Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24330.t1 | XP_003589303.2 | 92.3 | 469 | 35 | 1 | 1 | 468 | 1 | 469 | 8.00E-222 | 779.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24330.t1 | G7I5A2 | 92.3 | 469 | 35 | 1 | 1 | 468 | 1 | 469 | 5.7e-222 | 779.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene24330 | 0.841016 | 6.14E-58 | -1.69E-46 |
| MS.gene049254 | MS.gene24330 | 0.808586 | 2.88E-50 | -1.69E-46 |
| MS.gene049350 | MS.gene24330 | 0.837581 | 4.78E-57 | -1.69E-46 |
| MS.gene049368 | MS.gene24330 | 0.805337 | 1.40E-49 | -1.69E-46 |
| MS.gene049711 | MS.gene24330 | 0.815779 | 7.76E-52 | -1.69E-46 |
| MS.gene049807 | MS.gene24330 | 0.865539 | 5.49E-65 | -1.69E-46 |
| MS.gene049821 | MS.gene24330 | 0.804219 | 2.40E-49 | -1.69E-46 |
| MS.gene049825 | MS.gene24330 | 0.801382 | 9.24E-49 | -1.69E-46 |
| MS.gene049850 | MS.gene24330 | 0.811532 | 6.68E-51 | -1.69E-46 |
| MS.gene049887 | MS.gene24330 | 0.82751 | 1.50E-54 | -1.69E-46 |
| MS.gene050551 | MS.gene24330 | 0.813514 | 2.46E-51 | -1.69E-46 |
| MS.gene050689 | MS.gene24330 | 0.832105 | 1.14E-55 | -1.69E-46 |
| MS.gene050838 | MS.gene24330 | 0.817614 | 3.01E-52 | -1.69E-46 |
| MS.gene050945 | MS.gene24330 | 0.812179 | 4.83E-51 | -1.69E-46 |
| MS.gene051003 | MS.gene24330 | 0.833864 | 4.17E-56 | -1.69E-46 |
| MS.gene051234 | MS.gene24330 | 0.847504 | 1.11E-59 | -1.69E-46 |
| MS.gene051279 | MS.gene24330 | 0.815165 | 1.06E-51 | -1.69E-46 |
| MS.gene051343 | MS.gene24330 | 0.820306 | 7.35E-53 | -1.69E-46 |
| MS.gene051363 | MS.gene24330 | 0.805319 | 1.41E-49 | -1.69E-46 |
| MS.gene051365 | MS.gene24330 | 0.804607 | 1.99E-49 | -1.69E-46 |
| MS.gene051628 | MS.gene24330 | 0.835178 | 1.95E-56 | -1.69E-46 |
| MS.gene051700 | MS.gene24330 | 0.829362 | 5.37E-55 | -1.69E-46 |
| MS.gene051719 | MS.gene24330 | 0.807106 | 5.94E-50 | -1.69E-46 |
| MS.gene051720 | MS.gene24330 | 0.809476 | 1.86E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene24330 | 0.821409 | 4.10E-53 | -1.69E-46 |
| MS.gene052072 | MS.gene24330 | 0.825713 | 4.03E-54 | -1.69E-46 |
| MS.gene052133 | MS.gene24330 | 0.808404 | 3.15E-50 | -1.69E-46 |
| MS.gene052239 | MS.gene24330 | -0.812996 | 3.20E-51 | -1.69E-46 |
| MS.gene052307 | MS.gene24330 | 0.840416 | 8.81E-58 | -1.69E-46 |
| MS.gene052335 | MS.gene24330 | 0.838689 | 2.48E-57 | -1.69E-46 |
| MS.gene052463 | MS.gene24330 | 0.825321 | 5.00E-54 | -1.69E-46 |
| MS.gene052516 | MS.gene24330 | 0.856376 | 3.36E-62 | -1.69E-46 |
| MS.gene052519 | MS.gene24330 | 0.802335 | 5.89E-49 | -1.69E-46 |
| MS.gene052582 | MS.gene24330 | 0.807835 | 4.16E-50 | -1.69E-46 |
| MS.gene052584 | MS.gene24330 | 0.809166 | 2.16E-50 | -1.69E-46 |
| MS.gene052609 | MS.gene24330 | 0.8269 | 2.10E-54 | -1.69E-46 |
| MS.gene052773 | MS.gene24330 | 0.804251 | 2.36E-49 | -1.69E-46 |
| MS.gene053079 | MS.gene24330 | 0.843569 | 1.29E-58 | -1.69E-46 |
| MS.gene053122 | MS.gene24330 | 0.845776 | 3.29E-59 | -1.69E-46 |
| MS.gene053143 | MS.gene24330 | 0.821221 | 4.53E-53 | -1.69E-46 |
| MS.gene053144 | MS.gene24330 | 0.843571 | 1.29E-58 | -1.69E-46 |
| MS.gene053226 | MS.gene24330 | 0.852969 | 3.26E-61 | -1.69E-46 |
| MS.gene053581 | MS.gene24330 | 0.81753 | 3.14E-52 | -1.69E-46 |
| MS.gene053597 | MS.gene24330 | 0.80394 | 2.74E-49 | -1.69E-46 |
| MS.gene053599 | MS.gene24330 | 0.822046 | 2.92E-53 | -1.69E-46 |
| MS.gene05364 | MS.gene24330 | 0.85866 | 7.07E-63 | -1.69E-46 |
| MS.gene054142 | MS.gene24330 | 0.805835 | 1.10E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene24330 | 0.830824 | 2.36E-55 | -1.69E-46 |
| MS.gene054651 | MS.gene24330 | 0.835775 | 1.38E-56 | -1.69E-46 |
| MS.gene055465 | MS.gene24330 | 0.832201 | 1.08E-55 | -1.69E-46 |
| MS.gene055466 | MS.gene24330 | 0.823652 | 1.23E-53 | -1.69E-46 |
| MS.gene055468 | MS.gene24330 | 0.836088 | 1.15E-56 | -1.69E-46 |
| MS.gene055469 | MS.gene24330 | 0.821063 | 4.93E-53 | -1.69E-46 |
| MS.gene055512 | MS.gene24330 | 0.824007 | 1.02E-53 | -1.69E-46 |
| MS.gene055513 | MS.gene24330 | 0.847889 | 8.69E-60 | -1.69E-46 |
| MS.gene055555 | MS.gene24330 | 0.821608 | 3.69E-53 | -1.69E-46 |
| MS.gene055580 | MS.gene24330 | -0.841485 | 4.62E-58 | -1.69E-46 |
| MS.gene055891 | MS.gene24330 | 0.806487 | 8.03E-50 | -1.69E-46 |
| MS.gene056005 | MS.gene24330 | 0.81497 | 1.17E-51 | -1.69E-46 |
| MS.gene056043 | MS.gene24330 | -0.831088 | 2.04E-55 | -1.69E-46 |
| MS.gene056308 | MS.gene24330 | 0.852405 | 4.72E-61 | -1.69E-46 |
| MS.gene056507 | MS.gene24330 | 0.80337 | 3.60E-49 | -1.69E-46 |
| MS.gene056578 | MS.gene24330 | 0.810218 | 1.29E-50 | -1.69E-46 |
| MS.gene056595 | MS.gene24330 | 0.818986 | 1.47E-52 | -1.69E-46 |
| MS.gene056699 | MS.gene24330 | 0.811901 | 5.55E-51 | -1.69E-46 |
| MS.gene05690 | MS.gene24330 | 0.818242 | 2.17E-52 | -1.69E-46 |
| MS.gene057034 | MS.gene24330 | 0.822437 | 2.37E-53 | -1.69E-46 |
| MS.gene057102 | MS.gene24330 | 0.859207 | 4.85E-63 | -1.69E-46 |
| MS.gene057208 | MS.gene24330 | 0.809085 | 2.25E-50 | -1.69E-46 |
| MS.gene057444 | MS.gene24330 | 0.819104 | 1.38E-52 | -1.69E-46 |
| MS.gene057446 | MS.gene24330 | 0.817801 | 2.73E-52 | -1.69E-46 |
| MS.gene057705 | MS.gene24330 | 0.829525 | 4.90E-55 | -1.69E-46 |
| MS.gene057915 | MS.gene24330 | 0.81653 | 5.27E-52 | -1.69E-46 |
| MS.gene058008 | MS.gene24330 | 0.831312 | 1.79E-55 | -1.69E-46 |
| MS.gene058009 | MS.gene24330 | 0.821119 | 4.78E-53 | -1.69E-46 |
| MS.gene058010 | MS.gene24330 | 0.800546 | 1.37E-48 | -1.69E-46 |
| MS.gene058149 | MS.gene24330 | 0.808561 | 2.92E-50 | -1.69E-46 |
| MS.gene058330 | MS.gene24330 | 0.808234 | 3.42E-50 | -1.69E-46 |
| MS.gene058492 | MS.gene24330 | 0.80027 | 1.56E-48 | -1.69E-46 |
| MS.gene058625 | MS.gene24330 | 0.830307 | 3.16E-55 | -1.69E-46 |
| MS.gene058668 | MS.gene24330 | 0.809739 | 1.63E-50 | -1.69E-46 |
| MS.gene058783 | MS.gene24330 | 0.804862 | 1.76E-49 | -1.69E-46 |
| MS.gene058852 | MS.gene24330 | 0.814885 | 1.23E-51 | -1.69E-46 |
| MS.gene058976 | MS.gene24330 | 0.809729 | 1.64E-50 | -1.69E-46 |
| MS.gene059146 | MS.gene24330 | 0.805721 | 1.16E-49 | -1.69E-46 |
| MS.gene059725 | MS.gene24330 | 0.802675 | 5.01E-49 | -1.69E-46 |
| MS.gene05978 | MS.gene24330 | 0.812529 | 4.05E-51 | -1.69E-46 |
| MS.gene05985 | MS.gene24330 | -0.814369 | 1.60E-51 | -1.69E-46 |
| MS.gene059965 | MS.gene24330 | 0.833187 | 6.16E-56 | -1.69E-46 |
| MS.gene060365 | MS.gene24330 | 0.823886 | 1.09E-53 | -1.69E-46 |
| MS.gene060587 | MS.gene24330 | 0.832726 | 8.02E-56 | -1.69E-46 |
| MS.gene060935 | MS.gene24330 | 0.801671 | 8.07E-49 | -1.69E-46 |
| MS.gene060937 | MS.gene24330 | 0.802278 | 6.05E-49 | -1.69E-46 |
| MS.gene061006 | MS.gene24330 | 0.814594 | 1.42E-51 | -1.69E-46 |
| MS.gene061100 | MS.gene24330 | 0.87123 | 8.01E-67 | -1.69E-46 |
| MS.gene061160 | MS.gene24330 | 0.819046 | 1.43E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24330.t1 | MTR_1g021670 | 97.660 | 470 | 8 | 2 | 1 | 468 | 1 | 469 | 0.0 | 943 |
| MS.gene24330.t1 | MTR_8g055930 | 41.528 | 301 | 160 | 5 | 174 | 459 | 161 | 460 | 9.16e-73 | 237 |
| MS.gene24330.t1 | MTR_1g096320 | 40.000 | 305 | 160 | 6 | 174 | 459 | 389 | 689 | 4.00e-67 | 228 |
| MS.gene24330.t1 | MTR_1g096320 | 40.000 | 305 | 160 | 6 | 174 | 459 | 395 | 695 | 5.71e-67 | 228 |
| MS.gene24330.t1 | MTR_4g088785 | 40.129 | 309 | 170 | 6 | 174 | 468 | 166 | 473 | 1.35e-64 | 218 |
| MS.gene24330.t1 | MTR_8g085850 | 37.075 | 294 | 180 | 3 | 173 | 462 | 149 | 441 | 1.15e-62 | 211 |
| MS.gene24330.t1 | MTR_8g085850 | 37.075 | 294 | 180 | 3 | 173 | 462 | 158 | 450 | 1.36e-62 | 211 |
| MS.gene24330.t1 | MTR_2g013690 | 39.189 | 296 | 169 | 5 | 174 | 459 | 206 | 500 | 1.43e-60 | 207 |
| MS.gene24330.t1 | MTR_8g085850 | 36.333 | 300 | 180 | 4 | 173 | 462 | 149 | 447 | 3.43e-60 | 205 |
| MS.gene24330.t1 | MTR_2g085170 | 40.656 | 305 | 153 | 9 | 174 | 459 | 227 | 522 | 7.80e-59 | 203 |
| MS.gene24330.t1 | MTR_8g055930 | 41.204 | 216 | 119 | 3 | 174 | 382 | 161 | 375 | 2.46e-51 | 179 |
| MS.gene24330.t1 | MTR_2g019450 | 32.993 | 294 | 182 | 9 | 164 | 447 | 107 | 395 | 1.37e-37 | 143 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24330.t1 | AT5G42660 | 64.831 | 472 | 148 | 4 | 1 | 466 | 1 | 460 | 0.0 | 625 |
| MS.gene24330.t1 | AT2G02910 | 42.904 | 303 | 160 | 5 | 174 | 465 | 155 | 455 | 1.57e-75 | 244 |
| MS.gene24330.t1 | AT2G02910 | 42.904 | 303 | 160 | 5 | 174 | 465 | 155 | 455 | 1.57e-75 | 244 |
| MS.gene24330.t1 | AT4G38500 | 33.557 | 447 | 252 | 10 | 23 | 462 | 38 | 446 | 5.81e-70 | 231 |
| MS.gene24330.t1 | AT1G34550 | 40.000 | 305 | 160 | 6 | 174 | 459 | 327 | 627 | 1.45e-68 | 231 |
| MS.gene24330.t1 | AT1G34550 | 40.000 | 305 | 160 | 6 | 174 | 459 | 421 | 721 | 3.92e-68 | 231 |
| MS.gene24330.t1 | AT4G09630 | 39.677 | 310 | 164 | 6 | 174 | 464 | 381 | 686 | 1.30e-66 | 226 |
| MS.gene24330.t1 | AT4G09630 | 39.677 | 310 | 164 | 6 | 174 | 464 | 396 | 701 | 1.77e-66 | 226 |
| MS.gene24330.t1 | AT1G53040 | 41.077 | 297 | 163 | 5 | 174 | 459 | 187 | 482 | 1.15e-64 | 218 |
| MS.gene24330.t1 | AT1G53040 | 41.077 | 297 | 163 | 5 | 174 | 459 | 187 | 482 | 1.15e-64 | 218 |
| MS.gene24330.t1 | AT1G53040 | 41.077 | 297 | 163 | 5 | 174 | 459 | 187 | 482 | 1.15e-64 | 218 |
| MS.gene24330.t1 | AT1G53040 | 41.017 | 295 | 162 | 5 | 174 | 457 | 187 | 480 | 1.85e-64 | 216 |
| MS.gene24330.t1 | AT1G53040 | 41.017 | 295 | 162 | 5 | 174 | 457 | 187 | 480 | 1.85e-64 | 216 |
| MS.gene24330.t1 | AT1G28240 | 39.262 | 298 | 166 | 7 | 174 | 459 | 214 | 508 | 1.83e-61 | 210 |
| MS.gene24330.t1 | AT1G53040 | 40.465 | 215 | 120 | 3 | 174 | 381 | 187 | 400 | 8.10e-45 | 162 |
| MS.gene24330.t1 | AT5G46220 | 30.345 | 290 | 188 | 7 | 153 | 432 | 97 | 382 | 4.68e-36 | 139 |
Find 98 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAAGCAAAATACTCTATT+TGG | 0.077140 | 1.1:+2703731 | MS.gene24330:CDS |
| CTAGTGGGTCCCTCCTAAAT+TGG | 0.222026 | 1.1:-2703768 | None:intergenic |
| AGAAGCTTCTTGTTAAATAC+TGG | 0.261001 | 1.1:+2701233 | MS.gene24330:CDS |
| TTCAACCTTTGATCAGAAAA+AGG | 0.262613 | 1.1:-2703399 | None:intergenic |
| CCTGTAGACAAGAGATTTAA+TGG | 0.266147 | 1.1:+2703955 | MS.gene24330:CDS |
| TATCTCTTTCCTCAAATGTT+TGG | 0.307680 | 1.1:-2702842 | None:intergenic |
| TACCGAGTTTCTTTCGTTTA+CGG | 0.350045 | 1.1:-2701195 | None:intergenic |
| GCGACTGATGCGTCTTTAAT+AGG | 0.361138 | 1.1:+2702756 | MS.gene24330:CDS |
| AGGTTTGCTATGTAGCATTC+TGG | 0.362293 | 1.1:+2703280 | MS.gene24330:intron |
| GGTCGCAGAGTTGGGGATAA+TGG | 0.363714 | 1.1:+2703336 | MS.gene24330:CDS |
| GTGGCGTGTTATTGTCGTTC+AGG | 0.366914 | 1.1:+2703371 | MS.gene24330:CDS |
| GTTGTATCTACTTGTGCATT+TGG | 0.368333 | 1.1:+2703119 | MS.gene24330:CDS |
| TAGACTCCAAGTCCCAATTT+AGG | 0.368651 | 1.1:+2703755 | MS.gene24330:CDS |
| AATTAGTGGGTCGCAGAGTT+GGG | 0.373736 | 1.1:+2703328 | MS.gene24330:CDS |
| CCATTAAATCTCTTGTCTAC+AGG | 0.375251 | 1.1:-2703955 | None:intergenic |
| ACGAGCTCCATGTTCTGATA+TGG | 0.376444 | 1.1:-2703833 | None:intergenic |
| GTTGGGGATAATGGATTTGT+TGG | 0.377221 | 1.1:+2703345 | MS.gene24330:CDS |
| TTCAACCGCCACAGAACATA+TGG | 0.378529 | 1.1:-2704376 | None:intergenic |
| GAAGAATCTAGTTTACCTAT+TGG | 0.384777 | 1.1:+2702714 | MS.gene24330:CDS |
| ACTAAAAGCGCAGGAATTAG+TGG | 0.395475 | 1.1:+2703314 | MS.gene24330:CDS |
| TCAAGCAAAATACTCTATTT+GGG | 0.399723 | 1.1:+2703732 | MS.gene24330:CDS |
| CCTACTACTCATGTTGTTGC+TGG | 0.399883 | 1.1:+2701427 | MS.gene24330:CDS |
| CTAATCTATTGATGTGCGTC+TGG | 0.401746 | 1.1:+2704308 | MS.gene24330:CDS |
| ACAGTGCGAATGGTGGGTTT+AGG | 0.412123 | 1.1:+2703054 | MS.gene24330:CDS |
| AGTTGCACTTCAACTTCCTC+TGG | 0.414058 | 1.1:-2703907 | None:intergenic |
| GAATTAGTGGGTCGCAGAGT+TGG | 0.426550 | 1.1:+2703327 | MS.gene24330:CDS |
| AAGAGATTTAATGGAAAGAA+AGG | 0.439466 | 1.1:+2703964 | MS.gene24330:CDS |
| TGTCTGCACTCGCAAGGATC+TGG | 0.451591 | 1.1:+2704426 | MS.gene24330:CDS |
| GTGTGTTGGAAGCGCTCCTT+TGG | 0.451902 | 1.1:+2703791 | MS.gene24330:CDS |
| AGGTGGTTCGCTTCACGTCT+AGG | 0.456871 | 1.1:+2704338 | MS.gene24330:CDS |
| TAGTGGGTCCCTCCTAAATT+GGG | 0.459505 | 1.1:-2703767 | None:intergenic |
| TACTGGAAACCAAACATTTG+AGG | 0.460309 | 1.1:+2702833 | MS.gene24330:CDS |
| CTGAATCAATACAGAAAAGA+TGG | 0.467593 | 1.1:+2703928 | MS.gene24330:CDS |
| GTCAGAGGCTTCACTTAAGA+AGG | 0.470559 | 1.1:+2703175 | MS.gene24330:CDS |
| GGTTTGCTATGTAGCATTCT+GGG | 0.477968 | 1.1:+2703281 | MS.gene24330:intron |
| AAACTACGACGGCACATTGT+GGG | 0.478159 | 1.1:+2703027 | MS.gene24330:CDS |
| ATGAGGCTAAGGCCGTTGTC+AGG | 0.480704 | 1.1:+2703869 | MS.gene24330:CDS |
| GTCCCTCCTAAATTGGGACT+TGG | 0.482377 | 1.1:-2703761 | None:intergenic |
| CACATCAATAGATTAGTTAG+TGG | 0.489792 | 1.1:-2704301 | None:intergenic |
| CCAGCAACAACATGAGTAGT+AGG | 0.491549 | 1.1:-2701427 | None:intergenic |
| ATAATGGATTTGTTGGAAAG+TGG | 0.493171 | 1.1:+2703352 | MS.gene24330:CDS |
| GGTGGTTCGCTTCACGTCTA+GGG | 0.510231 | 1.1:+2704339 | MS.gene24330:CDS |
| GTGAAGCCTCTGTTATCGTC+AGG | 0.511246 | 1.1:+2704269 | MS.gene24330:CDS |
| TAGTTCATCGGTTTCGTCGT+CGG | 0.511725 | 1.1:-2701149 | None:intergenic |
| TAACTAAATCAGCTTTGCAA+TGG | 0.522702 | 1.1:-2704481 | None:intergenic |
| ATATACAAGACTTTACCAAT+AGG | 0.522988 | 1.1:-2702729 | None:intergenic |
| TAAACTAGATTCTTCTTCCA+CGG | 0.523311 | 1.1:-2702706 | None:intergenic |
| GATGATCTCTATCAACCGAT+TGG | 0.532985 | 1.1:+2703149 | MS.gene24330:CDS |
| GTATCTACTTGTGCATTTGG+TGG | 0.539522 | 1.1:+2703122 | MS.gene24330:CDS |
| AGATCCTTGCGAGTGCAGAC+AGG | 0.541955 | 1.1:-2704424 | None:intergenic |
| TGTCGTTGTTGAAGCAATGT+TGG | 0.543414 | 1.1:-2701338 | None:intergenic |
| AAACTAGATTCTTCTTCCAC+GGG | 0.546495 | 1.1:-2702705 | None:intergenic |
| GACGACGAAACCGATGAACT+AGG | 0.549148 | 1.1:+2701151 | MS.gene24330:CDS |
| CAAGGATCTGGTCAATAGCA+TGG | 0.556262 | 1.1:+2704438 | MS.gene24330:CDS |
| GAGGGACCCACTAGGTGTGT+TGG | 0.558276 | 1.1:+2703777 | MS.gene24330:CDS |
| TCTACTTGTGCATTTGGTGG+CGG | 0.565708 | 1.1:+2703125 | MS.gene24330:CDS |
| GTACAGAACTTGTGCGCCAA+AGG | 0.567215 | 1.1:-2703807 | None:intergenic |
| TAGTGTCTATGATGAGGCTA+AGG | 0.569258 | 1.1:+2703858 | MS.gene24330:CDS |
| GTTCCCTGTCTGCACTCGCA+AGG | 0.571226 | 1.1:+2704420 | MS.gene24330:CDS |
| GAAGATAAAAGTTTCATGCA+AGG | 0.574340 | 1.1:+2703086 | MS.gene24330:CDS |
| ACTGATGCGTCTTTAATAGG+AGG | 0.575647 | 1.1:+2702759 | MS.gene24330:CDS |
| TTGCTTGAGGGAAAAGGCGA+TGG | 0.577341 | 1.1:-2703717 | None:intergenic |
| GAAGCCTCTGACATTCCAAT+CGG | 0.578839 | 1.1:-2703164 | None:intergenic |
| GTGCGTCTGGTTTAATGAGG+TGG | 0.582996 | 1.1:+2704321 | MS.gene24330:CDS |
| TCAACCGCCACAGAACATAT+GGG | 0.583405 | 1.1:-2704375 | None:intergenic |
| TGAAATCACACTAAAAGCGC+AGG | 0.586944 | 1.1:+2703305 | MS.gene24330:CDS |
| ATTAGTGGGTCGCAGAGTTG+GGG | 0.587159 | 1.1:+2703329 | MS.gene24330:CDS |
| ACTCCAAGTCCCAATTTAGG+AGG | 0.588616 | 1.1:+2703758 | MS.gene24330:CDS |
| CGCCGTAAACGAAAGAAACT+CGG | 0.589754 | 1.1:+2701193 | MS.gene24330:CDS |
| AAGGATCTGGTCAATAGCAT+GGG | 0.590506 | 1.1:+2704439 | MS.gene24330:CDS |
| GGTTCTACAGTGCGAATGGT+GGG | 0.594182 | 1.1:+2703048 | MS.gene24330:CDS |
| TCGTCGTCGGAGATTGAGAT+CGG | 0.596070 | 1.1:-2701136 | None:intergenic |
| ACACGAATTGGTTTAAGACC+AGG | 0.598308 | 1.1:+2701304 | MS.gene24330:CDS |
| GCGCATTCGACCTAGTTCAT+CGG | 0.599118 | 1.1:-2701161 | None:intergenic |
| GATCCTTGCGAGTGCAGACA+GGG | 0.600367 | 1.1:-2704423 | None:intergenic |
| GAAACTACGACGGCACATTG+TGG | 0.606798 | 1.1:+2703026 | MS.gene24330:CDS |
| CAATTTAGGAGGGACCCACT+AGG | 0.609024 | 1.1:+2703769 | MS.gene24330:CDS |
| CTCCAAGTCCCAATTTAGGA+GGG | 0.612198 | 1.1:+2703759 | MS.gene24330:CDS |
| GGGTTCTACAGTGCGAATGG+TGG | 0.617468 | 1.1:+2703047 | MS.gene24330:CDS |
| AGCGCTTCCAACACACCTAG+TGG | 0.619009 | 1.1:-2703784 | None:intergenic |
| GTTGAATGGTAAAATTCCCA+AGG | 0.623439 | 1.1:+2703416 | MS.gene24330:CDS |
| ATTGTCTCAATTGCGTGCAG+AGG | 0.623452 | 1.1:+2702791 | MS.gene24330:CDS |
| CTAAAAGCGCAGGAATTAGT+GGG | 0.625147 | 1.1:+2703315 | MS.gene24330:CDS |
| TCGTAGTAGTGTCTATGATG+AGG | 0.628284 | 1.1:+2703852 | MS.gene24330:CDS |
| GATGTGCGTCTGGTTTAATG+AGG | 0.632480 | 1.1:+2704318 | MS.gene24330:CDS |
| CTGATGCGTCTTTAATAGGA+GGG | 0.632733 | 1.1:+2702760 | MS.gene24330:CDS |
| TCAGCTTCCCATATGTTCTG+TGG | 0.637981 | 1.1:+2704368 | MS.gene24330:CDS |
| TGTGGGTTCTACAGTGCGAA+TGG | 0.652523 | 1.1:+2703044 | MS.gene24330:CDS |
| GCGCTTCCAACACACCTAGT+GGG | 0.655267 | 1.1:-2703783 | None:intergenic |
| GCTTCCCATATGTTCTGTGG+CGG | 0.655449 | 1.1:+2704371 | MS.gene24330:CDS |
| GTACTTGCCATATCAGAACA+TGG | 0.661039 | 1.1:+2703826 | MS.gene24330:CDS |
| TTTCATGCAAGGTTGCAAAG+TGG | 0.666633 | 1.1:+2703097 | MS.gene24330:CDS |
| TCAACCGATTGGAATGTCAG+AGG | 0.688554 | 1.1:+2703160 | MS.gene24330:CDS |
| AGATCGGTAGAGTGTTGCTG+TGG | 0.705202 | 1.1:-2701120 | None:intergenic |
| TGAGCAACTAGAGATTCCCG+TGG | 0.719886 | 1.1:+2702689 | MS.gene24330:CDS |
| ATGTTGGAAGAAGAACTACC+TGG | 0.722649 | 1.1:-2701322 | None:intergenic |
| ATGCTTCCTGACGATAACAG+AGG | 0.723941 | 1.1:-2704275 | None:intergenic |
| ATAGGTGAAAGAAACTACGA+CGG | 0.775814 | 1.1:+2703016 | MS.gene24330:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAATAAAATCAAGAAAA+AGG | - | chr1.1:2701485-2701504 | None:intergenic | 10.0% |
| !! | ATAAATAAAATCAAGAAAAA+GGG | - | chr1.1:2701484-2701503 | None:intergenic | 10.0% |
| !! | TTATTATAAGTAATATAGTT+TGG | + | chr1.1:2702977-2702996 | MS.gene24330:intron | 10.0% |
| !!! | TTTTATTTTGATAAAACTTA+AGG | + | chr1.1:2702596-2702615 | MS.gene24330:intron | 10.0% |
| !! | AATGTGAATTAAAATTAATC+TGG | - | chr1.1:2702908-2702927 | None:intergenic | 15.0% |
| !! | ATGTGAATTAAAATTAATCT+GGG | - | chr1.1:2702907-2702926 | None:intergenic | 15.0% |
| !! | GATTCAACATTATAAAATAT+TGG | - | chr1.1:2704227-2704246 | None:intergenic | 15.0% |
| !!! | ACAAGTTTTAATTTATTTAC+TGG | + | chr1.1:2702816-2702835 | MS.gene24330:CDS | 15.0% |
| !! | AAAACTATTATGAAAACTCT+AGG | + | chr1.1:2702409-2702428 | MS.gene24330:intron | 20.0% |
| !! | AAACTATTATGAAAACTCTA+GGG | + | chr1.1:2702410-2702429 | MS.gene24330:intron | 20.0% |
| !! | ATCATAAAGTGAATTCAAAT+AGG | + | chr1.1:2702512-2702531 | MS.gene24330:intron | 20.0% |
| !! | ATTTATTAGAACTTGAAGTT+AGG | + | chr1.1:2701680-2701699 | MS.gene24330:intron | 20.0% |
| !! | TTTCAATTGATATTGTTGAT+AGG | + | chr1.1:2704096-2704115 | MS.gene24330:intron | 20.0% |
| !!! | AATCAATTGTGTTTTTAGAA+AGG | + | chr1.1:2702245-2702264 | MS.gene24330:intron | 20.0% |
| !!! | ATTCAAGTTAGTTTTAACAA+TGG | - | chr1.1:2701398-2701417 | None:intergenic | 20.0% |
| !!! | TATTTTGATAAAACTTAAGG+AGG | + | chr1.1:2702599-2702618 | MS.gene24330:intron | 20.0% |
| ! | AAAATATGACAGCAAAATCT+TGG | - | chr1.1:2704079-2704098 | None:intergenic | 25.0% |
| ! | AACAAAAAAAGCTTTCTAAG+AGG | - | chr1.1:2703644-2703663 | None:intergenic | 25.0% |
| ! | AAGAGATTTAATGGAAAGAA+AGG | + | chr1.1:2703964-2703983 | MS.gene24330:CDS | 25.0% |
| ! | ATATACAAGACTTTACCAAT+AGG | - | chr1.1:2702732-2702751 | None:intergenic | 25.0% |
| ! | ATGATTCAAATATCAGCAAA+TGG | - | chr1.1:2703577-2703596 | None:intergenic | 25.0% |
| ! | TATATGTTTGATTGCACTAT+TGG | - | chr1.1:2701641-2701660 | None:intergenic | 25.0% |
| ! | TATCAGCAAATGGAAAAATT+AGG | - | chr1.1:2703567-2703586 | None:intergenic | 25.0% |
| ! | TATTTGCCAAATCTATTTAG+TGG | + | chr1.1:2703252-2703271 | MS.gene24330:intron | 25.0% |
| ! | TCAAGCAAAATACTCTATTT+GGG | + | chr1.1:2703732-2703751 | MS.gene24330:CDS | 25.0% |
| ! | TTCTAATTCAAGCTGAAAAT+TGG | - | chr1.1:2702174-2702193 | None:intergenic | 25.0% |
| ! | TTGATAAAAAGTTGAATCAG+TGG | - | chr1.1:2704191-2704210 | None:intergenic | 25.0% |
| !! | AAAATCAAGAAAAAGGGTTT+TGG | - | chr1.1:2701478-2701497 | None:intergenic | 25.0% |
| !!! | AAATAGAGTATTTTGCTTGA+GGG | - | chr1.1:2703732-2703751 | None:intergenic | 25.0% |
| !!! | GTTTTCCATTTAGTTTTTGT+AGG | - | chr1.1:2702394-2702413 | None:intergenic | 25.0% |
| AAATCTATTTAGTGGTATGC+AGG | + | chr1.1:2703260-2703279 | MS.gene24330:intron | 30.0% | |
| AAGCAAATTAACCAAGTGTA+TGG | - | chr1.1:2702073-2702092 | None:intergenic | 30.0% | |
| ACATGTGAGTTAATTCTATC+AGG | + | chr1.1:2702636-2702655 | MS.gene24330:intron | 30.0% | |
| AGAAGCTTCTTGTTAAATAC+TGG | + | chr1.1:2701233-2701252 | MS.gene24330:CDS | 30.0% | |
| AGCAAATTAACCAAGTGTAT+GGG | - | chr1.1:2702072-2702091 | None:intergenic | 30.0% | |
| AGTTCTTTCATTTCACTTCT+AGG | + | chr1.1:2702555-2702574 | MS.gene24330:intron | 30.0% | |
| ATGAAGTATAGAAAGAGAAG+CGG | - | chr1.1:2703459-2703478 | None:intergenic | 30.0% | |
| CATCAAAGATGTAATACCTT+GGG | - | chr1.1:2703435-2703454 | None:intergenic | 30.0% | |
| CTCAAGCAAAATACTCTATT+TGG | + | chr1.1:2703731-2703750 | MS.gene24330:CDS | 30.0% | |
| CTGAATCAATACAGAAAAGA+TGG | + | chr1.1:2703928-2703947 | MS.gene24330:CDS | 30.0% | |
| CTTAGAAATCAGTCAAATCA+CGG | + | chr1.1:2701958-2701977 | MS.gene24330:intron | 30.0% | |
| GAAGATAAAAGTTTCATGCA+AGG | + | chr1.1:2703086-2703105 | MS.gene24330:CDS | 30.0% | |
| GAAGTCCTACAAAAACTAAA+TGG | + | chr1.1:2702386-2702405 | MS.gene24330:intron | 30.0% | |
| GAAGTGAAATGAAAGAACTA+AGG | - | chr1.1:2702554-2702573 | None:intergenic | 30.0% | |
| GGTTTCTTTCTTCATTGTAT+AGG | + | chr1.1:2702998-2703017 | MS.gene24330:intron | 30.0% | |
| TAAACTAGATTCTTCTTCCA+CGG | - | chr1.1:2702709-2702728 | None:intergenic | 30.0% | |
| TATCTCTTTCCTCAAATGTT+TGG | - | chr1.1:2702845-2702864 | None:intergenic | 30.0% | |
| TCTACAAACAACAACAATCA+AGG | - | chr1.1:2702475-2702494 | None:intergenic | 30.0% | |
| TGCAAGTAAAAATAAACGTC+CGG | + | chr1.1:2702137-2702156 | MS.gene24330:intron | 30.0% | |
| TGCATACCACTAAATAGATT+TGG | - | chr1.1:2703261-2703280 | None:intergenic | 30.0% | |
| TTCAACCTTTGATCAGAAAA+AGG | - | chr1.1:2703402-2703421 | None:intergenic | 30.0% | |
| TTTGATAAAACTTAAGGAGG+CGG | + | chr1.1:2702602-2702621 | MS.gene24330:intron | 30.0% | |
| ! | AAGCTCAAAATAGTGGTTTT+AGG | - | chr1.1:2701938-2701957 | None:intergenic | 30.0% |
| ! | ATCTTCCTTTTTCTGATCAA+AGG | + | chr1.1:2703394-2703413 | MS.gene24330:CDS | 30.0% |
| ! | CACATCAATAGATTAGTTAG+TGG | - | chr1.1:2704304-2704323 | None:intergenic | 30.0% |
| ! | GAAGAATCTAGTTTACCTAT+TGG | + | chr1.1:2702714-2702733 | MS.gene24330:CDS | 30.0% |
| ! | GACATGTAGATTTTGTAGTA+AGG | + | chr1.1:2702320-2702339 | MS.gene24330:intron | 30.0% |
| ! | TTCTAAGAAGCTCAAAATAG+TGG | - | chr1.1:2701945-2701964 | None:intergenic | 30.0% |
| ! | TTTTACGAGATTACACGAAT+TGG | + | chr1.1:2701292-2701311 | MS.gene24330:CDS | 30.0% |
| ! | TTTTCTGATCAAAGGTTGAA+TGG | + | chr1.1:2703402-2703421 | MS.gene24330:CDS | 30.0% |
| !! | AAAGTTAGTTGATTTGCTTG+CGG | + | chr1.1:2701536-2701555 | MS.gene24330:intron | 30.0% |
| !! | ATAATGGATTTGTTGGAAAG+TGG | + | chr1.1:2703352-2703371 | MS.gene24330:CDS | 30.0% |
| !! | CAAATAGAGTATTTTGCTTG+AGG | - | chr1.1:2703733-2703752 | None:intergenic | 30.0% |
| !! | GTTTTTAGAAAGGCTTTTGT+CGG | + | chr1.1:2702255-2702274 | MS.gene24330:intron | 30.0% |
| !!! | AAGAAAAAGGGTTTTGGATT+GGG | - | chr1.1:2701472-2701491 | None:intergenic | 30.0% |
| AAACTAGATTCTTCTTCCAC+GGG | - | chr1.1:2702708-2702727 | None:intergenic | 35.0% | |
| AAATCACGGTAATTGAGCAT+TGG | + | chr1.1:2701972-2701991 | MS.gene24330:intron | 35.0% | |
| AACAGACTAGATGAGAAGAT+TGG | - | chr1.1:2704153-2704172 | None:intergenic | 35.0% | |
| AATCACGGTAATTGAGCATT+GGG | + | chr1.1:2701973-2701992 | MS.gene24330:intron | 35.0% | |
| AGTAAGGAGAGTAAATCAGA+TGG | + | chr1.1:2702336-2702355 | MS.gene24330:intron | 35.0% | |
| ATAGGTGAAAGAAACTACGA+CGG | + | chr1.1:2703016-2703035 | MS.gene24330:intron | 35.0% | |
| ATGCATTGAGAAGTGACAAT+GGG | - | chr1.1:2701811-2701830 | None:intergenic | 35.0% | |
| CCATTAAATCTCTTGTCTAC+AGG | - | chr1.1:2703958-2703977 | None:intergenic | 35.0% | |
| CCTGTAGACAAGAGATTTAA+TGG | + | chr1.1:2703955-2703974 | MS.gene24330:CDS | 35.0% | |
| GCATCAAAGATGTAATACCT+TGG | - | chr1.1:2703436-2703455 | None:intergenic | 35.0% | |
| GTTGAATGGTAAAATTCCCA+AGG | + | chr1.1:2703416-2703435 | MS.gene24330:CDS | 35.0% | |
| GTTGTATCTACTTGTGCATT+TGG | + | chr1.1:2703119-2703138 | MS.gene24330:CDS | 35.0% | |
| TAAAAGAGTAAAAACGCAGC+TGG | - | chr1.1:2701277-2701296 | None:intergenic | 35.0% | |
| TACCGAGTTTCTTTCGTTTA+CGG | - | chr1.1:2701198-2701217 | None:intergenic | 35.0% | |
| TACTGGAAACCAAACATTTG+AGG | + | chr1.1:2702833-2702852 | MS.gene24330:CDS | 35.0% | |
| TCATTGTTAACCCATACACT+TGG | + | chr1.1:2702059-2702078 | MS.gene24330:intron | 35.0% | |
| TGAAGTATAGAAAGAGAAGC+GGG | - | chr1.1:2703458-2703477 | None:intergenic | 35.0% | |
| ! | ACTAGAATTGATTCTTGACG+CGG | - | chr1.1:2701609-2701628 | None:intergenic | 35.0% |
| ! | ACTCTAGGGATTAATGAGTT+TGG | + | chr1.1:2702424-2702443 | MS.gene24330:intron | 35.0% |
| ! | AGTATTTTGCTTGAGGGAAA+AGG | - | chr1.1:2703726-2703745 | None:intergenic | 35.0% |
| ! | CTCCATAAAAGTGAGTTGAA+AGG | - | chr1.1:2701757-2701776 | None:intergenic | 35.0% |
| ! | GGAAAGAGATAGAAGTTTTG+AGG | + | chr1.1:2702854-2702873 | MS.gene24330:CDS | 35.0% |
| ! | GGAATCTTGTGAGAACATTT+TGG | - | chr1.1:2703546-2703565 | None:intergenic | 35.0% |
| ! | TCTAGTTGCTCAAGTTTTTC+AGG | - | chr1.1:2702681-2702700 | None:intergenic | 35.0% |
| !! | AAAATTGGAGCTTTAGACTC+CGG | - | chr1.1:2702159-2702178 | None:intergenic | 35.0% |
| !! | ACAAACAGAGCATTGAATCA+CGG | - | chr1.1:2701881-2701900 | None:intergenic | 35.0% |
| !! | ACACTTGGTTAATTTGCTTG+CGG | + | chr1.1:2702074-2702093 | MS.gene24330:intron | 35.0% |
| !! | CTTGTGAGAACATTTTGGTA+GGG | - | chr1.1:2703541-2703560 | None:intergenic | 35.0% |
| !! | TCTTGTGAGAACATTTTGGT+AGG | - | chr1.1:2703542-2703561 | None:intergenic | 35.0% |
| !! | TGCCTTTCAACTCACTTTTA+TGG | + | chr1.1:2701752-2701771 | MS.gene24330:intron | 35.0% |
| !! | TTTGCAATGGTTTTGCTTTG+CGG | - | chr1.1:2704471-2704490 | None:intergenic | 35.0% |
| !!! | AGAAAAAGGGTTTTGGATTG+GGG | - | chr1.1:2701471-2701490 | None:intergenic | 35.0% |
| !!! | CAAGAAAAAGGGTTTTGGAT+TGG | - | chr1.1:2701473-2701492 | None:intergenic | 35.0% |
| !!! | GATAGAAGTTTTGAGGTGAT+TGG | + | chr1.1:2702861-2702880 | MS.gene24330:intron | 35.0% |
| AAGGAGAGTAAATCAGATGG+AGG | + | chr1.1:2702339-2702358 | MS.gene24330:intron | 40.0% | |
| AAGGATCTGGTCAATAGCAT+GGG | + | chr1.1:2704439-2704458 | MS.gene24330:CDS | 40.0% | |
| ACTGATGCGTCTTTAATAGG+AGG | + | chr1.1:2702759-2702778 | MS.gene24330:CDS | 40.0% | |
| AGATGCGTGTATGTTTGGAT+TGG | + | chr1.1:2701775-2701794 | MS.gene24330:intron | 40.0% | |
| AGGAGAGTAAATCAGATGGA+GGG | + | chr1.1:2702340-2702359 | MS.gene24330:intron | 40.0% | |
| AGTTAAATCACTAGAGGCAG+AGG | + | chr1.1:2702364-2702383 | MS.gene24330:intron | 40.0% | |
| ATGTTGGAAGAAGAACTACC+TGG | - | chr1.1:2701325-2701344 | None:intergenic | 40.0% | |
| CATGCATTGAGAAGTGACAA+TGG | - | chr1.1:2701812-2701831 | None:intergenic | 40.0% | |
| CTAATCTATTGATGTGCGTC+TGG | + | chr1.1:2704308-2704327 | MS.gene24330:CDS | 40.0% | |
| CTCCTTACCACAAAACATAC+AGG | - | chr1.1:2702296-2702315 | None:intergenic | 40.0% | |
| CTGATGCGTCTTTAATAGGA+GGG | + | chr1.1:2702760-2702779 | MS.gene24330:CDS | 40.0% | |
| GACATGTTTGAATGCTTTCG+TGG | - | chr1.1:2702223-2702242 | None:intergenic | 40.0% | |
| GAGGGTAGTTAAATCACTAG+AGG | + | chr1.1:2702358-2702377 | MS.gene24330:intron | 40.0% | |
| GATGATCTCTATCAACCGAT+TGG | + | chr1.1:2703149-2703168 | MS.gene24330:CDS | 40.0% | |
| GTACTTGCCATATCAGAACA+TGG | + | chr1.1:2703826-2703845 | MS.gene24330:CDS | 40.0% | |
| GTATCTACTTGTGCATTTGG+TGG | + | chr1.1:2703122-2703141 | MS.gene24330:CDS | 40.0% | |
| GTTGTCTTCATTAACCCCAT+GGG | + | chr1.1:2703610-2703629 | MS.gene24330:intron | 40.0% | |
| TAGACTCCAAGTCCCAATTT+AGG | + | chr1.1:2703755-2703774 | MS.gene24330:CDS | 40.0% | |
| TAGTGTCTATGATGAGGCTA+AGG | + | chr1.1:2703858-2703877 | MS.gene24330:CDS | 40.0% | |
| TATGGAGATGCGTGTATGTT+TGG | + | chr1.1:2701770-2701789 | MS.gene24330:intron | 40.0% | |
| TCGTAGTAGTGTCTATGATG+AGG | + | chr1.1:2703852-2703871 | MS.gene24330:CDS | 40.0% | |
| TGTCGTTGTTGAAGCAATGT+TGG | - | chr1.1:2701341-2701360 | None:intergenic | 40.0% | |
| TGTTGTCTTCATTAACCCCA+TGG | + | chr1.1:2703609-2703628 | MS.gene24330:intron | 40.0% | |
| TTGTCTTCATTAACCCCATG+GGG | + | chr1.1:2703611-2703630 | MS.gene24330:intron | 40.0% | |
| TTTCATGCAAGGTTGCAAAG+TGG | + | chr1.1:2703097-2703116 | MS.gene24330:CDS | 40.0% | |
| ! | ACACGAATTGGTTTAAGACC+AGG | + | chr1.1:2701304-2701323 | MS.gene24330:CDS | 40.0% |
| ! | ACTAAAAGCGCAGGAATTAG+TGG | + | chr1.1:2703314-2703333 | MS.gene24330:CDS | 40.0% |
| ! | CTAAAAGCGCAGGAATTAGT+GGG | + | chr1.1:2703315-2703334 | MS.gene24330:CDS | 40.0% |
| ! | GACCTGTATGTTTTGTGGTA+AGG | + | chr1.1:2702291-2702310 | MS.gene24330:intron | 40.0% |
| ! | GAGAAGACCTGTATGTTTTG+TGG | + | chr1.1:2702286-2702305 | MS.gene24330:intron | 40.0% |
| ! | TGAAATCACACTAAAAGCGC+AGG | + | chr1.1:2703305-2703324 | MS.gene24330:CDS | 40.0% |
| ! | TGTCACTTCTCAATGCATGT+GGG | + | chr1.1:2701813-2701832 | MS.gene24330:intron | 40.0% |
| ! | TTCACTTCTAGGAATGAGTG+AGG | + | chr1.1:2702566-2702585 | MS.gene24330:intron | 40.0% |
| ! | TTGTCACTTCTCAATGCATG+TGG | + | chr1.1:2701812-2701831 | MS.gene24330:intron | 40.0% |
| !! | AGGTTTGCTATGTAGCATTC+TGG | + | chr1.1:2703280-2703299 | MS.gene24330:intron | 40.0% |
| !! | CAATGCTCTGTTTGTTTCTG+CGG | + | chr1.1:2701886-2701905 | MS.gene24330:intron | 40.0% |
| !! | CACTTGGTTAATTTGCTTGC+GGG | + | chr1.1:2702075-2702094 | MS.gene24330:intron | 40.0% |
| !! | GGTTTGCTATGTAGCATTCT+GGG | + | chr1.1:2703281-2703300 | MS.gene24330:intron | 40.0% |
| !! | GTTGGGGATAATGGATTTGT+TGG | + | chr1.1:2703345-2703364 | MS.gene24330:CDS | 40.0% |
| !!! | AGTTGCTCAAGTTTTTCAGG+TGG | - | chr1.1:2702678-2702697 | None:intergenic | 40.0% |
| !!! | CGCTTTGTTTTTCCTGACAA+CGG | - | chr1.1:2703884-2703903 | None:intergenic | 40.0% |
| !!! | GAAAAAGGGTTTTGGATTGG+GGG | - | chr1.1:2701470-2701489 | None:intergenic | 40.0% |
| !!! | TTCCTTTTTCAACCACGTGT+GGG | + | chr1.1:2703670-2703689 | MS.gene24330:intron | 40.0% |
| !!! | TTTCCTTTTTCAACCACGTG+TGG | + | chr1.1:2703669-2703688 | MS.gene24330:intron | 40.0% |
| AAACTACGACGGCACATTGT+GGG | + | chr1.1:2703027-2703046 | MS.gene24330:CDS | 45.0% | |
| AAGTGACAATGGGTGATCCA+TGG | - | chr1.1:2701801-2701820 | None:intergenic | 45.0% | |
| ACAACCAAGCGTATCCAGTA+GGG | - | chr1.1:2702948-2702967 | None:intergenic | 45.0% | |
| ACCAAACCAAACAGCCACTT+CGG | + | chr1.1:2702018-2702037 | MS.gene24330:intron | 45.0% | |
| ACGAGCTCCATGTTCTGATA+TGG | - | chr1.1:2703836-2703855 | None:intergenic | 45.0% | |
| ACTCCAAGTCCCAATTTAGG+AGG | + | chr1.1:2703758-2703777 | MS.gene24330:CDS | 45.0% | |
| AGTTGCACTTCAACTTCCTC+TGG | - | chr1.1:2703910-2703929 | None:intergenic | 45.0% | |
| ATGCTTCCTGACGATAACAG+AGG | - | chr1.1:2704278-2704297 | None:intergenic | 45.0% | |
| ATTGTCTCAATTGCGTGCAG+AGG | + | chr1.1:2702791-2702810 | MS.gene24330:CDS | 45.0% | |
| CAAGGATCTGGTCAATAGCA+TGG | + | chr1.1:2704438-2704457 | MS.gene24330:CDS | 45.0% | |
| CCAGCAACAACATGAGTAGT+AGG | - | chr1.1:2701430-2701449 | None:intergenic | 45.0% | |
| CCTACTACTCATGTTGTTGC+TGG | + | chr1.1:2701427-2701446 | MS.gene24330:CDS | 45.0% | |
| CGCCGTAAACGAAAGAAACT+CGG | + | chr1.1:2701193-2701212 | MS.gene24330:CDS | 45.0% | |
| CTCCAAGTCCCAATTTAGGA+GGG | + | chr1.1:2703759-2703778 | MS.gene24330:CDS | 45.0% | |
| GAAAAACAAAGCGAAGCCAG+AGG | + | chr1.1:2703891-2703910 | MS.gene24330:CDS | 45.0% | |
| GAAGCCTCTGACATTCCAAT+CGG | - | chr1.1:2703167-2703186 | None:intergenic | 45.0% | |
| GCGACTGATGCGTCTTTAAT+AGG | + | chr1.1:2702756-2702775 | MS.gene24330:CDS | 45.0% | |
| GTCAGAGGCTTCACTTAAGA+AGG | + | chr1.1:2703175-2703194 | MS.gene24330:CDS | 45.0% | |
| TACAACCAAGCGTATCCAGT+AGG | - | chr1.1:2702949-2702968 | None:intergenic | 45.0% | |
| TCAACCGATTGGAATGTCAG+AGG | + | chr1.1:2703160-2703179 | MS.gene24330:CDS | 45.0% | |
| TCAACCGCCACAGAACATAT+GGG | - | chr1.1:2704378-2704397 | None:intergenic | 45.0% | |
| TCAGCTTCCCATATGTTCTG+TGG | + | chr1.1:2704368-2704387 | MS.gene24330:CDS | 45.0% | |
| TGTCTTCATTAACCCCATGG+GGG | + | chr1.1:2703612-2703631 | MS.gene24330:intron | 45.0% | |
| TGTGTGTGTGTGTGTGTGTT+TGG | + | chr1.1:2701578-2701597 | MS.gene24330:intron | 45.0% | |
| TTCAACCGCCACAGAACATA+TGG | - | chr1.1:2704379-2704398 | None:intergenic | 45.0% | |
| ! | AATTAGTGGGTCGCAGAGTT+GGG | + | chr1.1:2703328-2703347 | MS.gene24330:CDS | 45.0% |
| ! | GATGTGCGTCTGGTTTAATG+AGG | + | chr1.1:2704318-2704337 | MS.gene24330:CDS | 45.0% |
| ! | TAGTGGGTCCCTCCTAAATT+GGG | - | chr1.1:2703770-2703789 | None:intergenic | 45.0% |
| ! | TCTACTTGTGCATTTGGTGG+CGG | + | chr1.1:2703125-2703144 | MS.gene24330:CDS | 45.0% |
| !! | GTGTATGTTTGGATTGGCCA+TGG | + | chr1.1:2701781-2701800 | MS.gene24330:intron | 45.0% |
| !! | TAAGAGGAAAGTACCCCCAT+GGG | - | chr1.1:2703628-2703647 | None:intergenic | 45.0% |
| !! | TAGTTCATCGGTTTCGTCGT+CGG | - | chr1.1:2701152-2701171 | None:intergenic | 45.0% |
| !!! | TGCTACTTGTTTTGCCCTAC+TGG | + | chr1.1:2702931-2702950 | MS.gene24330:intron | 45.0% |
| AAGATATCCAAGCCCACACG+TGG | - | chr1.1:2703685-2703704 | None:intergenic | 50.0% | |
| AGCCCACACGTGGTTGAAAA+AGG | - | chr1.1:2703675-2703694 | None:intergenic | 50.0% | |
| CAATTTAGGAGGGACCCACT+AGG | + | chr1.1:2703769-2703788 | MS.gene24330:CDS | 50.0% | |
| CCAAACCAAACAGCCACTTC+GGG | + | chr1.1:2702019-2702038 | MS.gene24330:intron | 50.0% | |
| GAAACTACGACGGCACATTG+TGG | + | chr1.1:2703026-2703045 | MS.gene24330:CDS | 50.0% | |
| GACAGAATTGCATCCCGAAG+TGG | - | chr1.1:2702035-2702054 | None:intergenic | 50.0% | |
| GACGACGAAACCGATGAACT+AGG | + | chr1.1:2701151-2701170 | MS.gene24330:CDS | 50.0% | |
| GCGCATTCGACCTAGTTCAT+CGG | - | chr1.1:2701164-2701183 | None:intergenic | 50.0% | |
| GCTTCCCATATGTTCTGTGG+CGG | + | chr1.1:2704371-2704390 | MS.gene24330:CDS | 50.0% | |
| GGTTCTACAGTGCGAATGGT+GGG | + | chr1.1:2703048-2703067 | MS.gene24330:CDS | 50.0% | |
| GTACAGAACTTGTGCGCCAA+AGG | - | chr1.1:2703810-2703829 | None:intergenic | 50.0% | |
| GTCCCTCCTAAATTGGGACT+TGG | - | chr1.1:2703764-2703783 | None:intergenic | 50.0% | |
| GTGAAGCCTCTGTTATCGTC+AGG | + | chr1.1:2704269-2704288 | MS.gene24330:CDS | 50.0% | |
| TCGTCGTCGGAGATTGAGAT+CGG | - | chr1.1:2701139-2701158 | None:intergenic | 50.0% | |
| TGAGCAACTAGAGATTCCCG+TGG | + | chr1.1:2702689-2702708 | MS.gene24330:CDS | 50.0% | |
| TGTGGGTTCTACAGTGCGAA+TGG | + | chr1.1:2703044-2703063 | MS.gene24330:CDS | 50.0% | |
| TTGCTTGAGGGAAAAGGCGA+TGG | - | chr1.1:2703720-2703739 | None:intergenic | 50.0% | |
| TTTGCCCTACTGGATACGCT+TGG | + | chr1.1:2702941-2702960 | MS.gene24330:intron | 50.0% | |
| ! | ATTAGTGGGTCGCAGAGTTG+GGG | + | chr1.1:2703329-2703348 | MS.gene24330:CDS | 50.0% |
| ! | CTAGTGGGTCCCTCCTAAAT+TGG | - | chr1.1:2703771-2703790 | None:intergenic | 50.0% |
| ! | GAATTAGTGGGTCGCAGAGT+TGG | + | chr1.1:2703327-2703346 | MS.gene24330:CDS | 50.0% |
| ! | GTGCGTCTGGTTTAATGAGG+TGG | + | chr1.1:2704321-2704340 | MS.gene24330:CDS | 50.0% |
| ! | GTGGCGTGTTATTGTCGTTC+AGG | + | chr1.1:2703371-2703390 | MS.gene24330:CDS | 50.0% |
| ! | TTTTCAACCACGTGTGGGCT+TGG | + | chr1.1:2703675-2703694 | MS.gene24330:intron | 50.0% |
| !! | AAGAGGAAAGTACCCCCATG+GGG | - | chr1.1:2703627-2703646 | None:intergenic | 50.0% |
| !! | ACAGTGCGAATGGTGGGTTT+AGG | + | chr1.1:2703054-2703073 | MS.gene24330:CDS | 50.0% |
| !! | AGATCGGTAGAGTGTTGCTG+TGG | - | chr1.1:2701123-2701142 | None:intergenic | 50.0% |
| !! | CTAAGAGGAAAGTACCCCCA+TGG | - | chr1.1:2703629-2703648 | None:intergenic | 50.0% |
| !! | GAAGTGGCTGTTTGGTTTGG+TGG | - | chr1.1:2702019-2702038 | None:intergenic | 50.0% |
| !! | TGGCTGTTTGGTTTGGTGGT+GGG | - | chr1.1:2702015-2702034 | None:intergenic | 50.0% |
| AGATCCTTGCGAGTGCAGAC+AGG | - | chr1.1:2704427-2704446 | None:intergenic | 55.0% | |
| AGCGCTTCCAACACACCTAG+TGG | - | chr1.1:2703787-2703806 | None:intergenic | 55.0% | |
| AGGTGGTTCGCTTCACGTCT+AGG | + | chr1.1:2704338-2704357 | MS.gene24330:CDS | 55.0% | |
| ATGAGGCTAAGGCCGTTGTC+AGG | + | chr1.1:2703869-2703888 | MS.gene24330:CDS | 55.0% | |
| CCCGAAGTGGCTGTTTGGTT+TGG | - | chr1.1:2702022-2702041 | None:intergenic | 55.0% | |
| GATCCTTGCGAGTGCAGACA+GGG | - | chr1.1:2704426-2704445 | None:intergenic | 55.0% | |
| GCAGAATGTGCGTCTGTGCT+TGG | - | chr1.1:2701916-2701935 | None:intergenic | 55.0% | |
| GCGCTTCCAACACACCTAGT+GGG | - | chr1.1:2703786-2703805 | None:intergenic | 55.0% | |
| GGGTTCTACAGTGCGAATGG+TGG | + | chr1.1:2703047-2703066 | MS.gene24330:CDS | 55.0% | |
| GGTCGCAGAGTTGGGGATAA+TGG | + | chr1.1:2703336-2703355 | MS.gene24330:CDS | 55.0% | |
| GGTGGTTCGCTTCACGTCTA+GGG | + | chr1.1:2704339-2704358 | MS.gene24330:CDS | 55.0% | |
| TGCATCCCGAAGTGGCTGTT+TGG | - | chr1.1:2702027-2702046 | None:intergenic | 55.0% | |
| TGTCTGCACTCGCAAGGATC+TGG | + | chr1.1:2704426-2704445 | MS.gene24330:CDS | 55.0% | |
| !! | GTGGCTGTTTGGTTTGGTGG+TGG | - | chr1.1:2702016-2702035 | None:intergenic | 55.0% |
| !! | GTGTGTTGGAAGCGCTCCTT+TGG | + | chr1.1:2703791-2703810 | MS.gene24330:CDS | 55.0% |
| GAGGGACCCACTAGGTGTGT+TGG | + | chr1.1:2703777-2703796 | MS.gene24330:CDS | 60.0% | |
| GTTCCCTGTCTGCACTCGCA+AGG | + | chr1.1:2704420-2704439 | MS.gene24330:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 2701115 | 2704495 | 2701115 | ID=MS.gene24330 |
| chr1.1 | mRNA | 2701115 | 2704495 | 2701115 | ID=MS.gene24330.t1;Parent=MS.gene24330 |
| chr1.1 | exon | 2701115 | 2701460 | 2701115 | ID=MS.gene24330.t1.exon1;Parent=MS.gene24330.t1 |
| chr1.1 | CDS | 2701115 | 2701460 | 2701115 | ID=cds.MS.gene24330.t1;Parent=MS.gene24330.t1 |
| chr1.1 | exon | 2702658 | 2702875 | 2702658 | ID=MS.gene24330.t1.exon2;Parent=MS.gene24330.t1 |
| chr1.1 | CDS | 2702658 | 2702875 | 2702658 | ID=cds.MS.gene24330.t1;Parent=MS.gene24330.t1 |
| chr1.1 | exon | 2703020 | 2703196 | 2703020 | ID=MS.gene24330.t1.exon3;Parent=MS.gene24330.t1 |
| chr1.1 | CDS | 2703020 | 2703196 | 2703020 | ID=cds.MS.gene24330.t1;Parent=MS.gene24330.t1 |
| chr1.1 | exon | 2703282 | 2703437 | 2703282 | ID=MS.gene24330.t1.exon4;Parent=MS.gene24330.t1 |
| chr1.1 | CDS | 2703282 | 2703437 | 2703282 | ID=cds.MS.gene24330.t1;Parent=MS.gene24330.t1 |
| chr1.1 | exon | 2703709 | 2703985 | 2703709 | ID=MS.gene24330.t1.exon5;Parent=MS.gene24330.t1 |
| chr1.1 | CDS | 2703709 | 2703985 | 2703709 | ID=cds.MS.gene24330.t1;Parent=MS.gene24330.t1 |
| chr1.1 | exon | 2704263 | 2704495 | 2704263 | ID=MS.gene24330.t1.exon6;Parent=MS.gene24330.t1 |
| chr1.1 | CDS | 2704263 | 2704495 | 2704263 | ID=cds.MS.gene24330.t1;Parent=MS.gene24330.t1 |
| Gene Sequence |
| Protein sequence |
