Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070789.t1 | RHN45364.1 | 98.7 | 460 | 6 | 0 | 1 | 460 | 44 | 503 | 7.00E-259 | 902.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070789.t1 | Q8GW20 | 64.7 | 481 | 144 | 6 | 1 | 460 | 1 | 476 | 3.5e-166 | 586.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070789.t1 | G7L3A6 | 98.7 | 460 | 6 | 0 | 1 | 460 | 1 | 460 | 5.0e-259 | 902.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene070789 | 0.850324 | 1.83E-60 | -1.69E-46 |
| MS.gene049369 | MS.gene070789 | 0.819199 | 1.32E-52 | -1.69E-46 |
| MS.gene049427 | MS.gene070789 | 0.818191 | 2.23E-52 | -1.69E-46 |
| MS.gene049488 | MS.gene070789 | 0.839817 | 1.26E-57 | -1.69E-46 |
| MS.gene049681 | MS.gene070789 | 0.803884 | 2.82E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene070789 | 0.828442 | 8.97E-55 | -1.69E-46 |
| MS.gene050426 | MS.gene070789 | -0.801526 | 8.64E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene070789 | 0.854099 | 1.54E-61 | -1.69E-46 |
| MS.gene050812 | MS.gene070789 | 0.82786 | 1.24E-54 | -1.69E-46 |
| MS.gene050971 | MS.gene070789 | 0.821558 | 3.79E-53 | -1.69E-46 |
| MS.gene05105 | MS.gene070789 | 0.803583 | 3.25E-49 | -1.69E-46 |
| MS.gene051360 | MS.gene070789 | 0.805928 | 1.05E-49 | -1.69E-46 |
| MS.gene051387 | MS.gene070789 | 0.826444 | 2.70E-54 | -1.69E-46 |
| MS.gene051525 | MS.gene070789 | 0.838458 | 2.84E-57 | -1.69E-46 |
| MS.gene051582 | MS.gene070789 | 0.825597 | 4.30E-54 | -1.69E-46 |
| MS.gene051605 | MS.gene070789 | 0.807604 | 4.66E-50 | -1.69E-46 |
| MS.gene052011 | MS.gene070789 | -0.846409 | 2.21E-59 | -1.69E-46 |
| MS.gene052077 | MS.gene070789 | 0.816597 | 5.09E-52 | -1.69E-46 |
| MS.gene052135 | MS.gene070789 | 0.802336 | 5.89E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene070789 | 0.883449 | 4.45E-71 | -1.69E-46 |
| MS.gene052253 | MS.gene070789 | 0.878485 | 2.70E-69 | -1.69E-46 |
| MS.gene052310 | MS.gene070789 | 0.84639 | 2.24E-59 | -1.69E-46 |
| MS.gene052322 | MS.gene070789 | 0.813056 | 3.11E-51 | -1.69E-46 |
| MS.gene052340 | MS.gene070789 | 0.855052 | 8.17E-62 | -1.69E-46 |
| MS.gene052414 | MS.gene070789 | 0.843295 | 1.53E-58 | -1.69E-46 |
| MS.gene052421 | MS.gene070789 | 0.855936 | 4.52E-62 | -1.69E-46 |
| MS.gene052485 | MS.gene070789 | 0.851027 | 1.16E-60 | -1.69E-46 |
| MS.gene052505 | MS.gene070789 | 0.808245 | 3.41E-50 | -1.69E-46 |
| MS.gene05316 | MS.gene070789 | 0.824021 | 1.01E-53 | -1.69E-46 |
| MS.gene053758 | MS.gene070789 | 0.861576 | 9.31E-64 | -1.69E-46 |
| MS.gene053836 | MS.gene070789 | 0.813745 | 2.19E-51 | -1.69E-46 |
| MS.gene053873 | MS.gene070789 | 0.807421 | 5.10E-50 | -1.69E-46 |
| MS.gene053912 | MS.gene070789 | 0.835044 | 2.11E-56 | -1.69E-46 |
| MS.gene053928 | MS.gene070789 | 0.811956 | 5.40E-51 | -1.69E-46 |
| MS.gene054102 | MS.gene070789 | 0.813018 | 3.17E-51 | -1.69E-46 |
| MS.gene054107 | MS.gene070789 | 0.805356 | 1.39E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene070789 | 0.87086 | 1.06E-66 | -1.69E-46 |
| MS.gene054183 | MS.gene070789 | 0.841578 | 4.37E-58 | -1.69E-46 |
| MS.gene054349 | MS.gene070789 | 0.852085 | 5.82E-61 | -1.69E-46 |
| MS.gene054556 | MS.gene070789 | 0.810685 | 1.02E-50 | -1.69E-46 |
| MS.gene054719 | MS.gene070789 | 0.812294 | 4.56E-51 | -1.69E-46 |
| MS.gene05505 | MS.gene070789 | 0.808332 | 3.26E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene070789 | 0.830642 | 2.62E-55 | -1.69E-46 |
| MS.gene055369 | MS.gene070789 | 0.828281 | 9.81E-55 | -1.69E-46 |
| MS.gene055412 | MS.gene070789 | 0.839763 | 1.30E-57 | -1.69E-46 |
| MS.gene055539 | MS.gene070789 | 0.83589 | 1.29E-56 | -1.69E-46 |
| MS.gene05553 | MS.gene070789 | 0.858011 | 1.10E-62 | -1.69E-46 |
| MS.gene055741 | MS.gene070789 | 0.81453 | 1.47E-51 | -1.69E-46 |
| MS.gene055744 | MS.gene070789 | 0.822682 | 2.08E-53 | -1.69E-46 |
| MS.gene055909 | MS.gene070789 | 0.82361 | 1.26E-53 | -1.69E-46 |
| MS.gene055911 | MS.gene070789 | 0.831287 | 1.82E-55 | -1.69E-46 |
| MS.gene056337 | MS.gene070789 | 0.813436 | 2.56E-51 | -1.69E-46 |
| MS.gene056407 | MS.gene070789 | 0.823438 | 1.39E-53 | -1.69E-46 |
| MS.gene056511 | MS.gene070789 | 0.840569 | 8.04E-58 | -1.69E-46 |
| MS.gene056514 | MS.gene070789 | 0.843284 | 1.54E-58 | -1.69E-46 |
| MS.gene056609 | MS.gene070789 | 0.815362 | 9.61E-52 | -1.69E-46 |
| MS.gene056659 | MS.gene070789 | 0.857453 | 1.62E-62 | -1.69E-46 |
| MS.gene056723 | MS.gene070789 | 0.834681 | 2.60E-56 | -1.69E-46 |
| MS.gene05702 | MS.gene070789 | 0.829905 | 3.96E-55 | -1.69E-46 |
| MS.gene057124 | MS.gene070789 | 0.838033 | 3.66E-57 | -1.69E-46 |
| MS.gene057396 | MS.gene070789 | 0.852508 | 4.41E-61 | -1.69E-46 |
| MS.gene057476 | MS.gene070789 | 0.805342 | 1.40E-49 | -1.69E-46 |
| MS.gene057749 | MS.gene070789 | 0.8858 | 5.95E-72 | -1.69E-46 |
| MS.gene057823 | MS.gene070789 | 0.883455 | 4.42E-71 | -1.69E-46 |
| MS.gene057825 | MS.gene070789 | 0.848957 | 4.40E-60 | -1.69E-46 |
| MS.gene057826 | MS.gene070789 | 0.812675 | 3.76E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene070789 | 0.823477 | 1.36E-53 | -1.69E-46 |
| MS.gene058007 | MS.gene070789 | 0.860005 | 2.79E-63 | -1.69E-46 |
| MS.gene058090 | MS.gene070789 | 0.80436 | 2.24E-49 | -1.69E-46 |
| MS.gene058120 | MS.gene070789 | 0.804938 | 1.70E-49 | -1.69E-46 |
| MS.gene058142 | MS.gene070789 | 0.830971 | 2.17E-55 | -1.69E-46 |
| MS.gene058365 | MS.gene070789 | 0.815928 | 7.19E-52 | -1.69E-46 |
| MS.gene058376 | MS.gene070789 | 0.820986 | 5.13E-53 | -1.69E-46 |
| MS.gene058444 | MS.gene070789 | 0.837142 | 6.19E-57 | -1.69E-46 |
| MS.gene058660 | MS.gene070789 | 0.824956 | 6.09E-54 | -1.69E-46 |
| MS.gene058700 | MS.gene070789 | 0.822841 | 1.91E-53 | -1.69E-46 |
| MS.gene05886 | MS.gene070789 | 0.844535 | 7.12E-59 | -1.69E-46 |
| MS.gene058928 | MS.gene070789 | 0.867606 | 1.21E-65 | -1.69E-46 |
| MS.gene058948 | MS.gene070789 | 0.812807 | 3.52E-51 | -1.69E-46 |
| MS.gene058949 | MS.gene070789 | 0.846852 | 1.67E-59 | -1.69E-46 |
| MS.gene058995 | MS.gene070789 | 0.814644 | 1.39E-51 | -1.69E-46 |
| MS.gene059011 | MS.gene070789 | 0.825822 | 3.80E-54 | -1.69E-46 |
| MS.gene05907 | MS.gene070789 | 0.854148 | 1.49E-61 | -1.69E-46 |
| MS.gene059082 | MS.gene070789 | 0.813069 | 3.09E-51 | -1.69E-46 |
| MS.gene059141 | MS.gene070789 | 0.825447 | 4.66E-54 | -1.69E-46 |
| MS.gene059285 | MS.gene070789 | 0.821815 | 3.30E-53 | -1.69E-46 |
| MS.gene059420 | MS.gene070789 | 0.871942 | 4.65E-67 | -1.69E-46 |
| MS.gene059455 | MS.gene070789 | 0.808226 | 3.44E-50 | -1.69E-46 |
| MS.gene059462 | MS.gene070789 | 0.816739 | 4.73E-52 | -1.69E-46 |
| MS.gene059597 | MS.gene070789 | 0.854838 | 9.43E-62 | -1.69E-46 |
| MS.gene05959 | MS.gene070789 | 0.818486 | 1.91E-52 | -1.69E-46 |
| MS.gene059674 | MS.gene070789 | 0.81591 | 7.26E-52 | -1.69E-46 |
| MS.gene059676 | MS.gene070789 | 0.827412 | 1.59E-54 | -1.69E-46 |
| MS.gene059688 | MS.gene070789 | 0.849821 | 2.53E-60 | -1.69E-46 |
| MS.gene059692 | MS.gene070789 | 0.833689 | 4.62E-56 | -1.69E-46 |
| MS.gene059695 | MS.gene070789 | 0.834801 | 2.43E-56 | -1.69E-46 |
| MS.gene059807 | MS.gene070789 | 0.827618 | 1.42E-54 | -1.69E-46 |
| MS.gene05984 | MS.gene070789 | 0.812883 | 3.39E-51 | -1.69E-46 |
| MS.gene059876 | MS.gene070789 | 0.812506 | 4.10E-51 | -1.69E-46 |
| MS.gene059894 | MS.gene070789 | 0.801211 | 1.00E-48 | -1.69E-46 |
| MS.gene060247 | MS.gene070789 | 0.838278 | 3.16E-57 | -1.69E-46 |
| MS.gene060403 | MS.gene070789 | 0.814544 | 1.46E-51 | -1.69E-46 |
| MS.gene060407 | MS.gene070789 | 0.83578 | 1.37E-56 | -1.69E-46 |
| MS.gene060837 | MS.gene070789 | 0.809264 | 2.06E-50 | -1.69E-46 |
| MS.gene060986 | MS.gene070789 | 0.813894 | 2.03E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene070789 | 0.838516 | 2.75E-57 | -1.69E-46 |
| MS.gene061051 | MS.gene070789 | -0.81077 | 9.77E-51 | -1.69E-46 |
| MS.gene061154 | MS.gene070789 | 0.80951 | 1.83E-50 | -1.69E-46 |
| MS.gene061159 | MS.gene070789 | 0.835253 | 1.87E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070789.t1 | MTR_7g038740 | 98.696 | 460 | 6 | 0 | 1 | 460 | 1 | 460 | 0.0 | 926 |
| MS.gene070789.t1 | MTR_7g030010 | 98.696 | 460 | 6 | 0 | 1 | 460 | 1 | 460 | 0.0 | 926 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070789.t1 | AT5G03900 | 67.568 | 481 | 130 | 6 | 1 | 460 | 1 | 476 | 0.0 | 640 |
| MS.gene070789.t1 | AT5G03900 | 67.742 | 434 | 114 | 6 | 1 | 413 | 1 | 429 | 0.0 | 575 |
Find 130 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTCTTCGATTCCTTGAT+TGG | 0.205719 | 7.3:+60767670 | None:intergenic |
| CATCTCAAGCTCCACTGATC+TGG | 0.252314 | 7.3:+60762119 | None:intergenic |
| CTGGGAGGCCTTAATCTCTT+TGG | 0.252677 | 7.3:-60763331 | MS.gene070789:CDS |
| TTAATCCAGTAGATTTATTC+TGG | 0.259390 | 7.3:-60768024 | MS.gene070789:intron |
| AGGAGAAAAGATGGCAATTC+AGG | 0.285596 | 7.3:-60763474 | MS.gene070789:intron |
| CTCCGCCTTCTATTGTAATA+TGG | 0.292015 | 7.3:+60767853 | None:intergenic |
| CGACATATTTCCTCTTCTTC+AGG | 0.299928 | 7.3:-60763153 | MS.gene070789:intron |
| AGCTTGGTGCCAAGTCATTT+AGG | 0.311112 | 7.3:-60768415 | MS.gene070789:CDS |
| GCAAGCGTTATGGTGCCTTT+TGG | 0.313036 | 7.3:-60762144 | MS.gene070789:CDS |
| TAGGTCTTCTCCTTTGTGTT+TGG | 0.318761 | 7.3:-60767704 | MS.gene070789:CDS |
| CAATAACTCCAAAGAGATTA+AGG | 0.322609 | 7.3:+60763323 | None:intergenic |
| TTCCTTCTTTGCAATTCCTT+TGG | 0.322980 | 7.3:-60763006 | MS.gene070789:CDS |
| TACTTGATAAGGGTTTCTTT+TGG | 0.327440 | 7.3:-60768270 | MS.gene070789:CDS |
| AGAACCGGAGAGTTAATAAA+AGG | 0.333486 | 7.3:-60770308 | MS.gene070789:CDS |
| CTCTTTGGAGTTATTGTTCT+CGG | 0.336071 | 7.3:-60763316 | MS.gene070789:CDS |
| GAGAGCATTGGTCGTTGGTC+TGG | 0.336275 | 7.3:-60763350 | MS.gene070789:CDS |
| CTGTTGATGGGTGTGGTGGT+AGG | 0.341968 | 7.3:-60770170 | MS.gene070789:CDS |
| CCTGTGCTATTACGATTTGA+TGG | 0.342819 | 7.3:-60764005 | MS.gene070789:CDS |
| ACAAATTTAATGAAGCTATC+AGG | 0.369264 | 7.3:+60763179 | None:intergenic |
| GGAGGCAGATCATATGATTC+AGG | 0.383697 | 7.3:-60768061 | MS.gene070789:CDS |
| TGATACTGATGGTTTCTTAG+AGG | 0.386753 | 7.3:-60770070 | MS.gene070789:intron |
| TCTTCTTCGATTCCTTGATT+GGG | 0.388693 | 7.3:+60767671 | None:intergenic |
| TGGATGTCGGCCGAGGGATC+AGG | 0.394204 | 7.3:-60770254 | MS.gene070789:CDS |
| GGGATCCATATTACAATAGA+AGG | 0.401630 | 7.3:-60767858 | MS.gene070789:CDS |
| ATCTCAAGCTCCACTGATCT+GGG | 0.405426 | 7.3:+60762120 | None:intergenic |
| TTGCAATTCCTTTGGTTCGA+TGG | 0.409917 | 7.3:-60762998 | MS.gene070789:CDS |
| GCGGCCGTGGATGTCGGCCG+AGG | 0.423101 | 7.3:-60770261 | MS.gene070789:CDS |
| GGTGGTACCGCGGGCGGCCG+TGG | 0.423156 | 7.3:-60770274 | MS.gene070789:CDS |
| TTCTCCTTTGTGTTTGGAGA+CGG | 0.426582 | 7.3:-60767698 | MS.gene070789:CDS |
| CGAAGAAGAGAGATGGAAGT+TGG | 0.427894 | 7.3:-60767657 | MS.gene070789:intron |
| CACCACCCGGCCTGATCCCT+CGG | 0.428659 | 7.3:+60770244 | None:intergenic |
| TGATGTTAGGAAAAGGACTA+TGG | 0.432883 | 7.3:-60770196 | MS.gene070789:CDS |
| GTAGAATCTATATCAAGATA+TGG | 0.435448 | 7.3:+60767415 | None:intergenic |
| TGTTGTTGCAGCTGAAGAAC+TGG | 0.435917 | 7.3:-60767440 | MS.gene070789:CDS |
| CACAAGAGGAAGCAAAATCC+AGG | 0.441740 | 7.3:+60762203 | None:intergenic |
| CCGGTTCTGCGGGAAAATGA+AGG | 0.443213 | 7.3:+60770323 | None:intergenic |
| GGGCAATACATCGCATCTAA+TGG | 0.452042 | 7.3:-60767466 | MS.gene070789:CDS |
| AGATGGGCAGATTGGGTTGG+AGG | 0.453297 | 7.3:-60763514 | MS.gene070789:CDS |
| TGTTGATGGGTGTGGTGGTA+GGG | 0.454395 | 7.3:-60770169 | MS.gene070789:CDS |
| ATAAGTTGTCGAGTGATGTT+AGG | 0.455146 | 7.3:-60770209 | MS.gene070789:CDS |
| AGTAAGAGAAAAGAATATGT+TGG | 0.456559 | 7.3:-60763541 | MS.gene070789:CDS |
| GGTGGGCTTTGGTGGTACCG+CGG | 0.458373 | 7.3:-60770284 | MS.gene070789:CDS |
| GTGGGCTTTGGTGGTACCGC+GGG | 0.459286 | 7.3:-60770283 | MS.gene070789:CDS |
| CCGCGGGCGGCCGTGGATGT+CGG | 0.465097 | 7.3:-60770267 | MS.gene070789:CDS |
| AGGGATCAGGCCGGGTGGTG+TGG | 0.467034 | 7.3:-60770241 | MS.gene070789:CDS |
| GTGCTGCAGGTTTCTGAGGA+AGG | 0.468920 | 7.3:-60768476 | MS.gene070789:intron |
| AAAGTAAGAAGACGAGATGT+GGG | 0.469474 | 7.3:+60770369 | None:intergenic |
| CCTCACCAGAATAAATCTAC+TGG | 0.473115 | 7.3:+60768019 | None:intergenic |
| TATGAAGTACCTTCTGCTGC+TGG | 0.473888 | 7.3:+60768191 | None:intergenic |
| TATTAACTCTCCGGTTCTGC+GGG | 0.474446 | 7.3:+60770313 | None:intergenic |
| GTGCCGGAGAATACTTGATA+AGG | 0.475205 | 7.3:-60768281 | MS.gene070789:CDS |
| AGAGCATTGGTCGTTGGTCT+GGG | 0.476888 | 7.3:-60763349 | MS.gene070789:CDS |
| TCCACTGATCTGGGTCCAAA+AGG | 0.478085 | 7.3:+60762129 | None:intergenic |
| TGTGGTGGTAGGGTGACTGT+TGG | 0.479974 | 7.3:-60770159 | MS.gene070789:CDS |
| GGTGATGTTGCTAGTAGAGC+TGG | 0.482042 | 7.3:-60770138 | MS.gene070789:CDS |
| GATCAGGCCGGGTGGTGTGG+TGG | 0.483470 | 7.3:-60770238 | MS.gene070789:CDS |
| AAAAGATGGGCAGATTGGGT+TGG | 0.492155 | 7.3:-60763517 | MS.gene070789:CDS |
| AGGACTATGGATGCTGTTGA+TGG | 0.493679 | 7.3:-60770183 | MS.gene070789:CDS |
| TGCCGGAGAATACTTGATAA+GGG | 0.496075 | 7.3:-60768280 | MS.gene070789:CDS |
| AGCTTTAATCCTAAATGACT+TGG | 0.505596 | 7.3:+60768406 | None:intergenic |
| GTCGGCCGAGGGATCAGGCC+GGG | 0.508581 | 7.3:-60770249 | MS.gene070789:CDS |
| TATACCTCTTCATCAACAAC+AGG | 0.508816 | 7.3:+60763978 | None:intergenic |
| TTCTGCGTCAATGAAATGTC+GGG | 0.513310 | 7.3:+60762897 | None:intergenic |
| CGGCCGTGGATGTCGGCCGA+GGG | 0.513713 | 7.3:-60770260 | MS.gene070789:CDS |
| AACCAAAGGAATTGCAAAGA+AGG | 0.514366 | 7.3:+60763004 | None:intergenic |
| TGTCGAGTGATGTTAGGAAA+AGG | 0.514566 | 7.3:-60770203 | MS.gene070789:CDS |
| TAATATATGCAGATTTATGC+TGG | 0.514690 | 7.3:-60763029 | MS.gene070789:intron |
| CATTGACTTTGCTAGGGTGC+CGG | 0.519917 | 7.3:-60768297 | MS.gene070789:intron |
| ATGGATGCTGTTGATGGGTG+TGG | 0.522737 | 7.3:-60770177 | MS.gene070789:CDS |
| GCTCTTGCTGCTGATACTGA+TGG | 0.525608 | 7.3:-60770081 | MS.gene070789:CDS |
| GGAGTCTCGTGCAAGCGTTA+TGG | 0.527348 | 7.3:-60762154 | MS.gene070789:CDS |
| ATATCTTGATATAGATTCTA+CGG | 0.527564 | 7.3:-60767413 | MS.gene070789:CDS |
| TGTCGGCCGAGGGATCAGGC+CGG | 0.531281 | 7.3:-60770250 | MS.gene070789:CDS |
| GCTTGAGATGAGGACCGTTA+TGG | 0.532599 | 7.3:-60762106 | MS.gene070789:CDS |
| GATCCCTCGGCCGACATCCA+CGG | 0.533638 | 7.3:+60770257 | None:intergenic |
| GTTGTTCATACCTGAAGAAG+AGG | 0.535021 | 7.3:+60763143 | None:intergenic |
| GGCTTTGGTGGTACCGCGGG+CGG | 0.535089 | 7.3:-60770280 | MS.gene070789:CDS |
| GAAAGTAAGAAGACGAGATG+TGG | 0.538585 | 7.3:+60770368 | None:intergenic |
| CTTCTGCGTCAATGAAATGT+CGG | 0.540051 | 7.3:+60762896 | None:intergenic |
| GAAGCTGTCCTCTGAAGAGA+TGG | 0.540402 | 7.3:+60763571 | None:intergenic |
| TTATTAACTCTCCGGTTCTG+CGG | 0.543018 | 7.3:+60770312 | None:intergenic |
| CGGTTCTGCGGGAAAATGAA+GGG | 0.546442 | 7.3:+60770324 | None:intergenic |
| AACCCTTATCAAGTATTCTC+CGG | 0.547018 | 7.3:+60768278 | None:intergenic |
| ATGAAGGGTTTGTGAAAGGA+GGG | 0.547270 | 7.3:+60770339 | None:intergenic |
| AAGGAATCGAAGAAGAGAGA+TGG | 0.549759 | 7.3:-60767664 | MS.gene070789:CDS |
| TTTATACCATGGAAGGTACT+GGG | 0.550511 | 7.3:-60767878 | MS.gene070789:intron |
| GAACCGGAGAGTTAATAAAA+GGG | 0.551110 | 7.3:-60770307 | MS.gene070789:CDS |
| CGACATTTCATTGACGCAGA+AGG | 0.559673 | 7.3:-60762895 | MS.gene070789:intron |
| GAAAATGAAGGGTTTGTGAA+AGG | 0.559951 | 7.3:+60770335 | None:intergenic |
| ATAGGTTTCCATCTCTTCAG+AGG | 0.563232 | 7.3:-60763579 | MS.gene070789:CDS |
| TTTATATTTATCCAGAGAAG+TGG | 0.563331 | 7.3:-60763210 | MS.gene070789:intron |
| AATGAAGGGTTTGTGAAAGG+AGG | 0.564256 | 7.3:+60770338 | None:intergenic |
| CCATCAAATCGTAATAGCAC+AGG | 0.567359 | 7.3:+60764005 | None:intergenic |
| GGAGACGGTGATCCCAATCA+AGG | 0.567506 | 7.3:-60767683 | MS.gene070789:CDS |
| CATATTACAATAGAAGGCGG+AGG | 0.569003 | 7.3:-60767852 | MS.gene070789:CDS |
| GACGACAATCGTGGGAGACG+TGG | 0.569449 | 7.3:-60768082 | MS.gene070789:CDS |
| AGATTCTACGGAGAGAATCA+AGG | 0.574810 | 7.3:-60767401 | MS.gene070789:intron |
| TCGGATCAGTGGAGCTCGAG+AGG | 0.580346 | 7.3:-60762071 | MS.gene070789:CDS |
| GTTTGTGCTGCAGGTTTCTG+AGG | 0.588795 | 7.3:-60768480 | MS.gene070789:intron |
| TGCAGTGTAAACAATAACAA+TGG | 0.590958 | 7.3:+60768230 | None:intergenic |
| GATGCTGTTGATGGGTGTGG+TGG | 0.591988 | 7.3:-60770174 | MS.gene070789:CDS |
| ACAAGAGGAAGCAAAATCCA+GGG | 0.594923 | 7.3:+60762204 | None:intergenic |
| GATCAGTGGAGCTTGAGATG+AGG | 0.597013 | 7.3:-60762116 | MS.gene070789:CDS |
| TCAGAGAGAGCATTGGTCGT+TGG | 0.598978 | 7.3:-60763355 | MS.gene070789:CDS |
| AGTAAGAAGACGAGATGTGG+GGG | 0.599643 | 7.3:+60770371 | None:intergenic |
| CCGACATCCACGGCCGCCCG+CGG | 0.601223 | 7.3:+60770267 | None:intergenic |
| CTCTTGTAACCAGCAGCAGA+AGG | 0.604139 | 7.3:-60768200 | MS.gene070789:intron |
| TCACTTTCCACCACACCACC+CGG | 0.606450 | 7.3:+60770231 | None:intergenic |
| TACAGTGAAGACGACAATCG+TGG | 0.617213 | 7.3:-60768091 | MS.gene070789:intron |
| TTCCTCATCAGAGAGAGCAT+TGG | 0.622683 | 7.3:-60763362 | MS.gene070789:CDS |
| GGCCGAGGGATCAGGCCGGG+TGG | 0.626354 | 7.3:-60770246 | MS.gene070789:CDS |
| GACCAATGCTCTCTCTGATG+AGG | 0.628332 | 7.3:+60763360 | None:intergenic |
| CAATACATCGCATCTAATGG+TGG | 0.629551 | 7.3:-60767463 | MS.gene070789:CDS |
| AAGTAAGAAGACGAGATGTG+GGG | 0.633427 | 7.3:+60770370 | None:intergenic |
| AAGCACAAACGAGATCGTTG+TGG | 0.634992 | 7.3:-60762175 | MS.gene070789:CDS |
| AACCGGAGAGTTAATAAAAG+GGG | 0.635007 | 7.3:-60770306 | MS.gene070789:CDS |
| CAAGAGGAAGCAAAATCCAG+GGG | 0.636643 | 7.3:+60762205 | None:intergenic |
| GACAATCGTGGGAGACGTGG+AGG | 0.638781 | 7.3:-60768079 | MS.gene070789:CDS |
| GGACTATGGATGCTGTTGAT+GGG | 0.640916 | 7.3:-60770182 | MS.gene070789:CDS |
| TCAACCTGTTGTTGATGAAG+AGG | 0.642070 | 7.3:-60763982 | MS.gene070789:intron |
| ATATTACAATAGAAGGCGGA+GGG | 0.647278 | 7.3:-60767851 | MS.gene070789:CDS |
| CTGAAGAAGAGGAAATATGT+CGG | 0.650645 | 7.3:+60763154 | None:intergenic |
| GCATTGGTCGTTGGTCTGGG+AGG | 0.656815 | 7.3:-60763346 | MS.gene070789:CDS |
| ACAGTGAAGACGACAATCGT+GGG | 0.659808 | 7.3:-60768090 | MS.gene070789:intron |
| ATCCATATTACAATAGAAGG+CGG | 0.663297 | 7.3:-60767855 | MS.gene070789:CDS |
| TTTGTGCTTACAGACACAAG+AGG | 0.674814 | 7.3:+60762189 | None:intergenic |
| ACCGGAGAGTTAATAAAAGG+GGG | 0.690234 | 7.3:-60770305 | MS.gene070789:CDS |
| GTGAAGAGCCTACTTCAACA+TGG | 0.692925 | 7.3:+60763291 | None:intergenic |
| ATCACCGTCTCCAAACACAA+AGG | 0.736992 | 7.3:+60767694 | None:intergenic |
| AAGAGGAAGCAAAATCCAGG+GGG | 0.753686 | 7.3:+60762206 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 60762056 | 60770424 | 60762056 | ID=MS.gene070789 |
| chr7.3 | mRNA | 60762056 | 60770424 | 60762056 | ID=MS.gene070789.t1;Parent=MS.gene070789 |
| chr7.3 | exon | 60770071 | 60770424 | 60770071 | ID=MS.gene070789.t1.exon1;Parent=MS.gene070789.t1 |
| chr7.3 | CDS | 60770071 | 60770424 | 60770071 | ID=cds.MS.gene070789.t1;Parent=MS.gene070789.t1 |
| chr7.3 | exon | 60768382 | 60768489 | 60768382 | ID=MS.gene070789.t1.exon2;Parent=MS.gene070789.t1 |
| chr7.3 | CDS | 60768382 | 60768489 | 60768382 | ID=cds.MS.gene070789.t1;Parent=MS.gene070789.t1 |
| chr7.3 | exon | 60768201 | 60768304 | 60768201 | ID=MS.gene070789.t1.exon3;Parent=MS.gene070789.t1 |
| chr7.3 | CDS | 60768201 | 60768304 | 60768201 | ID=cds.MS.gene070789.t1;Parent=MS.gene070789.t1 |
| chr7.3 | exon | 60768025 | 60768108 | 60768025 | ID=MS.gene070789.t1.exon4;Parent=MS.gene070789.t1 |
| chr7.3 | CDS | 60768025 | 60768108 | 60768025 | ID=cds.MS.gene070789.t1;Parent=MS.gene070789.t1 |
| chr7.3 | exon | 60767813 | 60767885 | 60767813 | ID=MS.gene070789.t1.exon5;Parent=MS.gene070789.t1 |
| chr7.3 | CDS | 60767813 | 60767885 | 60767813 | ID=cds.MS.gene070789.t1;Parent=MS.gene070789.t1 |
| chr7.3 | exon | 60767658 | 60767723 | 60767658 | ID=MS.gene070789.t1.exon6;Parent=MS.gene070789.t1 |
| chr7.3 | CDS | 60767658 | 60767723 | 60767658 | ID=cds.MS.gene070789.t1;Parent=MS.gene070789.t1 |
| chr7.3 | exon | 60767402 | 60767491 | 60767402 | ID=MS.gene070789.t1.exon7;Parent=MS.gene070789.t1 |
| chr7.3 | CDS | 60767402 | 60767491 | 60767402 | ID=cds.MS.gene070789.t1;Parent=MS.gene070789.t1 |
| chr7.3 | exon | 60763983 | 60764048 | 60763983 | ID=MS.gene070789.t1.exon8;Parent=MS.gene070789.t1 |
| chr7.3 | CDS | 60763983 | 60764048 | 60763983 | ID=cds.MS.gene070789.t1;Parent=MS.gene070789.t1 |
| chr7.3 | exon | 60763475 | 60763614 | 60763475 | ID=MS.gene070789.t1.exon9;Parent=MS.gene070789.t1 |
| chr7.3 | CDS | 60763475 | 60763614 | 60763475 | ID=cds.MS.gene070789.t1;Parent=MS.gene070789.t1 |
| chr7.3 | exon | 60763304 | 60763390 | 60763304 | ID=MS.gene070789.t1.exon10;Parent=MS.gene070789.t1 |
| chr7.3 | CDS | 60763304 | 60763390 | 60763304 | ID=cds.MS.gene070789.t1;Parent=MS.gene070789.t1 |
| chr7.3 | exon | 60763154 | 60763217 | 60763154 | ID=MS.gene070789.t1.exon11;Parent=MS.gene070789.t1 |
| chr7.3 | CDS | 60763154 | 60763217 | 60763154 | ID=cds.MS.gene070789.t1;Parent=MS.gene070789.t1 |
| chr7.3 | exon | 60762896 | 60763039 | 60762896 | ID=MS.gene070789.t1.exon12;Parent=MS.gene070789.t1 |
| chr7.3 | CDS | 60762896 | 60763039 | 60762896 | ID=cds.MS.gene070789.t1;Parent=MS.gene070789.t1 |
| chr7.3 | exon | 60762056 | 60762244 | 60762056 | ID=MS.gene070789.t1.exon13;Parent=MS.gene070789.t1 |
| chr7.3 | CDS | 60762056 | 60762244 | 60762056 | ID=cds.MS.gene070789.t1;Parent=MS.gene070789.t1 |
| Gene Sequence |
| Protein sequence |
