Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066196.t1 | XP_013464278.1 | 98.4 | 318 | 5 | 0 | 10 | 327 | 30 | 347 | 4.90E-178 | 633.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066196.t1 | Q9SLK2 | 75.6 | 320 | 76 | 2 | 10 | 328 | 31 | 349 | 3.1e-136 | 486.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066196.t1 | A0A072VAB2 | 98.4 | 318 | 5 | 0 | 10 | 327 | 30 | 347 | 3.6e-178 | 633.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene066196 | 0.836657 | 8.23E-57 | -1.69E-46 |
| MS.gene049227 | MS.gene066196 | 0.849616 | 2.88E-60 | -1.69E-46 |
| MS.gene049350 | MS.gene066196 | 0.840658 | 7.62E-58 | -1.69E-46 |
| MS.gene049711 | MS.gene066196 | 0.880788 | 4.11E-70 | -1.69E-46 |
| MS.gene049807 | MS.gene066196 | 0.891014 | 5.84E-74 | -1.69E-46 |
| MS.gene049824 | MS.gene066196 | 0.813104 | 3.03E-51 | -1.69E-46 |
| MS.gene050224 | MS.gene066196 | 0.823878 | 1.09E-53 | -1.69E-46 |
| MS.gene050238 | MS.gene066196 | 0.812258 | 4.64E-51 | -1.69E-46 |
| MS.gene050258 | MS.gene066196 | 0.81301 | 3.18E-51 | -1.69E-46 |
| MS.gene050559 | MS.gene066196 | 0.834157 | 3.52E-56 | -1.69E-46 |
| MS.gene050561 | MS.gene066196 | 0.827583 | 1.44E-54 | -1.69E-46 |
| MS.gene050562 | MS.gene066196 | 0.834643 | 2.66E-56 | -1.69E-46 |
| MS.gene050657 | MS.gene066196 | 0.800639 | 1.31E-48 | -1.69E-46 |
| MS.gene051021 | MS.gene066196 | 0.837806 | 4.18E-57 | -1.69E-46 |
| MS.gene051201 | MS.gene066196 | 0.837078 | 6.43E-57 | -1.69E-46 |
| MS.gene051234 | MS.gene066196 | 0.819977 | 8.75E-53 | -1.69E-46 |
| MS.gene051279 | MS.gene066196 | 0.856095 | 4.05E-62 | -1.69E-46 |
| MS.gene051648 | MS.gene066196 | 0.805817 | 1.11E-49 | -1.69E-46 |
| MS.gene051719 | MS.gene066196 | 0.816222 | 6.18E-52 | -1.69E-46 |
| MS.gene051720 | MS.gene066196 | 0.837687 | 4.49E-57 | -1.69E-46 |
| MS.gene051744 | MS.gene066196 | 0.835127 | 2.01E-56 | -1.69E-46 |
| MS.gene051885 | MS.gene066196 | 0.804133 | 2.50E-49 | -1.69E-46 |
| MS.gene052016 | MS.gene066196 | 0.81421 | 1.73E-51 | -1.69E-46 |
| MS.gene052155 | MS.gene066196 | -0.80883 | 2.55E-50 | -1.69E-46 |
| MS.gene052307 | MS.gene066196 | 0.845336 | 4.33E-59 | -1.69E-46 |
| MS.gene052335 | MS.gene066196 | 0.801149 | 1.03E-48 | -1.69E-46 |
| MS.gene052463 | MS.gene066196 | 0.847572 | 1.06E-59 | -1.69E-46 |
| MS.gene052514 | MS.gene066196 | 0.829779 | 4.25E-55 | -1.69E-46 |
| MS.gene052516 | MS.gene066196 | 0.83688 | 7.22E-57 | -1.69E-46 |
| MS.gene052533 | MS.gene066196 | 0.846041 | 2.79E-59 | -1.69E-46 |
| MS.gene052609 | MS.gene066196 | 0.849021 | 4.22E-60 | -1.69E-46 |
| MS.gene052732 | MS.gene066196 | 0.820536 | 6.51E-53 | -1.69E-46 |
| MS.gene053079 | MS.gene066196 | 0.808084 | 3.68E-50 | -1.69E-46 |
| MS.gene053143 | MS.gene066196 | 0.857479 | 1.59E-62 | -1.69E-46 |
| MS.gene053144 | MS.gene066196 | 0.882224 | 1.25E-70 | -1.69E-46 |
| MS.gene053171 | MS.gene066196 | 0.820941 | 5.26E-53 | -1.69E-46 |
| MS.gene053226 | MS.gene066196 | 0.812898 | 3.36E-51 | -1.69E-46 |
| MS.gene053536 | MS.gene066196 | 0.854339 | 1.31E-61 | -1.69E-46 |
| MS.gene053538 | MS.gene066196 | 0.852189 | 5.44E-61 | -1.69E-46 |
| MS.gene053581 | MS.gene066196 | 0.837711 | 4.43E-57 | -1.69E-46 |
| MS.gene053599 | MS.gene066196 | 0.805903 | 1.07E-49 | -1.69E-46 |
| MS.gene053678 | MS.gene066196 | 0.809774 | 1.60E-50 | -1.69E-46 |
| MS.gene053945 | MS.gene066196 | 0.816467 | 5.45E-52 | -1.69E-46 |
| MS.gene054178 | MS.gene066196 | 0.803093 | 4.11E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene066196 | 0.828332 | 9.54E-55 | -1.69E-46 |
| MS.gene054584 | MS.gene066196 | 0.871286 | 7.67E-67 | -1.69E-46 |
| MS.gene05458 | MS.gene066196 | 0.803832 | 2.89E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene066196 | 0.801261 | 9.79E-49 | -1.69E-46 |
| MS.gene054824 | MS.gene066196 | 0.809172 | 2.16E-50 | -1.69E-46 |
| MS.gene055083 | MS.gene066196 | 0.810993 | 8.74E-51 | -1.69E-46 |
| MS.gene055141 | MS.gene066196 | 0.825476 | 4.59E-54 | -1.69E-46 |
| MS.gene055144 | MS.gene066196 | 0.807781 | 4.27E-50 | -1.69E-46 |
| MS.gene055221 | MS.gene066196 | 0.804708 | 1.90E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene066196 | 0.832808 | 7.65E-56 | -1.69E-46 |
| MS.gene055466 | MS.gene066196 | 0.805734 | 1.16E-49 | -1.69E-46 |
| MS.gene055469 | MS.gene066196 | 0.814312 | 1.64E-51 | -1.69E-46 |
| MS.gene055513 | MS.gene066196 | 0.816682 | 4.88E-52 | -1.69E-46 |
| MS.gene055537 | MS.gene066196 | 0.855984 | 4.37E-62 | -1.69E-46 |
| MS.gene055580 | MS.gene066196 | -0.828145 | 1.06E-54 | -1.69E-46 |
| MS.gene05574 | MS.gene066196 | 0.832522 | 9.01E-56 | -1.69E-46 |
| MS.gene055891 | MS.gene066196 | 0.814949 | 1.19E-51 | -1.69E-46 |
| MS.gene056043 | MS.gene066196 | -0.815618 | 8.43E-52 | -1.69E-46 |
| MS.gene056082 | MS.gene066196 | 0.801954 | 7.06E-49 | -1.69E-46 |
| MS.gene056308 | MS.gene066196 | 0.821413 | 4.09E-53 | -1.69E-46 |
| MS.gene056396 | MS.gene066196 | 0.815774 | 7.78E-52 | -1.69E-46 |
| MS.gene056507 | MS.gene066196 | 0.811877 | 5.62E-51 | -1.69E-46 |
| MS.gene056677 | MS.gene066196 | 0.853611 | 2.13E-61 | -1.69E-46 |
| MS.gene05686 | MS.gene066196 | 0.856766 | 2.58E-62 | -1.69E-46 |
| MS.gene057082 | MS.gene066196 | 0.829944 | 3.88E-55 | -1.69E-46 |
| MS.gene057102 | MS.gene066196 | 0.852843 | 3.54E-61 | -1.69E-46 |
| MS.gene057132 | MS.gene066196 | 0.819753 | 9.84E-53 | -1.69E-46 |
| MS.gene057294 | MS.gene066196 | 0.808693 | 2.73E-50 | -1.69E-46 |
| MS.gene058149 | MS.gene066196 | 0.826572 | 2.52E-54 | -1.69E-46 |
| MS.gene058210 | MS.gene066196 | 0.809249 | 2.08E-50 | -1.69E-46 |
| MS.gene058339 | MS.gene066196 | 0.801046 | 1.08E-48 | -1.69E-46 |
| MS.gene058492 | MS.gene066196 | 0.84357 | 1.29E-58 | -1.69E-46 |
| MS.gene058649 | MS.gene066196 | 0.852775 | 3.70E-61 | -1.69E-46 |
| MS.gene058668 | MS.gene066196 | 0.857099 | 2.05E-62 | -1.69E-46 |
| MS.gene05894 | MS.gene066196 | 0.822895 | 1.85E-53 | -1.69E-46 |
| MS.gene059015 | MS.gene066196 | 0.808599 | 2.86E-50 | -1.69E-46 |
| MS.gene059170 | MS.gene066196 | 0.811342 | 7.34E-51 | -1.69E-46 |
| MS.gene059424 | MS.gene066196 | 0.845536 | 3.82E-59 | -1.69E-46 |
| MS.gene059774 | MS.gene066196 | 0.832119 | 1.13E-55 | -1.69E-46 |
| MS.gene059778 | MS.gene066196 | 0.821501 | 3.90E-53 | -1.69E-46 |
| MS.gene05985 | MS.gene066196 | -0.807185 | 5.72E-50 | -1.69E-46 |
| MS.gene059965 | MS.gene066196 | 0.839611 | 1.43E-57 | -1.69E-46 |
| MS.gene060519 | MS.gene066196 | 0.822288 | 2.57E-53 | -1.69E-46 |
| MS.gene060697 | MS.gene066196 | 0.829244 | 5.74E-55 | -1.69E-46 |
| MS.gene061100 | MS.gene066196 | 0.837039 | 6.58E-57 | -1.69E-46 |
| MS.gene061188 | MS.gene066196 | 0.834055 | 3.74E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066196.t1 | MTR_2g067760 | 98.119 | 319 | 6 | 0 | 10 | 328 | 30 | 348 | 0.0 | 651 |
| MS.gene066196.t1 | MTR_2g101400 | 63.009 | 319 | 116 | 2 | 10 | 326 | 26 | 344 | 4.25e-150 | 426 |
| MS.gene066196.t1 | MTR_7g086110 | 64.174 | 321 | 112 | 3 | 7 | 324 | 1 | 321 | 9.67e-149 | 421 |
| MS.gene066196.t1 | MTR_2g451450 | 62.252 | 302 | 113 | 1 | 11 | 311 | 30 | 331 | 1.02e-138 | 396 |
| MS.gene066196.t1 | MTR_2g451450 | 65.789 | 228 | 78 | 0 | 96 | 323 | 1 | 228 | 5.59e-110 | 320 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066196.t1 | AT1G54320 | 75.625 | 320 | 76 | 2 | 10 | 328 | 31 | 349 | 1.08e-178 | 498 |
| MS.gene066196.t1 | AT1G79450 | 72.414 | 319 | 86 | 2 | 10 | 327 | 31 | 348 | 2.62e-172 | 482 |
| MS.gene066196.t1 | AT3G12740 | 73.125 | 320 | 84 | 2 | 10 | 328 | 32 | 350 | 1.07e-171 | 481 |
| MS.gene066196.t1 | AT1G16360 | 70.625 | 320 | 92 | 2 | 9 | 327 | 16 | 334 | 4.28e-171 | 478 |
| MS.gene066196.t1 | AT1G16360 | 70.846 | 319 | 91 | 2 | 10 | 327 | 31 | 348 | 4.32e-171 | 479 |
| MS.gene066196.t1 | AT1G16360 | 69.737 | 304 | 90 | 2 | 9 | 311 | 16 | 318 | 1.26e-158 | 447 |
| MS.gene066196.t1 | AT1G79450 | 72.826 | 276 | 73 | 2 | 53 | 327 | 7 | 281 | 6.52e-149 | 420 |
| MS.gene066196.t1 | AT5G46150 | 56.051 | 314 | 134 | 2 | 11 | 323 | 28 | 338 | 4.99e-129 | 372 |
| MS.gene066196.t1 | AT5G46150 | 56.051 | 314 | 134 | 2 | 11 | 323 | 28 | 338 | 4.99e-129 | 372 |
| MS.gene066196.t1 | AT5G46150 | 56.623 | 302 | 130 | 1 | 11 | 311 | 28 | 329 | 3.07e-127 | 367 |
| MS.gene066196.t1 | AT1G16360 | 65.072 | 209 | 71 | 2 | 9 | 216 | 16 | 223 | 6.81e-96 | 284 |
| MS.gene066196.t1 | AT1G16360 | 65.072 | 209 | 71 | 2 | 9 | 216 | 16 | 223 | 6.81e-96 | 284 |
| MS.gene066196.t1 | AT5G46150 | 54.854 | 206 | 92 | 1 | 11 | 215 | 28 | 233 | 1.22e-82 | 250 |
Find 67 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGGTTGTTGAAATTGTTTA+TGG | 0.247565 | 2.2:-25421700 | MS.gene066196:CDS |
| AGTGATAGGGAGCACAAATT+TGG | 0.303708 | 2.2:-25420193 | MS.gene066196:CDS |
| TTGCATACCGGCGATGATTC+TGG | 0.314059 | 2.2:+25421427 | None:intergenic |
| TATCGGAGTTGCTTCGCTAA+TGG | 0.328460 | 2.2:-25421824 | MS.gene066196:CDS |
| TGTCTCCCTGCAGGTTATTT+CGG | 0.333817 | 2.2:-25421878 | MS.gene066196:intron |
| CTGTTATTTGCAGTATCTTC+AGG | 0.335452 | 2.2:+25420325 | None:intergenic |
| TTCCAGAATGGTTCTATAAT+AGG | 0.338624 | 2.2:-25420148 | MS.gene066196:CDS |
| GCATCTCCTGGAAGAGTGAT+AGG | 0.345405 | 2.2:-25420207 | MS.gene066196:CDS |
| AGCTGATAGTATACATAAAT+AGG | 0.366101 | 2.2:+25421462 | None:intergenic |
| GTGCTCCCTATCACTCTTCC+AGG | 0.372048 | 2.2:+25420201 | None:intergenic |
| CACCTATTATAGAACCATTC+TGG | 0.379889 | 2.2:+25420146 | None:intergenic |
| CATCATATTTGTCATGGAAT+AGG | 0.380885 | 2.2:-25418184 | MS.gene066196:CDS |
| CTGAAGATACTGCAAATAAC+AGG | 0.383558 | 2.2:-25420324 | MS.gene066196:CDS |
| CCATATAACTTCCTAAAAGT+TGG | 0.396101 | 2.2:+25419689 | None:intergenic |
| AGGTTGTTGAAATTGTTTAT+GGG | 0.407143 | 2.2:-25421699 | MS.gene066196:CDS |
| TACCTTGTGGTCTCATAGCT+TGG | 0.407481 | 2.2:-25420294 | MS.gene066196:CDS |
| GGCATTGCTTATCTCACTGT+TGG | 0.409859 | 2.2:-25419527 | MS.gene066196:CDS |
| CGTCAAATTTGTATTGTTGA+CGG | 0.430499 | 2.2:+25420243 | None:intergenic |
| TATAACACATACAGTTTCAA+TGG | 0.439187 | 2.2:-25419608 | MS.gene066196:CDS |
| GTATGAGTCAGACTGCTTAC+CGG | 0.440324 | 2.2:-25421677 | MS.gene066196:CDS |
| TTCATTCTTTGTAGGCAACT+TGG | 0.442644 | 2.2:-25418212 | MS.gene066196:intron |
| ATTGCTTATCTCACTGTTGG+AGG | 0.447358 | 2.2:-25419524 | MS.gene066196:CDS |
| TTCGCTAATGGCTTCAAGAA+AGG | 0.457194 | 2.2:-25421812 | MS.gene066196:intron |
| CTACTACTAGCTGGCTTGGT+GGG | 0.464976 | 2.2:-25419565 | MS.gene066196:CDS |
| ACCGCTCGAGGTGTAAGAAT+AGG | 0.473978 | 2.2:+25422007 | None:intergenic |
| AATAGGTGATTTCATGTGCT+TGG | 0.475930 | 2.2:+25421479 | None:intergenic |
| CGTCAACAATACAAATTTGA+CGG | 0.477985 | 2.2:-25420242 | MS.gene066196:CDS |
| AGCAGGAGGATCTTATTGTC+TGG | 0.479332 | 2.2:-25419730 | MS.gene066196:CDS |
| TATGGAACAGTTGAATGAGC+AGG | 0.483440 | 2.2:-25419747 | MS.gene066196:intron |
| CTTACTGAGTTCTCTCCCTT+AGG | 0.490717 | 2.2:+25420358 | None:intergenic |
| CTATTCCATGACAAATATGA+TGG | 0.491865 | 2.2:+25418185 | None:intergenic |
| TAACTTCCTAAAAGTTGGTA+AGG | 0.500049 | 2.2:+25419694 | None:intergenic |
| TGAACAAGAAAGGCATCTCC+TGG | 0.500765 | 2.2:-25420219 | MS.gene066196:CDS |
| GTCGAAGTGATGAGCAATTG+AGG | 0.506813 | 2.2:-25420384 | MS.gene066196:CDS |
| ACCTCGTCTTTAGTGCCATC+CGG | 0.507629 | 2.2:+25421658 | None:intergenic |
| GAGATCCATCATATTTGTCA+TGG | 0.508248 | 2.2:-25418190 | MS.gene066196:CDS |
| GGTGGGAAGAATGATTTCCT+TGG | 0.509013 | 2.2:-25419548 | MS.gene066196:CDS |
| TTTCAAGTGTTACATCTATG+AGG | 0.517582 | 2.2:+25419636 | None:intergenic |
| ATAGAGGTGGATTTGAATCA+AGG | 0.521775 | 2.2:-25419662 | MS.gene066196:CDS |
| AGTGTTGTGTTCATTCCTAT+CGG | 0.524757 | 2.2:-25421841 | MS.gene066196:CDS |
| GAAGTTATATGGAAAGATAG+AGG | 0.534995 | 2.2:-25419678 | MS.gene066196:CDS |
| AATTTGACGGTGAACAAGAA+AGG | 0.544214 | 2.2:-25420229 | MS.gene066196:CDS |
| GTAAGAATAGGCTTGCAAGC+TGG | 0.553416 | 2.2:+25422019 | None:intergenic |
| CTGTCTACTACTAGCTGGCT+TGG | 0.554578 | 2.2:-25419569 | MS.gene066196:CDS |
| TGAGCAATTGAGGAGTCCTA+AGG | 0.562902 | 2.2:-25420374 | MS.gene066196:CDS |
| GAGCAATTGAGGAGTCCTAA+GGG | 0.567682 | 2.2:-25420373 | MS.gene066196:CDS |
| TCTACTACTAGCTGGCTTGG+TGG | 0.574076 | 2.2:-25419566 | MS.gene066196:CDS |
| CCTAAAAGTTGGTAAGGCAG+CGG | 0.576352 | 2.2:+25419700 | None:intergenic |
| TCGTACTGTCTACTACTAGC+TGG | 0.586718 | 2.2:-25419574 | MS.gene066196:CDS |
| GATGGAGAGTTGTATGCCGA+TGG | 0.590433 | 2.2:-25422175 | MS.gene066196:CDS |
| CATCTCCTGGAAGAGTGATA+GGG | 0.595404 | 2.2:-25420206 | MS.gene066196:CDS |
| ACATCTTAATGAATCGATAC+CGG | 0.606029 | 2.2:-25420119 | MS.gene066196:intron |
| ATTAGCGAAGCAACTCCGAT+AGG | 0.608650 | 2.2:+25421826 | None:intergenic |
| CAGTGAGATAAGCAATGCCA+AGG | 0.614950 | 2.2:+25419531 | None:intergenic |
| CTCCAAGCTATGAGACCACA+AGG | 0.620952 | 2.2:+25420292 | None:intergenic |
| GCCTATTCTTACACCTCGAG+CGG | 0.621999 | 2.2:-25422008 | MS.gene066196:intron |
| CAGAATGGTTCTATAATAGG+TGG | 0.623008 | 2.2:-25420145 | MS.gene066196:CDS |
| AACAGGTCAATTGTACCTTG+TGG | 0.623062 | 2.2:-25420307 | MS.gene066196:CDS |
| TGGCTTGACAAAATATACAA+TGG | 0.626612 | 2.2:+25419472 | None:intergenic |
| GTTATATGGAAAGATAGAGG+TGG | 0.643018 | 2.2:-25419675 | MS.gene066196:CDS |
| GAGTCAGACTGCTTACCGGA+TGG | 0.645552 | 2.2:-25421673 | MS.gene066196:CDS |
| GGAACAGTTGAATGAGCAGG+AGG | 0.647507 | 2.2:-25419744 | MS.gene066196:intron |
| AATGAGCACATACTATCCAT+CGG | 0.647540 | 2.2:+25422159 | None:intergenic |
| CATGGAATAGGAACCAAGGA+GGG | 0.649024 | 2.2:-25418172 | MS.gene066196:CDS |
| TTGTCATGGAATAGGAACCA+AGG | 0.667669 | 2.2:-25418176 | MS.gene066196:CDS |
| ACCGGATGGCACTAAAGACG+AGG | 0.712451 | 2.2:-25421659 | MS.gene066196:CDS |
| TCATGGAATAGGAACCAAGG+AGG | 0.714609 | 2.2:-25418173 | MS.gene066196:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTATTTTTTAAAAT+AGG | - | chr2.2:25421868-25421887 | MS.gene066196:CDS | 0.0% |
| !! | AAAAAAAAAAAAAAAAACTG+TGG | - | chr2.2:25421254-25421273 | MS.gene066196:intron | 10.0% |
| !! | CAATTATTACAAATATATAA+AGG | + | chr2.2:25419868-25419887 | None:intergenic | 10.0% |
| !!! | GTTTTATTTCTTATTATTTT+GGG | - | chr2.2:25418218-25418237 | MS.gene066196:intron | 10.0% |
| !!! | TGTTTTATTTCTTATTATTT+TGG | - | chr2.2:25418217-25418236 | MS.gene066196:intron | 10.0% |
| !! | AATTAAATGAGCATTAAAAA+AGG | - | chr2.2:25419504-25419523 | MS.gene066196:CDS | 15.0% |
| !! | AATTAATTGAGTAAATAGAT+AGG | - | chr2.2:25419554-25419573 | MS.gene066196:CDS | 15.0% |
| !! | AGAAATAAAACAGTAATTAT+TGG | + | chr2.2:25418209-25418228 | None:intergenic | 15.0% |
| !! | ATAGTTATCTTCTATAATTT+AGG | - | chr2.2:25419923-25419942 | MS.gene066196:intron | 15.0% |
| !! | TTTATTTATGTCAAGTAATT+TGG | - | chr2.2:25419386-25419405 | MS.gene066196:intron | 15.0% |
| !!! | ACAATTTATTTTAAAGTCTT+GGG | - | chr2.2:25419282-25419301 | MS.gene066196:intron | 15.0% |
| !!! | TACAATTTATTTTAAAGTCT+TGG | - | chr2.2:25419281-25419300 | MS.gene066196:intron | 15.0% |
| !! | ATATAATAAATGCCAATTTC+AGG | + | chr2.2:25421086-25421105 | None:intergenic | 20.0% |
| !! | ATGGTGAACAAAATAAATAT+TGG | + | chr2.2:25420554-25420573 | None:intergenic | 20.0% |
| !! | GTTCAACTTTCTTATAAAAT+TGG | - | chr2.2:25419240-25419259 | MS.gene066196:intron | 20.0% |
| !! | TATAATAAATGCCAATTTCA+GGG | + | chr2.2:25421085-25421104 | None:intergenic | 20.0% |
| !! | TGTTCCATAAAATATTCAAA+AGG | + | chr2.2:25420582-25420601 | None:intergenic | 20.0% |
| !!! | ATTTTAAAAAATGAAGAGCA+CGG | - | chr2.2:25421360-25421379 | MS.gene066196:intron | 20.0% |
| !!! | GGATTGAAATTTTAAATGTT+AGG | + | chr2.2:25421047-25421066 | None:intergenic | 20.0% |
| !!! | GTTATTTTAGACAGTATATA+AGG | - | chr2.2:25419334-25419353 | MS.gene066196:intron | 20.0% |
| !!! | TTGAAAGTTTAAGATGAAAA+AGG | + | chr2.2:25420525-25420544 | None:intergenic | 20.0% |
| ! | AAAGAAAAGTTATTGCATAC+CGG | + | chr2.2:25418928-25418947 | None:intergenic | 25.0% |
| ! | AATGTGAACTTCATGAATTA+TGG | + | chr2.2:25418792-25418811 | None:intergenic | 25.0% |
| ! | AGCTGATAGTATACATAAAT+AGG | + | chr2.2:25418881-25418900 | None:intergenic | 25.0% |
| ! | AGGCTATATGAAATTTCATT+AGG | + | chr2.2:25419014-25419033 | None:intergenic | 25.0% |
| ! | AGGTTGTTGAAATTGTTTAT+GGG | - | chr2.2:25418641-25418660 | MS.gene066196:intron | 25.0% |
| ! | ATATGAAAAATCATGCATGA+TGG | + | chr2.2:25419893-25419912 | None:intergenic | 25.0% |
| ! | ATGAAAAATAGGTTAGGATT+AGG | + | chr2.2:25422113-25422132 | None:intergenic | 25.0% |
| ! | ATGTGAACTTCATGAATTAT+GGG | + | chr2.2:25418791-25418810 | None:intergenic | 25.0% |
| ! | ATTTATGTCAAGTAATTTGG+TGG | - | chr2.2:25419389-25419408 | MS.gene066196:intron | 25.0% |
| ! | CAAAGAATGAAAAATAGGTT+AGG | + | chr2.2:25422119-25422138 | None:intergenic | 25.0% |
| ! | GTTGTATTAGTTGTTATGTT+GGG | - | chr2.2:25421899-25421918 | MS.gene066196:intron | 25.0% |
| ! | TATAACACATACAGTTTCAA+TGG | - | chr2.2:25420732-25420751 | MS.gene066196:intron | 25.0% |
| ! | TGTTGTATTAGTTGTTATGT+TGG | - | chr2.2:25421898-25421917 | MS.gene066196:intron | 25.0% |
| ! | TTGTATTAGTTGTTATGTTG+GGG | - | chr2.2:25421900-25421919 | MS.gene066196:intron | 25.0% |
| !! | AAAAGTCGAAAAAGTATAGT+TGG | - | chr2.2:25421476-25421495 | MS.gene066196:CDS | 25.0% |
| !! | ATTATGCTTCTTTTTATCGT+TGG | - | chr2.2:25420839-25420858 | MS.gene066196:intron | 25.0% |
| !! | CTCACCTTTTGAATATTTTA+TGG | - | chr2.2:25420575-25420594 | MS.gene066196:intron | 25.0% |
| !! | GTCAGTGTTTCATATTTTAT+GGG | - | chr2.2:25420440-25420459 | MS.gene066196:intron | 25.0% |
| !! | TATAGAAATGACTTTTCACA+TGG | - | chr2.2:25420481-25420500 | MS.gene066196:intron | 25.0% |
| !! | TGTCAGTGTTTCATATTTTA+TGG | - | chr2.2:25420439-25420458 | MS.gene066196:intron | 25.0% |
| !!! | ACCTATTTTTCATTCTTTGT+AGG | - | chr2.2:25422120-25422139 | MS.gene066196:intron | 25.0% |
| !!! | TTTAAGATGAAAAAGGTGTT+TGG | + | chr2.2:25420518-25420537 | None:intergenic | 25.0% |
| !!! | TTTTAAAAAATGAAGAGCAC+GGG | - | chr2.2:25421361-25421380 | MS.gene066196:intron | 25.0% |
| !!! | TTTTATTTTATGTAGCCGAT+TGG | - | chr2.2:25421142-25421161 | MS.gene066196:intron | 25.0% |
| AAAAATGAATAGTGGTGCAT+TGG | - | chr2.2:25419074-25419093 | MS.gene066196:intron | 30.0% | |
| AAAATATGAAACACTGACAC+TGG | + | chr2.2:25420438-25420457 | None:intergenic | 30.0% | |
| AAAGGAGTTGAAAGAGTTAA+AGG | + | chr2.2:25421961-25421980 | None:intergenic | 30.0% | |
| AAATATTCAAAAGGTGAGCA+TGG | + | chr2.2:25420573-25420592 | None:intergenic | 30.0% | |
| AACAATTTCAACAACCTGAT+AGG | + | chr2.2:25418638-25418657 | None:intergenic | 30.0% | |
| AAGAGTAATATGAACTGACA+TGG | - | chr2.2:25418245-25418264 | MS.gene066196:intron | 30.0% | |
| AATAAGATAGATCCCAAAGA+AGG | + | chr2.2:25419776-25419795 | None:intergenic | 30.0% | |
| AATCAGCAATGAATTCAAAG+AGG | + | chr2.2:25418373-25418392 | None:intergenic | 30.0% | |
| AATTCATGAAGTTCACATTG+CGG | - | chr2.2:25418793-25418812 | MS.gene066196:intron | 30.0% | |
| ACATCTTAATGAATCGATAC+CGG | - | chr2.2:25420221-25420240 | MS.gene066196:CDS | 30.0% | |
| AGCATTAAAAAAGGATGAGA+GGG | - | chr2.2:25419513-25419532 | MS.gene066196:CDS | 30.0% | |
| ATAAGATAGATCCCAAAGAA+GGG | + | chr2.2:25419775-25419794 | None:intergenic | 30.0% | |
| CAGGTTGTTGAAATTGTTTA+TGG | - | chr2.2:25418640-25418659 | MS.gene066196:intron | 30.0% | |
| CCATATAACTTCCTAAAAGT+TGG | + | chr2.2:25420654-25420673 | None:intergenic | 30.0% | |
| CGTCAAATTTGTATTGTTGA+CGG | + | chr2.2:25420100-25420119 | None:intergenic | 30.0% | |
| CGTCAACAATACAAATTTGA+CGG | - | chr2.2:25420098-25420117 | MS.gene066196:intron | 30.0% | |
| CTACAACAAAATAGTAGATG+CGG | - | chr2.2:25419112-25419131 | MS.gene066196:intron | 30.0% | |
| GAAGTTATATGGAAAGATAG+AGG | - | chr2.2:25420662-25420681 | MS.gene066196:intron | 30.0% | |
| GATAGGTACAAGAAAGTAAA+AGG | + | chr2.2:25418621-25418640 | None:intergenic | 30.0% | |
| GCCTACAAAGAATGAAAAAT+AGG | + | chr2.2:25422124-25422143 | None:intergenic | 30.0% | |
| TAAAGGGAGCTTATAAAGAA+AGG | + | chr2.2:25421194-25421213 | None:intergenic | 30.0% | |
| TAATTTCAGAATCAGCCAAT+CGG | + | chr2.2:25421160-25421179 | None:intergenic | 30.0% | |
| TACAGTTACAGATACATGTA+AGG | - | chr2.2:25418586-25418605 | MS.gene066196:intron | 30.0% | |
| TATACTTATCTCTCTTCACA+AGG | - | chr2.2:25420294-25420313 | MS.gene066196:CDS | 30.0% | |
| TGAACTGTGTTCTTATGAAA+AGG | - | chr2.2:25418835-25418854 | MS.gene066196:intron | 30.0% | |
| TGGCTTGACAAAATATACAA+TGG | + | chr2.2:25420871-25420890 | None:intergenic | 30.0% | |
| TTTACTTTCTTGTACCTATC+AGG | - | chr2.2:25418621-25418640 | MS.gene066196:intron | 30.0% | |
| TTTGCTCATCATTCTATTGT+GGG | + | chr2.2:25421581-25421600 | None:intergenic | 30.0% | |
| ! | AATGCACCACTATTCATTTT+TGG | + | chr2.2:25419075-25419094 | None:intergenic | 30.0% |
| ! | ATATATATTTTCCTTCACCG+GGG | - | chr2.2:25421923-25421942 | MS.gene066196:intron | 30.0% |
| ! | GATATATATTTTCCTTCACC+GGG | - | chr2.2:25421922-25421941 | MS.gene066196:intron | 30.0% |
| ! | GGATATATATTTTCCTTCAC+CGG | - | chr2.2:25421921-25421940 | MS.gene066196:intron | 30.0% |
| ! | GGTATGCAATAACTTTTCTT+TGG | - | chr2.2:25418927-25418946 | MS.gene066196:intron | 30.0% |
| ! | TCAAATTGTTATTGATGCAG+TGG | - | chr2.2:25418418-25418437 | MS.gene066196:intron | 30.0% |
| ! | TTCCAGAATGGTTCTATAAT+AGG | - | chr2.2:25420192-25420211 | MS.gene066196:CDS | 30.0% |
| ! | TTGTATATTTTGTCAAGCCA+AGG | - | chr2.2:25420871-25420890 | MS.gene066196:intron | 30.0% |
| ! | TTTCAAGTGTTACATCTATG+AGG | + | chr2.2:25420707-25420726 | None:intergenic | 30.0% |
| ! | TTTTGCTCATCATTCTATTG+TGG | + | chr2.2:25421582-25421601 | None:intergenic | 30.0% |
| !! | ATGCACCACTATTCATTTTT+GGG | + | chr2.2:25419074-25419093 | None:intergenic | 30.0% |
| !! | CAAACTGTTCTGAGATTTAA+AGG | + | chr2.2:25421979-25421998 | None:intergenic | 30.0% |
| !! | CCAACTTTTAGGAAGTTATA+TGG | - | chr2.2:25420651-25420670 | MS.gene066196:intron | 30.0% |
| !! | TAACTTCCTAAAAGTTGGTA+AGG | + | chr2.2:25420649-25420668 | None:intergenic | 30.0% |
| AAATTACCGTATTCTCGTAC+CGG | + | chr2.2:25421344-25421363 | None:intergenic | 35.0% | |
| AACTCCCTCAAAAAAACGTT+AGG | + | chr2.2:25419671-25419690 | None:intergenic | 35.0% | |
| AATAGGTGATTTCATGTGCT+TGG | + | chr2.2:25418864-25418883 | None:intergenic | 35.0% | |
| AATGAGCACATACTATCCAT+CGG | + | chr2.2:25418184-25418203 | None:intergenic | 35.0% | |
| AATTCTGTCCAAAGACAGTT+AGG | + | chr2.2:25419480-25419499 | None:intergenic | 35.0% | |
| AATTTGACGGTGAACAAGAA+AGG | - | chr2.2:25420111-25420130 | MS.gene066196:intron | 35.0% | |
| ACACTGACACTTCAAAATGA+AGG | - | chr2.2:25420344-25420363 | MS.gene066196:CDS | 35.0% | |
| AGCAACCCAAAAATGAATAG+TGG | - | chr2.2:25419066-25419085 | MS.gene066196:intron | 35.0% | |
| AGTGTTGTGTTCATTCCTAT+CGG | - | chr2.2:25418499-25418518 | MS.gene066196:intron | 35.0% | |
| AGTTGAAAGAGTTAAAGGAC+CGG | + | chr2.2:25421956-25421975 | None:intergenic | 35.0% | |
| CAAAAAAACGTTAGGTCTGT+GGG | + | chr2.2:25419663-25419682 | None:intergenic | 35.0% | |
| CACAGGGAACATTGTATATT+AGG | - | chr2.2:25421021-25421040 | MS.gene066196:intron | 35.0% | |
| CACCTATTATAGAACCATTC+TGG | + | chr2.2:25420197-25420216 | None:intergenic | 35.0% | |
| CATGGAAATGCAAAGAGAAA+TGG | + | chr2.2:25419811-25419830 | None:intergenic | 35.0% | |
| CGTTAGCTAAAAACGATTTC+TGG | - | chr2.2:25422022-25422041 | MS.gene066196:CDS | 35.0% | |
| CTGAAGATACTGCAAATAAC+AGG | - | chr2.2:25420016-25420035 | MS.gene066196:intron | 35.0% | |
| GAGCATTAAAAAAGGATGAG+AGG | - | chr2.2:25419512-25419531 | MS.gene066196:CDS | 35.0% | |
| GCAAATACAAGATGAATGCA+TGG | + | chr2.2:25419829-25419848 | None:intergenic | 35.0% | |
| GTTATATGGAAAGATAGAGG+TGG | - | chr2.2:25420665-25420684 | MS.gene066196:intron | 35.0% | |
| TAAGATAGATCCCAAAGAAG+GGG | + | chr2.2:25419774-25419793 | None:intergenic | 35.0% | |
| TCAAAAAAACGTTAGGTCTG+TGG | + | chr2.2:25419664-25419683 | None:intergenic | 35.0% | |
| TCTATTGTGGGTGAAAATTG+TGG | + | chr2.2:25421569-25421588 | None:intergenic | 35.0% | |
| TGCCAATTTCAGGGTTAAAA+CGG | + | chr2.2:25421076-25421095 | None:intergenic | 35.0% | |
| TTCAAAACAACCACTTCAAG+TGG | + | chr2.2:25422075-25422094 | None:intergenic | 35.0% | |
| TTCATCTCTACTGAGTTAGT+AGG | + | chr2.2:25419591-25419610 | None:intergenic | 35.0% | |
| TTCATTCTTTGTAGGCAACT+TGG | - | chr2.2:25422128-25422147 | MS.gene066196:intron | 35.0% | |
| TTGCTGCATAAATTAGCACA+GGG | - | chr2.2:25421005-25421024 | MS.gene066196:intron | 35.0% | |
| TTTCCCAAAAACTTCCAGAA+TGG | - | chr2.2:25420180-25420199 | MS.gene066196:CDS | 35.0% | |
| TTTGCTGCATAAATTAGCAC+AGG | - | chr2.2:25421004-25421023 | MS.gene066196:intron | 35.0% | |
| ! | AAAATATGAAGTACCCGTAC+CGG | + | chr2.2:25421613-25421632 | None:intergenic | 35.0% |
| ! | ATAGAGGTGGATTTGAATCA+AGG | - | chr2.2:25420678-25420697 | MS.gene066196:intron | 35.0% |
| ! | CAGAATGGTTCTATAATAGG+TGG | - | chr2.2:25420195-25420214 | MS.gene066196:CDS | 35.0% |
| ! | CTGTTATTTGCAGTATCTTC+AGG | + | chr2.2:25420018-25420037 | None:intergenic | 35.0% |
| ! | TGAATTTGCGCTGTTTCAAA+AGG | + | chr2.2:25420939-25420958 | None:intergenic | 35.0% |
| ! | TTGAAGTGTCAGTGTTATAG+AGG | + | chr2.2:25420339-25420358 | None:intergenic | 35.0% |
| ! | TTGCACGTTTTATCTGTTTC+AGG | + | chr2.2:25418724-25418743 | None:intergenic | 35.0% |
| !! | AGAACCATTCTGGAAGTTTT+TGG | + | chr2.2:25420187-25420206 | None:intergenic | 35.0% |
| !! | GAACCATTCTGGAAGTTTTT+GGG | + | chr2.2:25420186-25420205 | None:intergenic | 35.0% |
| !!! | ACAGACCTAACGTTTTTTTG+AGG | - | chr2.2:25419663-25419682 | MS.gene066196:CDS | 35.0% |
| !!! | CAGACCTAACGTTTTTTTGA+GGG | - | chr2.2:25419664-25419683 | MS.gene066196:CDS | 35.0% |
| AACAGGTCAATTGTACCTTG+TGG | - | chr2.2:25420033-25420052 | MS.gene066196:intron | 40.0% | |
| ACTCAGTAGAGATGAACACA+TGG | - | chr2.2:25419595-25419614 | MS.gene066196:CDS | 40.0% | |
| AGAATTAGAGGGGAGATGAA+AGG | - | chr2.2:25419693-25419712 | MS.gene066196:CDS | 40.0% | |
| AGGGAGTTGTAGAATTAGAG+GGG | - | chr2.2:25419683-25419702 | MS.gene066196:CDS | 40.0% | |
| AGGTCTATGTTGCATAGGTA+TGG | - | chr2.2:25421292-25421311 | MS.gene066196:intron | 40.0% | |
| ATGTTGCATAGGTATGGGTA+CGG | - | chr2.2:25421298-25421317 | MS.gene066196:intron | 40.0% | |
| ATTGCTTATCTCACTGTTGG+AGG | - | chr2.2:25420816-25420835 | MS.gene066196:intron | 40.0% | |
| CGGCTATTGGATTCATACAA+CGG | + | chr2.2:25421747-25421766 | None:intergenic | 40.0% | |
| CTCATATGCCTAACTGTCTT+TGG | - | chr2.2:25419469-25419488 | MS.gene066196:intron | 40.0% | |
| GACATCATGAAGCTACTTAC+CGG | + | chr2.2:25420243-25420262 | None:intergenic | 40.0% | |
| GAGGGAGTTGTAGAATTAGA+GGG | - | chr2.2:25419682-25419701 | MS.gene066196:CDS | 40.0% | |
| GATGAGCAAAAATGCATACC+CGG | - | chr2.2:25421591-25421610 | MS.gene066196:intron | 40.0% | |
| GCCAATTTCAGGGTTAAAAC+GGG | + | chr2.2:25421075-25421094 | None:intergenic | 40.0% | |
| GGATCTATCTTATTCCTCTC+TGG | - | chr2.2:25419782-25419801 | MS.gene066196:intron | 40.0% | |
| GGTCTATGTTGCATAGGTAT+GGG | - | chr2.2:25421293-25421312 | MS.gene066196:intron | 40.0% | |
| GTTGAAAGAGTTAAAGGACC+GGG | + | chr2.2:25421955-25421974 | None:intergenic | 40.0% | |
| TAAAAAAGGATGAGAGGGAG+TGG | - | chr2.2:25419518-25419537 | MS.gene066196:CDS | 40.0% | |
| TAATTTAAGTGTCTCCCTGC+AGG | - | chr2.2:25418453-25418472 | MS.gene066196:intron | 40.0% | |
| TATGGAACAGTTGAATGAGC+AGG | - | chr2.2:25420593-25420612 | MS.gene066196:intron | 40.0% | |
| TGAGGGAGTTGTAGAATTAG+AGG | - | chr2.2:25419681-25419700 | MS.gene066196:CDS | 40.0% | |
| TTCGCTAATGGCTTCAAGAA+AGG | - | chr2.2:25418528-25418547 | MS.gene066196:intron | 40.0% | |
| ! | AAATATGAAGTACCCGTACC+GGG | + | chr2.2:25421612-25421631 | None:intergenic | 40.0% |
| ! | ACTTTTACCAGAATCATCGC+CGG | - | chr2.2:25418906-25418925 | MS.gene066196:intron | 40.0% |
| ! | AGTGATAGGGAGCACAAATT+TGG | - | chr2.2:25420147-25420166 | MS.gene066196:CDS | 40.0% |
| ! | ATTTGGTGGAGTTGAACAAG+TGG | - | chr2.2:25419403-25419422 | MS.gene066196:intron | 40.0% |
| !! | ACCCGTTTTAACCCTGAAAT+TGG | - | chr2.2:25421071-25421090 | MS.gene066196:intron | 40.0% |
| !!! | ATTTTTGGGTTGCTTGCTCT+GGG | + | chr2.2:25419060-25419079 | None:intergenic | 40.0% |
| AAGAGAAATGGAGTCCAGAG+AGG | + | chr2.2:25419799-25419818 | None:intergenic | 45.0% | |
| AATGTACCAAAGGTCTGTGC+AGG | - | chr2.2:25419436-25419455 | MS.gene066196:intron | 45.0% | |
| AGAATGCCGAAATAACCTGC+AGG | + | chr2.2:25418471-25418490 | None:intergenic | 45.0% | |
| AGCAGGAGGATCTTATTGTC+TGG | - | chr2.2:25420610-25420629 | MS.gene066196:intron | 45.0% | |
| ATGTAAGACTTCCCAGATGG+TGG | - | chr2.2:25419034-25419053 | MS.gene066196:intron | 45.0% | |
| ATTAGCGAAGCAACTCCGAT+AGG | + | chr2.2:25418517-25418536 | None:intergenic | 45.0% | |
| ATTATGGGACAGAGCTAGAC+TGG | + | chr2.2:25418776-25418795 | None:intergenic | 45.0% | |
| CAAAAATGCATACCCGGTAC+GGG | - | chr2.2:25421597-25421616 | MS.gene066196:intron | 45.0% | |
| CAGACTGCAGACTCACTAAA+GGG | + | chr2.2:25421210-25421229 | None:intergenic | 45.0% | |
| CAGTGAGATAAGCAATGCCA+AGG | + | chr2.2:25420812-25420831 | None:intergenic | 45.0% | |
| CATCTCCTGGAAGAGTGATA+GGG | - | chr2.2:25420134-25420153 | MS.gene066196:CDS | 45.0% | |
| CATGGAATAGGAACCAAGGA+GGG | - | chr2.2:25422168-25422187 | MS.gene066196:intron | 45.0% | |
| CCATCTGGGAAGTCTTACAT+AGG | + | chr2.2:25419034-25419053 | None:intergenic | 45.0% | |
| CCTATGTAAGACTTCCCAGA+TGG | - | chr2.2:25419031-25419050 | MS.gene066196:intron | 45.0% | |
| CTGTGAGGTCTATGTTGCAT+AGG | - | chr2.2:25421287-25421306 | MS.gene066196:intron | 45.0% | |
| CTTACTGAGTTCTCTCCCTT+AGG | + | chr2.2:25419985-25420004 | None:intergenic | 45.0% | |
| GAATGCCGAAATAACCTGCA+GGG | + | chr2.2:25418470-25418489 | None:intergenic | 45.0% | |
| GAGAATGCAAGTACGTACCT+TGG | + | chr2.2:25420891-25420910 | None:intergenic | 45.0% | |
| GAGCAATTGAGGAGTCCTAA+GGG | - | chr2.2:25419967-25419986 | MS.gene066196:intron | 45.0% | |
| GCAAAAATGCATACCCGGTA+CGG | - | chr2.2:25421596-25421615 | MS.gene066196:intron | 45.0% | |
| GGCATTGCTTATCTCACTGT+TGG | - | chr2.2:25420813-25420832 | MS.gene066196:intron | 45.0% | |
| GGTGGGAAGAATGATTTCCT+TGG | - | chr2.2:25420792-25420811 | MS.gene066196:intron | 45.0% | |
| GTAAGAATAGGCTTGCAAGC+TGG | + | chr2.2:25418324-25418343 | None:intergenic | 45.0% | |
| GTATGAGTCAGACTGCTTAC+CGG | - | chr2.2:25418663-25418682 | MS.gene066196:intron | 45.0% | |
| GTCGAAGTGATGAGCAATTG+AGG | - | chr2.2:25419956-25419975 | MS.gene066196:intron | 45.0% | |
| TACCTTGTGGTCTCATAGCT+TGG | - | chr2.2:25420046-25420065 | MS.gene066196:intron | 45.0% | |
| TACGGTACCCAGTACGATAT+GGG | - | chr2.2:25421316-25421335 | MS.gene066196:intron | 45.0% | |
| TAGAGGGGAGATGAAAGGAT+AGG | - | chr2.2:25419698-25419717 | MS.gene066196:CDS | 45.0% | |
| TAGATCCCAAAGAAGGGGAA+AGG | + | chr2.2:25419769-25419788 | None:intergenic | 45.0% | |
| TATCGGAGTTGCTTCGCTAA+TGG | - | chr2.2:25418516-25418535 | MS.gene066196:intron | 45.0% | |
| TCAGGGTTAAAACGGGTGAA+TGG | + | chr2.2:25421068-25421087 | None:intergenic | 45.0% | |
| TCATGGAATAGGAACCAAGG+AGG | - | chr2.2:25422167-25422186 | MS.gene066196:intron | 45.0% | |
| TCGTACTGTCTACTACTAGC+TGG | - | chr2.2:25420766-25420785 | MS.gene066196:intron | 45.0% | |
| TCTTCAACAGCCACTTGAAG+TGG | - | chr2.2:25422062-25422081 | MS.gene066196:intron | 45.0% | |
| TGAGCAATTGAGGAGTCCTA+AGG | - | chr2.2:25419966-25419985 | MS.gene066196:intron | 45.0% | |
| TGTCTCCCTGCAGGTTATTT+CGG | - | chr2.2:25418462-25418481 | MS.gene066196:intron | 45.0% | |
| !! | AACCTCACACTCTGAAGCAT+GGG | + | chr2.2:25421644-25421663 | None:intergenic | 45.0% |
| !! | CCTAAAAGTTGGTAAGGCAG+CGG | + | chr2.2:25420643-25420662 | None:intergenic | 45.0% |
| !! | TCTAGTAGTTTTACCGCTCG+AGG | + | chr2.2:25418348-25418367 | None:intergenic | 45.0% |
| !! | TGAACAAGAAAGGCATCTCC+TGG | - | chr2.2:25420121-25420140 | MS.gene066196:CDS | 45.0% |
| !!! | CATTTTTGGGTTGCTTGCTC+TGG | + | chr2.2:25419061-25419080 | None:intergenic | 45.0% |
| !! | AATTATTACAAATATATAAA+GGG | + | chr2.2:25419867-25419886 | None:intergenic | 5.0% |
| !! | ATAAAATTTAAATTATACAA+TGG | + | chr2.2:25421840-25421859 | None:intergenic | 5.0% |
| AACGTTAGGTCTGTGGGACT+TGG | + | chr2.2:25419657-25419676 | None:intergenic | 50.0% | |
| ACCCAGTACGATATGGGTAC+CGG | - | chr2.2:25421322-25421341 | MS.gene066196:intron | 50.0% | |
| ACCGCTCGAGGTGTAAGAAT+AGG | + | chr2.2:25418336-25418355 | None:intergenic | 50.0% | |
| ACCGGTACCCATATCGTACT+GGG | + | chr2.2:25421326-25421345 | None:intergenic | 50.0% | |
| ACCTCGTCTTTAGTGCCATC+CGG | + | chr2.2:25418685-25418704 | None:intergenic | 50.0% | |
| AGGGGAGATGAAAGGATAGG+AGG | - | chr2.2:25419701-25419720 | MS.gene066196:CDS | 50.0% | |
| AGTTGAACAAGTGGCCTGGA+GGG | - | chr2.2:25419412-25419431 | MS.gene066196:intron | 50.0% | |
| ATCCCAAAGAAGGGGAAAGG+AGG | + | chr2.2:25419766-25419785 | None:intergenic | 50.0% | |
| ATTGGCAGTCAAGGCAAGAG+AGG | - | chr2.2:25421779-25421798 | MS.gene066196:intron | 50.0% | |
| CACCTTACATACCATGCTCC+AGG | + | chr2.2:25419621-25419640 | None:intergenic | 50.0% | |
| CCTGGAGGGAAATGTACCAA+AGG | - | chr2.2:25419426-25419445 | MS.gene066196:intron | 50.0% | |
| CCTTTGGTACATTTCCCTCC+AGG | + | chr2.2:25419429-25419448 | None:intergenic | 50.0% | |
| CTCCAAGCTATGAGACCACA+AGG | + | chr2.2:25420051-25420070 | None:intergenic | 50.0% | |
| CTGTCTACTACTAGCTGGCT+TGG | - | chr2.2:25420771-25420790 | MS.gene066196:intron | 50.0% | |
| GCAGACTGCAGACTCACTAA+AGG | + | chr2.2:25421211-25421230 | None:intergenic | 50.0% | |
| GCATCTCCTGGAAGAGTGAT+AGG | - | chr2.2:25420133-25420152 | MS.gene066196:CDS | 50.0% | |
| GCCTATTCTTACACCTCGAG+CGG | - | chr2.2:25418332-25418351 | MS.gene066196:intron | 50.0% | |
| GGAACAGTTGAATGAGCAGG+AGG | - | chr2.2:25420596-25420615 | MS.gene066196:intron | 50.0% | |
| GTACGGTACCCAGTACGATA+TGG | - | chr2.2:25421315-25421334 | MS.gene066196:intron | 50.0% | |
| GTAGAGATGAACACATGGCC+TGG | - | chr2.2:25419600-25419619 | MS.gene066196:CDS | 50.0% | |
| TACCCATGCTTCAGAGTGTG+AGG | - | chr2.2:25421639-25421658 | MS.gene066196:CDS | 50.0% | |
| TACCGGTACCCATATCGTAC+TGG | + | chr2.2:25421327-25421346 | None:intergenic | 50.0% | |
| TCCCAAAGAAGGGGAAAGGA+GGG | + | chr2.2:25419765-25419784 | None:intergenic | 50.0% | |
| TCCCTCCTTTCCCCTTCTTT+GGG | - | chr2.2:25419761-25419780 | MS.gene066196:intron | 50.0% | |
| TGAATCCAATAGCCGACCTC+TGG | - | chr2.2:25421752-25421771 | MS.gene066196:intron | 50.0% | |
| TGTGGCTTGAAGTTGCTGTG+AGG | - | chr2.2:25421272-25421291 | MS.gene066196:intron | 50.0% | |
| TTGCATACCGGCGATGATTC+TGG | + | chr2.2:25418916-25418935 | None:intergenic | 50.0% | |
| ! | ACAGAGCTAGACTGGTGTCA+AGG | + | chr2.2:25418768-25418787 | None:intergenic | 50.0% |
| ! | CCGCTGCCTTACCAACTTTT+AGG | - | chr2.2:25420640-25420659 | MS.gene066196:intron | 50.0% |
| !! | CTACTACTAGCTGGCTTGGT+GGG | - | chr2.2:25420775-25420794 | MS.gene066196:intron | 50.0% |
| !! | GAACCTCACACTCTGAAGCA+TGG | + | chr2.2:25421645-25421664 | None:intergenic | 50.0% |
| !! | GGCTGAGAGCATTGATCTCT+CGG | + | chr2.2:25421726-25421745 | None:intergenic | 50.0% |
| !! | TCTACTACTAGCTGGCTTGG+TGG | - | chr2.2:25420774-25420793 | MS.gene066196:intron | 50.0% |
| !! | TGGGTACCGGTACGAGAATA+CGG | - | chr2.2:25421335-25421354 | MS.gene066196:intron | 50.0% |
| AAAGGACCGGGTTCAAACCC+CGG | + | chr2.2:25421943-25421962 | None:intergenic | 55.0% | |
| AAGGTCTGTGCAGGAGCAGT+AGG | - | chr2.2:25419445-25419464 | MS.gene066196:intron | 55.0% | |
| ACCGGATGGCACTAAAGACG+AGG | - | chr2.2:25418681-25418700 | MS.gene066196:intron | 55.0% | |
| ACTGCTCCTGCACAGACCTT+TGG | + | chr2.2:25419445-25419464 | None:intergenic | 55.0% | |
| CTCCCTCCTTTCCCCTTCTT+TGG | - | chr2.2:25419760-25419779 | MS.gene066196:intron | 55.0% | |
| CTGCATCTGTCTGCTGATGC+AGG | + | chr2.2:25421703-25421722 | None:intergenic | 55.0% | |
| GAGTCAGACTGCTTACCGGA+TGG | - | chr2.2:25418667-25418686 | MS.gene066196:intron | 55.0% | |
| GAGTTGAACAAGTGGCCTGG+AGG | - | chr2.2:25419411-25419430 | MS.gene066196:intron | 55.0% | |
| GGCCTGGAGCATGGTATGTA+AGG | - | chr2.2:25419616-25419635 | MS.gene066196:CDS | 55.0% | |
| GTGCTCCCTATCACTCTTCC+AGG | + | chr2.2:25420142-25420161 | None:intergenic | 55.0% | |
| GTGGAGTTGAACAAGTGGCC+TGG | - | chr2.2:25419408-25419427 | MS.gene066196:intron | 55.0% | |
| TGAACACATGGCCTGGAGCA+TGG | - | chr2.2:25419607-25419626 | MS.gene066196:CDS | 55.0% | |
| TTGACTGCCAATGCAGCCAG+AGG | + | chr2.2:25421771-25421790 | None:intergenic | 55.0% | |
| ! | TCTGGCTGCATTGGCAGTCA+AGG | - | chr2.2:25421770-25421789 | MS.gene066196:intron | 55.0% |
| CCTTCACCGGGGTTTGAACC+CGG | - | chr2.2:25421934-25421953 | MS.gene066196:intron | 60.0% | |
| CTGCCAATGCAGCCAGAGGT+CGG | + | chr2.2:25421767-25421786 | None:intergenic | 60.0% | |
| TAGCCGACCTCTGGCTGCAT+TGG | - | chr2.2:25421761-25421780 | MS.gene066196:intron | 60.0% | |
| TGCAGCCAGAGGTCGGCTAT+TGG | + | chr2.2:25421760-25421779 | None:intergenic | 60.0% | |
| ! | CTTGCTCTGGGCCACCATCT+GGG | + | chr2.2:25419048-25419067 | None:intergenic | 60.0% |
| CCGGGTTCAAACCCCGGTGA+AGG | + | chr2.2:25421937-25421956 | None:intergenic | 65.0% | |
| ! | GCTTGCTCTGGGCCACCATC+TGG | + | chr2.2:25419049-25419068 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 25418166 | 25422196 | 25418166 | ID=MS.gene066196 |
| chr2.2 | mRNA | 25418166 | 25422196 | 25418166 | ID=MS.gene066196.t1;Parent=MS.gene066196 |
| chr2.2 | exon | 25422172 | 25422196 | 25422172 | ID=MS.gene066196.t1.exon1;Parent=MS.gene066196.t1 |
| chr2.2 | CDS | 25422172 | 25422196 | 25422172 | ID=cds.MS.gene066196.t1;Parent=MS.gene066196.t1 |
| chr2.2 | exon | 25422009 | 25422067 | 25422009 | ID=MS.gene066196.t1.exon2;Parent=MS.gene066196.t1 |
| chr2.2 | CDS | 25422009 | 25422067 | 25422009 | ID=cds.MS.gene066196.t1;Parent=MS.gene066196.t1 |
| chr2.2 | exon | 25421813 | 25421887 | 25421813 | ID=MS.gene066196.t1.exon3;Parent=MS.gene066196.t1 |
| chr2.2 | CDS | 25421813 | 25421887 | 25421813 | ID=cds.MS.gene066196.t1;Parent=MS.gene066196.t1 |
| chr2.2 | exon | 25421606 | 25421719 | 25421606 | ID=MS.gene066196.t1.exon4;Parent=MS.gene066196.t1 |
| chr2.2 | CDS | 25421606 | 25421719 | 25421606 | ID=cds.MS.gene066196.t1;Parent=MS.gene066196.t1 |
| chr2.2 | exon | 25421435 | 25421505 | 25421435 | ID=MS.gene066196.t1.exon5;Parent=MS.gene066196.t1 |
| chr2.2 | CDS | 25421435 | 25421505 | 25421435 | ID=cds.MS.gene066196.t1;Parent=MS.gene066196.t1 |
| chr2.2 | exon | 25420120 | 25420417 | 25420120 | ID=MS.gene066196.t1.exon6;Parent=MS.gene066196.t1 |
| chr2.2 | CDS | 25420120 | 25420417 | 25420120 | ID=cds.MS.gene066196.t1;Parent=MS.gene066196.t1 |
| chr2.2 | exon | 25419470 | 25419759 | 25419470 | ID=MS.gene066196.t1.exon7;Parent=MS.gene066196.t1 |
| chr2.2 | CDS | 25419470 | 25419759 | 25419470 | ID=cds.MS.gene066196.t1;Parent=MS.gene066196.t1 |
| chr2.2 | exon | 25418166 | 25418220 | 25418166 | ID=MS.gene066196.t1.exon8;Parent=MS.gene066196.t1 |
| chr2.2 | CDS | 25418166 | 25418220 | 25418166 | ID=cds.MS.gene066196.t1;Parent=MS.gene066196.t1 |
| Gene Sequence |
| Protein sequence |
