AlfalfaGEDB | MS.gene38100

M. sativa cultivar XinJiangDaYe / MS.gene38100

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene38100.t1	XP_003618009.2	96.3	162	5	1	1	161	1	162	8.00E-81	309.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene38100.t1	G7K4Z5	96.3	162	5	1	1	161	1	162	5.8e-81	309.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049150	MS.gene38100	0.80047	1.42E-48	-1.69E-46
MS.gene049153	MS.gene38100	0.805349	1.39E-49	-1.69E-46
MS.gene049346	MS.gene38100	0.819711	1.01E-52	-1.69E-46
MS.gene049356	MS.gene38100	0.835493	1.62E-56	-1.69E-46
MS.gene049369	MS.gene38100	0.815461	9.14E-52	-1.69E-46
MS.gene049661	MS.gene38100	0.851761	7.19E-61	-1.69E-46
MS.gene049662	MS.gene38100	0.841561	4.41E-58	-1.69E-46
MS.gene049758	MS.gene38100	0.857673	1.39E-62	-1.69E-46
MS.gene049910	MS.gene38100	0.818433	1.97E-52	-1.69E-46
MS.gene050128	MS.gene38100	0.826672	2.39E-54	-1.69E-46
MS.gene050301	MS.gene38100	0.843396	1.44E-58	-1.69E-46
MS.gene050397	MS.gene38100	0.819059	1.42E-52	-1.69E-46
MS.gene050432	MS.gene38100	0.810198	1.30E-50	-1.69E-46
MS.gene050464	MS.gene38100	0.822344	2.49E-53	-1.69E-46
MS.gene050529	MS.gene38100	0.803134	4.03E-49	-1.69E-46
MS.gene050670	MS.gene38100	0.834015	3.83E-56	-1.69E-46
MS.gene050971	MS.gene38100	0.806558	7.76E-50	-1.69E-46
MS.gene05101	MS.gene38100	0.805636	1.21E-49	-1.69E-46
MS.gene051860	MS.gene38100	0.840535	8.20E-58	-1.69E-46
MS.gene051877	MS.gene38100	0.802729	4.89E-49	-1.69E-46
MS.gene052077	MS.gene38100	0.843729	1.17E-58	-1.69E-46
MS.gene052078	MS.gene38100	0.8133	2.74E-51	-1.69E-46
MS.gene052178	MS.gene38100	0.816703	4.82E-52	-1.69E-46
MS.gene052188	MS.gene38100	0.834239	3.36E-56	-1.69E-46
MS.gene052253	MS.gene38100	0.854937	8.82E-62	-1.69E-46
MS.gene052255	MS.gene38100	0.803953	2.72E-49	-1.69E-46
MS.gene052310	MS.gene38100	0.827567	1.46E-54	-1.69E-46
MS.gene052340	MS.gene38100	0.84038	9.00E-58	-1.69E-46
MS.gene052421	MS.gene38100	0.803998	2.67E-49	-1.69E-46
MS.gene052485	MS.gene38100	0.814524	1.47E-51	-1.69E-46
MS.gene053073	MS.gene38100	0.807605	4.66E-50	-1.69E-46
MS.gene05316	MS.gene38100	0.827941	1.18E-54	-1.69E-46
MS.gene053209	MS.gene38100	0.80532	1.41E-49	-1.69E-46
MS.gene053449	MS.gene38100	0.806568	7.72E-50	-1.69E-46
MS.gene053557	MS.gene38100	0.805451	1.33E-49	-1.69E-46
MS.gene053836	MS.gene38100	0.867339	1.47E-65	-1.69E-46
MS.gene053928	MS.gene38100	0.829255	5.70E-55	-1.69E-46
MS.gene054010	MS.gene38100	0.811445	6.98E-51	-1.69E-46
MS.gene054011	MS.gene38100	0.819459	1.15E-52	-1.69E-46
MS.gene054012	MS.gene38100	0.811164	8.03E-51	-1.69E-46
MS.gene054013	MS.gene38100	0.801639	8.19E-49	-1.69E-46
MS.gene054123	MS.gene38100	0.830053	3.65E-55	-1.69E-46
MS.gene054183	MS.gene38100	0.816984	4.17E-52	-1.69E-46
MS.gene054349	MS.gene38100	0.82351	1.33E-53	-1.69E-46
MS.gene054473	MS.gene38100	0.819229	1.30E-52	-1.69E-46
MS.gene054918	MS.gene38100	0.806121	9.59E-50	-1.69E-46
MS.gene054930	MS.gene38100	0.82654	2.57E-54	-1.69E-46
MS.gene054955	MS.gene38100	0.80026	1.57E-48	-1.69E-46
MS.gene054983	MS.gene38100	0.801515	8.68E-49	-1.69E-46
MS.gene055116	MS.gene38100	0.871368	7.21E-67	-1.69E-46
MS.gene055277	MS.gene38100	0.833778	4.39E-56	-1.69E-46
MS.gene055422	MS.gene38100	0.842961	1.88E-58	-1.69E-46
MS.gene055428	MS.gene38100	0.838462	2.83E-57	-1.69E-46
MS.gene055604	MS.gene38100	0.822445	2.36E-53	-1.69E-46
MS.gene055712	MS.gene38100	0.80888	2.49E-50	-1.69E-46
MS.gene056191	MS.gene38100	0.827719	1.34E-54	-1.69E-46
MS.gene056407	MS.gene38100	0.840347	9.18E-58	-1.69E-46
MS.gene056511	MS.gene38100	0.832724	8.03E-56	-1.69E-46
MS.gene056612	MS.gene38100	0.806104	9.67E-50	-1.69E-46
MS.gene05702	MS.gene38100	0.862979	3.45E-64	-1.69E-46
MS.gene057124	MS.gene38100	0.806823	6.82E-50	-1.69E-46
MS.gene057396	MS.gene38100	0.819403	1.18E-52	-1.69E-46
MS.gene057448	MS.gene38100	0.836766	7.72E-57	-1.69E-46
MS.gene057449	MS.gene38100	0.828813	7.30E-55	-1.69E-46
MS.gene057450	MS.gene38100	0.837911	3.93E-57	-1.69E-46
MS.gene057469	MS.gene38100	0.804488	2.11E-49	-1.69E-46
MS.gene057749	MS.gene38100	0.830413	2.98E-55	-1.69E-46
MS.gene057750	MS.gene38100	0.805687	1.18E-49	-1.69E-46
MS.gene057754	MS.gene38100	0.805972	1.03E-49	-1.69E-46
MS.gene057779	MS.gene38100	0.803548	3.31E-49	-1.69E-46
MS.gene057823	MS.gene38100	0.831277	1.83E-55	-1.69E-46
MS.gene058002	MS.gene38100	0.837359	5.44E-57	-1.69E-46
MS.gene05811	MS.gene38100	0.821824	3.29E-53	-1.69E-46
MS.gene058660	MS.gene38100	0.822536	2.25E-53	-1.69E-46
MS.gene058710	MS.gene38100	0.802528	5.38E-49	-1.69E-46
MS.gene058787	MS.gene38100	0.809532	1.81E-50	-1.69E-46
MS.gene05886	MS.gene38100	0.804715	1.89E-49	-1.69E-46
MS.gene058928	MS.gene38100	0.848001	8.10E-60	-1.69E-46
MS.gene058949	MS.gene38100	0.817464	3.25E-52	-1.69E-46
MS.gene058995	MS.gene38100	0.819043	1.43E-52	-1.69E-46
MS.gene059011	MS.gene38100	0.804443	2.15E-49	-1.69E-46
MS.gene05907	MS.gene38100	0.857439	1.63E-62	-1.69E-46
MS.gene059285	MS.gene38100	0.841712	4.02E-58	-1.69E-46
MS.gene059294	MS.gene38100	0.810455	1.14E-50	-1.69E-46
MS.gene059366	MS.gene38100	0.808903	2.46E-50	-1.69E-46
MS.gene059420	MS.gene38100	0.840273	9.60E-58	-1.69E-46
MS.gene059462	MS.gene38100	0.817777	2.77E-52	-1.69E-46
MS.gene059597	MS.gene38100	0.845038	5.21E-59	-1.69E-46
MS.gene059676	MS.gene38100	0.804293	2.32E-49	-1.69E-46
MS.gene059688	MS.gene38100	0.851375	9.24E-61	-1.69E-46
MS.gene059692	MS.gene38100	0.84663	1.93E-59	-1.69E-46
MS.gene059695	MS.gene38100	0.844329	8.09E-59	-1.69E-46
MS.gene059807	MS.gene38100	0.850809	1.34E-60	-1.69E-46
MS.gene05984	MS.gene38100	0.822616	2.15E-53	-1.69E-46
MS.gene059876	MS.gene38100	0.836734	7.87E-57	-1.69E-46
MS.gene059894	MS.gene38100	0.824251	8.93E-54	-1.69E-46
MS.gene06037	MS.gene38100	0.879627	1.07E-69	-1.69E-46
MS.gene060403	MS.gene38100	0.853723	1.98E-61	-1.69E-46
MS.gene060495	MS.gene38100	0.856152	3.90E-62	-1.69E-46
MS.gene061049	MS.gene38100	0.88312	5.87E-71	-1.69E-46
MS.gene061051	MS.gene38100	-0.832719	8.05E-56	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene38100.t1	MTR_5g097970	96.296	162	5	1	1	161	1	162	6.15e-113	317

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene38100.t1	AT2G04790	62.069	145	52	2	15	156	36	180	6.27e-65	197
MS.gene38100.t1	AT2G04790	62.069	145	52	2	15	156	34	178	7.90e-65	196
MS.gene38100.t1	AT2G04790	62.069	145	52	2	15	156	17	161	1.01e-64	195
MS.gene38100.t1	AT2G04790	65.152	132	43	2	15	143	36	167	1.06e-61	188
MS.gene38100.t1	AT2G04790	65.152	132	43	2	15	143	34	165	1.15e-61	188
MS.gene38100.t1	AT2G04790	65.152	132	43	2	15	143	17	148	1.86e-61	187
MS.gene38100.t1	AT2G04790	64.935	77	25	1	15	89	36	112	6.00e-32	111
MS.gene38100.t1	AT2G04790	64.935	77	25	1	15	89	36	112	6.00e-32	111
MS.gene38100.t1	AT2G04790	64.935	77	25	1	15	89	17	93	1.00e-31	109
MS.gene38100.t1	AT2G04790	64.935	77	25	1	15	89	17	93	1.00e-31	109
MS.gene38100.t1	AT2G04790	64.935	77	25	1	15	89	36	112	1.49e-31	110
MS.gene38100.t1	AT2G04790	64.935	77	25	1	15	89	36	112	1.49e-31	110
MS.gene38100.t1	AT2G04790	64.935	77	25	1	15	89	17	93	2.22e-31	109
MS.gene38100.t1	AT2G04790	72.727	44	12	0	15	58	36	79	3.04e-18	75.1
MS.gene38100.t1	AT2G04790	72.727	44	12	0	15	58	36	79	3.04e-18	75.1
MS.gene38100.t1	AT2G04790	72.727	44	12	0	15	58	36	79	3.04e-18	75.1

Find 38 sgRNAs with CRISPR-Local

Find 61 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTGCTTACTCCCTTAATATT+TGG	0.106470	5.1:-78355351	MS.gene38100:CDS
GCTGCAAATCCCAAATATTA+AGG	0.224867	5.1:+78355341	None:intergenic
TGCTTACTCCCTTAATATTT+GGG	0.251158	5.1:-78355350	MS.gene38100:CDS
TATATATCTTCAGGATCTTT+TGG	0.303960	5.1:+78355112	None:intergenic
ATGTGGCAGCAATGCCTCTA+AGG	0.323320	5.1:-78355408	MS.gene38100:CDS
TTGGGATTTGCAGCATTTCA+TGG	0.365079	5.1:-78355332	MS.gene38100:CDS
GGTCCCTTTGAAGCCCTTAG+AGG	0.394810	5.1:+78355394	None:intergenic
CAAACCTTCCTCACCTTCAA+AGG	0.430343	5.1:-78355302	MS.gene38100:intron
CTGCAAATCCCAAATATTAA+GGG	0.434798	5.1:+78355342	None:intergenic
ACCAACCAGCATTTGCTTCG+CGG	0.449071	5.1:+78354909	None:intergenic
AATAGGATTGAAACCTTTGA+AGG	0.455552	5.1:+78355289	None:intergenic
AATGCCTCTAAGGGCTTCAA+AGG	0.472734	5.1:-78355398	MS.gene38100:CDS
AGTGCCGCATATATATCTTC+AGG	0.473960	5.1:+78355103	None:intergenic
TGGGAAACAGATTTGAGAAT+CGG	0.477510	5.1:-78354834	MS.gene38100:CDS
AGAAGAAGATGCTGTGGAAA+TGG	0.484961	5.1:-78354877	MS.gene38100:CDS
CGAAGCAAATGCTGGTTGGT+TGG	0.522860	5.1:-78354906	MS.gene38100:CDS
GGTTTGGTCAGACAACTCAT+TGG	0.526406	5.1:-78354606	MS.gene38100:CDS
GAAACCTTTGAAGGTGAGGA+AGG	0.532186	5.1:+78355298	None:intergenic
AGGCAGAGAGGAAGTGTATG+TGG	0.544412	5.1:-78355425	MS.gene38100:CDS
TGAATTACCTCTAGCTACCC+TGG	0.544685	5.1:+78354553	None:intergenic
TTATCTGGTAGAGCTGTGCC+AGG	0.545939	5.1:-78355073	MS.gene38100:intron
TCAAAGACAAGAATGGTAAG+AGG	0.550312	5.1:-78355445	MS.gene38100:CDS
GATTGCCGCGAAGCAAATGC+TGG	0.556329	5.1:-78354914	MS.gene38100:CDS
ACTTGTATCAAAGACAAGAA+TGG	0.568325	5.1:-78355452	MS.gene38100:CDS
TGTGGCAGCAATGCCTCTAA+GGG	0.570128	5.1:-78355407	MS.gene38100:CDS
GATTGTCGCGATTATACCAA+TGG	0.578050	5.1:-78354804	MS.gene38100:intron
ATGCCTCTAAGGGCTTCAAA+GGG	0.584284	5.1:-78355397	MS.gene38100:CDS
GATTGAAACCTTTGAAGGTG+AGG	0.593749	5.1:+78355294	None:intergenic
GCTGAAACGTTTGAGAAACC+AGG	0.597971	5.1:-78354571	MS.gene38100:CDS
GCAGCAGACATAAGCAATTG+TGG	0.599579	5.1:+78355370	None:intergenic
TCTCAGGAGCTGTTCTTGTG+AGG	0.603725	5.1:-78354947	MS.gene38100:intron
GCCGCGAAGCAAATGCTGGT+TGG	0.618375	5.1:-78354910	MS.gene38100:CDS
AAGAATGGTAAGAGGCAGAG+AGG	0.650232	5.1:-78355437	MS.gene38100:CDS
CTGAAACGTTTGAGAAACCA+GGG	0.653890	5.1:-78354570	MS.gene38100:CDS
TGAGAAACCAGGGTAGCTAG+AGG	0.673317	5.1:-78354560	None:intergenic
AGATCCTGAAGATATATATG+CGG	0.681441	5.1:-78355107	MS.gene38100:CDS
ATATGCAGAAGAAGATGCTG+TGG	0.682714	5.1:-78354883	MS.gene38100:CDS
GCAGACATAAGCAATTGTGG+TGG	0.708742	5.1:+78355373	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAAAGAAAGTGAATATTTA+TGG	+	chr5.1:78355029-78355048	None:intergenic	15.0%
!!!	TTTTCGTTAAAAAAAAGTTT+AGG	-	chr5.1:78354782-78354801	MS.gene38100:intron	15.0%
!!	AAGTGAATTCAACAAAAAAT+GGG	-	chr5.1:78355170-78355189	MS.gene38100:intron	20.0%
!!	TGATAATATACAAACACTTA+TGG	+	chr5.1:78355306-78355325	None:intergenic	20.0%
!!	TTAAACAACATTATTACCAT+TGG	+	chr5.1:78355238-78355257	None:intergenic	20.0%
!!!	TATTGCTTGTATTTATTTTC+AGG	-	chr5.1:78354868-78354887	MS.gene38100:CDS	20.0%
!!!	TGAATTTTTGGTCAATTTAT+AGG	-	chr5.1:78355396-78355415	MS.gene38100:CDS	20.0%
!!!	TTCAATCTGAATTGAATTTT+TGG	-	chr5.1:78355384-78355403	MS.gene38100:CDS	20.0%
!	ATTCTGTTCATATAATTCTC+AGG	-	chr5.1:78355060-78355079	MS.gene38100:intron	25.0%
!	CAAGTGAATTCAACAAAAAA+TGG	-	chr5.1:78355169-78355188	MS.gene38100:intron	25.0%
!	GAGAATTATATGAACAGAAT+TGG	+	chr5.1:78355060-78355079	None:intergenic	25.0%
!	TGCTACATAATTCTTTACAT+AGG	+	chr5.1:78355282-78355301	None:intergenic	25.0%
!!	TATATATCTTCAGGATCTTT+TGG	+	chr5.1:78354914-78354933	None:intergenic	25.0%
!!	TTTTGGTCAATTTATAGGTT+TGG	-	chr5.1:78355401-78355420	MS.gene38100:CDS	25.0%
	AATAGGATTGAAACCTTTGA+AGG	+	chr5.1:78354737-78354756	None:intergenic	30.0%
	ACGAAAAACCGATAAAATGT+AGG	+	chr5.1:78354769-78354788	None:intergenic	30.0%
	ACTTGTATCAAAGACAAGAA+TGG	-	chr5.1:78354571-78354590	MS.gene38100:CDS	30.0%
	AGATCCTGAAGATATATATG+CGG	-	chr5.1:78354916-78354935	MS.gene38100:CDS	30.0%
	CTGCAAATCCCAAATATTAA+GGG	+	chr5.1:78354684-78354703	None:intergenic	30.0%
	TGCTTACTCCCTTAATATTT+GGG	-	chr5.1:78354673-78354692	MS.gene38100:intron	30.0%
!	ATTCCTCTCCTACATTTTAT+CGG	-	chr5.1:78354758-78354777	MS.gene38100:intron	30.0%
!	TAACTTGTGAACTTTCTGAT+TGG	-	chr5.1:78354993-78355012	MS.gene38100:intron	30.0%
	AAACCGATAAAATGTAGGAG+AGG	+	chr5.1:78354764-78354783	None:intergenic	35.0%
	AATGTAGGAGAGGAATGAAT+AGG	+	chr5.1:78354754-78354773	None:intergenic	35.0%
	AATTAAGTCCAAATCTGACC+TGG	+	chr5.1:78354971-78354990	None:intergenic	35.0%
	CTGCTTACTCCCTTAATATT+TGG	-	chr5.1:78354672-78354691	MS.gene38100:intron	35.0%
	GCTGCAAATCCCAAATATTA+AGG	+	chr5.1:78354685-78354704	None:intergenic	35.0%
	TCAAAGACAAGAATGGTAAG+AGG	-	chr5.1:78354578-78354597	MS.gene38100:CDS	35.0%
	TGGGAAACAGATTTGAGAAT+CGG	-	chr5.1:78355189-78355208	MS.gene38100:intron	35.0%
	AGAAGAAGATGCTGTGGAAA+TGG	-	chr5.1:78355146-78355165	MS.gene38100:intron	40.0%
	AGTGCCGCATATATATCTTC+AGG	+	chr5.1:78354923-78354942	None:intergenic	40.0%
	ATATGCAGAAGAAGATGCTG+TGG	-	chr5.1:78355140-78355159	MS.gene38100:intron	40.0%
	CTGAAACGTTTGAGAAACCA+GGG	-	chr5.1:78355453-78355472	MS.gene38100:CDS	40.0%
	GATTGTCGCGATTATACCAA+TGG	-	chr5.1:78355219-78355238	MS.gene38100:intron	40.0%
	TTGGGATTTGCAGCATTTCA+TGG	-	chr5.1:78354691-78354710	MS.gene38100:intron	40.0%
!	GATTGAAACCTTTGAAGGTG+AGG	+	chr5.1:78354732-78354751	None:intergenic	40.0%
	AAGAATGGTAAGAGGCAGAG+AGG	-	chr5.1:78354586-78354605	MS.gene38100:CDS	45.0%
	CAAACCTTCCTCACCTTCAA+AGG	-	chr5.1:78354721-78354740	MS.gene38100:intron	45.0%
	GCAGACATAAGCAATTGTGG+TGG	+	chr5.1:78354653-78354672	None:intergenic	45.0%
	GCAGCAGACATAAGCAATTG+TGG	+	chr5.1:78354656-78354675	None:intergenic	45.0%
	GCTGAAACGTTTGAGAAACC+AGG	-	chr5.1:78355452-78355471	MS.gene38100:CDS	45.0%
	TTAGACGCTCTCTAAGCTTG+AGG	+	chr5.1:78354840-78354859	None:intergenic	45.0%
!	AATGCCTCTAAGGGCTTCAA+AGG	-	chr5.1:78354625-78354644	MS.gene38100:intron	45.0%
!	ATGCCTCTAAGGGCTTCAAA+GGG	-	chr5.1:78354626-78354645	MS.gene38100:intron	45.0%
!	GAAACCTTTGAAGGTGAGGA+AGG	+	chr5.1:78354728-78354747	None:intergenic	45.0%
!	GGTTTGGTCAGACAACTCAT+TGG	-	chr5.1:78355417-78355436	MS.gene38100:CDS	45.0%
	ACCAACCAGCATTTGCTTCG+CGG	+	chr5.1:78355117-78355136	None:intergenic	50.0%
	ATGTGGCAGCAATGCCTCTA+AGG	-	chr5.1:78354615-78354634	MS.gene38100:intron	50.0%
	GTCCGAATGTTCACCATCGA+CGG	-	chr5.1:78354813-78354832	MS.gene38100:CDS	50.0%
	GTCCGTCGATGGTGAACATT+CGG	+	chr5.1:78354818-78354837	None:intergenic	50.0%
	TCTCAGGAGCTGTTCTTGTG+AGG	-	chr5.1:78355076-78355095	MS.gene38100:CDS	50.0%
	TGTGGCAGCAATGCCTCTAA+GGG	-	chr5.1:78354616-78354635	MS.gene38100:intron	50.0%
	TTATCTGGTAGAGCTGTGCC+AGG	-	chr5.1:78354950-78354969	MS.gene38100:intron	50.0%
!	AGGCAGAGAGGAAGTGTATG+TGG	-	chr5.1:78354598-78354617	MS.gene38100:CDS	50.0%
!	CGAAGCAAATGCTGGTTGGT+TGG	-	chr5.1:78355117-78355136	MS.gene38100:CDS	50.0%
!!	GCGGCACTAGCAGTTTTATC+TGG	-	chr5.1:78354935-78354954	MS.gene38100:CDS	50.0%
	CTAAGCTTGAGGTCCGTCGA+TGG	+	chr5.1:78354829-78354848	None:intergenic	55.0%
	GAGCTGTGCCAGGTCAGATT+TGG	-	chr5.1:78354960-78354979	MS.gene38100:intron	55.0%
	GATTGCCGCGAAGCAAATGC+TGG	-	chr5.1:78355109-78355128	MS.gene38100:CDS	55.0%
!!	GGTCCCTTTGAAGCCCTTAG+AGG	+	chr5.1:78354632-78354651	None:intergenic	55.0%
	GCCGCGAAGCAAATGCTGGT+TGG	-	chr5.1:78355113-78355132	MS.gene38100:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.1	gene	78354563	78355482	78354563	ID=MS.gene38100
chr5.1	mRNA	78354563	78355482	78354563	ID=MS.gene38100.t1;Parent=MS.gene38100
chr5.1	exon	78355303	78355482	78355303	ID=MS.gene38100.t1.exon1;Parent=MS.gene38100.t1
chr5.1	CDS	78355303	78355482	78355303	ID=cds.MS.gene38100.t1;Parent=MS.gene38100.t1
chr5.1	exon	78355074	78355155	78355074	ID=MS.gene38100.t1.exon2;Parent=MS.gene38100.t1
chr5.1	CDS	78355074	78355155	78355074	ID=cds.MS.gene38100.t1;Parent=MS.gene38100.t1
chr5.1	exon	78354805	78354963	78354805	ID=MS.gene38100.t1.exon3;Parent=MS.gene38100.t1
chr5.1	CDS	78354805	78354963	78354805	ID=cds.MS.gene38100.t1;Parent=MS.gene38100.t1
chr5.1	exon	78354563	78354627	78354563	ID=MS.gene38100.t1.exon4;Parent=MS.gene38100.t1
chr5.1	CDS	78354563	78354627	78354563	ID=cds.MS.gene38100.t1;Parent=MS.gene38100.t1

Gene Sequence

>MS.gene38100

ATGGAATCACTTGTATCAAAGACAAGAATGGTAAGAGGCAGAGAGGAAGTGTATGTGGCAGCAATGCCTCTAAGGGCTTCAAAGGGACCACCACAATTGCTTATGTCTGCTGCTTACTCCCTTAATATTTGGGATTTGCAGCATTTCATGGTCATCATCAAACCTTCCTCACCTTCAAAGGTTTCAATCCTATTCATTCCTCTCCTACATTTTATCGGTTTTTCGTTAAAAAAAAGTTTAGGCGAGTTGAGTCCGAATGTTCACCATCGACGGACCTCAAGCTTAGAGAGCGTCTAATATATTTTTATTGCTTGTATTTATTTTCAGGTTCTAGTTTTTGATTTTCAACCAAAAGATCCTGAAGATATATATGCGGCACTAGCAGTTTTATCTGGTAGAGCTGTGCCAGGTCAGATTTGGACTTAATTCATAACTTGTGAACTTTCTGATTGGATTTTTCTCTCCATAAATATTCACTTTCTTTATATAAATCACCAATTCTGTTCATATAATTCTCAGGAGCTGTTCTTGTGAGGAAGTTAAAAAGATTGCCGCGAAGCAAATGCTGGTTGGTTGGATATGCAGAAGAAGATGCTGTGGAAATGGCAAGTGAATTCAACAAAAAATGGGAAACAGATTTGAGAATCGGTGTTAATGATTGTCGCGATTATACCAATGGTAATAATGTTGTTTAAACAATCTCATGTTACATACGTCCTATGTAAAGAATTATGTAGCATCCATAAGTGTTTGTATATTATCACTAATCACTATATCAATTAAATGATAAATTTTTAAATTATGAATATCTATGATCATGATTCAATCTGAATTGAATTTTTGGTCAATTTATAGGTTTGGTCAGACAACTCATTGGTGAAGAAGATGTGCTGAAACGTTTGAGAAACCAGGGTAGCTAG

Protein sequence

>MS.gene38100.t1

MESLVSKTRMVRGREEVYVAAMPLRASKGPPQLLMSAAYSLNIWDLQHFMVIIKPSSPSKVLVFDFQPKDPEDIYAALAVLSGRAVPGAVLVRKLKRLPRSKCWLVGYAEEDAVEMASEFNKKWETDLRIGVNDCRDYTNGLVRQLIGEEDVLKRLRNQGS