.2 |
MS.gene92618.t1 | AT2G26410 | 45.570 | 79 | 43 | 0 | 34 | 112 | 136 | 214 | 8.82e-14 | 73.2 |
MS.gene92618.t1 | AT1G19870 | 29.167 | 216 | 119 | 8 | 41 | 248 | 208 | 397 | 6.14e-12 | 67.8 |
MS.gene92618.t1 | AT1G19870 | 29.167 | 216 | 119 | 8 | 41 | 248 | 25 | 214 | 7.30e-12 | 67.4 |
MS.gene92618.t1 | AT3G09710 | 28.571 | 182 | 101 | 3 | 43 | 195 | 105 | 286 | 1.47e-11 | 66.2 |
MS.gene92618.t1 | AT1G14380 | 38.889 | 72 | 44 | 0 | 48 | 119 | 96 | 167 | 3.09e-11 | 65.5 |
MS.gene92618.t1 | AT1G14380 | 38.889 | 72 | 44 | 0 | 48 | 119 | 96 | 167 | 3.09e-11 | 65.5 |
MS.gene92618.t1 | AT1G14380 | 38.889 | 72 | 44 | 0 | 48 | 119 | 96 | 167 | 3.09e-11 | 65.5 |
MS.gene92618.t1 | AT1G14380 | 38.889 | 72 | 44 | 0 | 48 | 119 | 96 | 167 | 3.76e-11 | 65.1 |
MS.gene92618.t1 | AT1G14380 | 38.889 | 72 | 44 | 0 | 48 | 119 | 96 | 167 | 3.76e-11 | 65.1 |
MS.gene92618.t1 | AT1G14380 | 38.889 | 72 | 44 | 0 | 48 | 119 | 96 | 167 | 3.76e-11 | 65.1 |
MS.gene92618.t1 | AT3G09710 | 43.662 | 71 | 40 | 0 | 43 | 113 | 105 | 175 | 3.80e-11 | 64.7 |
MS.gene92618.t1 | AT1G14380 | 38.889 | 72 | 44 | 0 | 48 | 119 | 96 | 167 | 4.32e-11 | 65.1 |
Find 84 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTGCAATGTCACCTTAAAT+TGG | 0.238670 | 6.4:+34647055 | None:intergenic |
GTCTGCTTTCCGAGGTTATT+TGG | 0.243250 | 6.4:-34653386 | MS.gene92618:intron |
TGGCAAATACTCAATCTTCT+AGG | 0.255891 | 6.4:-34647253 | MS.gene92618:CDS |
TTGGGAGTAGTACCAATTTA+AGG | 0.275762 | 6.4:-34647067 | MS.gene92618:CDS |
CTCTGGTTATCCTAGTTATA+TGG | 0.278103 | 6.4:-34647273 | MS.gene92618:CDS |
ATTCAAGGCCTTTGGGAATC+AGG | 0.291166 | 6.4:-34647158 | MS.gene92618:CDS |
CTAGGTCTATTCAAGGCCTT+TGG | 0.325862 | 6.4:-34647166 | MS.gene92618:CDS |
ACAAGTAGCTTGAACAGAAT+TGG | 0.333286 | 6.4:-34647086 | MS.gene92618:CDS |
AGCAAGTCGTGTGCACATTT+CGG | 0.339048 | 6.4:-34649038 | MS.gene92618:CDS |
CTAACCAATTTGAACCTAAC+CGG | 0.349715 | 6.4:+34647705 | None:intergenic |
GTGGACTACTCTCGGCGGTT+CGG | 0.368312 | 6.4:+34647393 | None:intergenic |
TCGATGAAGCGCCGCCGGTT+TGG | 0.373360 | 6.4:+34647654 | None:intergenic |
AGGCTAGAGTTTGAGAGATA+TGG | 0.377602 | 6.4:-34647197 | MS.gene92618:CDS |
GAGCCCGGTTAGGTTCAAAT+TGG | 0.391331 | 6.4:-34647709 | MS.gene92618:CDS |
TGGACTACTCTCGGCGGTTC+GGG | 0.393860 | 6.4:+34647394 | None:intergenic |
CAGAAGAATAAGATCATATA+TGG | 0.404312 | 6.4:-34669958 | MS.gene92618:CDS |
GTCTATAGTACGAAATTTGA+TGG | 0.409912 | 6.4:-34647982 | MS.gene92618:CDS |
CTACTAAAAGTGAGAGTTCA+TGG | 0.413052 | 6.4:-34647313 | MS.gene92618:CDS |
GAAAACACATGGAGCCAAAC+CGG | 0.429881 | 6.4:-34647668 | MS.gene92618:CDS |
TAGGTCTATTCAAGGCCTTT+GGG | 0.441659 | 6.4:-34647165 | MS.gene92618:CDS |
CAAGTAGCTTGAACAGAATT+GGG | 0.453202 | 6.4:-34647085 | MS.gene92618:CDS |
GTTCAAATTGGTTAGACAGT+TGG | 0.455901 | 6.4:-34647697 | MS.gene92618:CDS |
AGAGATATGGTTCATCTACT+AGG | 0.456026 | 6.4:-34647184 | MS.gene92618:CDS |
CATTGGTTCGACTTCAGTCT+CGG | 0.466438 | 6.4:-34649066 | MS.gene92618:CDS |
TGTTAGATTGACAAGTAATA+CGG | 0.469057 | 6.4:-34653497 | MS.gene92618:intron |
GACTGGTCGGAGACGGTTGT+CGG | 0.483725 | 6.4:-34653437 | MS.gene92618:CDS |
CTGTTCAAGCTACTTGTGGC+TGG | 0.485442 | 6.4:+34647092 | None:intergenic |
TCAAACTCTAGCCTTTGTCT+TGG | 0.489677 | 6.4:+34647206 | None:intergenic |
AAATTCTTGAAGTAGATACT+TGG | 0.490960 | 6.4:-34647601 | MS.gene92618:CDS |
CGACCAGTCGTCGGAGTTCG+AGG | 0.493543 | 6.4:+34653451 | None:intergenic |
TACTCAATCTTCTAGGGCTA+AGG | 0.493624 | 6.4:-34647246 | MS.gene92618:CDS |
ACGGCTGGAGGAAATTCTGC+TGG | 0.494889 | 6.4:-34653478 | MS.gene92618:CDS |
AGTGGGTGTTCATAATCATC+AGG | 0.504957 | 6.4:+34648009 | None:intergenic |
TGAGTATTTGCCATATAACT+AGG | 0.506933 | 6.4:+34647263 | None:intergenic |
GGCAAATACTCAATCTTCTA+GGG | 0.514783 | 6.4:-34647252 | MS.gene92618:CDS |
ATTAAGAGCACTTAAAGCAT+TGG | 0.515042 | 6.4:-34649161 | MS.gene92618:CDS |
GGACCTCGAACTCCGACGAC+TGG | 0.515134 | 6.4:-34653454 | MS.gene92618:CDS |
TTCAAGGCCTTTGGGAATCA+GGG | 0.517803 | 6.4:-34647157 | MS.gene92618:CDS |
AACTTTGAAAGAGCCCGGTT+AGG | 0.518762 | 6.4:-34647719 | MS.gene92618:CDS |
AATTCTGTTCAAGCTACTTG+TGG | 0.522848 | 6.4:+34647088 | None:intergenic |
TGCTTCATAGAAGAGAGACT+TGG | 0.525983 | 6.4:+34647449 | None:intergenic |
GAAAGCAGACTGAATCTTCA+CGG | 0.526111 | 6.4:+34653399 | None:intergenic |
GCTTTAGAAGAGCGTTTCGA+CGG | 0.530264 | 6.4:+34647479 | None:intergenic |
ACATGAACTTTGAAAGAGCC+CGG | 0.533175 | 6.4:-34647724 | MS.gene92618:CDS |
CAAGACTCGAAAGTGGTTCG+AGG | 0.538246 | 6.4:-34647352 | MS.gene92618:CDS |
TACTAAAAGTGAGAGTTCAT+GGG | 0.539030 | 6.4:-34647312 | MS.gene92618:CDS |
ATGAATTTGGAAGGCAAGGA+GGG | 0.543058 | 6.4:-34649185 | MS.gene92618:intron |
CGGCTGGAGGAAATTCTGCT+GGG | 0.544359 | 6.4:-34653477 | MS.gene92618:CDS |
AATCTTCTAGGGCTAAGGTT+AGG | 0.545081 | 6.4:-34647241 | MS.gene92618:CDS |
TCATCTACTAGGTCTATTCA+AGG | 0.545942 | 6.4:-34647173 | MS.gene92618:CDS |
ATTGGTTCGACTTCAGTCTC+GGG | 0.550042 | 6.4:-34649065 | MS.gene92618:CDS |
CTCGAACTCCGACGACTGGT+CGG | 0.552351 | 6.4:-34653450 | MS.gene92618:CDS |
GCTTCTTCAAGACTCGAAAG+TGG | 0.557955 | 6.4:-34647359 | MS.gene92618:CDS |
CTATGTTGTGATTTCAAATG+TGG | 0.568605 | 6.4:+34647575 | None:intergenic |
TCGTACTATAGACGCGAAGT+GGG | 0.572818 | 6.4:+34647992 | None:intergenic |
CTCGAAAGTGGTTCGAGGCG+AGG | 0.574732 | 6.4:-34647347 | MS.gene92618:CDS |
TGATGGATCTTCCATCCTCA+AGG | 0.574798 | 6.4:-34647965 | MS.gene92618:intron |
TCTTCTATGAAGCATCAGAA+AGG | 0.575782 | 6.4:-34647440 | MS.gene92618:CDS |
AACCGCCGAGAGTAGTCCAC+AGG | 0.576504 | 6.4:-34647390 | MS.gene92618:CDS |
ATTGGTGAAATTGCAAGCAT+TGG | 0.578065 | 6.4:-34649143 | MS.gene92618:CDS |
TTCGTACTATAGACGCGAAG+TGG | 0.579588 | 6.4:+34647991 | None:intergenic |
AATCATGAATACCTTGAGGA+TGG | 0.581465 | 6.4:+34647954 | None:intergenic |
CTCCGACGACTGGTCGGAGA+CGG | 0.589230 | 6.4:-34653444 | MS.gene92618:CDS |
TGAATAATGATGTTGAAAAG+AGG | 0.593176 | 6.4:+34647544 | None:intergenic |
AAATTGGTTAGACAGTTGGA+TGG | 0.594225 | 6.4:-34647693 | MS.gene92618:CDS |
AAATGCCTGTGGACTACTCT+CGG | 0.594597 | 6.4:+34647385 | None:intergenic |
AACCGTCTCCGACCAGTCGT+CGG | 0.595592 | 6.4:+34653442 | None:intergenic |
AGATTGACAAGTAATACGGC+TGG | 0.600552 | 6.4:-34653493 | MS.gene92618:CDS |
CACAAAGTGCTCCAAGACAA+AGG | 0.601702 | 6.4:-34647217 | MS.gene92618:CDS |
TAACCAATTTGAACCTAACC+GGG | 0.608700 | 6.4:+34647706 | None:intergenic |
AAGATTCAGTCTGCTTTCCG+AGG | 0.610930 | 6.4:-34653394 | MS.gene92618:CDS |
AACACATGGAGCCAAACCGG+CGG | 0.614080 | 6.4:-34647665 | MS.gene92618:CDS |
TATGAATTTGGAAGGCAAGG+AGG | 0.623814 | 6.4:-34649186 | MS.gene92618:intron |
GCTAAGACGAATGCAAACAT+TGG | 0.623828 | 6.4:-34649083 | MS.gene92618:CDS |
TTGACAAGTAATACGGCTGG+AGG | 0.641296 | 6.4:-34653490 | MS.gene92618:CDS |
AAATTGCAAGCATTGGTGAG+AGG | 0.645262 | 6.4:-34649136 | MS.gene92618:CDS |
GGCTGGAGGAAATTCTGCTG+GGG | 0.645912 | 6.4:-34653476 | MS.gene92618:CDS |
ACTAAAAGTGAGAGTTCATG+GGG | 0.653519 | 6.4:-34647311 | MS.gene92618:CDS |
TGGTCGGAGACGGTTGTCGG+AGG | 0.660061 | 6.4:-34653434 | MS.gene92618:CDS |
AATTAGACCCTGATTCCCAA+AGG | 0.667307 | 6.4:+34647150 | None:intergenic |
GTTGGATGGAAGAAAACACA+TGG | 0.681144 | 6.4:-34647679 | MS.gene92618:CDS |
CGTTACATACCAAATAACCT+CGG | 0.683767 | 6.4:+34653377 | None:intergenic |
GCTGGAGGAAATTCTGCTGG+GGG | 0.689410 | 6.4:-34653475 | MS.gene92618:CDS |
TGCCTGTGGACTACTCTCGG+CGG | 0.763952 | 6.4:+34647388 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.4 | gene | 34647064 | 34670004 | 34647064 | ID=MS.gene92618 |
chr6.4 | mRNA | 34647064 | 34670004 | 34647064 | ID=MS.gene92618.t1;Parent=MS.gene92618 |
chr6.4 | exon | 34669952 | 34670004 | 34669952 | ID=MS.gene92618.t1.exon1;Parent=MS.gene92618.t1 |
chr6.4 | CDS | 34669952 | 34670004 | 34669952 | ID=cds.MS.gene92618.t1;Parent=MS.gene92618.t1 |
chr6.4 | exon | 34653387 | 34653513 | 34653387 | ID=MS.gene92618.t1.exon2;Parent=MS.gene92618.t1 |
chr6.4 | CDS | 34653387 | 34653513 | 34653387 | ID=cds.MS.gene92618.t1;Parent=MS.gene92618.t1 |
chr6.4 | exon | 34648997 | 34649194 | 34648997 | ID=MS.gene92618.t1.exon3;Parent=MS.gene92618.t1 |
chr6.4 | CDS | 34648997 | 34649194 | 34648997 | ID=cds.MS.gene92618.t1;Parent=MS.gene92618.t1 |
chr6.4 | exon | 34647966 | 34648034 | 34647966 | ID=MS.gene92618.t1.exon4;Parent=MS.gene92618.t1 |
chr6.4 | CDS | 34647966 | 34648034 | 34647966 | ID=cds.MS.gene92618.t1;Parent=MS.gene92618.t1 |
chr6.4 | exon | 34647064 | 34647774 | 34647064 | ID=MS.gene92618.t1.exon5;Parent=MS.gene92618.t1 |
chr6.4 | CDS | 34647064 | 34647774 | 34647064 | ID=cds.MS.gene92618.t1;Parent=MS.gene92618.t1 |
Gene Sequence |
Protein sequence |