AlfalfaGEDB | MS.gene072872

M. sativa cultivar XinJiangDaYe / MS.gene072872

KEGG: -
GO: -
PFAM: PF14547.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene072872.t1	XP_003603363.1	96.2	131	2	2	1	130	1	129	2.70E-47	198

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene072872.t1	Q39176	60.9	87	32	2	45	130	83	168	2.8e-24	112.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene072872.t1	G7JAH5	96.2	131	2	2	1	130	1	129	2.0e-47	198.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049173	MS.gene072872	0.823755	1.17E-53	-1.69E-46
MS.gene049217	MS.gene072872	0.835517	1.60E-56	-1.69E-46
MS.gene049222	MS.gene072872	0.802671	5.02E-49	-1.69E-46
MS.gene049232	MS.gene072872	0.808903	2.46E-50	-1.69E-46
MS.gene049285	MS.gene072872	0.853558	2.21E-61	-1.69E-46
MS.gene049320	MS.gene072872	0.860054	2.70E-63	-1.69E-46
MS.gene049600	MS.gene072872	0.811084	8.36E-51	-1.69E-46
MS.gene049828	MS.gene072872	0.821695	3.52E-53	-1.69E-46
MS.gene05010	MS.gene072872	0.80315	4.00E-49	-1.69E-46
MS.gene050163	MS.gene072872	0.864961	8.34E-65	-1.69E-46
MS.gene050165	MS.gene072872	0.850795	1.35E-60	-1.69E-46
MS.gene050216	MS.gene072872	0.81042	1.16E-50	-1.69E-46
MS.gene050333	MS.gene072872	0.822481	2.31E-53	-1.69E-46
MS.gene050504	MS.gene072872	0.843281	1.54E-58	-1.69E-46
MS.gene050518	MS.gene072872	0.838725	2.43E-57	-1.69E-46
MS.gene050581	MS.gene072872	0.847356	1.22E-59	-1.69E-46
MS.gene050612	MS.gene072872	0.833186	6.16E-56	-1.69E-46
MS.gene050675	MS.gene072872	0.816837	4.50E-52	-1.69E-46
MS.gene050686	MS.gene072872	0.811244	7.72E-51	-1.69E-46
MS.gene050699	MS.gene072872	0.801559	8.51E-49	-1.69E-46
MS.gene050767	MS.gene072872	0.852407	4.71E-61	-1.69E-46
MS.gene050770	MS.gene072872	0.84966	2.80E-60	-1.69E-46
MS.gene050772	MS.gene072872	0.826295	2.93E-54	-1.69E-46
MS.gene050986	MS.gene072872	0.830832	2.35E-55	-1.69E-46
MS.gene05100	MS.gene072872	0.858758	6.61E-63	-1.69E-46
MS.gene05118	MS.gene072872	0.800383	1.48E-48	-1.69E-46
MS.gene051228	MS.gene072872	0.800484	1.41E-48	-1.69E-46
MS.gene051509	MS.gene072872	0.801181	1.02E-48	-1.69E-46
MS.gene051551	MS.gene072872	0.82869	7.82E-55	-1.69E-46
MS.gene051810	MS.gene072872	0.868721	5.29E-66	-1.69E-46
MS.gene052164	MS.gene072872	0.810185	1.31E-50	-1.69E-46
MS.gene052271	MS.gene072872	0.884397	1.99E-71	-1.69E-46
MS.gene052916	MS.gene072872	0.809919	1.49E-50	-1.69E-46
MS.gene053009	MS.gene072872	0.868454	6.45E-66	-1.69E-46
MS.gene053018	MS.gene072872	0.800675	1.29E-48	-1.69E-46
MS.gene053213	MS.gene072872	0.834109	3.62E-56	-1.69E-46
MS.gene053286	MS.gene072872	0.83348	5.20E-56	-1.69E-46
MS.gene053322	MS.gene072872	0.823692	1.21E-53	-1.69E-46
MS.gene053574	MS.gene072872	0.821511	3.88E-53	-1.69E-46
MS.gene053632	MS.gene072872	0.832891	7.30E-56	-1.69E-46
MS.gene053813	MS.gene072872	0.821558	3.79E-53	-1.69E-46
MS.gene053916	MS.gene072872	0.819363	1.21E-52	-1.69E-46
MS.gene054376	MS.gene072872	0.820351	7.18E-53	-1.69E-46
MS.gene054642	MS.gene072872	0.866431	2.87E-65	-1.69E-46
MS.gene054954	MS.gene072872	0.850604	1.53E-60	-1.69E-46
MS.gene05505	MS.gene072872	0.804432	2.17E-49	-1.69E-46
MS.gene055254	MS.gene072872	0.808861	2.52E-50	-1.69E-46
MS.gene055362	MS.gene072872	0.840239	9.80E-58	-1.69E-46
MS.gene055397	MS.gene072872	0.847465	1.14E-59	-1.69E-46
MS.gene055499	MS.gene072872	0.853026	3.14E-61	-1.69E-46
MS.gene055502	MS.gene072872	0.815559	8.69E-52	-1.69E-46
MS.gene055647	MS.gene072872	0.807641	4.58E-50	-1.69E-46
MS.gene055722	MS.gene072872	0.835107	2.03E-56	-1.69E-46
MS.gene05592	MS.gene072872	0.813808	2.12E-51	-1.69E-46
MS.gene056083	MS.gene072872	0.80566	1.20E-49	-1.69E-46
MS.gene056374	MS.gene072872	0.849843	2.49E-60	-1.69E-46
MS.gene056510	MS.gene072872	0.809419	1.91E-50	-1.69E-46
MS.gene056657	MS.gene072872	0.866983	1.91E-65	-1.69E-46
MS.gene056942	MS.gene072872	0.807734	4.37E-50	-1.69E-46
MS.gene057129	MS.gene072872	0.854813	9.59E-62	-1.69E-46
MS.gene057416	MS.gene072872	0.807617	4.63E-50	-1.69E-46
MS.gene058419	MS.gene072872	0.845383	4.20E-59	-1.69E-46
MS.gene058459	MS.gene072872	0.811868	5.64E-51	-1.69E-46
MS.gene058723	MS.gene072872	0.846018	2.83E-59	-1.69E-46
MS.gene058773	MS.gene072872	0.813003	3.19E-51	-1.69E-46
MS.gene058903	MS.gene072872	0.805076	1.59E-49	-1.69E-46
MS.gene059022	MS.gene072872	0.85278	3.69E-61	-1.69E-46
MS.gene059029	MS.gene072872	0.811233	7.76E-51	-1.69E-46
MS.gene05913	MS.gene072872	0.82702	1.97E-54	-1.69E-46
MS.gene059367	MS.gene072872	0.804111	2.53E-49	-1.69E-46
MS.gene059677	MS.gene072872	0.843727	1.17E-58	-1.69E-46
MS.gene059711	MS.gene072872	0.801852	7.41E-49	-1.69E-46
MS.gene059718	MS.gene072872	0.826469	2.67E-54	-1.69E-46
MS.gene059865	MS.gene072872	0.832178	1.10E-55	-1.69E-46
MS.gene060341	MS.gene072872	0.802503	5.44E-49	-1.69E-46
MS.gene060356	MS.gene072872	0.845905	3.03E-59	-1.69E-46
MS.gene060482	MS.gene072872	0.826305	2.92E-54	-1.69E-46
MS.gene060703	MS.gene072872	0.811225	7.79E-51	-1.69E-46
MS.gene061134	MS.gene072872	0.820469	6.75E-53	-1.69E-46
MS.gene061200	MS.gene072872	0.858076	1.06E-62	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene072872.t1	MTR_3g106750	95.420	131	3	2	1	130	1	129	2.33e-63	189
MS.gene072872.t1	MTR_3g106740	74.615	130	31	2	1	129	1	129	2.05e-56	172
MS.gene072872.t1	MTR_1g012690	57.325	157	37	4	1	130	1	154	1.94e-50	157
MS.gene072872.t1	MTR_1g012700	56.627	166	34	4	1	130	1	164	2.16e-49	155
MS.gene072872.t1	MTR_1g012710	60.784	153	35	3	1	130	1	151	1.01e-44	143
MS.gene072872.t1	MTR_1g012630	79.762	84	16	1	47	130	128	210	1.74e-41	137
MS.gene072872.t1	MTR_4g108150	50.820	122	56	2	9	130	6	123	6.67e-33	112
MS.gene072872.t1	MTR_4g101260	63.095	84	30	1	47	130	50	132	4.88e-31	107
MS.gene072872.t1	MTR_4g101330	40.588	170	58	6	1	129	1	168	2.60e-29	104
MS.gene072872.t1	MTR_4g101280	56.818	88	36	2	44	130	57	143	9.70e-29	102
MS.gene072872.t1	MTR_2g026760	47.619	126	61	3	4	129	6	126	1.38e-28	101
MS.gene072872.t1	MTR_4g101310	57.647	85	34	2	47	130	51	134	8.93e-28	99.8
MS.gene072872.t1	MTR_4g101270	57.143	84	33	3	47	129	105	186	1.58e-22	87.8
MS.gene072872.t1	MTR_5g012340	47.619	84	41	2	47	129	95	176	1.70e-22	87.4
MS.gene072872.t1	MTR_5g012380	46.429	84	42	2	47	129	88	169	7.90e-22	85.5
MS.gene072872.t1	MTR_2g026930	48.750	80	38	2	50	129	122	198	1.57e-16	72.4
MS.gene072872.t1	MTR_2g026920	48.750	80	38	2	50	129	118	194	1.70e-16	72.4
MS.gene072872.t1	MTR_3g082100	46.512	86	45	1	44	129	251	335	1.26e-15	72.0
MS.gene072872.t1	MTR_2g026775	41.772	79	40	3	54	130	686	760	6.78e-13	64.7
MS.gene072872.t1	MTR_4g115360	48.235	85	41	3	47	130	151	233	2.63e-11	58.9
MS.gene072872.t1	MTR_2g026820	52.778	72	27	4	52	121	542	608	3.67e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene072872.t1	AT2G45180	69.048	84	25	1	47	130	52	134	4.20e-34	115
MS.gene072872.t1	AT4G12490	60.000	95	36	2	37	130	89	182	5.62e-32	112
MS.gene072872.t1	AT4G12500	38.764	178	60	4	1	130	1	177	1.85e-31	110
MS.gene072872.t1	AT4G12480	60.920	87	32	2	45	130	83	168	5.27e-31	108
MS.gene072872.t1	AT4G12470	58.889	90	35	2	42	130	73	161	8.28e-31	108
MS.gene072872.t1	AT5G46900	63.736	91	29	2	40	130	41	127	3.19e-30	105
MS.gene072872.t1	AT1G62510	61.176	85	31	2	46	129	66	149	1.55e-29	104
MS.gene072872.t1	AT5G46890	61.053	95	33	3	36	130	37	127	1.19e-28	101
MS.gene072872.t1	AT1G12090	62.195	82	29	2	49	129	57	137	1.30e-28	102
MS.gene072872.t1	AT4G12520	52.893	121	53	3	11	130	12	129	4.78e-28	100
MS.gene072872.t1	AT4G12510	52.893	121	53	3	11	130	12	129	4.78e-28	100
MS.gene072872.t1	AT4G12550	50.000	92	44	2	40	130	21	111	4.52e-26	94.7
MS.gene072872.t1	AT4G00165	47.664	107	51	3	27	129	23	128	5.45e-26	95.1
MS.gene072872.t1	AT4G00165	47.664	107	51	3	27	129	23	128	5.45e-26	95.1
MS.gene072872.t1	AT1G12100	41.129	124	70	3	9	130	10	132	8.98e-26	94.7
MS.gene072872.t1	AT4G22460	48.571	105	49	2	28	128	28	131	2.15e-25	93.6
MS.gene072872.t1	AT4G12530	50.000	86	42	1	44	129	31	115	5.32e-23	87.0
MS.gene072872.t1	AT4G12545	50.000	92	41	3	40	130	21	108	6.03e-23	86.7
MS.gene072872.t1	AT3G22142	52.381	84	37	3	47	129	1397	1478	2.04e-20	86.3
MS.gene072872.t1	AT3G22120	51.190	84	39	2	47	129	267	349	5.72e-19	81.3
MS.gene072872.t1	AT3G22120	51.190	84	39	2	47	129	250	332	1.18e-18	80.1
MS.gene072872.t1	AT2G10940	47.727	88	43	3	44	130	205	290	1.24e-18	79.7
MS.gene072872.t1	AT2G10940	47.727	88	43	3	44	130	205	290	1.24e-18	79.7
MS.gene072872.t1	AT4G15160	49.412	85	40	3	47	129	99	182	4.34e-17	73.9
MS.gene072872.t1	AT4G15160	49.412	85	40	3	47	129	181	264	1.11e-16	74.3
MS.gene072872.t1	AT1G62500	42.529	87	47	3	44	129	209	293	6.54e-15	69.7
MS.gene072872.t1	AT4G22490	37.634	93	54	3	38	129	27	116	8.04e-15	66.2

Find 44 sgRNAs with CRISPR-Local

Find 47 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCCTAACTTTAAGGTATCTT+TGG	0.166346	3.2:+87426927	None:intergenic
AGCACAAACCCCTAACTTTA+AGG	0.205248	3.2:+87426918	None:intergenic
ATCTTTGGGGCAGTGACCTT+GGG	0.214560	3.2:+87426942	None:intergenic
TTGTCTTTGCACTGCAATTA+AGG	0.231170	3.2:-87426797	MS.gene072872:CDS
AATCAAAGGTTTGGCTGATT+TGG	0.237754	3.2:-87426830	MS.gene072872:CDS
TAAAATGGTGGCAAAGAATT+TGG	0.290687	3.2:+87427056	None:intergenic
CCTAACTTTAAGGTATCTTT+GGG	0.293316	3.2:+87426928	None:intergenic
GAAGGTGTTGGCTTTGGCTT+TGG	0.296299	3.2:+87426967	None:intergenic
TGGGGTGAAGGTGTTGGCTT+TGG	0.321997	3.2:+87426961	None:intergenic
CCCAAAGATACCTTAAAGTT+AGG	0.331524	3.2:-87426928	MS.gene072872:CDS
GTTGGCTTTGGCTTTGGCTT+TGG	0.335137	3.2:+87426973	None:intergenic
TATCTTTGGGGCAGTGACCT+TGG	0.380498	3.2:+87426941	None:intergenic
CCAAAGATACCTTAAAGTTA+GGG	0.385359	3.2:-87426927	MS.gene072872:CDS
AGGATCCAGGTGAGGGTGAT+AGG	0.388310	3.2:+87426745	None:intergenic
GGGCAGTGACCTTGGGGTGA+AGG	0.389809	3.2:+87426949	None:intergenic
AAGGAGAGAGAGTACTAAAA+TGG	0.390388	3.2:+87427041	None:intergenic
ATCACCCTCACCTGGATCCT+TGG	0.406696	3.2:-87426742	MS.gene072872:CDS
GTTGTTGGGAATCCTGCTTC+AGG	0.413980	3.2:-87426871	MS.gene072872:CDS
TTTGGCTTTGGCTTTGGTGA+TGG	0.416452	3.2:+87426979	None:intergenic
CTCAACATTTACTGAGGCTA+AGG	0.420857	3.2:-87427013	MS.gene072872:CDS
TTGACAAGCACCAAGGATCC+AGG	0.457767	3.2:+87426732	None:intergenic
GACTGGTTAATGTTGTTGTT+GGG	0.463209	3.2:-87426885	MS.gene072872:CDS
TTGTGCAATAATCAAAGGTT+TGG	0.466120	3.2:-87426839	MS.gene072872:CDS
GGACTGGTTAATGTTGTTGT+TGG	0.480624	3.2:-87426886	MS.gene072872:CDS
TGACCTTGGGGTGAAGGTGT+TGG	0.502306	3.2:+87426955	None:intergenic
AATTGTTGTGCAATAATCAA+AGG	0.523157	3.2:-87426844	MS.gene072872:CDS
GCAATTAAGGCCAATGTGCT+CGG	0.533371	3.2:-87426784	MS.gene072872:CDS
TCTTTGGGGCAGTGACCTTG+GGG	0.545751	3.2:+87426943	None:intergenic
CCTTAGGCACATTGAAAACC+AGG	0.555069	3.2:+87426697	None:intergenic
CAAAGATACCTTAAAGTTAG+GGG	0.560461	3.2:-87426926	MS.gene072872:CDS
ATGTACCTATCACCCTCACC+TGG	0.591606	3.2:-87426750	MS.gene072872:CDS
CAGTAAATGTTGAGTAAGCA+AGG	0.592270	3.2:+87427022	None:intergenic
TCAACATTTACTGAGGCTAA+GGG	0.596026	3.2:-87427012	MS.gene072872:CDS
CAAGTTTATTCCGAGCACAT+TGG	0.596849	3.2:+87426774	None:intergenic
GGTGGCAAAGAATTTGGTGT+TGG	0.599992	3.2:+87427062	None:intergenic
CAACAATTACTACCTGAAGC+AGG	0.602543	3.2:+87426859	None:intergenic
AGCACCAAGGATCCAGGTGA+GGG	0.612333	3.2:+87426738	None:intergenic
AAGCCAACACCTTCACCCCA+AGG	0.614009	3.2:-87426958	MS.gene072872:CDS
TGCTTACTCAACATTTACTG+AGG	0.622636	3.2:-87427019	MS.gene072872:CDS
GAGAGAGAGTACTAAAATGG+TGG	0.630559	3.2:+87427044	None:intergenic
AAGCACCAAGGATCCAGGTG+AGG	0.645068	3.2:+87426737	None:intergenic
AGGCACATTGAAAACCAGGA+GGG	0.674973	3.2:+87426701	None:intergenic
CTAACTTTAAGGTATCTTTG+GGG	0.708820	3.2:+87426929	None:intergenic
TAGGCACATTGAAAACCAGG+AGG	0.727521	3.2:+87426700	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	AATTGTTGTGCAATAATCAA+AGG	-	chr3.2:87426924-87426943	MS.gene072872:CDS	25.0%
	CAAAGATACCTTAAAGTTAG+GGG	-	chr3.2:87426842-87426861	MS.gene072872:CDS	30.0%
	CCAAAGATACCTTAAAGTTA+GGG	-	chr3.2:87426841-87426860	MS.gene072872:CDS	30.0%
	TAAAATGGTGGCAAAGAATT+TGG	+	chr3.2:87426715-87426734	None:intergenic	30.0%
	TTGTGCAATAATCAAAGGTT+TGG	-	chr3.2:87426929-87426948	MS.gene072872:CDS	30.0%
!!	CCTAACTTTAAGGTATCTTT+GGG	+	chr3.2:87426843-87426862	None:intergenic	30.0%
!!	CTAACTTTAAGGTATCTTTG+GGG	+	chr3.2:87426842-87426861	None:intergenic	30.0%
	AATCAAAGGTTTGGCTGATT+TGG	-	chr3.2:87426938-87426957	MS.gene072872:CDS	35.0%
	CAGTAAATGTTGAGTAAGCA+AGG	+	chr3.2:87426749-87426768	None:intergenic	35.0%
	CCCAAAGATACCTTAAAGTT+AGG	-	chr3.2:87426840-87426859	MS.gene072872:CDS	35.0%
	TCAACATTTACTGAGGCTAA+GGG	-	chr3.2:87426756-87426775	MS.gene072872:CDS	35.0%
	TGCTTACTCAACATTTACTG+AGG	-	chr3.2:87426749-87426768	MS.gene072872:CDS	35.0%
	TTGTCTTTGCACTGCAATTA+AGG	-	chr3.2:87426971-87426990	MS.gene072872:CDS	35.0%
!	GACTGGTTAATGTTGTTGTT+GGG	-	chr3.2:87426883-87426902	MS.gene072872:CDS	35.0%
!!	AAGGAGAGAGAGTACTAAAA+TGG	+	chr3.2:87426730-87426749	None:intergenic	35.0%
!!	CCCTAACTTTAAGGTATCTT+TGG	+	chr3.2:87426844-87426863	None:intergenic	35.0%
!!!	TTGTTTTTTGACAAGCACCA+AGG	+	chr3.2:87427046-87427065	None:intergenic	35.0%
	AGCACAAACCCCTAACTTTA+AGG	+	chr3.2:87426853-87426872	None:intergenic	40.0%
	CAACAATTACTACCTGAAGC+AGG	+	chr3.2:87426912-87426931	None:intergenic	40.0%
	CAAGTTTATTCCGAGCACAT+TGG	+	chr3.2:87426997-87427016	None:intergenic	40.0%
	CTCAACATTTACTGAGGCTA+AGG	-	chr3.2:87426755-87426774	MS.gene072872:CDS	40.0%
	TGTCAAAAAACAATCCCTCC+TGG	-	chr3.2:87427053-87427072	MS.gene072872:CDS	40.0%
!!	GAGAGAGAGTACTAAAATGG+TGG	+	chr3.2:87426727-87426746	None:intergenic	40.0%
!!	GGACTGGTTAATGTTGTTGT+TGG	-	chr3.2:87426882-87426901	MS.gene072872:CDS	40.0%
!!!	TTGTGCTGATGTTTTAGGAC+TGG	-	chr3.2:87426866-87426885	MS.gene072872:CDS	40.0%
	AGGCACATTGAAAACCAGGA+GGG	+	chr3.2:87427070-87427089	None:intergenic	45.0%
	GCAATTAAGGCCAATGTGCT+CGG	-	chr3.2:87426984-87427003	MS.gene072872:CDS	45.0%
	TAGGCACATTGAAAACCAGG+AGG	+	chr3.2:87427071-87427090	None:intergenic	45.0%
!!	GGGGTTTGTGCTGATGTTTT+AGG	-	chr3.2:87426861-87426880	MS.gene072872:CDS	45.0%
!!	GGTGGCAAAGAATTTGGTGT+TGG	+	chr3.2:87426709-87426728	None:intergenic	45.0%
!!	TTTGGCTTTGGCTTTGGTGA+TGG	+	chr3.2:87426792-87426811	None:intergenic	45.0%
	ATGTACCTATCACCCTCACC+TGG	-	chr3.2:87427018-87427037	MS.gene072872:CDS	50.0%
	GTTGTTGGGAATCCTGCTTC+AGG	-	chr3.2:87426897-87426916	MS.gene072872:CDS	50.0%
	TTGACAAGCACCAAGGATCC+AGG	+	chr3.2:87427039-87427058	None:intergenic	50.0%
!!	ATCTTTGGGGCAGTGACCTT+GGG	+	chr3.2:87426829-87426848	None:intergenic	50.0%
!!	GAAGGTGTTGGCTTTGGCTT+TGG	+	chr3.2:87426804-87426823	None:intergenic	50.0%
!!	GTTGGCTTTGGCTTTGGCTT+TGG	+	chr3.2:87426798-87426817	None:intergenic	50.0%
!!	TATCTTTGGGGCAGTGACCT+TGG	+	chr3.2:87426830-87426849	None:intergenic	50.0%
	AAGCACCAAGGATCCAGGTG+AGG	+	chr3.2:87427034-87427053	None:intergenic	55.0%
	AAGCCAACACCTTCACCCCA+AGG	-	chr3.2:87426810-87426829	MS.gene072872:CDS	55.0%
	AGCACCAAGGATCCAGGTGA+GGG	+	chr3.2:87427033-87427052	None:intergenic	55.0%
	AGGATCCAGGTGAGGGTGAT+AGG	+	chr3.2:87427026-87427045	None:intergenic	55.0%
	ATCACCCTCACCTGGATCCT+TGG	-	chr3.2:87427026-87427045	MS.gene072872:CDS	55.0%
!	TGACCTTGGGGTGAAGGTGT+TGG	+	chr3.2:87426816-87426835	None:intergenic	55.0%
!!	TCTTTGGGGCAGTGACCTTG+GGG	+	chr3.2:87426828-87426847	None:intergenic	55.0%
!!	TGGGGTGAAGGTGTTGGCTT+TGG	+	chr3.2:87426810-87426829	None:intergenic	55.0%
	GGGCAGTGACCTTGGGGTGA+AGG	+	chr3.2:87426822-87426841	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.2	gene	87426699	87427091	87426699	ID=MS.gene072872
chr3.2	mRNA	87426699	87427091	87426699	ID=MS.gene072872.t1;Parent=MS.gene072872
chr3.2	exon	87426699	87427091	87426699	ID=MS.gene072872.t1.exon1;Parent=MS.gene072872.t1
chr3.2	CDS	87426699	87427091	87426699	ID=cds.MS.gene072872.t1;Parent=MS.gene072872.t1

Gene Sequence

>MS.gene072872

ATGGCTTCCAACACCAAATTCTTTGCCACCATTTTAGTACTCTCTCTCCTTGCTTACTCAACATTTACTGAGGCTAAGGGTTCATGCTCACCATCACCAAAGCCAAAGCCAAAGCCAACACCTTCACCCCAAGGTCACTGCCCCAAAGATACCTTAAAGTTAGGGGTTTGTGCTGATGTTTTAGGACTGGTTAATGTTGTTGTTGGGAATCCTGCTTCAGGTAGTAATTGTTGTGCAATAATCAAAGGTTTGGCTGATTTGGATGCTGCACTTTGTCTTTGCACTGCAATTAAGGCCAATGTGCTCGGAATAAACTTGAATGTACCTATCACCCTCACCTGGATCCTTGGTGCTTGTCAAAAAACAATCCCTCCTGGTTTTCAATGTGCCTAA

Protein sequence

>MS.gene072872.t1

MASNTKFFATILVLSLLAYSTFTEAKGSCSPSPKPKPKPTPSPQGHCPKDTLKLGVCADVLGLVNVVVGNPASGSNCCAIIKGLADLDAALCLCTAIKANVLGINLNVPITLTWILGACQKTIPPGFQCA