Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene064203.t1 | XP_013455569.1 | 98.7 | 303 | 3 | 1 | 1 | 302 | 1 | 303 | 4.90E-156 | 560.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene064203.t1 | Q7XAB8 | 71.5 | 298 | 77 | 5 | 1 | 297 | 1 | 291 | 9.5e-108 | 391.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene064203.t1 | A0A072UUQ2 | 98.7 | 303 | 3 | 1 | 1 | 302 | 1 | 303 | 3.5e-156 | 560.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049137 | MS.gene064203 | 0.816516 | 5.31E-52 | -1.69E-46 |
MS.gene049427 | MS.gene064203 | 0.812238 | 4.69E-51 | -1.69E-46 |
MS.gene049661 | MS.gene064203 | 0.814187 | 1.75E-51 | -1.69E-46 |
MS.gene049662 | MS.gene064203 | 0.808334 | 3.26E-50 | -1.69E-46 |
MS.gene049805 | MS.gene064203 | 0.804054 | 2.60E-49 | -1.69E-46 |
MS.gene050076 | MS.gene064203 | 0.812613 | 3.88E-51 | -1.69E-46 |
MS.gene050301 | MS.gene064203 | 0.835512 | 1.61E-56 | -1.69E-46 |
MS.gene050406 | MS.gene064203 | 0.803409 | 3.53E-49 | -1.69E-46 |
MS.gene050432 | MS.gene064203 | 0.807584 | 4.71E-50 | -1.69E-46 |
MS.gene050529 | MS.gene064203 | 0.802309 | 5.96E-49 | -1.69E-46 |
MS.gene050625 | MS.gene064203 | 0.81206 | 5.13E-51 | -1.69E-46 |
MS.gene050670 | MS.gene064203 | 0.818948 | 1.50E-52 | -1.69E-46 |
MS.gene050747 | MS.gene064203 | 0.816255 | 6.08E-52 | -1.69E-46 |
MS.gene050770 | MS.gene064203 | 0.801941 | 7.10E-49 | -1.69E-46 |
MS.gene050783 | MS.gene064203 | 0.845256 | 4.55E-59 | -1.69E-46 |
MS.gene050812 | MS.gene064203 | 0.816448 | 5.50E-52 | -1.69E-46 |
MS.gene050950 | MS.gene064203 | 0.801166 | 1.02E-48 | -1.69E-46 |
MS.gene05100 | MS.gene064203 | 0.805171 | 1.52E-49 | -1.69E-46 |
MS.gene05101 | MS.gene064203 | 0.823621 | 1.26E-53 | -1.69E-46 |
MS.gene05105 | MS.gene064203 | 0.816468 | 5.45E-52 | -1.69E-46 |
MS.gene051387 | MS.gene064203 | 0.820872 | 5.45E-53 | -1.69E-46 |
MS.gene051471 | MS.gene064203 | 0.813587 | 2.37E-51 | -1.69E-46 |
MS.gene051582 | MS.gene064203 | 0.836511 | 8.96E-57 | -1.69E-46 |
MS.gene051666 | MS.gene064203 | 0.854746 | 1.00E-61 | -1.69E-46 |
MS.gene051877 | MS.gene064203 | 0.803203 | 3.90E-49 | -1.69E-46 |
MS.gene052253 | MS.gene064203 | 0.814837 | 1.26E-51 | -1.69E-46 |
MS.gene052290 | MS.gene064203 | 0.807989 | 3.86E-50 | -1.69E-46 |
MS.gene052310 | MS.gene064203 | 0.829151 | 6.04E-55 | -1.69E-46 |
MS.gene052322 | MS.gene064203 | 0.808703 | 2.72E-50 | -1.69E-46 |
MS.gene052326 | MS.gene064203 | 0.819503 | 1.12E-52 | -1.69E-46 |
MS.gene052421 | MS.gene064203 | 0.815502 | 8.94E-52 | -1.69E-46 |
MS.gene052481 | MS.gene064203 | 0.822774 | 1.98E-53 | -1.69E-46 |
MS.gene052485 | MS.gene064203 | 0.809812 | 1.57E-50 | -1.69E-46 |
MS.gene052982 | MS.gene064203 | 0.806745 | 7.09E-50 | -1.69E-46 |
MS.gene053103 | MS.gene064203 | 0.878098 | 3.69E-69 | -1.69E-46 |
MS.gene053104 | MS.gene064203 | 0.832029 | 1.19E-55 | -1.69E-46 |
MS.gene053107 | MS.gene064203 | 0.805278 | 1.44E-49 | -1.69E-46 |
MS.gene053322 | MS.gene064203 | 0.851737 | 7.30E-61 | -1.69E-46 |
MS.gene053579 | MS.gene064203 | 0.808835 | 2.55E-50 | -1.69E-46 |
MS.gene054123 | MS.gene064203 | 0.821148 | 4.71E-53 | -1.69E-46 |
MS.gene054408 | MS.gene064203 | 0.803848 | 2.87E-49 | -1.69E-46 |
MS.gene05455 | MS.gene064203 | 0.81482 | 1.27E-51 | -1.69E-46 |
MS.gene054802 | MS.gene064203 | 0.821972 | 3.04E-53 | -1.69E-46 |
MS.gene054803 | MS.gene064203 | 0.819794 | 9.63E-53 | -1.69E-46 |
MS.gene054804 | MS.gene064203 | 0.82208 | 2.87E-53 | -1.69E-46 |
MS.gene055116 | MS.gene064203 | 0.828632 | 8.07E-55 | -1.69E-46 |
MS.gene055412 | MS.gene064203 | 0.815016 | 1.15E-51 | -1.69E-46 |
MS.gene055428 | MS.gene064203 | 0.820767 | 5.76E-53 | -1.69E-46 |
MS.gene055499 | MS.gene064203 | 0.818872 | 1.56E-52 | -1.69E-46 |
MS.gene056407 | MS.gene064203 | 0.856907 | 2.34E-62 | -1.69E-46 |
MS.gene057011 | MS.gene064203 | 0.832915 | 7.20E-56 | -1.69E-46 |
MS.gene05702 | MS.gene064203 | 0.815413 | 9.37E-52 | -1.69E-46 |
MS.gene057123 | MS.gene064203 | 0.825767 | 3.92E-54 | -1.69E-46 |
MS.gene057129 | MS.gene064203 | 0.82962 | 4.65E-55 | -1.69E-46 |
MS.gene057146 | MS.gene064203 | 0.855559 | 5.82E-62 | -1.69E-46 |
MS.gene057295 | MS.gene064203 | 0.806296 | 8.81E-50 | -1.69E-46 |
MS.gene057310 | MS.gene064203 | 0.800207 | 1.61E-48 | -1.69E-46 |
MS.gene057416 | MS.gene064203 | 0.819962 | 8.82E-53 | -1.69E-46 |
MS.gene058019 | MS.gene064203 | 0.829386 | 5.30E-55 | -1.69E-46 |
MS.gene058233 | MS.gene064203 | 0.809387 | 1.94E-50 | -1.69E-46 |
MS.gene058293 | MS.gene064203 | 0.867642 | 1.18E-65 | -1.69E-46 |
MS.gene058660 | MS.gene064203 | 0.844786 | 6.09E-59 | -1.69E-46 |
MS.gene058700 | MS.gene064203 | 0.805185 | 1.51E-49 | -1.69E-46 |
MS.gene05907 | MS.gene064203 | 0.815696 | 8.10E-52 | -1.69E-46 |
MS.gene059141 | MS.gene064203 | 0.803007 | 4.28E-49 | -1.69E-46 |
MS.gene059536 | MS.gene064203 | 0.847835 | 8.99E-60 | -1.69E-46 |
MS.gene059597 | MS.gene064203 | 0.827398 | 1.60E-54 | -1.69E-46 |
MS.gene059688 | MS.gene064203 | 0.848486 | 5.95E-60 | -1.69E-46 |
MS.gene059692 | MS.gene064203 | 0.84076 | 7.16E-58 | -1.69E-46 |
MS.gene059695 | MS.gene064203 | 0.84585 | 3.14E-59 | -1.69E-46 |
MS.gene059960 | MS.gene064203 | 0.845685 | 3.48E-59 | -1.69E-46 |
MS.gene060403 | MS.gene064203 | 0.844939 | 5.54E-59 | -1.69E-46 |
MS.gene060804 | MS.gene064203 | 0.805613 | 1.23E-49 | -1.69E-46 |
MS.gene06090 | MS.gene064203 | 0.800557 | 1.36E-48 | -1.69E-46 |
MS.gene06092 | MS.gene064203 | 0.802819 | 4.68E-49 | -1.69E-46 |
MS.gene061049 | MS.gene064203 | 0.81055 | 1.09E-50 | -1.69E-46 |
MS.gene061200 | MS.gene064203 | 0.834449 | 2.98E-56 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene006258 | MS.gene064203 | PPI |
MS.gene30963 | MS.gene064203 | PPI |
MS.gene061150 | MS.gene064203 | PPI |
MS.gene064203 | MS.gene30964 | PPI |
MS.gene052115 | MS.gene064203 | PPI |
MS.gene49126 | MS.gene064203 | PPI |
MS.gene050301 | MS.gene064203 | PPI |
MS.gene052116 | MS.gene064203 | PPI |
MS.gene24695 | MS.gene064203 | PPI |
MS.gene45498 | MS.gene064203 | PPI |
MS.gene064203 | MS.gene34133 | PPI |
MS.gene31148 | MS.gene064203 | PPI |
MS.gene064203 | MS.gene007198 | PPI |
MS.gene24730 | MS.gene064203 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene064203.t1 | MTR_4g045980 | 98.680 | 303 | 3 | 1 | 1 | 302 | 1 | 303 | 0.0 | 607 |
MS.gene064203.t1 | MTR_2g089795 | 76.042 | 288 | 67 | 2 | 1 | 288 | 1 | 286 | 6.51e-159 | 444 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene064203.t1 | AT2G20890 | 69.024 | 297 | 73 | 5 | 2 | 292 | 3 | 286 | 7.08e-143 | 404 |
Find 69 sgRNAs with CRISPR-Local
Find 370 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGCAATGGAACCAACAATTT+TGG | 0.156594 | 4.2:-56025949 | MS.gene064203:CDS |
CTTTCTTCCACTCGCTTCTT+TGG | 0.228211 | 4.2:-56030864 | MS.gene064203:CDS |
TTCCAATTCCGTTTCCAAAT+TGG | 0.229620 | 4.2:-56030778 | MS.gene064203:CDS |
AGAAGTTGAGGGGACTTTAA+AGG | 0.233722 | 4.2:-56026060 | MS.gene064203:CDS |
TGAGGCCATTTCAAAATGTT+TGG | 0.285166 | 4.2:-56024687 | MS.gene064203:CDS |
GGAACACCGAACAACCAATT+TGG | 0.320518 | 4.2:+56030764 | None:intergenic |
CGGTGTTCCTCTTCTGTGTC+AGG | 0.335981 | 4.2:-56030750 | MS.gene064203:intron |
AACCAATTTGGAAACGGAAT+TGG | 0.346208 | 4.2:+56030776 | None:intergenic |
CTAACTCAAGAAGACGAAAA+AGG | 0.351619 | 4.2:+56025976 | None:intergenic |
ACACTCATTCTAACCTGTAT+TGG | 0.353763 | 4.2:+56027470 | None:intergenic |
CTCTAGATGAAAACTCAATC+AGG | 0.355791 | 4.2:+56026087 | None:intergenic |
GCAGAAAGAGCGGGTGGAAA+TGG | 0.361398 | 4.2:-56026032 | MS.gene064203:CDS |
CCGTTTCCAAATTGGTTGTT+CGG | 0.370999 | 4.2:-56030770 | MS.gene064203:CDS |
GAGGCCATTTCAAAATGTTT+GGG | 0.371107 | 4.2:-56024686 | MS.gene064203:CDS |
TGTATCTCATCAAATGTTGC+TGG | 0.375097 | 4.2:+56027632 | None:intergenic |
TATGATCCTGTATTTGCTCT+TGG | 0.383099 | 4.2:-56027595 | MS.gene064203:CDS |
CACTCATTCTAACCTGTATT+GGG | 0.405031 | 4.2:+56027471 | None:intergenic |
CAGAAAGAGCGGGTGGAAAT+GGG | 0.407573 | 4.2:-56026031 | MS.gene064203:CDS |
TCGCAATCTGCTTTCTAAGT+TGG | 0.429863 | 4.2:-56025312 | MS.gene064203:CDS |
AGCATATCTTTGCGCTATGT+TGG | 0.431929 | 4.2:-56030810 | MS.gene064203:CDS |
GAAGAAGAAAATAGAAGAAA+GGG | 0.446296 | 4.2:-56024729 | MS.gene064203:CDS |
AGAAGAAGAAAATAGAAGAA+AGG | 0.447419 | 4.2:-56024730 | MS.gene064203:CDS |
TATCTATAACTCCGTGCTAC+AGG | 0.455869 | 4.2:-56027665 | MS.gene064203:CDS |
AGCATACATTAACGCATTGA+AGG | 0.462951 | 4.2:-56027503 | MS.gene064203:CDS |
AGGAAGATCCAGCCCAATAC+AGG | 0.469089 | 4.2:-56027483 | MS.gene064203:intron |
CAAAGAAGCGAGTGGAAGAA+AGG | 0.475729 | 4.2:+56030865 | None:intergenic |
GTTCCGATTCAGATGCAGTT+CGG | 0.478573 | 4.2:-56030842 | MS.gene064203:CDS |
AGAAAGGGCTGAACCACAAA+AGG | 0.489128 | 4.2:-56024714 | MS.gene064203:CDS |
AAACCGAACTGCATCTGAAT+CGG | 0.490474 | 4.2:+56030839 | None:intergenic |
CATTCTAACCTGTATTGGGC+TGG | 0.493657 | 4.2:+56027475 | None:intergenic |
TGCTAAAGGAATACATTGAC+AGG | 0.497269 | 4.2:-56025274 | MS.gene064203:intron |
TGCACAGAAGTTAGAAGAGT+GGG | 0.505507 | 4.2:-56026132 | MS.gene064203:CDS |
AACTTTGTCTCAGAAACAGT+TGG | 0.506286 | 4.2:+56027724 | None:intergenic |
ATCTAGAGAAGGAGAAGTTG+AGG | 0.517674 | 4.2:-56026072 | MS.gene064203:CDS |
CCGAACAACCAATTTGGAAA+CGG | 0.518129 | 4.2:+56030770 | None:intergenic |
TCAATGCGTTAATGTATGCT+TGG | 0.520925 | 4.2:+56027506 | None:intergenic |
ACAAAGCCAAGAGCAAATAC+AGG | 0.548987 | 4.2:+56027589 | None:intergenic |
TCTAGAGAAGGAGAAGTTGA+GGG | 0.549571 | 4.2:-56026071 | MS.gene064203:CDS |
TGAACCACAAAAGGCTAATG+AGG | 0.552905 | 4.2:-56024705 | MS.gene064203:CDS |
ACAAGCTAAAGAGCTGCTAA+AGG | 0.557940 | 4.2:-56025288 | MS.gene064203:CDS |
AAGGATATTGCAGAAAGAGC+GGG | 0.557982 | 4.2:-56026041 | MS.gene064203:CDS |
TTTCAAACCTGACACAGAAG+AGG | 0.562747 | 4.2:+56030743 | None:intergenic |
CACTGTATATGACCAACTCA+TGG | 0.564562 | 4.2:-56027566 | MS.gene064203:CDS |
TAGGATACCCTTCCATGAGT+TGG | 0.569068 | 4.2:+56027554 | None:intergenic |
TATAGTCGTTTCTTTGCAGT+AGG | 0.573306 | 4.2:-56025999 | MS.gene064203:CDS |
GTATATGACCAACTCATGGA+AGG | 0.575651 | 4.2:-56027562 | MS.gene064203:CDS |
GACAATGAGCTCCTGTAGCA+CGG | 0.575789 | 4.2:+56027654 | None:intergenic |
TCTTGAGTTAGCAAATGCAA+TGG | 0.577069 | 4.2:-56025964 | MS.gene064203:CDS |
AAAGAAGCGAGTGGAAGAAA+GGG | 0.581082 | 4.2:+56030866 | None:intergenic |
TCTAGATGAAAACTCAATCA+GGG | 0.581656 | 4.2:+56026088 | None:intergenic |
GAAGAAGTTACTGCGGCCAT+CGG | 0.584598 | 4.2:+56030936 | None:intergenic |
TTTGTCTCAGAAACAGTTGG+AGG | 0.595131 | 4.2:+56027727 | None:intergenic |
GCATCTCTATCCTCATCACT+AGG | 0.603750 | 4.2:+56027535 | None:intergenic |
TTGTCTCAGAAACAGTTGGA+GGG | 0.613813 | 4.2:+56027728 | None:intergenic |
AAAGGATATTGCAGAAAGAG+CGG | 0.616391 | 4.2:-56026042 | MS.gene064203:CDS |
AGAAAGAGCGGGTGGAAATG+GGG | 0.617727 | 4.2:-56026030 | MS.gene064203:CDS |
ATGCACAGAAGTTAGAAGAG+TGG | 0.618365 | 4.2:-56026133 | MS.gene064203:CDS |
AGCACGGAGTTATAGATACT+AGG | 0.618724 | 4.2:+56027670 | None:intergenic |
GTTAATGTATGCTTGGAAGA+TGG | 0.618779 | 4.2:+56027513 | None:intergenic |
GAGCAAATACAGGATCATAA+CGG | 0.626380 | 4.2:+56027599 | None:intergenic |
ATCGGAACCAAAGAAGCGAG+TGG | 0.641210 | 4.2:+56030857 | None:intergenic |
TATATGACCAACTCATGGAA+GGG | 0.644279 | 4.2:-56027561 | MS.gene064203:CDS |
GAGTTATAGATACTAGGTAT+CGG | 0.644904 | 4.2:+56027676 | None:intergenic |
CTAGAGAAGGAGAAGTTGAG+GGG | 0.650582 | 4.2:-56026070 | MS.gene064203:CDS |
CACTCACTCAATCTTCTCAG+AGG | 0.654132 | 4.2:-56030899 | MS.gene064203:CDS |
GATATTGCAGAAAGAGCGGG+TGG | 0.670621 | 4.2:-56026038 | MS.gene064203:CDS |
GGAAGGGTATCCTAGTGATG+AGG | 0.675183 | 4.2:-56027545 | MS.gene064203:CDS |
GAAGCGAGTGGAAGAAAGGG+TGG | 0.676271 | 4.2:+56030869 | None:intergenic |
TGAGAAAGAAGAAGTTACTG+CGG | 0.719408 | 4.2:+56030929 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAGAATAATTACTAAATTT+AGG | + | chr4.2:56025785-56025804 | None:intergenic | 10.0% |
!! | AATATAAATAAAGGAAATTA+TGG | + | chr4.2:56029911-56029930 | None:intergenic | 10.0% |
!! | ATATAAATAAAGGAAATTAT+GGG | + | chr4.2:56029910-56029929 | None:intergenic | 10.0% |
!! | ATATATAATAAAACAAGTAT+AGG | + | chr4.2:56029715-56029734 | None:intergenic | 10.0% |
!! | CAGTAAAAATTATAAAATAA+AGG | + | chr4.2:56025630-56025649 | None:intergenic | 10.0% |
!! | GAAATAAAAAAAACTTATTA+AGG | - | chr4.2:56029192-56029211 | MS.gene064203:intron | 10.0% |
!!! | AGTTAATATTTAATTTTTGA+AGG | + | chr4.2:56027437-56027456 | None:intergenic | 10.0% |
!!! | TAAATAATTTTTTCCTTAAA+TGG | + | chr4.2:56028867-56028886 | None:intergenic | 10.0% |
!!! | TCAATTTTCAATATAAATAA+AGG | + | chr4.2:56029920-56029939 | None:intergenic | 10.0% |
!!! | TTAGAATTTGATTTTTTAAT+TGG | - | chr4.2:56024960-56024979 | MS.gene064203:intron | 10.0% |
!! | AACTCAATAATTGAATATAA+TGG | - | chr4.2:56028189-56028208 | MS.gene064203:intron | 15.0% |
!! | ACATTCAAATATTATATCAT+AGG | + | chr4.2:56030391-56030410 | None:intergenic | 15.0% |
!! | AGTGCATATTTAATTATTAA+GGG | + | chr4.2:56028784-56028803 | None:intergenic | 15.0% |
!! | ATTTATTCAAAATCAAATCT+AGG | + | chr4.2:56029371-56029390 | None:intergenic | 15.0% |
!! | CATATTATTATCTTGATAAA+AGG | + | chr4.2:56027708-56027727 | None:intergenic | 15.0% |
!! | TAGTGCATATTTAATTATTA+AGG | + | chr4.2:56028785-56028804 | None:intergenic | 15.0% |
!!! | AACTTTTTTAAACAAAAAGT+TGG | + | chr4.2:56026458-56026477 | None:intergenic | 15.0% |
!!! | AATTTTTTAATAATGTATCG+AGG | + | chr4.2:56026867-56026886 | None:intergenic | 15.0% |
!!! | ACTTTTTTAAACAAAAAGTT+GGG | + | chr4.2:56026457-56026476 | None:intergenic | 15.0% |
!!! | AGTATAAGTTTTATTTTTCA+AGG | + | chr4.2:56028725-56028744 | None:intergenic | 15.0% |
!!! | ATTTTTTAATTGGAAGTATA+TGG | - | chr4.2:56024970-56024989 | MS.gene064203:intron | 15.0% |
!!! | GAATTTTGATTATATTAAAG+TGG | - | chr4.2:56029108-56029127 | MS.gene064203:intron | 15.0% |
!!! | GTATAAGTTTTATTTTTCAA+GGG | + | chr4.2:56028724-56028743 | None:intergenic | 15.0% |
!!! | TAATTTTAAAACACCATTTA+AGG | - | chr4.2:56028851-56028870 | MS.gene064203:intron | 15.0% |
!!! | TCTTTTTCTTTTTCTTTAAA+AGG | - | chr4.2:56027318-56027337 | MS.gene064203:intron | 15.0% |
!! | AAATTATAAAATAAAGGGCA+TGG | + | chr4.2:56025624-56025643 | None:intergenic | 20.0% |
!! | AACTGAAAAACTTAGTAAAT+AGG | + | chr4.2:56030610-56030629 | None:intergenic | 20.0% |
!! | AATTTGGATTCAAAAATCAT+TGG | + | chr4.2:56025489-56025508 | None:intergenic | 20.0% |
!! | ATATTTAATTATTAAGGGAG+GGG | + | chr4.2:56028779-56028798 | None:intergenic | 20.0% |
!! | CACATAAACTATTATTTATG+GGG | + | chr4.2:56025958-56025977 | None:intergenic | 20.0% |
!! | CATATTTAATTATTAAGGGA+GGG | + | chr4.2:56028780-56028799 | None:intergenic | 20.0% |
!! | CATGACAATTTAAATGAATT+GGG | + | chr4.2:56029671-56029690 | None:intergenic | 20.0% |
!! | CCACATAAACTATTATTTAT+GGG | + | chr4.2:56025959-56025978 | None:intergenic | 20.0% |
!! | TAAAAAAAACTTATTAAGGG+AGG | - | chr4.2:56029196-56029215 | MS.gene064203:intron | 20.0% |
!! | TATTATCTTGATAAAAGGAA+AGG | + | chr4.2:56027703-56027722 | None:intergenic | 20.0% |
!! | TCATGACAATTTAAATGAAT+TGG | + | chr4.2:56029672-56029691 | None:intergenic | 20.0% |
!! | TTAATTAATTAAAGTGACAG+AGG | + | chr4.2:56026410-56026429 | None:intergenic | 20.0% |
!! | TTATGTATTATGTGTATGTT+TGG | + | chr4.2:56025431-56025450 | None:intergenic | 20.0% |
!! | TTCTCATTTAACAATAATCA+TGG | + | chr4.2:56028519-56028538 | None:intergenic | 20.0% |
!!! | ACTATTGTATTTTCTGAAAA+AGG | + | chr4.2:56030666-56030685 | None:intergenic | 20.0% |
!!! | AGTGTATATTTTAACATAAG+AGG | - | chr4.2:56029324-56029343 | MS.gene064203:intron | 20.0% |
!!! | AGTGTATATTTTAACTTAAG+AGG | + | chr4.2:56028696-56028715 | None:intergenic | 20.0% |
!!! | ATGTAATTCTAGCTTTTTTT+AGG | - | chr4.2:56029252-56029271 | MS.gene064203:intron | 20.0% |
!!! | ATTGTAGATTTTAACATAAG+AGG | - | chr4.2:56029221-56029240 | MS.gene064203:intron | 20.0% |
!!! | CTTTTAATTGAAAATTAAGC+TGG | - | chr4.2:56030581-56030600 | MS.gene064203:intron | 20.0% |
!!! | GTGATCTTAATTTTATGAAA+AGG | + | chr4.2:56030521-56030540 | None:intergenic | 20.0% |
!!! | GTGTATATTTTAACATAAGA+GGG | - | chr4.2:56029325-56029344 | MS.gene064203:intron | 20.0% |
!!! | GTGTATATTTTAACTTAAGA+GGG | + | chr4.2:56028695-56028714 | None:intergenic | 20.0% |
!!! | TATATTCTATCTAATTTGTG+CGG | + | chr4.2:56027004-56027023 | None:intergenic | 20.0% |
!!! | TGTAATTCTAGCTTTTTTTA+GGG | - | chr4.2:56029253-56029272 | MS.gene064203:intron | 20.0% |
!!! | TGTATATTTTAACATAAGAG+GGG | - | chr4.2:56029326-56029345 | MS.gene064203:intron | 20.0% |
!!! | TTCATTTTTTTGAGAATTTG+AGG | - | chr4.2:56024912-56024931 | MS.gene064203:intron | 20.0% |
!!! | TTGAACTATAAATTTTTGTG+CGG | - | chr4.2:56025273-56025292 | MS.gene064203:intron | 20.0% |
!!! | TTGTAGATTTTAACATAAGA+GGG | - | chr4.2:56029222-56029241 | MS.gene064203:intron | 20.0% |
!!! | TTTACTTGATATTTTTGGAT+AGG | - | chr4.2:56026086-56026105 | MS.gene064203:CDS | 20.0% |
!!! | TTTTTATTTCTTTTCCCTTT+TGG | + | chr4.2:56027777-56027796 | None:intergenic | 20.0% |
!!! | TTTTTGAAGTTTTGTTTATG+AGG | - | chr4.2:56025013-56025032 | MS.gene064203:intron | 20.0% |
! | AACATAAGACAACACTAATA+TGG | - | chr4.2:56025702-56025721 | MS.gene064203:intron | 25.0% |
! | AAGAAATATAACTACAAGTC+TGG | + | chr4.2:56027291-56027310 | None:intergenic | 25.0% |
! | AGAAGAAGAAAATAGAAGAA+AGG | - | chr4.2:56030855-56030874 | MS.gene064203:CDS | 25.0% |
! | ATAGTTTATGTGGCTAAATA+AGG | - | chr4.2:56025966-56025985 | MS.gene064203:CDS | 25.0% |
! | ATTTACAGGAAAATTTCTCA+GGG | + | chr4.2:56026634-56026653 | None:intergenic | 25.0% |
! | CAAAACACTTTGATTATGTT+TGG | - | chr4.2:56025135-56025154 | MS.gene064203:intron | 25.0% |
! | CAAATCCAGAATTAGATTAT+TGG | + | chr4.2:56028263-56028282 | None:intergenic | 25.0% |
! | CAATAATCTAATTCTGGATT+TGG | - | chr4.2:56028261-56028280 | MS.gene064203:intron | 25.0% |
! | CCATACACAAAAATTATTAG+TGG | + | chr4.2:56030156-56030175 | None:intergenic | 25.0% |
! | CCCATAAATAATAGTTTATG+TGG | - | chr4.2:56025956-56025975 | MS.gene064203:CDS | 25.0% |
! | CTGTAAAAGTGATTTATGTT+TGG | - | chr4.2:56025229-56025248 | MS.gene064203:intron | 25.0% |
! | GAAGAAGAAAATAGAAGAAA+GGG | - | chr4.2:56030856-56030875 | MS.gene064203:CDS | 25.0% |
! | GAAGTATGAATTTGCAATTT+AGG | + | chr4.2:56027755-56027774 | None:intergenic | 25.0% |
! | GATTTCAGATTGATATTTAC+AGG | + | chr4.2:56026648-56026667 | None:intergenic | 25.0% |
! | GCATATTTAATTATTAAGGG+AGG | + | chr4.2:56028781-56028800 | None:intergenic | 25.0% |
! | GCCACATAAACTATTATTTA+TGG | + | chr4.2:56025960-56025979 | None:intergenic | 25.0% |
! | TATATATGTCGACAAAATAG+TGG | - | chr4.2:56028557-56028576 | MS.gene064203:intron | 25.0% |
! | TATTTAATTATTAAGGGAGG+GGG | + | chr4.2:56028778-56028797 | None:intergenic | 25.0% |
! | TATTTACAGGAAAATTTCTC+AGG | + | chr4.2:56026635-56026654 | None:intergenic | 25.0% |
! | TCATAACATGTCGAAAATTT+AGG | + | chr4.2:56030772-56030791 | None:intergenic | 25.0% |
! | TCATTTAACAATAATCATGG+AGG | + | chr4.2:56028516-56028535 | None:intergenic | 25.0% |
! | TCTTCTAACCTAAAAACATA+GGG | + | chr4.2:56027244-56027263 | None:intergenic | 25.0% |
! | TTCATCGGTAATAAACATTT+AGG | - | chr4.2:56030004-56030023 | MS.gene064203:intron | 25.0% |
! | TTGTTATCAATACTTAGTCA+TGG | - | chr4.2:56027810-56027829 | MS.gene064203:intron | 25.0% |
!! | AAAATTGATTCTGACATGTT+TGG | + | chr4.2:56025389-56025408 | None:intergenic | 25.0% |
!! | AATAATTTTTGTGTATGGCT+GGG | - | chr4.2:56030158-56030177 | MS.gene064203:intron | 25.0% |
!! | AATATGTAAGACAGAAGTAT+AGG | - | chr4.2:56027342-56027361 | MS.gene064203:intron | 25.0% |
!! | AGTGTATTCAAGATTCTTTT+AGG | + | chr4.2:56028666-56028685 | None:intergenic | 25.0% |
!! | ATTAGTGTTGTCTTATGTTT+TGG | + | chr4.2:56025701-56025720 | None:intergenic | 25.0% |
!! | CCACTAATAATTTTTGTGTA+TGG | - | chr4.2:56030153-56030172 | MS.gene064203:intron | 25.0% |
!! | CTAATATGTTTTGCATAAGA+GGG | - | chr4.2:56029295-56029314 | MS.gene064203:intron | 25.0% |
!! | CTGCATTTACTTGATATTTT+TGG | - | chr4.2:56026081-56026100 | MS.gene064203:CDS | 25.0% |
!! | GACAAAGTTAAATTTTCTCA+AGG | - | chr4.2:56027875-56027894 | MS.gene064203:intron | 25.0% |
!! | GTGTATTCAAGATTCTTTTA+GGG | + | chr4.2:56028665-56028684 | None:intergenic | 25.0% |
!! | TAATAATTTTTGTGTATGGC+TGG | - | chr4.2:56030157-56030176 | MS.gene064203:intron | 25.0% |
!! | TCGAATTGATTCTGTAAAAT+TGG | - | chr4.2:56025185-56025204 | MS.gene064203:intron | 25.0% |
!! | TCTAATATGTTTTGCATAAG+AGG | - | chr4.2:56029294-56029313 | MS.gene064203:intron | 25.0% |
!! | TGTATTCAAGATTCTTTTAG+GGG | + | chr4.2:56028664-56028683 | None:intergenic | 25.0% |
!! | TGTTGTAATTGGAAGTATAA+CGG | - | chr4.2:56028468-56028487 | MS.gene064203:intron | 25.0% |
!! | TTATTTTCCATGCTCTATAT+AGG | + | chr4.2:56026211-56026230 | None:intergenic | 25.0% |
!! | TTGTTCTTGAACTATCTTTT+AGG | - | chr4.2:56026304-56026323 | MS.gene064203:intron | 25.0% |
!!! | AAGTTTTATTTTTCAAGGGA+GGG | + | chr4.2:56028720-56028739 | None:intergenic | 25.0% |
!!! | ATGACTAAGTATTGATAACA+AGG | + | chr4.2:56027811-56027830 | None:intergenic | 25.0% |
!!! | CAATTATTGAGTTGAACATT+TGG | + | chr4.2:56028182-56028201 | None:intergenic | 25.0% |
!!! | GTAATTCTAGCTTTTTTTAG+GGG | - | chr4.2:56029254-56029273 | MS.gene064203:intron | 25.0% |
!!! | TAAGTTTTATTTTTCAAGGG+AGG | + | chr4.2:56028721-56028740 | None:intergenic | 25.0% |
!!! | TGTAGATTTTAACATAAGAG+GGG | - | chr4.2:56029223-56029242 | MS.gene064203:intron | 25.0% |
!!! | TGTTATGATTATAACTTGCT+TGG | - | chr4.2:56030784-56030803 | MS.gene064203:CDS | 25.0% |
!!! | TTACTAAGTTTTTCAGTTCA+GGG | - | chr4.2:56030612-56030631 | MS.gene064203:intron | 25.0% |
!!! | TTTACTAAGTTTTTCAGTTC+AGG | - | chr4.2:56030611-56030630 | MS.gene064203:intron | 25.0% |
!!! | TTTTTTGAGAATTTGAGGAT+TGG | - | chr4.2:56024917-56024936 | MS.gene064203:intron | 25.0% |
AAACAAAAAGTTGGGCAAAA+GGG | + | chr4.2:56026449-56026468 | None:intergenic | 30.0% | |
AAACAAGTATAGGACTAAGT+TGG | + | chr4.2:56029705-56029724 | None:intergenic | 30.0% | |
AAACTGTGTATTCAATGCAT+TGG | + | chr4.2:56025874-56025893 | None:intergenic | 30.0% | |
AACAACTTAATAGCATTGCA+AGG | + | chr4.2:56030347-56030366 | None:intergenic | 30.0% | |
AACAAGTATAGGACTAAGTT+GGG | + | chr4.2:56029704-56029723 | None:intergenic | 30.0% | |
AAGCATATAAGGAAGCAATT+TGG | + | chr4.2:56025505-56025524 | None:intergenic | 30.0% | |
AGATGATTTAACACAGTCTA+TGG | + | chr4.2:56028238-56028257 | None:intergenic | 30.0% | |
AGCAGAAAAGCTTATAAAAG+TGG | - | chr4.2:56026239-56026258 | MS.gene064203:intron | 30.0% | |
AGTACTTATGATGTTCTCTT+TGG | + | chr4.2:56027048-56027067 | None:intergenic | 30.0% | |
ATCAGTGAAACTGTAGAATA+AGG | + | chr4.2:56026515-56026534 | None:intergenic | 30.0% | |
CCCACAATACTATTTATCTT+CGG | - | chr4.2:56029132-56029151 | MS.gene064203:intron | 30.0% | |
CCGAAGATAAATAGTATTGT+GGG | + | chr4.2:56029135-56029154 | None:intergenic | 30.0% | |
CTCTTCTAACCTAAAAACAT+AGG | + | chr4.2:56027245-56027264 | None:intergenic | 30.0% | |
CTTAAAATGTGGCAAACAAA+AGG | + | chr4.2:56026166-56026185 | None:intergenic | 30.0% | |
CTTCAGCTAATGAAATAAGT+TGG | + | chr4.2:56029822-56029841 | None:intergenic | 30.0% | |
CTTCCAATTACAACATTATC+AGG | + | chr4.2:56028463-56028482 | None:intergenic | 30.0% | |
GAATTACTCAGTAACTTTGA+AGG | - | chr4.2:56029970-56029989 | MS.gene064203:intron | 30.0% | |
GAGTTATAGATACTAGGTAT+CGG | + | chr4.2:56027912-56027931 | None:intergenic | 30.0% | |
GCAAATTCATACTTCCAAAA+GGG | - | chr4.2:56027760-56027779 | MS.gene064203:intron | 30.0% | |
GTGTTATCAATCTCAGATAA+CGG | - | chr4.2:56025545-56025564 | MS.gene064203:intron | 30.0% | |
TAAACAAAAAGTTGGGCAAA+AGG | + | chr4.2:56026450-56026469 | None:intergenic | 30.0% | |
TAAGAACTGACACATTAATG+CGG | - | chr4.2:56025069-56025088 | MS.gene064203:intron | 30.0% | |
TAATCTAATTCTGGATTTGG+AGG | - | chr4.2:56028264-56028283 | MS.gene064203:intron | 30.0% | |
TAGAATTCAATCAGTGGTAA+TGG | - | chr4.2:56027178-56027197 | MS.gene064203:intron | 30.0% | |
TAGCTTTCCAAACATGATTT+CGG | - | chr4.2:56028291-56028310 | MS.gene064203:intron | 30.0% | |
TCACAAATCACAAAATCATG+TGG | + | chr4.2:56028365-56028384 | None:intergenic | 30.0% | |
TCCGAAGATAAATAGTATTG+TGG | + | chr4.2:56029136-56029155 | None:intergenic | 30.0% | |
TCTAGATGAAAACTCAATCA+GGG | + | chr4.2:56029500-56029519 | None:intergenic | 30.0% | |
TCTCAATTGAATTATGTCGT+TGG | - | chr4.2:56025097-56025116 | MS.gene064203:intron | 30.0% | |
TCTCACCAATAATCTAATTC+TGG | - | chr4.2:56028255-56028274 | MS.gene064203:intron | 30.0% | |
TGCAAATTCATACTTCCAAA+AGG | - | chr4.2:56027759-56027778 | MS.gene064203:intron | 30.0% | |
TTAAAATTCCCGATACGATA+CGG | - | chr4.2:56026841-56026860 | MS.gene064203:intron | 30.0% | |
! | AAGTTGTTCTCACTTCTTTT+GGG | - | chr4.2:56030359-56030378 | MS.gene064203:intron | 30.0% |
! | ACAAGAAACCCTATGTTTTT+AGG | - | chr4.2:56027233-56027252 | MS.gene064203:intron | 30.0% |
! | ATAAAATAAAGGGCATGGTT+AGG | + | chr4.2:56025619-56025638 | None:intergenic | 30.0% |
! | ATACGATACTTCACCATTTT+TGG | - | chr4.2:56027604-56027623 | MS.gene064203:CDS | 30.0% |
! | ATATGGACTGCACATAAATA+AGG | - | chr4.2:56025719-56025738 | MS.gene064203:intron | 30.0% |
! | ATTGAGTTTTCATCTAGAGA+AGG | - | chr4.2:56029502-56029521 | MS.gene064203:intron | 30.0% |
! | CATGTCGAAAATTTAGGTTA+AGG | + | chr4.2:56030766-56030785 | None:intergenic | 30.0% |
! | GTAACCTTTTCCAAAATTGT+TGG | + | chr4.2:56029649-56029668 | None:intergenic | 30.0% |
! | GTATCAATCCACAGAATTTT+GGG | + | chr4.2:56026596-56026615 | None:intergenic | 30.0% |
! | GTTCCTGATAATGTTGTAAT+TGG | - | chr4.2:56028457-56028476 | MS.gene064203:intron | 30.0% |
! | TAAGTTGTTCTCACTTCTTT+TGG | - | chr4.2:56030358-56030377 | MS.gene064203:intron | 30.0% |
! | TATAGGCCAGTGTATTTTAT+TGG | + | chr4.2:56026194-56026213 | None:intergenic | 30.0% |
! | TATCAATCCACAGAATTTTG+GGG | + | chr4.2:56026595-56026614 | None:intergenic | 30.0% |
! | TATTGGAGCATCTTAAAATG+TGG | + | chr4.2:56026177-56026196 | None:intergenic | 30.0% |
! | TGGTTGTGAAATTTTCATCT+CGG | - | chr4.2:56024990-56025009 | MS.gene064203:intron | 30.0% |
!! | AAAAAGTGTTGATCGAGATT+TGG | - | chr4.2:56030243-56030262 | MS.gene064203:intron | 30.0% |
!! | ACATAATCAAAGTGTTTTGC+AGG | + | chr4.2:56025134-56025153 | None:intergenic | 30.0% |
!! | GTTGTGAATAGTTCTGAATT+CGG | - | chr4.2:56027727-56027746 | MS.gene064203:CDS | 30.0% |
!! | TGTTCTATTTTCAAGAGTCT+TGG | + | chr4.2:56026011-56026030 | None:intergenic | 30.0% |
!! | TTGTCCCAAACATTTTGAAA+TGG | + | chr4.2:56030906-56030925 | None:intergenic | 30.0% |
!!! | ACTGATTAGTTTTCTAGAAC+TGG | + | chr4.2:56029786-56029805 | None:intergenic | 30.0% |
!!! | AGTTTTATTTTTCAAGGGAG+GGG | + | chr4.2:56028719-56028738 | None:intergenic | 30.0% |
!!! | ATATTTTAACATAAGAGGGG+AGG | - | chr4.2:56029329-56029348 | MS.gene064203:intron | 30.0% |
!!! | ATTTTAACTTAAGAGGGAAG+CGG | + | chr4.2:56028689-56028708 | None:intergenic | 30.0% |
!!! | CTGTGGTTTTTGTTTTTAAG+TGG | - | chr4.2:56028148-56028167 | MS.gene064203:intron | 30.0% |
!!! | TATAACTTGCTTGGTTTTTG+CGG | - | chr4.2:56030793-56030812 | MS.gene064203:CDS | 30.0% |
!!! | TATTTTAACATAAGAGGGGA+GGG | - | chr4.2:56029330-56029349 | MS.gene064203:intron | 30.0% |
AAAAAATGAGCGATACGTGT+CGG | + | chr4.2:56027413-56027432 | None:intergenic | 35.0% | |
AAAGGATATTGCAGAAAGAG+CGG | - | chr4.2:56029543-56029562 | MS.gene064203:intron | 35.0% | |
AAATATAATCAGCAGACAGC+AGG | - | chr4.2:56026703-56026722 | MS.gene064203:intron | 35.0% | |
AACCAATTTGGAAACGGAAT+TGG | + | chr4.2:56024812-56024831 | None:intergenic | 35.0% | |
AACTTTGTCTCAGAAACAGT+TGG | + | chr4.2:56027864-56027883 | None:intergenic | 35.0% | |
AAGAACACTTAGCGAGATAA+CGG | - | chr4.2:56025586-56025605 | MS.gene064203:intron | 35.0% | |
AAGCCATGATACTCCAAAAA+TGG | + | chr4.2:56027620-56027639 | None:intergenic | 35.0% | |
ACAAGTAGAATCAATTCACG+AGG | - | chr4.2:56025338-56025357 | MS.gene064203:CDS | 35.0% | |
ACACTCATTCTAACCTGTAT+TGG | + | chr4.2:56028118-56028137 | None:intergenic | 35.0% | |
ACAGAGTAGAATTCAATCAG+TGG | - | chr4.2:56027172-56027191 | MS.gene064203:intron | 35.0% | |
AGAGAATAGCTATTGCTATG+TGG | - | chr4.2:56027208-56027227 | MS.gene064203:intron | 35.0% | |
AGATTCAGTCTTGAACTTCA+AGG | + | chr4.2:56030485-56030504 | None:intergenic | 35.0% | |
AGCATACATTAACGCATTGA+AGG | - | chr4.2:56028082-56028101 | MS.gene064203:intron | 35.0% | |
ATACCGATACGATACCAATA+CGG | - | chr4.2:56026802-56026821 | MS.gene064203:intron | 35.0% | |
ATATGACTATCATCAGTCTG+TGG | - | chr4.2:56030081-56030100 | MS.gene064203:intron | 35.0% | |
CACTCATTCTAACCTGTATT+GGG | + | chr4.2:56028117-56028136 | None:intergenic | 35.0% | |
CTAACTCAAGAAGACGAAAA+AGG | + | chr4.2:56029612-56029631 | None:intergenic | 35.0% | |
CTCTAGATGAAAACTCAATC+AGG | + | chr4.2:56029501-56029520 | None:intergenic | 35.0% | |
CTTATGATGTTCTCTTTGGA+TGG | + | chr4.2:56027044-56027063 | None:intergenic | 35.0% | |
GAGCAAATACAGGATCATAA+CGG | + | chr4.2:56027989-56028008 | None:intergenic | 35.0% | |
GAGGCCATTTCAAAATGTTT+GGG | - | chr4.2:56030899-56030918 | MS.gene064203:CDS | 35.0% | |
GATGCTCCAATAAAATACAC+TGG | - | chr4.2:56026185-56026204 | MS.gene064203:intron | 35.0% | |
GATTCAGTCTTGAACTTCAA+GGG | + | chr4.2:56030484-56030503 | None:intergenic | 35.0% | |
GTTAATGTATGCTTGGAAGA+TGG | + | chr4.2:56028075-56028094 | None:intergenic | 35.0% | |
TATAGTCGTTTCTTTGCAGT+AGG | - | chr4.2:56029586-56029605 | MS.gene064203:intron | 35.0% | |
TATATGACCAACTCATGGAA+GGG | - | chr4.2:56028024-56028043 | MS.gene064203:intron | 35.0% | |
TATGATCCTGTATTTGCTCT+TGG | - | chr4.2:56027990-56028009 | MS.gene064203:intron | 35.0% | |
TCAATGCGTTAATGTATGCT+TGG | + | chr4.2:56028082-56028101 | None:intergenic | 35.0% | |
TCGTAATTCAAGCATCACAT+GGG | + | chr4.2:56028755-56028774 | None:intergenic | 35.0% | |
TCTTGAGTTAGCAAATGCAA+TGG | - | chr4.2:56029621-56029640 | MS.gene064203:intron | 35.0% | |
TGAGAAAGAAGAAGTTACTG+CGG | + | chr4.2:56024659-56024678 | None:intergenic | 35.0% | |
TGAGGCCATTTCAAAATGTT+TGG | - | chr4.2:56030898-56030917 | MS.gene064203:CDS | 35.0% | |
TGCTAAAGGAATACATTGAC+AGG | - | chr4.2:56030311-56030330 | MS.gene064203:intron | 35.0% | |
TGTATCTCATCAAATGTTGC+TGG | + | chr4.2:56027956-56027975 | None:intergenic | 35.0% | |
TTCCAATTCCGTTTCCAAAT+TGG | - | chr4.2:56024807-56024826 | MS.gene064203:intron | 35.0% | |
! | GGTATCAATCCACAGAATTT+TGG | + | chr4.2:56026597-56026616 | None:intergenic | 35.0% |
! | TAAGACAGAAGTATAGGTGT+CGG | - | chr4.2:56027348-56027367 | MS.gene064203:intron | 35.0% |
! | TGATTCTACTTGTTGAAGCT+AGG | + | chr4.2:56025331-56025350 | None:intergenic | 35.0% |
! | TGCAATGGAACCAACAATTT+TGG | - | chr4.2:56029636-56029655 | MS.gene064203:intron | 35.0% |
! | TGTGATTTGTGAATCACTCT+TGG | - | chr4.2:56028373-56028392 | MS.gene064203:intron | 35.0% |
! | TTATCAATCTCAGATAACGG+AGG | - | chr4.2:56025548-56025567 | MS.gene064203:intron | 35.0% |
!! | AATTTGTAGCTCTGATTGAG+TGG | + | chr4.2:56028328-56028347 | None:intergenic | 35.0% |
!! | ACAGTCAACTCACTTTTAGT+CGG | + | chr4.2:56025213-56025232 | None:intergenic | 35.0% |
!! | AGATTTTAACATAAGAGGGG+TGG | - | chr4.2:56029226-56029245 | MS.gene064203:intron | 35.0% |
!! | AGTTTTTCAGTTCAGGGTTT+AGG | - | chr4.2:56030618-56030637 | MS.gene064203:intron | 35.0% |
!! | ATTCAAGATTCTTTTAGGGG+AGG | + | chr4.2:56028661-56028680 | None:intergenic | 35.0% |
!! | ATTTGTAGCTCTGATTGAGT+GGG | + | chr4.2:56028327-56028346 | None:intergenic | 35.0% |
!! | ATTTTAACATAAGAGGGGAG+GGG | - | chr4.2:56029331-56029350 | MS.gene064203:intron | 35.0% |
!! | GATTTTAACATAAGAGGGGT+GGG | - | chr4.2:56029227-56029246 | MS.gene064203:intron | 35.0% |
!! | GGAACCAACAATTTTGGAAA+AGG | - | chr4.2:56029642-56029661 | MS.gene064203:intron | 35.0% |
!! | TATCAATCTCAGATAACGGA+GGG | - | chr4.2:56025549-56025568 | MS.gene064203:intron | 35.0% |
!! | TTGAGTTGAACATTTGGTGT+AGG | + | chr4.2:56028176-56028195 | None:intergenic | 35.0% |
!!! | ATTCTAGCTTTTTTTAGGGG+TGG | - | chr4.2:56029257-56029276 | MS.gene064203:intron | 35.0% |
!!! | TCACCATTTTTGGAGTATCA+TGG | - | chr4.2:56027614-56027633 | MS.gene064203:CDS | 35.0% |
!!! | TTCTAGCTTTTTTTAGGGGT+GGG | - | chr4.2:56029258-56029277 | MS.gene064203:intron | 35.0% |
AAACAATGACCGATACGTGT+CGG | + | chr4.2:56027496-56027515 | None:intergenic | 40.0% | |
AAACCGAACTGCATCTGAAT+CGG | + | chr4.2:56024749-56024768 | None:intergenic | 40.0% | |
AAAGAAGCGAGTGGAAGAAA+GGG | + | chr4.2:56024722-56024741 | None:intergenic | 40.0% | |
AAGGAGAATGCTGCATTCAT+CGG | - | chr4.2:56029989-56030008 | MS.gene064203:intron | 40.0% | |
AAGGATATTGCAGAAAGAGC+GGG | - | chr4.2:56029544-56029563 | MS.gene064203:intron | 40.0% | |
ACAAAGCCAAGAGCAAATAC+AGG | + | chr4.2:56027999-56028018 | None:intergenic | 40.0% | |
ACAAGCTAAAGAGCTGCTAA+AGG | - | chr4.2:56030297-56030316 | MS.gene064203:intron | 40.0% | |
AGAAGTTGAGGGGACTTTAA+AGG | - | chr4.2:56029525-56029544 | MS.gene064203:intron | 40.0% | |
AGCACGGAGTTATAGATACT+AGG | + | chr4.2:56027918-56027937 | None:intergenic | 40.0% | |
AGCATATCTTTGCGCTATGT+TGG | - | chr4.2:56024775-56024794 | MS.gene064203:intron | 40.0% | |
AGGATCATGTGTTTGATGCT+TGG | - | chr4.2:56025033-56025052 | MS.gene064203:intron | 40.0% | |
ATAGAACACACACACATCTC+AGG | - | chr4.2:56026023-56026042 | MS.gene064203:CDS | 40.0% | |
ATCTAGAGAAGGAGAAGTTG+AGG | - | chr4.2:56029513-56029532 | MS.gene064203:intron | 40.0% | |
ATGCACAGAAGTTAGAAGAG+TGG | - | chr4.2:56029452-56029471 | MS.gene064203:intron | 40.0% | |
ATGTTCAGGCTTCATTAGAG+GGG | - | chr4.2:56029879-56029898 | MS.gene064203:intron | 40.0% | |
CACTGTATATGACCAACTCA+TGG | - | chr4.2:56028019-56028038 | MS.gene064203:intron | 40.0% | |
CAGTCTATGGTGACTTTCTA+TGG | + | chr4.2:56028225-56028244 | None:intergenic | 40.0% | |
CATGTTCAGGCTTCATTAGA+GGG | - | chr4.2:56029878-56029897 | MS.gene064203:intron | 40.0% | |
CCGAACAACCAATTTGGAAA+CGG | + | chr4.2:56024818-56024837 | None:intergenic | 40.0% | |
CCGTTTCCAAATTGGTTGTT+CGG | - | chr4.2:56024815-56024834 | MS.gene064203:intron | 40.0% | |
CCTTATATGCTTGAGCTTTG+CGG | - | chr4.2:56025513-56025532 | MS.gene064203:intron | 40.0% | |
CGTAATTCAAGCATCACATG+GGG | + | chr4.2:56028754-56028773 | None:intergenic | 40.0% | |
CTAGTGATATACTGAGCACT+TGG | - | chr4.2:56030695-56030714 | MS.gene064203:intron | 40.0% | |
CTTTCATACATGACAGAGTG+TGG | - | chr4.2:56026677-56026696 | MS.gene064203:intron | 40.0% | |
GGAGTATAAGTAAGCTGTGT+CGG | - | chr4.2:56027369-56027388 | MS.gene064203:intron | 40.0% | |
GTAATTCAAGCATCACATGG+GGG | + | chr4.2:56028753-56028772 | None:intergenic | 40.0% | |
GTACTGAGTTCAAACAACCT+CGG | - | chr4.2:56026367-56026386 | MS.gene064203:intron | 40.0% | |
GTATATGACCAACTCATGGA+AGG | - | chr4.2:56028023-56028042 | MS.gene064203:intron | 40.0% | |
GTCGTAATTCAAGCATCACA+TGG | + | chr4.2:56028756-56028775 | None:intergenic | 40.0% | |
TAAAATGCACAAGAGGGACT+TGG | - | chr4.2:56026113-56026132 | MS.gene064203:CDS | 40.0% | |
TACTGAGTTCAAACAACCTC+GGG | - | chr4.2:56026368-56026387 | MS.gene064203:intron | 40.0% | |
TATCTATAACTCCGTGCTAC+AGG | - | chr4.2:56027920-56027939 | MS.gene064203:intron | 40.0% | |
TCGCAATCTGCTTTCTAAGT+TGG | - | chr4.2:56030273-56030292 | MS.gene064203:intron | 40.0% | |
TCTAGAGAAGGAGAAGTTGA+GGG | - | chr4.2:56029514-56029533 | MS.gene064203:intron | 40.0% | |
TGAACCACAAAAGGCTAATG+AGG | - | chr4.2:56030880-56030899 | MS.gene064203:CDS | 40.0% | |
TGAGTGTTTGTATGTCTCTG+TGG | - | chr4.2:56028131-56028150 | MS.gene064203:intron | 40.0% | |
TGCACAGAAGTTAGAAGAGT+GGG | - | chr4.2:56029453-56029472 | MS.gene064203:intron | 40.0% | |
TGGAATGATCGCTTACTTCA+GGG | - | chr4.2:56030832-56030851 | MS.gene064203:CDS | 40.0% | |
TGTTTGAACTCAGTACCTTG+AGG | + | chr4.2:56026363-56026382 | None:intergenic | 40.0% | |
TTGGAATGATCGCTTACTTC+AGG | - | chr4.2:56030831-56030850 | MS.gene064203:CDS | 40.0% | |
TTGTCTCAGAAACAGTTGGA+GGG | + | chr4.2:56027860-56027879 | None:intergenic | 40.0% | |
TTTCAAACCTGACACAGAAG+AGG | + | chr4.2:56024845-56024864 | None:intergenic | 40.0% | |
TTTGTCTCAGAAACAGTTGG+AGG | + | chr4.2:56027861-56027880 | None:intergenic | 40.0% | |
! | AAGTCCCTCTTGTGCATTTT+AGG | + | chr4.2:56026114-56026133 | None:intergenic | 40.0% |
! | AATTTTTGCCCCTCTACAAG+TGG | - | chr4.2:56025403-56025422 | MS.gene064203:intron | 40.0% |
! | ACTTTTCCGATACGCGTATT+GGG | - | chr4.2:56027545-56027564 | MS.gene064203:CDS | 40.0% |
! | ATGTTTGGTTCCACTTGTAG+AGG | + | chr4.2:56025416-56025435 | None:intergenic | 40.0% |
! | ATGTTTTGCATAAGAGGGCA+GGG | - | chr4.2:56029300-56029319 | MS.gene064203:intron | 40.0% |
! | GATCTCTCTTTTCCATGTTC+AGG | - | chr4.2:56029865-56029884 | MS.gene064203:intron | 40.0% |
! | TACGCGTATCGGAAAAGTAT+CGG | + | chr4.2:56027543-56027562 | None:intergenic | 40.0% |
! | TACTTTTCCGATACGCGTAT+TGG | - | chr4.2:56027544-56027563 | MS.gene064203:CDS | 40.0% |
! | TATGTTTTGCATAAGAGGGC+AGG | - | chr4.2:56029299-56029318 | MS.gene064203:intron | 40.0% |
! | TGTTTGGTTCCACTTGTAGA+GGG | + | chr4.2:56025415-56025434 | None:intergenic | 40.0% |
! | TTTTCGACCCCAAAATTCTG+TGG | - | chr4.2:56026585-56026604 | MS.gene064203:intron | 40.0% |
!! | AGTTTAGCCTTGTAACCTCA+AGG | - | chr4.2:56026345-56026364 | MS.gene064203:intron | 40.0% |
!!! | TCTAGCTTTTTTTAGGGGTG+GGG | - | chr4.2:56029259-56029278 | MS.gene064203:intron | 40.0% |
AAATGTTGACGAGTGTCCCA+GGG | + | chr4.2:56025935-56025954 | None:intergenic | 45.0% | |
AAATTCCCGTATCGCCGTAT+TGG | + | chr4.2:56026819-56026838 | None:intergenic | 45.0% | |
ACGATACCAATACGGCGATA+CGG | - | chr4.2:56026810-56026829 | MS.gene064203:intron | 45.0% | |
ACTGAGTTCAAACAACCTCG+GGG | - | chr4.2:56026369-56026388 | MS.gene064203:intron | 45.0% | |
AGAAAGGGCTGAACCACAAA+AGG | - | chr4.2:56030871-56030890 | MS.gene064203:CDS | 45.0% | |
AGGTGCCTAAAATGCACAAG+AGG | - | chr4.2:56026106-56026125 | MS.gene064203:CDS | 45.0% | |
ATACGCGTATTGGGACGTAT+TGG | - | chr4.2:56027554-56027573 | MS.gene064203:CDS | 45.0% | |
ATACGTCCCAATACGCGTAT+CGG | + | chr4.2:56027554-56027573 | None:intergenic | 45.0% | |
ATACGTTCCGATACGCGTAT+CGG | + | chr4.2:56027473-56027492 | None:intergenic | 45.0% | |
ATCGGTATCGTGTCAGGTAT+CGG | + | chr4.2:56026790-56026809 | None:intergenic | 45.0% | |
CAAAGAAGCGAGTGGAAGAA+AGG | + | chr4.2:56024723-56024742 | None:intergenic | 45.0% | |
CACTCACTCAATCTTCTCAG+AGG | - | chr4.2:56024686-56024705 | MS.gene064203:CDS | 45.0% | |
CATTCTAACCTGTATTGGGC+TGG | + | chr4.2:56028113-56028132 | None:intergenic | 45.0% | |
CCATGTTCAGGCTTCATTAG+AGG | - | chr4.2:56029877-56029896 | MS.gene064203:intron | 45.0% | |
CCGCAAAGCTCAAGCATATA+AGG | + | chr4.2:56025516-56025535 | None:intergenic | 45.0% | |
CCTCTAATGAAGCCTGAACA+TGG | + | chr4.2:56029880-56029899 | None:intergenic | 45.0% | |
CGCACACAAATTGCTGGTAA+AGG | - | chr4.2:56030028-56030047 | MS.gene064203:intron | 45.0% | |
CTAGAGAAGGAGAAGTTGAG+GGG | - | chr4.2:56029515-56029534 | MS.gene064203:intron | 45.0% | |
CTCAGGGACACAACAAAAGT+TGG | + | chr4.2:56026618-56026637 | None:intergenic | 45.0% | |
CTCAGTACCTTGAGGTTACA+AGG | + | chr4.2:56026355-56026374 | None:intergenic | 45.0% | |
CTCTGATTGAGTGGGATTTG+GGG | + | chr4.2:56028319-56028338 | None:intergenic | 45.0% | |
CTTTCTTCCACTCGCTTCTT+TGG | - | chr4.2:56024721-56024740 | MS.gene064203:CDS | 45.0% | |
GCATCTCTATCCTCATCACT+AGG | + | chr4.2:56028053-56028072 | None:intergenic | 45.0% | |
GCTCTGATTGAGTGGGATTT+GGG | + | chr4.2:56028320-56028339 | None:intergenic | 45.0% | |
GGAACACCGAACAACCAATT+TGG | + | chr4.2:56024824-56024843 | None:intergenic | 45.0% | |
GGTGCCTAAAATGCACAAGA+GGG | - | chr4.2:56026107-56026126 | MS.gene064203:CDS | 45.0% | |
GTTCCGATTCAGATGCAGTT+CGG | - | chr4.2:56024743-56024762 | MS.gene064203:intron | 45.0% | |
TACGCGTATTGGGACGTATT+GGG | - | chr4.2:56027555-56027574 | MS.gene064203:CDS | 45.0% | |
TACTTCTCCGATACGCGTAT+CGG | - | chr4.2:56027463-56027482 | MS.gene064203:intron | 45.0% | |
TAGGATACCCTTCCATGAGT+TGG | + | chr4.2:56028034-56028053 | None:intergenic | 45.0% | |
TGATATACTGAGCACTTGGC+AGG | - | chr4.2:56030699-56030718 | MS.gene064203:intron | 45.0% | |
TGGGGTTCCGAAATCATGTT+TGG | + | chr4.2:56028301-56028320 | None:intergenic | 45.0% | |
TTAGGACGCACACAAATTGC+TGG | - | chr4.2:56030022-56030041 | MS.gene064203:intron | 45.0% | |
! | ACACTGGCCTATATAGAGCA+TGG | - | chr4.2:56026201-56026220 | MS.gene064203:intron | 45.0% |
! | AGCTCTGATTGAGTGGGATT+TGG | + | chr4.2:56028321-56028340 | None:intergenic | 45.0% |
! | CATGTTTGGTTGCTTTCGAG+TGG | + | chr4.2:56025375-56025394 | None:intergenic | 45.0% |
! | GTTTGGTTCCACTTGTAGAG+GGG | + | chr4.2:56025414-56025433 | None:intergenic | 45.0% |
! | TACGCGTATCGGAGAAGTAT+CGG | + | chr4.2:56027462-56027481 | None:intergenic | 45.0% |
! | TATCGGTATCGGATACGTGT+CGG | - | chr4.2:56027581-56027600 | MS.gene064203:CDS | 45.0% |
! | TATCGTATCGGTATCGTGTC+AGG | + | chr4.2:56026796-56026815 | None:intergenic | 45.0% |
! | TCGCCGTATTGGTATCGTAT+CGG | + | chr4.2:56026808-56026827 | None:intergenic | 45.0% |
! | TCGCTAAGTGTTCTTGCTGT+CGG | + | chr4.2:56025581-56025600 | None:intergenic | 45.0% |
! | TGGAGTATCATGGCTTCAGA+GGG | - | chr4.2:56027624-56027643 | MS.gene064203:CDS | 45.0% |
! | TGTTTTGCATAAGAGGGCAG+GGG | - | chr4.2:56029301-56029320 | MS.gene064203:intron | 45.0% |
! | TTGGAGTATCATGGCTTCAG+AGG | - | chr4.2:56027623-56027642 | MS.gene064203:CDS | 45.0% |
!! | ACGCGTATCGGAAAAGTATC+GGG | + | chr4.2:56027542-56027561 | None:intergenic | 45.0% |
!!! | ATGGCCTCATTAGCCTTTTG+TGG | + | chr4.2:56030887-56030906 | None:intergenic | 45.0% |
!!! | GCGGCTGGATTTTGATTCTT+TGG | - | chr4.2:56030812-56030831 | MS.gene064203:CDS | 45.0% |
!! | AAATAAAAAAAACTTATTAA+GGG | - | chr4.2:56029193-56029212 | MS.gene064203:intron | 5.0% |
!! | AGTAAAAATTATAAAATAAA+GGG | + | chr4.2:56025629-56025648 | None:intergenic | 5.0% |
!!! | ATATTTTAAAATTTATAGTA+AGG | - | chr4.2:56029029-56029048 | MS.gene064203:intron | 5.0% |
AATGTTGACGAGTGTCCCAG+GGG | + | chr4.2:56025934-56025953 | None:intergenic | 50.0% | |
ACGCGTATTGGGACGTATTG+GGG | - | chr4.2:56027556-56027575 | MS.gene064203:CDS | 50.0% | |
AGAAAGAGCGGGTGGAAATG+GGG | - | chr4.2:56029555-56029574 | MS.gene064203:intron | 50.0% | |
AGGAAGATCCAGCCCAATAC+AGG | - | chr4.2:56028102-56028121 | MS.gene064203:intron | 50.0% | |
ATCGGAACCAAAGAAGCGAG+TGG | + | chr4.2:56024731-56024750 | None:intergenic | 50.0% | |
CAGAAAGAGCGGGTGGAAAT+GGG | - | chr4.2:56029554-56029573 | MS.gene064203:intron | 50.0% | |
CGATACCAATACGGCGATAC+GGG | - | chr4.2:56026811-56026830 | MS.gene064203:intron | 50.0% | |
CTGAGTTCAAACAACCTCGG+GGG | - | chr4.2:56026370-56026389 | MS.gene064203:intron | 50.0% | |
CTTGTTAACGAGTGTCCCCT+GGG | - | chr4.2:56025744-56025763 | MS.gene064203:intron | 50.0% | |
GAAATGTTGACGAGTGTCCC+AGG | + | chr4.2:56025936-56025955 | None:intergenic | 50.0% | |
GACAATGAGCTCCTGTAGCA+CGG | + | chr4.2:56027934-56027953 | None:intergenic | 50.0% | |
GATATTGCAGAAAGAGCGGG+TGG | - | chr4.2:56029547-56029566 | MS.gene064203:intron | 50.0% | |
GCACTTGGCAGGTTATAGTC+AGG | - | chr4.2:56030710-56030729 | MS.gene064203:intron | 50.0% | |
GGAACGTATCCGACACGTAT+CGG | - | chr4.2:56027484-56027503 | MS.gene064203:CDS | 50.0% | |
GTATCGAGGCCGTATCGTAT+CGG | + | chr4.2:56026853-56026872 | None:intergenic | 50.0% | |
TATCGAGGCCGTATCGTATC+GGG | + | chr4.2:56026852-56026871 | None:intergenic | 50.0% | |
TCGGTATCGTGTCAGGTATC+GGG | + | chr4.2:56026789-56026808 | None:intergenic | 50.0% | |
TCTGTGCATCTACTCTGCAG+AGG | + | chr4.2:56029441-56029460 | None:intergenic | 50.0% | |
TCTTGTTAACGAGTGTCCCC+TGG | - | chr4.2:56025743-56025762 | MS.gene064203:intron | 50.0% | |
TTGTTAACGAGTGTCCCCTG+GGG | - | chr4.2:56025745-56025764 | MS.gene064203:intron | 50.0% | |
! | GGAGTATCATGGCTTCAGAG+GGG | - | chr4.2:56027625-56027644 | MS.gene064203:CDS | 50.0% |
! | GTATTGGGGCGTATCGGTAT+CGG | - | chr4.2:56027570-56027589 | MS.gene064203:CDS | 50.0% |
!! | AAGTGCTTAAAGAGTGCCCC+TGG | - | chr4.2:56025915-56025934 | MS.gene064203:intron | 50.0% |
!! | ACGCGTATCGGAGAAGTATC+GGG | + | chr4.2:56027461-56027480 | None:intergenic | 50.0% |
!! | ACTTGCTTGGTTTTTGCGGC+TGG | - | chr4.2:56030797-56030816 | MS.gene064203:CDS | 50.0% |
!! | AGTGCTTAAAGAGTGCCCCT+GGG | - | chr4.2:56025916-56025935 | MS.gene064203:intron | 50.0% |
!! | CGACTTGCTATTTGTGCGAG+TGG | - | chr4.2:56026136-56026155 | MS.gene064203:CDS | 50.0% |
!! | GGAAGGGTATCCTAGTGATG+AGG | - | chr4.2:56028040-56028059 | MS.gene064203:intron | 50.0% |
AGTTCAAACAACCTCGGGGG+CGG | - | chr4.2:56026373-56026392 | MS.gene064203:intron | 55.0% | |
CGGTGTTCCTCTTCTGTGTC+AGG | - | chr4.2:56024835-56024854 | MS.gene064203:intron | 55.0% | |
GAAGCGAGTGGAAGAAAGGG+TGG | + | chr4.2:56024719-56024738 | None:intergenic | 55.0% | |
GCAGAAAGAGCGGGTGGAAA+TGG | - | chr4.2:56029553-56029572 | MS.gene064203:intron | 55.0% | |
TCAGCAGACAGCAGGTGATG+CGG | - | chr4.2:56026711-56026730 | MS.gene064203:intron | 55.0% | |
TGGGACGTATTGGGGCGTAT+CGG | - | chr4.2:56027564-56027583 | MS.gene064203:CDS | 55.0% | |
! | CGGTATCGTGTCAGGTATCG+GGG | + | chr4.2:56026788-56026807 | None:intergenic | 55.0% |
!! | ATCCTCAAAGAGTGCCCCAG+GGG | + | chr4.2:56025762-56025781 | None:intergenic | 55.0% |
!! | GATCCTCAAAGAGTGCCCCA+GGG | + | chr4.2:56025763-56025782 | None:intergenic | 55.0% |
CCTCGGGGGCGGTTGTAAAA+TGG | - | chr4.2:56026384-56026403 | MS.gene064203:intron | 60.0% | |
! | CCATTTTACAACCGCCCCCG+AGG | + | chr4.2:56026387-56026406 | None:intergenic | 60.0% |
!! | GGATCCTCAAAGAGTGCCCC+AGG | + | chr4.2:56025764-56025783 | None:intergenic | 60.0% |
! | GTCCCCTGGGGCACTCTTTG+AGG | - | chr4.2:56025757-56025776 | MS.gene064203:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 56024652 | 56030955 | 56024652 | ID=MS.gene064203 |
chr4.2 | mRNA | 56024652 | 56030955 | 56024652 | ID=MS.gene064203.t1;Parent=MS.gene064203 |
chr4.2 | exon | 56030751 | 56030955 | 56030751 | ID=MS.gene064203.t1.exon1;Parent=MS.gene064203.t1 |
chr4.2 | CDS | 56030751 | 56030955 | 56030751 | ID=cds.MS.gene064203.t1;Parent=MS.gene064203.t1 |
chr4.2 | exon | 56027484 | 56027751 | 56027484 | ID=MS.gene064203.t1.exon2;Parent=MS.gene064203.t1 |
chr4.2 | CDS | 56027484 | 56027751 | 56027484 | ID=cds.MS.gene064203.t1;Parent=MS.gene064203.t1 |
chr4.2 | exon | 56025944 | 56026160 | 56025944 | ID=MS.gene064203.t1.exon3;Parent=MS.gene064203.t1 |
chr4.2 | CDS | 56025944 | 56026160 | 56025944 | ID=cds.MS.gene064203.t1;Parent=MS.gene064203.t1 |
chr4.2 | exon | 56025275 | 56025390 | 56025275 | ID=MS.gene064203.t1.exon4;Parent=MS.gene064203.t1 |
chr4.2 | CDS | 56025275 | 56025390 | 56025275 | ID=cds.MS.gene064203.t1;Parent=MS.gene064203.t1 |
chr4.2 | exon | 56024652 | 56024754 | 56024652 | ID=MS.gene064203.t1.exon5;Parent=MS.gene064203.t1 |
chr4.2 | CDS | 56024652 | 56024754 | 56024652 | ID=cds.MS.gene064203.t1;Parent=MS.gene064203.t1 |
Gene Sequence |
Protein sequence |