Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08806.t1 | AET04137.1 | 93.9 | 443 | 26 | 1 | 1 | 443 | 1 | 442 | 7.40E-185 | 656.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08806.t1 | G7LHU3 | 93.9 | 443 | 26 | 1 | 1 | 443 | 1 | 442 | 5.3e-185 | 656.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene08806 | 0.84692 | 1.60E-59 | -1.69E-46 |
| MS.gene049254 | MS.gene08806 | 0.827084 | 1.90E-54 | -1.69E-46 |
| MS.gene049404 | MS.gene08806 | 0.806119 | 9.60E-50 | -1.69E-46 |
| MS.gene049452 | MS.gene08806 | 0.833175 | 6.20E-56 | -1.69E-46 |
| MS.gene049850 | MS.gene08806 | 0.805497 | 1.30E-49 | -1.69E-46 |
| MS.gene049983 | MS.gene08806 | 0.826784 | 2.24E-54 | -1.69E-46 |
| MS.gene050273 | MS.gene08806 | 0.820749 | 5.82E-53 | -1.69E-46 |
| MS.gene050442 | MS.gene08806 | 0.802526 | 5.38E-49 | -1.69E-46 |
| MS.gene050750 | MS.gene08806 | 0.81938 | 1.20E-52 | -1.69E-46 |
| MS.gene050759 | MS.gene08806 | 0.813055 | 3.11E-51 | -1.69E-46 |
| MS.gene050826 | MS.gene08806 | 0.800009 | 1.76E-48 | -1.69E-46 |
| MS.gene050905 | MS.gene08806 | -0.831465 | 1.64E-55 | -1.69E-46 |
| MS.gene050953 | MS.gene08806 | 0.811294 | 7.52E-51 | -1.69E-46 |
| MS.gene050962 | MS.gene08806 | 0.807373 | 5.22E-50 | -1.69E-46 |
| MS.gene051198 | MS.gene08806 | 0.835356 | 1.76E-56 | -1.69E-46 |
| MS.gene051363 | MS.gene08806 | 0.801081 | 1.07E-48 | -1.69E-46 |
| MS.gene051924 | MS.gene08806 | -0.827794 | 1.28E-54 | -1.69E-46 |
| MS.gene051926 | MS.gene08806 | -0.81306 | 3.10E-51 | -1.69E-46 |
| MS.gene052463 | MS.gene08806 | 0.8018 | 7.59E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene08806 | 0.817303 | 3.54E-52 | -1.69E-46 |
| MS.gene052519 | MS.gene08806 | 0.858539 | 7.69E-63 | -1.69E-46 |
| MS.gene052582 | MS.gene08806 | 0.81033 | 1.22E-50 | -1.69E-46 |
| MS.gene052584 | MS.gene08806 | 0.817269 | 3.60E-52 | -1.69E-46 |
| MS.gene052611 | MS.gene08806 | 0.804792 | 1.82E-49 | -1.69E-46 |
| MS.gene052863 | MS.gene08806 | 0.847785 | 9.29E-60 | -1.69E-46 |
| MS.gene052954 | MS.gene08806 | 0.816373 | 5.72E-52 | -1.69E-46 |
| MS.gene053006 | MS.gene08806 | 0.836778 | 7.66E-57 | -1.69E-46 |
| MS.gene053008 | MS.gene08806 | 0.864409 | 1.24E-64 | -1.69E-46 |
| MS.gene053166 | MS.gene08806 | 0.832603 | 8.60E-56 | -1.69E-46 |
| MS.gene053226 | MS.gene08806 | 0.811991 | 5.31E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene08806 | 0.826411 | 2.75E-54 | -1.69E-46 |
| MS.gene054236 | MS.gene08806 | 0.801634 | 8.21E-49 | -1.69E-46 |
| MS.gene054405 | MS.gene08806 | 0.810289 | 1.24E-50 | -1.69E-46 |
| MS.gene054472 | MS.gene08806 | 0.806212 | 9.18E-50 | -1.69E-46 |
| MS.gene054479 | MS.gene08806 | 0.802483 | 5.49E-49 | -1.69E-46 |
| MS.gene054559 | MS.gene08806 | 0.817474 | 3.24E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene08806 | 0.861638 | 8.91E-64 | -1.69E-46 |
| MS.gene054657 | MS.gene08806 | 0.806975 | 6.34E-50 | -1.69E-46 |
| MS.gene054775 | MS.gene08806 | 0.804676 | 1.93E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene08806 | 0.812015 | 5.24E-51 | -1.69E-46 |
| MS.gene05510 | MS.gene08806 | 0.801422 | 9.07E-49 | -1.69E-46 |
| MS.gene05517 | MS.gene08806 | 0.804517 | 2.08E-49 | -1.69E-46 |
| MS.gene055228 | MS.gene08806 | 0.816022 | 6.85E-52 | -1.69E-46 |
| MS.gene055818 | MS.gene08806 | 0.862236 | 5.85E-64 | -1.69E-46 |
| MS.gene055841 | MS.gene08806 | 0.821375 | 4.18E-53 | -1.69E-46 |
| MS.gene055926 | MS.gene08806 | 0.801199 | 1.01E-48 | -1.69E-46 |
| MS.gene056252 | MS.gene08806 | 0.801684 | 8.02E-49 | -1.69E-46 |
| MS.gene056366 | MS.gene08806 | 0.803232 | 3.85E-49 | -1.69E-46 |
| MS.gene056480 | MS.gene08806 | 0.807774 | 4.29E-50 | -1.69E-46 |
| MS.gene056595 | MS.gene08806 | 0.819927 | 8.98E-53 | -1.69E-46 |
| MS.gene056776 | MS.gene08806 | 0.819625 | 1.05E-52 | -1.69E-46 |
| MS.gene05690 | MS.gene08806 | 0.825117 | 5.58E-54 | -1.69E-46 |
| MS.gene057060 | MS.gene08806 | 0.816399 | 5.64E-52 | -1.69E-46 |
| MS.gene057208 | MS.gene08806 | 0.846564 | 2.01E-59 | -1.69E-46 |
| MS.gene057444 | MS.gene08806 | 0.818422 | 1.98E-52 | -1.69E-46 |
| MS.gene057693 | MS.gene08806 | 0.815994 | 6.95E-52 | -1.69E-46 |
| MS.gene057855 | MS.gene08806 | 0.822055 | 2.91E-53 | -1.69E-46 |
| MS.gene058008 | MS.gene08806 | 0.829404 | 5.25E-55 | -1.69E-46 |
| MS.gene058009 | MS.gene08806 | 0.848028 | 7.96E-60 | -1.69E-46 |
| MS.gene058010 | MS.gene08806 | 0.824918 | 6.22E-54 | -1.69E-46 |
| MS.gene058037 | MS.gene08806 | 0.801238 | 9.90E-49 | -1.69E-46 |
| MS.gene058088 | MS.gene08806 | 0.813225 | 2.85E-51 | -1.69E-46 |
| MS.gene058548 | MS.gene08806 | 0.82621 | 3.07E-54 | -1.69E-46 |
| MS.gene058625 | MS.gene08806 | 0.843828 | 1.10E-58 | -1.69E-46 |
| MS.gene058781 | MS.gene08806 | 0.824784 | 6.69E-54 | -1.69E-46 |
| MS.gene058783 | MS.gene08806 | 0.861759 | 8.18E-64 | -1.69E-46 |
| MS.gene058979 | MS.gene08806 | 0.847243 | 1.31E-59 | -1.69E-46 |
| MS.gene059283 | MS.gene08806 | 0.80009 | 1.70E-48 | -1.69E-46 |
| MS.gene05979 | MS.gene08806 | 0.827102 | 1.88E-54 | -1.69E-46 |
| MS.gene059842 | MS.gene08806 | 0.855237 | 7.22E-62 | -1.69E-46 |
| MS.gene060011 | MS.gene08806 | 0.847945 | 8.38E-60 | -1.69E-46 |
| MS.gene060310 | MS.gene08806 | 0.815571 | 8.64E-52 | -1.69E-46 |
| MS.gene060322 | MS.gene08806 | 0.850243 | 1.93E-60 | -1.69E-46 |
| MS.gene06052 | MS.gene08806 | 0.821794 | 3.34E-53 | -1.69E-46 |
| MS.gene060683 | MS.gene08806 | 0.801374 | 9.28E-49 | -1.69E-46 |
| MS.gene060685 | MS.gene08806 | 0.809274 | 2.05E-50 | -1.69E-46 |
| MS.gene060802 | MS.gene08806 | 0.804379 | 2.22E-49 | -1.69E-46 |
| MS.gene060803 | MS.gene08806 | 0.842801 | 2.07E-58 | -1.69E-46 |
| MS.gene060932 | MS.gene08806 | 0.815949 | 7.11E-52 | -1.69E-46 |
| MS.gene060935 | MS.gene08806 | 0.823019 | 1.74E-53 | -1.69E-46 |
| MS.gene060937 | MS.gene08806 | 0.804107 | 2.53E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08806.t1 | MTR_8g085190 | 96.840 | 443 | 13 | 1 | 1 | 443 | 1 | 442 | 0.0 | 874 |
| MS.gene08806.t1 | MTR_5g079680 | 54.918 | 122 | 46 | 1 | 5 | 126 | 2 | 114 | 3.57e-41 | 149 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 165 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGTCCATTTCTTCCTTCT+TGG | 0.160653 | 4.2:+13037252 | None:intergenic |
| GATAATGAGGTGATAGGTTT+AGG | 0.216881 | 4.2:-13036697 | MS.gene08806:CDS |
| AATAATGAGTTGTTAGGATT+TGG | 0.218370 | 4.2:-13036850 | MS.gene08806:CDS |
| CAAAATTTGCATCATGTAAA+TGG | 0.242690 | 4.2:-13036019 | MS.gene08806:CDS |
| ATAATGAGTTGTTAGGATTT+GGG | 0.254136 | 4.2:-13036849 | MS.gene08806:CDS |
| TTTGGGCATATGGGTCATTC+AGG | 0.261206 | 4.2:-13036760 | MS.gene08806:CDS |
| GAAGATCAATTCATTGTTGA+TGG | 0.290026 | 4.2:-13035956 | MS.gene08806:CDS |
| TTTCACCATACTTGTCGATT+AGG | 0.298708 | 4.2:+13037214 | None:intergenic |
| TTCACCATACTTGTCGATTA+GGG | 0.311119 | 4.2:+13037215 | None:intergenic |
| TCATTCAGGGGATGGGGATG+GGG | 0.319704 | 4.2:-13036746 | MS.gene08806:CDS |
| ATAATGAGGTGATAGGTTTA+GGG | 0.324740 | 4.2:-13036696 | MS.gene08806:CDS |
| GGAAAAGGAGAGGGAGGAAA+GGG | 0.326049 | 4.2:-13036380 | MS.gene08806:CDS |
| GCATCATTTGTGAAAGATAA+TGG | 0.330244 | 4.2:+13036041 | None:intergenic |
| TTCCTTCTTGGAGGAATCAT+TGG | 0.332591 | 4.2:+13037264 | None:intergenic |
| AGGTTTAGGGTTTGAGTATG+AGG | 0.332722 | 4.2:-13036683 | MS.gene08806:CDS |
| AGGATTTGGGGACGGCGATC+GGG | 0.335634 | 4.2:-13036836 | MS.gene08806:CDS |
| AAATCAGCACCGAGCAGAAA+TGG | 0.353850 | 4.2:-13036182 | MS.gene08806:CDS |
| GGAGATCGAGATGGGTTTCT+TGG | 0.355872 | 4.2:-13036814 | MS.gene08806:CDS |
| GGGTTTCTTGGTAGTGGTGG+TGG | 0.361161 | 4.2:-13036802 | MS.gene08806:CDS |
| GGGAAAAGGAGAGGGAGGAA+AGG | 0.364519 | 4.2:-13036381 | MS.gene08806:CDS |
| GATTGCTTGTTATGTGAATT+CGG | 0.367637 | 4.2:-13037136 | MS.gene08806:CDS |
| GGTGGAAATAATGAGTTGTT+AGG | 0.371046 | 4.2:-13036856 | MS.gene08806:CDS |
| TATGACTGAGTTTGGGCATA+TGG | 0.373976 | 4.2:-13036770 | MS.gene08806:CDS |
| GGGAAAAGGTTAGGAGGCAG+AGG | 0.380089 | 4.2:-13036348 | MS.gene08806:CDS |
| GGAATGGATATGACTGAGTT+TGG | 0.381115 | 4.2:-13036778 | MS.gene08806:CDS |
| ATCCGATAGGCCAGCAGGTT+GGG | 0.386802 | 4.2:+13036081 | None:intergenic |
| GGTGATGTTGCACTTGTTGT+TGG | 0.387225 | 4.2:-13036898 | MS.gene08806:CDS |
| GTCCATTTCTTCCTTCTTGG+AGG | 0.388092 | 4.2:+13037255 | None:intergenic |
| GGAGTTGATAATGAGGTGAT+AGG | 0.395706 | 4.2:-13036703 | MS.gene08806:CDS |
| CTCATACACATAACCATTCT+CGG | 0.397651 | 4.2:+13036609 | None:intergenic |
| TTTCTGGTGGGGAGTGTGAT+GGG | 0.402679 | 4.2:-13036990 | MS.gene08806:CDS |
| AAAGGGAGCGCGAGAGGCAG+AGG | 0.405523 | 4.2:-13036447 | MS.gene08806:CDS |
| ATGGGAGTAGTGAGTTTGAT+TGG | 0.409811 | 4.2:-13036972 | MS.gene08806:CDS |
| TTCCTCCAAGAAGGAAGAAA+TGG | 0.413290 | 4.2:-13037257 | MS.gene08806:CDS |
| GTTGGGGCAGTTGAGGGAAA+TGG | 0.416951 | 4.2:-13036497 | MS.gene08806:CDS |
| GGATGGAGGGGTTAACTCAT+TGG | 0.420218 | 4.2:-13036951 | MS.gene08806:CDS |
| GTCATTCAGGGGATGGGGAT+GGG | 0.432633 | 4.2:-13036747 | MS.gene08806:CDS |
| GGGAAGAGAGAATGAATTGC+AGG | 0.432882 | 4.2:-13036240 | MS.gene08806:CDS |
| AAAACCCTAATCGACAAGTA+TGG | 0.433688 | 4.2:-13037219 | MS.gene08806:CDS |
| TGGTTATGTGTATGAGGAAG+GGG | 0.434586 | 4.2:-13036602 | MS.gene08806:CDS |
| GAGAATGAATTGCAGGAGGC+TGG | 0.436328 | 4.2:-13036233 | MS.gene08806:CDS |
| GGGAGCGCGAGAGGCAGAGG+AGG | 0.437021 | 4.2:-13036444 | MS.gene08806:CDS |
| GGAGGAAAGGGAGAAGGAGA+GGG | 0.439243 | 4.2:-13036368 | MS.gene08806:CDS |
| GGGAGGAAAGGGAGAAGGAG+AGG | 0.439405 | 4.2:-13036369 | MS.gene08806:CDS |
| TAGGATTTGGGGACGGCGAT+CGG | 0.440786 | 4.2:-13036837 | MS.gene08806:CDS |
| AATCGACAAGTATGGTGAAA+TGG | 0.441441 | 4.2:-13037211 | MS.gene08806:CDS |
| AAGGGAGAAGGAGAGGGAAA+AGG | 0.441479 | 4.2:-13036362 | MS.gene08806:CDS |
| TATGGGTCATTCAGGGGATG+GGG | 0.445632 | 4.2:-13036752 | MS.gene08806:CDS |
| TTTCTTGGTAGTGGTGGTGG+AGG | 0.446839 | 4.2:-13036799 | MS.gene08806:CDS |
| CAGTGGACTGCCCAACCTGC+TGG | 0.450699 | 4.2:-13036091 | MS.gene08806:CDS |
| GCACTTGTTGTTGGTGGTGG+TGG | 0.452572 | 4.2:-13036889 | MS.gene08806:CDS |
| GCGATCCGGTGGTTTATCCT+TGG | 0.454110 | 4.2:-13037101 | MS.gene08806:CDS |
| AGAAGGAGAGGGAAAAGGTT+AGG | 0.456908 | 4.2:-13036357 | MS.gene08806:CDS |
| TGCCCAACCTGCTGGCCTAT+CGG | 0.458375 | 4.2:-13036083 | MS.gene08806:CDS |
| CGAGATGGGTTTCTTGGTAG+TGG | 0.459697 | 4.2:-13036808 | MS.gene08806:CDS |
| GGAGAGGGAGGAAAGGGAGA+AGG | 0.461630 | 4.2:-13036374 | MS.gene08806:CDS |
| GCGAGAATATACCGAGCAAT+TGG | 0.465079 | 4.2:+13036113 | None:intergenic |
| TTTCCCTCAACTGCCCCAAC+TGG | 0.468444 | 4.2:+13036500 | None:intergenic |
| AAGAAGAGGAAGGTTGTGAA+GGG | 0.470752 | 4.2:-13036556 | MS.gene08806:CDS |
| GAATGGATATGACTGAGTTT+GGG | 0.470781 | 4.2:-13036777 | MS.gene08806:CDS |
| GAGATTTGAGGAGAGGGAAA+AGG | 0.471046 | 4.2:-13036395 | MS.gene08806:CDS |
| CATGAAGACACTAGGGTTGA+GGG | 0.472525 | 4.2:-13035989 | MS.gene08806:CDS |
| GGTGTCTGAGTGGGAAGCTA+TGG | 0.472685 | 4.2:-13036326 | MS.gene08806:CDS |
| TTTATCCTTGGCAATGGAGT+TGG | 0.472751 | 4.2:-13037089 | MS.gene08806:CDS |
| TTGAGTATGAGGCTGAAGAT+GGG | 0.475420 | 4.2:-13036672 | MS.gene08806:CDS |
| GGAGAGTTTGCGAGCAGAGT+GGG | 0.476865 | 4.2:-13036422 | MS.gene08806:CDS |
| TAACCAGTTGGGGCAGTTGA+GGG | 0.478194 | 4.2:-13036503 | MS.gene08806:CDS |
| GGGAAAAGAGATTTGAGGAG+AGG | 0.478354 | 4.2:-13036402 | MS.gene08806:CDS |
| GTTGCACTTGTTGTTGGTGG+TGG | 0.479517 | 4.2:-13036892 | MS.gene08806:CDS |
| TGGTAGTGGTGGTGGAGGAA+TGG | 0.479826 | 4.2:-13036794 | MS.gene08806:CDS |
| TTTGAGTATGAGGCTGAAGA+TGG | 0.480668 | 4.2:-13036673 | MS.gene08806:CDS |
| GGAGAAGGAAAATGAAGATA+AGG | 0.482423 | 4.2:-13036305 | MS.gene08806:CDS |
| ATATGGGTCATTCAGGGGAT+GGG | 0.484086 | 4.2:-13036753 | MS.gene08806:CDS |
| TGAATTGCAGGAGGCTGGAA+TGG | 0.484463 | 4.2:-13036228 | MS.gene08806:CDS |
| GGTCATTCAGGGGATGGGGA+TGG | 0.485469 | 4.2:-13036748 | MS.gene08806:CDS |
| AATCAGCACCGAGCAGAAAT+GGG | 0.488690 | 4.2:-13036181 | MS.gene08806:CDS |
| ATGACTGAGTTTGGGCATAT+GGG | 0.491437 | 4.2:-13036769 | MS.gene08806:CDS |
| GGTTCATCATGTTCGCGATC+CGG | 0.491682 | 4.2:-13037115 | MS.gene08806:CDS |
| GAAGAAGAGGAAGGTTGTGA+AGG | 0.494715 | 4.2:-13036557 | MS.gene08806:CDS |
| AGTTGATTCGTGAGAGGGAA+CGG | 0.495920 | 4.2:-13036261 | MS.gene08806:CDS |
| GTTGATTCGTGAGAGGGAAC+GGG | 0.496093 | 4.2:-13036260 | MS.gene08806:CDS |
| TATGAGGCATCAGTATTTGT+TGG | 0.501879 | 4.2:-13037040 | MS.gene08806:CDS |
| GGAAAAGAGATTTGAGGAGA+GGG | 0.501904 | 4.2:-13036401 | MS.gene08806:CDS |
| AGTGAGTTTGATTGGATGGA+GGG | 0.504786 | 4.2:-13036964 | MS.gene08806:CDS |
| CGGTGGTTTATCCTTGGCAA+TGG | 0.505813 | 4.2:-13037095 | MS.gene08806:CDS |
| TCATGAAGACACTAGGGTTG+AGG | 0.507498 | 4.2:-13035990 | MS.gene08806:CDS |
| GCACTTGTCCCATTTCTGCT+CGG | 0.509836 | 4.2:+13036173 | None:intergenic |
| GGCGATCGGGGAGATCGAGA+TGG | 0.510554 | 4.2:-13036823 | MS.gene08806:CDS |
| TGAGGAGAGGGAAAAGGAGA+GGG | 0.511422 | 4.2:-13036389 | MS.gene08806:CDS |
| TTGAGCAGCGCGAGATGGAA+AGG | 0.511596 | 4.2:-13036465 | MS.gene08806:CDS |
| CTAACCAGTTGGGGCAGTTG+AGG | 0.512105 | 4.2:-13036504 | MS.gene08806:CDS |
| AATGGTTATGTGTATGAGGA+AGG | 0.513055 | 4.2:-13036604 | MS.gene08806:CDS |
| AGGAGAGGGAAAAGGTTAGG+AGG | 0.513975 | 4.2:-13036354 | MS.gene08806:CDS |
| GAATTCACATAACAAGCAAT+CGG | 0.514657 | 4.2:+13037138 | None:intergenic |
| AGTTGAGGGAAATGGAGGTT+CGG | 0.515157 | 4.2:-13036489 | MS.gene08806:CDS |
| AGATGGAAAGGGAGCGCGAG+AGG | 0.523211 | 4.2:-13036453 | MS.gene08806:CDS |
| AGGAAAATGAAGATAAGGAA+AGG | 0.524324 | 4.2:-13036300 | MS.gene08806:CDS |
| TAATGAGTTGTTAGGATTTG+GGG | 0.530909 | 4.2:-13036848 | MS.gene08806:CDS |
| GTGAAGCAGAAGATCAAGAA+AGG | 0.531659 | 4.2:-13037018 | MS.gene08806:CDS |
| TTGGGCATATGGGTCATTCA+GGG | 0.531915 | 4.2:-13036759 | MS.gene08806:CDS |
| CATATGGGTCATTCAGGGGA+TGG | 0.533007 | 4.2:-13036754 | MS.gene08806:CDS |
| TGAAGCAGAAGATCAAGAAA+GGG | 0.534144 | 4.2:-13037017 | MS.gene08806:CDS |
| AGGAGGAGTTGATTCGTGAG+AGG | 0.535605 | 4.2:-13036267 | MS.gene08806:CDS |
| GAGGAAGGTTGTGAAGGGGA+TGG | 0.536250 | 4.2:-13036551 | MS.gene08806:CDS |
| TCGGTTTGAGCAGCGCGAGA+TGG | 0.536873 | 4.2:-13036470 | MS.gene08806:CDS |
| GATCCGATAGGCCAGCAGGT+TGG | 0.537517 | 4.2:+13036080 | None:intergenic |
| GCATTGTTCATGAAGACACT+AGG | 0.537607 | 4.2:-13035997 | MS.gene08806:CDS |
| AAATGGGACAAGTGCAGACT+CGG | 0.539639 | 4.2:-13036165 | MS.gene08806:CDS |
| ATGGTTATGTGTATGAGGAA+GGG | 0.542891 | 4.2:-13036603 | MS.gene08806:CDS |
| CTACGAAGGTGCAGAATATG+AGG | 0.544743 | 4.2:-13037056 | MS.gene08806:CDS |
| ATGAGAGAAGATGCCGAGAA+TGG | 0.544829 | 4.2:-13036622 | MS.gene08806:CDS |
| GATGTTGCACTTGTTGTTGG+TGG | 0.545721 | 4.2:-13036895 | MS.gene08806:CDS |
| CGAGAATGGTTATGTGTATG+AGG | 0.549700 | 4.2:-13036608 | MS.gene08806:CDS |
| GAATTTGAAGAAGAAGAGGA+AGG | 0.550240 | 4.2:-13036566 | MS.gene08806:CDS |
| GGAGCGCGAGAGGCAGAGGA+GGG | 0.550973 | 4.2:-13036443 | MS.gene08806:CDS |
| AGAAGAGGAAGGTTGTGAAG+GGG | 0.552071 | 4.2:-13036555 | MS.gene08806:CDS |
| TAAGGAAAGGAAAAGAAGAG+AGG | 0.554492 | 4.2:-13036287 | MS.gene08806:CDS |
| TAGTGAGTTTGATTGGATGG+AGG | 0.557266 | 4.2:-13036965 | MS.gene08806:CDS |
| GGAGGCTGGAATGGAAGAAG+AGG | 0.557572 | 4.2:-13036219 | MS.gene08806:CDS |
| TTGAGGAGAGGGAAAAGGAG+AGG | 0.560102 | 4.2:-13036390 | MS.gene08806:CDS |
| GTATGATCCGATAGGCCAGC+AGG | 0.563059 | 4.2:+13036076 | None:intergenic |
| TATGAGGAAGGGGAAGTGAC+GGG | 0.564004 | 4.2:-13036592 | MS.gene08806:CDS |
| GTATGAGGAAGGGGAAGTGA+CGG | 0.565215 | 4.2:-13036593 | MS.gene08806:CDS |
| GGAGGAGTTGATTCGTGAGA+GGG | 0.566702 | 4.2:-13036266 | MS.gene08806:CDS |
| GAGTAGTGAGTTTGATTGGA+TGG | 0.566726 | 4.2:-13036968 | MS.gene08806:CDS |
| GGAGAGGGAAAAGGAGAGGG+AGG | 0.569831 | 4.2:-13036386 | MS.gene08806:CDS |
| ATGAAGACACTAGGGTTGAG+GGG | 0.570754 | 4.2:-13035988 | MS.gene08806:CDS |
| GAGGCAGAGGGTGTCTGAGT+GGG | 0.575975 | 4.2:-13036335 | MS.gene08806:CDS |
| GATGGGTTTCTTGGTAGTGG+TGG | 0.578171 | 4.2:-13036805 | MS.gene08806:CDS |
| GGAAAGGAAAAGAAGAGAGG+AGG | 0.579942 | 4.2:-13036284 | MS.gene08806:CDS |
| GGATTTGGGGACGGCGATCG+GGG | 0.579977 | 4.2:-13036835 | MS.gene08806:CDS |
| GGTGGTGGTGGTACTGAGCA+CGG | 0.580119 | 4.2:-13036877 | MS.gene08806:CDS |
| GTTCGAATTTGAAGAAGAAG+AGG | 0.584176 | 4.2:-13036570 | MS.gene08806:CDS |
| AATCTTAGCAGCCAATTGCT+CGG | 0.585356 | 4.2:-13036124 | MS.gene08806:CDS |
| TGAGCAGCGCGAGATGGAAA+GGG | 0.586120 | 4.2:-13036464 | MS.gene08806:CDS |
| TGGGCATATGGGTCATTCAG+GGG | 0.587540 | 4.2:-13036758 | MS.gene08806:CDS |
| GCGATCGGGGAGATCGAGAT+GGG | 0.587801 | 4.2:-13036822 | MS.gene08806:CDS |
| TGAGTATGAGGCTGAAGATG+GGG | 0.591979 | 4.2:-13036671 | MS.gene08806:CDS |
| AGGGGATGGAAAAGAAGATG+TGG | 0.593535 | 4.2:-13036537 | MS.gene08806:CDS |
| GTGAGTTTGATTGGATGGAG+GGG | 0.594823 | 4.2:-13036963 | MS.gene08806:CDS |
| TGCCAATGATTCCTCCAAGA+AGG | 0.595383 | 4.2:-13037266 | None:intergenic |
| CATTGTTCATGAAGACACTA+GGG | 0.596869 | 4.2:-13035996 | MS.gene08806:CDS |
| GGAAAAGGTTAGGAGGCAGA+GGG | 0.600754 | 4.2:-13036347 | MS.gene08806:CDS |
| GGGGCAGTTGAGGGAAATGG+AGG | 0.604535 | 4.2:-13036494 | MS.gene08806:CDS |
| TCTTTCCAACTCCATTGCCA+AGG | 0.610858 | 4.2:+13037084 | None:intergenic |
| TCATCATGTTCGCGATCCGG+TGG | 0.612918 | 4.2:-13037112 | MS.gene08806:CDS |
| TATGGTGAAATGGTTACCGA+TGG | 0.622176 | 4.2:-13037201 | MS.gene08806:CDS |
| TGCTCGGTATATTCTCGCAG+TGG | 0.627720 | 4.2:-13036108 | MS.gene08806:CDS |
| GGAGGCAGAGGGTGTCTGAG+TGG | 0.630414 | 4.2:-13036336 | MS.gene08806:CDS |
| TTGGAAAGATGTTTCTACGA+AGG | 0.630663 | 4.2:-13037070 | MS.gene08806:CDS |
| CATCTTCGAGAGAGAACCAT+CGG | 0.632040 | 4.2:+13037185 | None:intergenic |
| TGAGTGGGAAGCTATGGAGA+AGG | 0.634490 | 4.2:-13036320 | MS.gene08806:CDS |
| GAGTTGTTAGGATTTGGGGA+CGG | 0.639788 | 4.2:-13036844 | MS.gene08806:CDS |
| GGATGGAAAAGAAGATGTGG+AGG | 0.640165 | 4.2:-13036534 | MS.gene08806:CDS |
| AGAGTGGGAAAAGAGATTTG+AGG | 0.643952 | 4.2:-13036407 | MS.gene08806:CDS |
| TGAAGACACTAGGGTTGAGG+GGG | 0.643955 | 4.2:-13035987 | MS.gene08806:CDS |
| TAGCACTAGTATGATCCGAT+AGG | 0.648983 | 4.2:+13036068 | None:intergenic |
| CATTGCCAAGGATAAACCAC+CGG | 0.650532 | 4.2:+13037096 | None:intergenic |
| GAAGCAGAAGATCAAGAAAG+GGG | 0.662267 | 4.2:-13037016 | MS.gene08806:CDS |
| GGGAGAGTTTGCGAGCAGAG+TGG | 0.666790 | 4.2:-13036423 | MS.gene08806:CDS |
| AAGAGAGAATGAATTGCAGG+AGG | 0.671244 | 4.2:-13036237 | MS.gene08806:CDS |
| GTATGAGGCTGAAGATGGGG+AGG | 0.684362 | 4.2:-13036668 | MS.gene08806:CDS |
| TATGGATGGAGTTGATAATG+AGG | 0.685698 | 4.2:-13036710 | MS.gene08806:CDS |
| GATGGAAAAGAAGATGTGGA+GGG | 0.695627 | 4.2:-13036533 | MS.gene08806:CDS |
| GGTGGTGGTACTGAGCACGG+TGG | 0.808285 | 4.2:-13036874 | MS.gene08806:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AATAATGAGTTGTTAGGATT+TGG | - | chr4.2:13036363-13036382 | MS.gene08806:CDS | 25.0% |
| ! | ATAATGAGTTGTTAGGATTT+GGG | - | chr4.2:13036364-13036383 | MS.gene08806:CDS | 25.0% |
| ! | CAAAATTTGCATCATGTAAA+TGG | - | chr4.2:13037194-13037213 | MS.gene08806:CDS | 25.0% |
| !! | GTCTAATTTTCTTAGGTATA+AGG | - | chr4.2:13036284-13036303 | MS.gene08806:CDS | 25.0% |
| AGGAAAATGAAGATAAGGAA+AGG | - | chr4.2:13036913-13036932 | MS.gene08806:CDS | 30.0% | |
| ATAATGAGGTGATAGGTTTA+GGG | - | chr4.2:13036517-13036536 | MS.gene08806:CDS | 30.0% | |
| GAAGATCAATTCATTGTTGA+TGG | - | chr4.2:13037257-13037276 | MS.gene08806:CDS | 30.0% | |
| GAATTCACATAACAAGCAAT+CGG | + | chr4.2:13036078-13036097 | None:intergenic | 30.0% | |
| GCATCATTTGTGAAAGATAA+TGG | + | chr4.2:13037175-13037194 | None:intergenic | 30.0% | |
| TAATGAGTTGTTAGGATTTG+GGG | - | chr4.2:13036365-13036384 | MS.gene08806:CDS | 30.0% | |
| ! | CTTAGGTATAAGGAAGTTTT+TGG | - | chr4.2:13036294-13036313 | MS.gene08806:CDS | 30.0% |
| !! | CTCATTGGTCTAATTTTCTT+AGG | - | chr4.2:13036277-13036296 | MS.gene08806:CDS | 30.0% |
| !! | GATTGCTTGTTATGTGAATT+CGG | - | chr4.2:13036077-13036096 | MS.gene08806:CDS | 30.0% |
| !! | TGAATTTTAATGGGAATGGA+GGG | - | chr4.2:13036568-13036587 | MS.gene08806:CDS | 30.0% |
| AAAACCCTAATCGACAAGTA+TGG | - | chr4.2:13035994-13036013 | MS.gene08806:CDS | 35.0% | |
| AATCGACAAGTATGGTGAAA+TGG | - | chr4.2:13036002-13036021 | MS.gene08806:CDS | 35.0% | |
| AATGGTTATGTGTATGAGGA+AGG | - | chr4.2:13036609-13036628 | MS.gene08806:CDS | 35.0% | |
| ATGGTTATGTGTATGAGGAA+GGG | - | chr4.2:13036610-13036629 | MS.gene08806:CDS | 35.0% | |
| CATTGTTCATGAAGACACTA+GGG | - | chr4.2:13037217-13037236 | MS.gene08806:CDS | 35.0% | |
| CTCATACACATAACCATTCT+CGG | + | chr4.2:13036607-13036626 | None:intergenic | 35.0% | |
| GAATGGATATGACTGAGTTT+GGG | - | chr4.2:13036436-13036455 | MS.gene08806:CDS | 35.0% | |
| GAATTTGAAGAAGAAGAGGA+AGG | - | chr4.2:13036647-13036666 | MS.gene08806:CDS | 35.0% | |
| GATAATGAGGTGATAGGTTT+AGG | - | chr4.2:13036516-13036535 | MS.gene08806:CDS | 35.0% | |
| GGAGAAGGAAAATGAAGATA+AGG | - | chr4.2:13036908-13036927 | MS.gene08806:CDS | 35.0% | |
| GGTGGAAATAATGAGTTGTT+AGG | - | chr4.2:13036357-13036376 | MS.gene08806:CDS | 35.0% | |
| GTTCGAATTTGAAGAAGAAG+AGG | - | chr4.2:13036643-13036662 | MS.gene08806:CDS | 35.0% | |
| TAAGGAAAGGAAAAGAAGAG+AGG | - | chr4.2:13036926-13036945 | MS.gene08806:CDS | 35.0% | |
| TGAAGCAGAAGATCAAGAAA+GGG | - | chr4.2:13036196-13036215 | MS.gene08806:CDS | 35.0% | |
| ! | TATGAGGCATCAGTATTTGT+TGG | - | chr4.2:13036173-13036192 | MS.gene08806:CDS | 35.0% |
| ! | TTCACCATACTTGTCGATTA+GGG | + | chr4.2:13036001-13036020 | None:intergenic | 35.0% |
| ! | TTGGAAAGATGTTTCTACGA+AGG | - | chr4.2:13036143-13036162 | MS.gene08806:CDS | 35.0% |
| ! | TTTCACCATACTTGTCGATT+AGG | + | chr4.2:13036002-13036021 | None:intergenic | 35.0% |
| !! | ATGGGGAGGTGAATTTTAAT+GGG | - | chr4.2:13036559-13036578 | MS.gene08806:CDS | 35.0% |
| !! | GAGGTGAATTTTAATGGGAA+TGG | - | chr4.2:13036564-13036583 | MS.gene08806:CDS | 35.0% |
| !! | GTGAATTTTAATGGGAATGG+AGG | - | chr4.2:13036567-13036586 | MS.gene08806:CDS | 35.0% |
| !! | TATGGATGGAGTTGATAATG+AGG | - | chr4.2:13036503-13036522 | MS.gene08806:CDS | 35.0% |
| AAGAAGAGGAAGGTTGTGAA+GGG | - | chr4.2:13036657-13036676 | MS.gene08806:CDS | 40.0% | |
| AAGAGAGAATGAATTGCAGG+AGG | - | chr4.2:13036976-13036995 | MS.gene08806:CDS | 40.0% | |
| AATCTTAGCAGCCAATTGCT+CGG | - | chr4.2:13037089-13037108 | MS.gene08806:CDS | 40.0% | |
| AGAGTGGGAAAAGAGATTTG+AGG | - | chr4.2:13036806-13036825 | MS.gene08806:CDS | 40.0% | |
| AGTGAGTTTGATTGGATGGA+GGG | - | chr4.2:13036249-13036268 | MS.gene08806:CDS | 40.0% | |
| ATGACTGAGTTTGGGCATAT+GGG | - | chr4.2:13036444-13036463 | MS.gene08806:CDS | 40.0% | |
| ATGGGAGTAGTGAGTTTGAT+TGG | - | chr4.2:13036241-13036260 | MS.gene08806:CDS | 40.0% | |
| CGAGAATGGTTATGTGTATG+AGG | - | chr4.2:13036605-13036624 | MS.gene08806:CDS | 40.0% | |
| GAAGCAGAAGATCAAGAAAG+GGG | - | chr4.2:13036197-13036216 | MS.gene08806:CDS | 40.0% | |
| GAGTAGTGAGTTTGATTGGA+TGG | - | chr4.2:13036245-13036264 | MS.gene08806:CDS | 40.0% | |
| GATGGAAAAGAAGATGTGGA+GGG | - | chr4.2:13036680-13036699 | MS.gene08806:CDS | 40.0% | |
| GCATTGTTCATGAAGACACT+AGG | - | chr4.2:13037216-13037235 | MS.gene08806:CDS | 40.0% | |
| GGAAAAGAGATTTGAGGAGA+GGG | - | chr4.2:13036812-13036831 | MS.gene08806:CDS | 40.0% | |
| GGAATGGATATGACTGAGTT+TGG | - | chr4.2:13036435-13036454 | MS.gene08806:CDS | 40.0% | |
| GTGAAGCAGAAGATCAAGAA+AGG | - | chr4.2:13036195-13036214 | MS.gene08806:CDS | 40.0% | |
| TAGCACTAGTATGATCCGAT+AGG | + | chr4.2:13037148-13037167 | None:intergenic | 40.0% | |
| TAGTGAGTTTGATTGGATGG+AGG | - | chr4.2:13036248-13036267 | MS.gene08806:CDS | 40.0% | |
| TATGACTGAGTTTGGGCATA+TGG | - | chr4.2:13036443-13036462 | MS.gene08806:CDS | 40.0% | |
| TATGGTGAAATGGTTACCGA+TGG | - | chr4.2:13036012-13036031 | MS.gene08806:CDS | 40.0% | |
| TCAGTCCATTTCTTCCTTCT+TGG | + | chr4.2:13035964-13035983 | None:intergenic | 40.0% | |
| TGGTTATGTGTATGAGGAAG+GGG | - | chr4.2:13036611-13036630 | MS.gene08806:CDS | 40.0% | |
| TTCCTCCAAGAAGGAAGAAA+TGG | - | chr4.2:13035956-13035975 | MS.gene08806:CDS | 40.0% | |
| TTGAGTATGAGGCTGAAGAT+GGG | - | chr4.2:13036541-13036560 | MS.gene08806:CDS | 40.0% | |
| TTTATCCTTGGCAATGGAGT+TGG | - | chr4.2:13036124-13036143 | MS.gene08806:CDS | 40.0% | |
| TTTGAGTATGAGGCTGAAGA+TGG | - | chr4.2:13036540-13036559 | MS.gene08806:CDS | 40.0% | |
| ! | AGGGTTTTTGCTAACCAGTT+GGG | - | chr4.2:13036699-13036718 | MS.gene08806:CDS | 40.0% |
| ! | AGGTTTAGGGTTTGAGTATG+AGG | - | chr4.2:13036530-13036549 | MS.gene08806:CDS | 40.0% |
| ! | ATCAAGAAAGGGGAGTTTTC+TGG | - | chr4.2:13036207-13036226 | MS.gene08806:CDS | 40.0% |
| ! | GATGGGGAGGTGAATTTTAA+TGG | - | chr4.2:13036558-13036577 | MS.gene08806:CDS | 40.0% |
| !! | GGAGTTGATAATGAGGTGAT+AGG | - | chr4.2:13036510-13036529 | MS.gene08806:CDS | 40.0% |
| AAATGGGACAAGTGCAGACT+CGG | - | chr4.2:13037048-13037067 | MS.gene08806:CDS | 45.0% | |
| AGAAGAGGAAGGTTGTGAAG+GGG | - | chr4.2:13036658-13036677 | MS.gene08806:CDS | 45.0% | |
| AGAAGGAGAGGGAAAAGGTT+AGG | - | chr4.2:13036856-13036875 | MS.gene08806:CDS | 45.0% | |
| AGGGGATGGAAAAGAAGATG+TGG | - | chr4.2:13036676-13036695 | MS.gene08806:CDS | 45.0% | |
| AGTTGAGGGAAATGGAGGTT+CGG | - | chr4.2:13036724-13036743 | MS.gene08806:CDS | 45.0% | |
| ATATGGGTCATTCAGGGGAT+GGG | - | chr4.2:13036460-13036479 | MS.gene08806:CDS | 45.0% | |
| ATGAAGACACTAGGGTTGAG+GGG | - | chr4.2:13037225-13037244 | MS.gene08806:CDS | 45.0% | |
| ATGAGAGAAGATGCCGAGAA+TGG | - | chr4.2:13036591-13036610 | MS.gene08806:CDS | 45.0% | |
| CATCTTCGAGAGAGAACCAT+CGG | + | chr4.2:13036031-13036050 | None:intergenic | 45.0% | |
| CATGAAGACACTAGGGTTGA+GGG | - | chr4.2:13037224-13037243 | MS.gene08806:CDS | 45.0% | |
| CATTGCCAAGGATAAACCAC+CGG | + | chr4.2:13036120-13036139 | None:intergenic | 45.0% | |
| GAAGAAGAGGAAGGTTGTGA+AGG | - | chr4.2:13036656-13036675 | MS.gene08806:CDS | 45.0% | |
| GAGATTTGAGGAGAGGGAAA+AGG | - | chr4.2:13036818-13036837 | MS.gene08806:CDS | 45.0% | |
| GAGTTGTTAGGATTTGGGGA+CGG | - | chr4.2:13036369-13036388 | MS.gene08806:CDS | 45.0% | |
| GCGAGAATATACCGAGCAAT+TGG | + | chr4.2:13037103-13037122 | None:intergenic | 45.0% | |
| GGAAAGGAAAAGAAGAGAGG+AGG | - | chr4.2:13036929-13036948 | MS.gene08806:CDS | 45.0% | |
| GGATGGAAAAGAAGATGTGG+AGG | - | chr4.2:13036679-13036698 | MS.gene08806:CDS | 45.0% | |
| GGGAAAAGAGATTTGAGGAG+AGG | - | chr4.2:13036811-13036830 | MS.gene08806:CDS | 45.0% | |
| GGGAAGAGAGAATGAATTGC+AGG | - | chr4.2:13036973-13036992 | MS.gene08806:CDS | 45.0% | |
| GTCCATTTCTTCCTTCTTGG+AGG | + | chr4.2:13035961-13035980 | None:intergenic | 45.0% | |
| GTGAGTTTGATTGGATGGAG+GGG | - | chr4.2:13036250-13036269 | MS.gene08806:CDS | 45.0% | |
| TCATGAAGACACTAGGGTTG+AGG | - | chr4.2:13037223-13037242 | MS.gene08806:CDS | 45.0% | |
| TCTTTCCAACTCCATTGCCA+AGG | + | chr4.2:13036132-13036151 | None:intergenic | 45.0% | |
| TGAGTATGAGGCTGAAGATG+GGG | - | chr4.2:13036542-13036561 | MS.gene08806:CDS | 45.0% | |
| TTGGGCATATGGGTCATTCA+GGG | - | chr4.2:13036454-13036473 | MS.gene08806:CDS | 45.0% | |
| TTTGGGCATATGGGTCATTC+AGG | - | chr4.2:13036453-13036472 | MS.gene08806:CDS | 45.0% | |
| ! | AAATCAGCACCGAGCAGAAA+TGG | - | chr4.2:13037031-13037050 | MS.gene08806:CDS | 45.0% |
| ! | AAGAAAGGGGAGTTTTCTGG+TGG | - | chr4.2:13036210-13036229 | MS.gene08806:CDS | 45.0% |
| ! | AATCAGCACCGAGCAGAAAT+GGG | - | chr4.2:13037032-13037051 | MS.gene08806:CDS | 45.0% |
| ! | CTACGAAGGTGCAGAATATG+AGG | - | chr4.2:13036157-13036176 | MS.gene08806:CDS | 45.0% |
| ! | GAGGGTTTTTGCTAACCAGT+TGG | - | chr4.2:13036698-13036717 | MS.gene08806:CDS | 45.0% |
| ! | GATTTTGCGGTTGCTATGGA+TGG | - | chr4.2:13036489-13036508 | MS.gene08806:CDS | 45.0% |
| ! | GGGTTTTTGCTAACCAGTTG+GGG | - | chr4.2:13036700-13036719 | MS.gene08806:CDS | 45.0% |
| !! | AGAAAGGGGAGTTTTCTGGT+GGG | - | chr4.2:13036211-13036230 | MS.gene08806:CDS | 45.0% |
| !! | AGTTGATTCGTGAGAGGGAA+CGG | - | chr4.2:13036952-13036971 | MS.gene08806:CDS | 45.0% |
| !! | GATGTTGCACTTGTTGTTGG+TGG | - | chr4.2:13036318-13036337 | MS.gene08806:CDS | 45.0% |
| !! | GGTGATGTTGCACTTGTTGT+TGG | - | chr4.2:13036315-13036334 | MS.gene08806:CDS | 45.0% |
| AAGGGAGAAGGAGAGGGAAA+AGG | - | chr4.2:13036851-13036870 | MS.gene08806:CDS | 50.0% | |
| AGGAGAGGGAAAAGGTTAGG+AGG | - | chr4.2:13036859-13036878 | MS.gene08806:CDS | 50.0% | |
| CATATGGGTCATTCAGGGGA+TGG | - | chr4.2:13036459-13036478 | MS.gene08806:CDS | 50.0% | |
| CGGTGGTTTATCCTTGGCAA+TGG | - | chr4.2:13036118-13036137 | MS.gene08806:CDS | 50.0% | |
| GAGAATGAATTGCAGGAGGC+TGG | - | chr4.2:13036980-13036999 | MS.gene08806:CDS | 50.0% | |
| GCACTTGTCCCATTTCTGCT+CGG | + | chr4.2:13037043-13037062 | None:intergenic | 50.0% | |
| GGAAAAGGAGAGGGAGGAAA+GGG | - | chr4.2:13036833-13036852 | MS.gene08806:CDS | 50.0% | |
| GGAAAAGGTTAGGAGGCAGA+GGG | - | chr4.2:13036866-13036885 | MS.gene08806:CDS | 50.0% | |
| GGATGGAGGGGTTAACTCAT+TGG | - | chr4.2:13036262-13036281 | MS.gene08806:CDS | 50.0% | |
| GGTTCATCATGTTCGCGATC+CGG | - | chr4.2:13036098-13036117 | MS.gene08806:CDS | 50.0% | |
| GTATGAGGAAGGGGAAGTGA+CGG | - | chr4.2:13036620-13036639 | MS.gene08806:CDS | 50.0% | |
| TAACCAGTTGGGGCAGTTGA+GGG | - | chr4.2:13036710-13036729 | MS.gene08806:CDS | 50.0% | |
| TATGAGGAAGGGGAAGTGAC+GGG | - | chr4.2:13036621-13036640 | MS.gene08806:CDS | 50.0% | |
| TATGGGTCATTCAGGGGATG+GGG | - | chr4.2:13036461-13036480 | MS.gene08806:CDS | 50.0% | |
| TGAAGACACTAGGGTTGAGG+GGG | - | chr4.2:13037226-13037245 | MS.gene08806:CDS | 50.0% | |
| TGAATTGCAGGAGGCTGGAA+TGG | - | chr4.2:13036985-13037004 | MS.gene08806:CDS | 50.0% | |
| TGAGGAGAGGGAAAAGGAGA+GGG | - | chr4.2:13036824-13036843 | MS.gene08806:CDS | 50.0% | |
| TGAGTGGGAAGCTATGGAGA+AGG | - | chr4.2:13036893-13036912 | MS.gene08806:CDS | 50.0% | |
| TGCTCGGTATATTCTCGCAG+TGG | - | chr4.2:13037105-13037124 | MS.gene08806:CDS | 50.0% | |
| TGGGCATATGGGTCATTCAG+GGG | - | chr4.2:13036455-13036474 | MS.gene08806:CDS | 50.0% | |
| TTGAGGAGAGGGAAAAGGAG+AGG | - | chr4.2:13036823-13036842 | MS.gene08806:CDS | 50.0% | |
| ! | CGAGATGGGTTTCTTGGTAG+TGG | - | chr4.2:13036405-13036424 | MS.gene08806:CDS | 50.0% |
| ! | GGAGATCGAGATGGGTTTCT+TGG | - | chr4.2:13036399-13036418 | MS.gene08806:CDS | 50.0% |
| ! | TGGGGATTTTGCGGTTGCTA+TGG | - | chr4.2:13036485-13036504 | MS.gene08806:CDS | 50.0% |
| ! | TTTCTGGTGGGGAGTGTGAT+GGG | - | chr4.2:13036223-13036242 | MS.gene08806:CDS | 50.0% |
| !! | AGGAGGAGTTGATTCGTGAG+AGG | - | chr4.2:13036946-13036965 | MS.gene08806:CDS | 50.0% |
| !! | GAAAGGGGAGTTTTCTGGTG+GGG | - | chr4.2:13036212-13036231 | MS.gene08806:CDS | 50.0% |
| !! | GATGGGTTTCTTGGTAGTGG+TGG | - | chr4.2:13036408-13036427 | MS.gene08806:CDS | 50.0% |
| !! | GGAGGAGTTGATTCGTGAGA+GGG | - | chr4.2:13036947-13036966 | MS.gene08806:CDS | 50.0% |
| !! | GTTGATTCGTGAGAGGGAAC+GGG | - | chr4.2:13036953-13036972 | MS.gene08806:CDS | 50.0% |
| !! | GTTGCACTTGTTGTTGGTGG+TGG | - | chr4.2:13036321-13036340 | MS.gene08806:CDS | 50.0% |
| !! | TTTCTTGGTAGTGGTGGTGG+AGG | - | chr4.2:13036414-13036433 | MS.gene08806:CDS | 50.0% |
| !! | TTTTCTGGTGGGGAGTGTGA+TGG | - | chr4.2:13036222-13036241 | MS.gene08806:CDS | 50.0% |
| ATCCGATAGGCCAGCAGGTT+GGG | + | chr4.2:13037135-13037154 | None:intergenic | 55.0% | |
| CTAACCAGTTGGGGCAGTTG+AGG | - | chr4.2:13036709-13036728 | MS.gene08806:CDS | 55.0% | |
| GAGGAAGGTTGTGAAGGGGA+TGG | - | chr4.2:13036662-13036681 | MS.gene08806:CDS | 55.0% | |
| GCGATCCGGTGGTTTATCCT+TGG | - | chr4.2:13036112-13036131 | MS.gene08806:CDS | 55.0% | |
| GGAGAGTTTGCGAGCAGAGT+GGG | - | chr4.2:13036791-13036810 | MS.gene08806:CDS | 55.0% | |
| GGAGGAAAGGGAGAAGGAGA+GGG | - | chr4.2:13036845-13036864 | MS.gene08806:CDS | 55.0% | |
| GGAGGCTGGAATGGAAGAAG+AGG | - | chr4.2:13036994-13037013 | MS.gene08806:CDS | 55.0% | |
| GGGAAAAGGAGAGGGAGGAA+AGG | - | chr4.2:13036832-13036851 | MS.gene08806:CDS | 55.0% | |
| GGGAAAAGGTTAGGAGGCAG+AGG | - | chr4.2:13036865-13036884 | MS.gene08806:CDS | 55.0% | |
| GGTGTCTGAGTGGGAAGCTA+TGG | - | chr4.2:13036887-13036906 | MS.gene08806:CDS | 55.0% | |
| GTATGAGGCTGAAGATGGGG+AGG | - | chr4.2:13036545-13036564 | MS.gene08806:CDS | 55.0% | |
| GTATGATCCGATAGGCCAGC+AGG | + | chr4.2:13037140-13037159 | None:intergenic | 55.0% | |
| GTCATTCAGGGGATGGGGAT+GGG | - | chr4.2:13036466-13036485 | MS.gene08806:CDS | 55.0% | |
| GTTGGGGCAGTTGAGGGAAA+TGG | - | chr4.2:13036716-13036735 | MS.gene08806:CDS | 55.0% | |
| TAGGATTTGGGGACGGCGAT+CGG | - | chr4.2:13036376-13036395 | MS.gene08806:CDS | 55.0% | |
| TCATCATGTTCGCGATCCGG+TGG | - | chr4.2:13036101-13036120 | MS.gene08806:CDS | 55.0% | |
| TCATTCAGGGGATGGGGATG+GGG | - | chr4.2:13036467-13036486 | MS.gene08806:CDS | 55.0% | |
| TGAGCAGCGCGAGATGGAAA+GGG | - | chr4.2:13036749-13036768 | MS.gene08806:CDS | 55.0% | |
| TTGAGCAGCGCGAGATGGAA+AGG | - | chr4.2:13036748-13036767 | MS.gene08806:CDS | 55.0% | |
| TTTCCCTCAACTGCCCCAAC+TGG | + | chr4.2:13036716-13036735 | None:intergenic | 55.0% | |
| ! | GGATGGGGATGGGGATTTTG+CGG | - | chr4.2:13036476-13036495 | MS.gene08806:CDS | 55.0% |
| !! | GCACTTGTTGTTGGTGGTGG+TGG | - | chr4.2:13036324-13036343 | MS.gene08806:CDS | 55.0% |
| !! | GGGTTTCTTGGTAGTGGTGG+TGG | - | chr4.2:13036411-13036430 | MS.gene08806:CDS | 55.0% |
| !! | TGGTAGTGGTGGTGGAGGAA+TGG | - | chr4.2:13036419-13036438 | MS.gene08806:CDS | 55.0% |
| AGGATTTGGGGACGGCGATC+GGG | - | chr4.2:13036377-13036396 | MS.gene08806:CDS | 60.0% | |
| GATCCGATAGGCCAGCAGGT+TGG | + | chr4.2:13037136-13037155 | None:intergenic | 60.0% | |
| GCGATCGGGGAGATCGAGAT+GGG | - | chr4.2:13036391-13036410 | MS.gene08806:CDS | 60.0% | |
| GGAGAGGGAAAAGGAGAGGG+AGG | - | chr4.2:13036827-13036846 | MS.gene08806:CDS | 60.0% | |
| GGAGAGGGAGGAAAGGGAGA+AGG | - | chr4.2:13036839-13036858 | MS.gene08806:CDS | 60.0% | |
| GGGAGAGTTTGCGAGCAGAG+TGG | - | chr4.2:13036790-13036809 | MS.gene08806:CDS | 60.0% | |
| GGGAGGAAAGGGAGAAGGAG+AGG | - | chr4.2:13036844-13036863 | MS.gene08806:CDS | 60.0% | |
| GGGGCAGTTGAGGGAAATGG+AGG | - | chr4.2:13036719-13036738 | MS.gene08806:CDS | 60.0% | |
| GGTCATTCAGGGGATGGGGA+TGG | - | chr4.2:13036465-13036484 | MS.gene08806:CDS | 60.0% | |
| ! | AGATGGAAAGGGAGCGCGAG+AGG | - | chr4.2:13036760-13036779 | MS.gene08806:CDS | 60.0% |
| ! | TCGGTTTGAGCAGCGCGAGA+TGG | - | chr4.2:13036743-13036762 | MS.gene08806:CDS | 60.0% |
| ! | TGCCCAACCTGCTGGCCTAT+CGG | - | chr4.2:13037130-13037149 | MS.gene08806:CDS | 60.0% |
| !! | GAGGCAGAGGGTGTCTGAGT+GGG | - | chr4.2:13036878-13036897 | MS.gene08806:CDS | 60.0% |
| !! | GGTGGTGGTGGTACTGAGCA+CGG | - | chr4.2:13036336-13036355 | MS.gene08806:CDS | 60.0% |
| GGATTTGGGGACGGCGATCG+GGG | - | chr4.2:13036378-13036397 | MS.gene08806:CDS | 65.0% | |
| GGCGATCGGGGAGATCGAGA+TGG | - | chr4.2:13036390-13036409 | MS.gene08806:CDS | 65.0% | |
| ! | AAAGGGAGCGCGAGAGGCAG+AGG | - | chr4.2:13036766-13036785 | MS.gene08806:CDS | 65.0% |
| ! | GGTGGTGGTACTGAGCACGG+TGG | - | chr4.2:13036339-13036358 | MS.gene08806:CDS | 65.0% |
| !! | CAGTGGACTGCCCAACCTGC+TGG | - | chr4.2:13037122-13037141 | MS.gene08806:CDS | 65.0% |
| !! | GGAGGCAGAGGGTGTCTGAG+TGG | - | chr4.2:13036877-13036896 | MS.gene08806:CDS | 65.0% |
| GGAGCGCGAGAGGCAGAGGA+GGG | - | chr4.2:13036770-13036789 | MS.gene08806:CDS | 70.0% | |
| ! | GGGAGCGCGAGAGGCAGAGG+AGG | - | chr4.2:13036769-13036788 | MS.gene08806:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 13035952 | 13037283 | 13035952 | ID=MS.gene08806 |
| chr4.2 | mRNA | 13035952 | 13037283 | 13035952 | ID=MS.gene08806.t1;Parent=MS.gene08806 |
| chr4.2 | exon | 13035952 | 13037283 | 13035952 | ID=MS.gene08806.t1.exon1;Parent=MS.gene08806.t1 |
| chr4.2 | CDS | 13035952 | 13037283 | 13035952 | ID=cds.MS.gene08806.t1;Parent=MS.gene08806.t1 |
| Gene Sequence |
| Protein sequence |
