Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39361.t1 | GAU20271.1 | 47.4 | 325 | 22 | 1 | 1 | 176 | 1 | 325 | 7.20E-67 | 263.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39361.t1 | Q9LTH7 | 54.0 | 113 | 47 | 2 | 17 | 125 | 14 | 125 | 3.3e-28 | 126.3 |
| MS.gene39361.t1 | Q9LTH7 | 50.0 | 52 | 26 | 0 | 125 | 176 | 315 | 366 | 2.0e-09 | 63.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39361.t1 | G7LCM0 | 44.2 | 364 | 15 | 1 | 1 | 176 | 1 | 364 | 2.2e-65 | 258.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049346 | MS.gene39361 | 0.818672 | 1.73E-52 | -1.69E-46 |
| MS.gene049427 | MS.gene39361 | 0.810509 | 1.11E-50 | -1.69E-46 |
| MS.gene049577 | MS.gene39361 | 0.802087 | 6.63E-49 | -1.69E-46 |
| MS.gene049661 | MS.gene39361 | 0.818319 | 2.09E-52 | -1.69E-46 |
| MS.gene049662 | MS.gene39361 | 0.814462 | 1.52E-51 | -1.69E-46 |
| MS.gene050060 | MS.gene39361 | 0.830208 | 3.34E-55 | -1.69E-46 |
| MS.gene050301 | MS.gene39361 | 0.836848 | 7.36E-57 | -1.69E-46 |
| MS.gene050397 | MS.gene39361 | 0.815137 | 1.08E-51 | -1.69E-46 |
| MS.gene050404 | MS.gene39361 | 0.857505 | 1.56E-62 | -1.69E-46 |
| MS.gene050406 | MS.gene39361 | 0.884846 | 1.35E-71 | -1.69E-46 |
| MS.gene050426 | MS.gene39361 | -0.825021 | 5.88E-54 | -1.69E-46 |
| MS.gene050464 | MS.gene39361 | 0.827372 | 1.62E-54 | -1.69E-46 |
| MS.gene050529 | MS.gene39361 | 0.83013 | 3.49E-55 | -1.69E-46 |
| MS.gene050670 | MS.gene39361 | 0.838797 | 2.32E-57 | -1.69E-46 |
| MS.gene050812 | MS.gene39361 | 0.813119 | 3.01E-51 | -1.69E-46 |
| MS.gene05101 | MS.gene39361 | 0.81715 | 3.83E-52 | -1.69E-46 |
| MS.gene05105 | MS.gene39361 | 0.822141 | 2.78E-53 | -1.69E-46 |
| MS.gene051471 | MS.gene39361 | 0.825213 | 5.30E-54 | -1.69E-46 |
| MS.gene051525 | MS.gene39361 | 0.811101 | 8.28E-51 | -1.69E-46 |
| MS.gene051582 | MS.gene39361 | 0.857397 | 1.68E-62 | -1.69E-46 |
| MS.gene052011 | MS.gene39361 | -0.809568 | 1.77E-50 | -1.69E-46 |
| MS.gene052077 | MS.gene39361 | 0.830564 | 2.74E-55 | -1.69E-46 |
| MS.gene052134 | MS.gene39361 | 0.827969 | 1.17E-54 | -1.69E-46 |
| MS.gene052135 | MS.gene39361 | 0.838761 | 2.37E-57 | -1.69E-46 |
| MS.gene052136 | MS.gene39361 | 0.807357 | 5.26E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene39361 | 0.851052 | 1.14E-60 | -1.69E-46 |
| MS.gene052253 | MS.gene39361 | 0.852378 | 4.80E-61 | -1.69E-46 |
| MS.gene052310 | MS.gene39361 | 0.865378 | 6.17E-65 | -1.69E-46 |
| MS.gene052322 | MS.gene39361 | 0.826941 | 2.06E-54 | -1.69E-46 |
| MS.gene052340 | MS.gene39361 | 0.88192 | 1.61E-70 | -1.69E-46 |
| MS.gene052421 | MS.gene39361 | 0.818166 | 2.26E-52 | -1.69E-46 |
| MS.gene052481 | MS.gene39361 | 0.813295 | 2.75E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene39361 | 0.804144 | 2.49E-49 | -1.69E-46 |
| MS.gene052758 | MS.gene39361 | 0.805395 | 1.36E-49 | -1.69E-46 |
| MS.gene053073 | MS.gene39361 | 0.831629 | 1.50E-55 | -1.69E-46 |
| MS.gene053103 | MS.gene39361 | 0.816192 | 6.28E-52 | -1.69E-46 |
| MS.gene053209 | MS.gene39361 | 0.803281 | 3.76E-49 | -1.69E-46 |
| MS.gene053330 | MS.gene39361 | 0.836405 | 9.54E-57 | -1.69E-46 |
| MS.gene053557 | MS.gene39361 | 0.845554 | 3.78E-59 | -1.69E-46 |
| MS.gene053836 | MS.gene39361 | 0.814324 | 1.63E-51 | -1.69E-46 |
| MS.gene053912 | MS.gene39361 | 0.801435 | 9.02E-49 | -1.69E-46 |
| MS.gene053928 | MS.gene39361 | 0.805749 | 1.15E-49 | -1.69E-46 |
| MS.gene054102 | MS.gene39361 | 0.827578 | 1.45E-54 | -1.69E-46 |
| MS.gene054123 | MS.gene39361 | 0.848225 | 7.02E-60 | -1.69E-46 |
| MS.gene05413 | MS.gene39361 | 0.809475 | 1.86E-50 | -1.69E-46 |
| MS.gene054349 | MS.gene39361 | 0.816563 | 5.18E-52 | -1.69E-46 |
| MS.gene054918 | MS.gene39361 | 0.822757 | 2.00E-53 | -1.69E-46 |
| MS.gene054983 | MS.gene39361 | 0.806113 | 9.63E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene39361 | 0.881017 | 3.40E-70 | -1.69E-46 |
| MS.gene055422 | MS.gene39361 | 0.802579 | 5.25E-49 | -1.69E-46 |
| MS.gene055428 | MS.gene39361 | 0.812143 | 4.92E-51 | -1.69E-46 |
| MS.gene055539 | MS.gene39361 | 0.816187 | 6.29E-52 | -1.69E-46 |
| MS.gene05553 | MS.gene39361 | 0.879177 | 1.54E-69 | -1.69E-46 |
| MS.gene056233 | MS.gene39361 | 0.819127 | 1.37E-52 | -1.69E-46 |
| MS.gene056407 | MS.gene39361 | 0.830849 | 2.33E-55 | -1.69E-46 |
| MS.gene056511 | MS.gene39361 | 0.810344 | 1.21E-50 | -1.69E-46 |
| MS.gene056612 | MS.gene39361 | 0.828354 | 9.42E-55 | -1.69E-46 |
| MS.gene05664 | MS.gene39361 | 0.800496 | 1.40E-48 | -1.69E-46 |
| MS.gene056659 | MS.gene39361 | 0.83597 | 1.23E-56 | -1.69E-46 |
| MS.gene056719 | MS.gene39361 | 0.814992 | 1.16E-51 | -1.69E-46 |
| MS.gene056899 | MS.gene39361 | -0.815268 | 1.01E-51 | -1.69E-46 |
| MS.gene05702 | MS.gene39361 | 0.894 | 3.72E-75 | -1.69E-46 |
| MS.gene057124 | MS.gene39361 | 0.840475 | 8.50E-58 | -1.69E-46 |
| MS.gene057396 | MS.gene39361 | 0.851191 | 1.04E-60 | -1.69E-46 |
| MS.gene057450 | MS.gene39361 | 0.804153 | 2.48E-49 | -1.69E-46 |
| MS.gene057749 | MS.gene39361 | 0.811518 | 6.73E-51 | -1.69E-46 |
| MS.gene057823 | MS.gene39361 | 0.800229 | 1.59E-48 | -1.69E-46 |
| MS.gene057825 | MS.gene39361 | 0.832747 | 7.92E-56 | -1.69E-46 |
| MS.gene058002 | MS.gene39361 | 0.828882 | 7.02E-55 | -1.69E-46 |
| MS.gene058007 | MS.gene39361 | 0.827848 | 1.25E-54 | -1.69E-46 |
| MS.gene058142 | MS.gene39361 | 0.848779 | 4.93E-60 | -1.69E-46 |
| MS.gene058233 | MS.gene39361 | 0.836439 | 9.35E-57 | -1.69E-46 |
| MS.gene058276 | MS.gene39361 | 0.845467 | 3.99E-59 | -1.69E-46 |
| MS.gene058660 | MS.gene39361 | 0.808116 | 3.63E-50 | -1.69E-46 |
| MS.gene058700 | MS.gene39361 | 0.816217 | 6.20E-52 | -1.69E-46 |
| MS.gene058746 | MS.gene39361 | 0.812955 | 3.27E-51 | -1.69E-46 |
| MS.gene05886 | MS.gene39361 | 0.826193 | 3.10E-54 | -1.69E-46 |
| MS.gene058928 | MS.gene39361 | 0.829214 | 5.84E-55 | -1.69E-46 |
| MS.gene059011 | MS.gene39361 | 0.852075 | 5.86E-61 | -1.69E-46 |
| MS.gene05907 | MS.gene39361 | 0.823099 | 1.66E-53 | -1.69E-46 |
| MS.gene059141 | MS.gene39361 | 0.815566 | 8.66E-52 | -1.69E-46 |
| MS.gene059285 | MS.gene39361 | 0.830166 | 3.42E-55 | -1.69E-46 |
| MS.gene059420 | MS.gene39361 | 0.818773 | 1.65E-52 | -1.69E-46 |
| MS.gene059597 | MS.gene39361 | 0.836867 | 7.27E-57 | -1.69E-46 |
| MS.gene05959 | MS.gene39361 | 0.801496 | 8.76E-49 | -1.69E-46 |
| MS.gene059676 | MS.gene39361 | 0.813531 | 2.44E-51 | -1.69E-46 |
| MS.gene059688 | MS.gene39361 | 0.85723 | 1.88E-62 | -1.69E-46 |
| MS.gene059692 | MS.gene39361 | 0.858303 | 9.04E-63 | -1.69E-46 |
| MS.gene059695 | MS.gene39361 | 0.857448 | 1.62E-62 | -1.69E-46 |
| MS.gene059894 | MS.gene39361 | 0.864621 | 1.07E-64 | -1.69E-46 |
| MS.gene060247 | MS.gene39361 | 0.82522 | 5.28E-54 | -1.69E-46 |
| MS.gene060403 | MS.gene39361 | 0.841309 | 5.14E-58 | -1.69E-46 |
| MS.gene060407 | MS.gene39361 | 0.856692 | 2.71E-62 | -1.69E-46 |
| MS.gene061049 | MS.gene39361 | 0.880169 | 6.85E-70 | -1.69E-46 |
| MS.gene061051 | MS.gene39361 | -0.815284 | 1.00E-51 | -1.69E-46 |
| MS.gene061154 | MS.gene39361 | 0.811077 | 8.39E-51 | -1.69E-46 |
| MS.gene061159 | MS.gene39361 | 0.872895 | 2.24E-67 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39361.t1 | MTR_8g009160 | 89.683 | 126 | 13 | 0 | 1 | 126 | 1 | 126 | 3.33e-79 | 239 |
| MS.gene39361.t1 | MTR_8g009160 | 94.231 | 52 | 3 | 0 | 125 | 176 | 313 | 364 | 1.12e-26 | 103 |
| MS.gene39361.t1 | MTR_8g009170 | 90.476 | 126 | 12 | 0 | 1 | 126 | 1 | 126 | 1.08e-78 | 236 |
| MS.gene39361.t1 | MTR_8g009170 | 90.476 | 126 | 12 | 0 | 1 | 126 | 1 | 126 | 5.00e-78 | 237 |
| MS.gene39361.t1 | MTR_8g009170 | 90.385 | 52 | 4 | 1 | 126 | 176 | 315 | 366 | 3.13e-24 | 97.4 |
| MS.gene39361.t1 | MTR_8g009110 | 88.889 | 126 | 14 | 0 | 1 | 126 | 1 | 126 | 1.71e-77 | 235 |
| MS.gene39361.t1 | MTR_8g009110 | 80.392 | 51 | 10 | 0 | 126 | 176 | 315 | 365 | 3.10e-22 | 92.0 |
| MS.gene39361.t1 | MTR_8g008930 | 90.323 | 124 | 12 | 0 | 1 | 124 | 1 | 124 | 8.64e-77 | 233 |
| MS.gene39361.t1 | MTR_8g008930 | 82.353 | 51 | 9 | 0 | 126 | 176 | 315 | 365 | 7.74e-22 | 90.9 |
| MS.gene39361.t1 | MTR_8g009090 | 89.516 | 124 | 13 | 0 | 1 | 124 | 1 | 124 | 4.14e-76 | 232 |
| MS.gene39361.t1 | MTR_8g009090 | 82.353 | 51 | 9 | 0 | 126 | 176 | 314 | 364 | 1.32e-22 | 92.8 |
| MS.gene39361.t1 | MTR_8g028435 | 87.302 | 126 | 16 | 0 | 1 | 126 | 1 | 126 | 1.23e-75 | 231 |
| MS.gene39361.t1 | MTR_8g028435 | 86.000 | 50 | 7 | 0 | 127 | 176 | 315 | 364 | 1.32e-22 | 92.8 |
| MS.gene39361.t1 | MTR_8g009120 | 84.677 | 124 | 19 | 0 | 1 | 124 | 1 | 124 | 3.13e-71 | 219 |
| MS.gene39361.t1 | MTR_8g009120 | 81.633 | 49 | 9 | 0 | 128 | 176 | 305 | 353 | 6.56e-21 | 88.2 |
| MS.gene39361.t1 | MTR_8g009150 | 83.871 | 124 | 20 | 0 | 1 | 124 | 1 | 124 | 3.45e-71 | 219 |
| MS.gene39361.t1 | MTR_8g009150 | 82.000 | 50 | 9 | 0 | 127 | 176 | 296 | 345 | 5.54e-22 | 90.9 |
| MS.gene39361.t1 | MTR_4g117880 | 75.397 | 126 | 31 | 0 | 1 | 126 | 1 | 126 | 9.68e-66 | 205 |
| MS.gene39361.t1 | MTR_4g117880 | 66.667 | 51 | 16 | 1 | 127 | 176 | 316 | 366 | 1.94e-14 | 70.1 |
| MS.gene39361.t1 | MTR_2g069090 | 69.565 | 115 | 31 | 2 | 15 | 126 | 20 | 133 | 4.90e-49 | 162 |
| MS.gene39361.t1 | MTR_2g069090 | 62.963 | 54 | 20 | 0 | 123 | 176 | 319 | 372 | 2.71e-17 | 78.2 |
| MS.gene39361.t1 | MTR_2g069210 | 63.281 | 128 | 42 | 3 | 2 | 126 | 4 | 129 | 1.31e-46 | 156 |
| MS.gene39361.t1 | MTR_2g069210 | 70.000 | 50 | 15 | 0 | 127 | 176 | 318 | 367 | 4.71e-19 | 83.2 |
| MS.gene39361.t1 | MTR_2g069190 | 53.020 | 149 | 61 | 4 | 15 | 156 | 20 | 166 | 1.01e-44 | 151 |
| MS.gene39361.t1 | MTR_2g069190 | 70.370 | 54 | 16 | 0 | 123 | 176 | 318 | 371 | 6.03e-20 | 85.9 |
| MS.gene39361.t1 | MTR_2g069300 | 53.521 | 142 | 58 | 3 | 15 | 153 | 6 | 142 | 1.33e-43 | 148 |
| MS.gene39361.t1 | MTR_2g069300 | 40.476 | 84 | 43 | 2 | 93 | 176 | 282 | 358 | 1.32e-15 | 73.6 |
| MS.gene39361.t1 | MTR_1g043770 | 59.813 | 107 | 41 | 2 | 19 | 124 | 11 | 116 | 7.45e-39 | 134 |
| MS.gene39361.t1 | MTR_1g043770 | 59.813 | 107 | 41 | 2 | 19 | 124 | 11 | 116 | 1.42e-38 | 135 |
| MS.gene39361.t1 | MTR_1g043770 | 34.513 | 113 | 65 | 3 | 66 | 176 | 250 | 355 | 6.55e-15 | 71.6 |
| MS.gene39361.t1 | MTR_1g043775 | 48.611 | 144 | 68 | 3 | 17 | 155 | 9 | 151 | 1.17e-37 | 131 |
| MS.gene39361.t1 | MTR_1g043760 | 59.091 | 110 | 42 | 2 | 17 | 124 | 9 | 117 | 2.67e-37 | 132 |
| MS.gene39361.t1 | MTR_1g043775 | 48.611 | 144 | 68 | 3 | 17 | 155 | 9 | 151 | 3.55e-37 | 131 |
| MS.gene39361.t1 | MTR_1g043775 | 56.250 | 48 | 21 | 0 | 129 | 176 | 310 | 357 | 8.10e-11 | 60.1 |
| MS.gene39361.t1 | MTR_1g044105 | 53.913 | 115 | 45 | 2 | 17 | 124 | 9 | 122 | 1.00e-36 | 125 |
| MS.gene39361.t1 | MTR_8g009080 | 53.521 | 142 | 57 | 5 | 6 | 144 | 38 | 173 | 3.25e-36 | 128 |
| MS.gene39361.t1 | MTR_8g009080 | 53.521 | 142 | 57 | 5 | 6 | 144 | 38 | 173 | 4.80e-36 | 128 |
| MS.gene39361.t1 | MTR_8g009080 | 53.521 | 142 | 57 | 5 | 6 | 144 | 38 | 173 | 1.16e-35 | 128 |
| MS.gene39361.t1 | MTR_8g009080 | 67.308 | 52 | 17 | 0 | 125 | 176 | 346 | 397 | 1.21e-17 | 79.3 |
| MS.gene39361.t1 | MTR_1g043810 | 45.139 | 144 | 73 | 3 | 17 | 155 | 9 | 151 | 7.84e-35 | 124 |
| MS.gene39361.t1 | MTR_1g043810 | 45.139 | 144 | 73 | 3 | 17 | 155 | 9 | 151 | 1.62e-34 | 124 |
| MS.gene39361.t1 | MTR_1g043810 | 56.250 | 48 | 21 | 0 | 129 | 176 | 310 | 357 | 2.04e-11 | 61.6 |
| MS.gene39361.t1 | MTR_1g093140 | 45.255 | 137 | 56 | 5 | 4 | 124 | 3 | 136 | 8.43e-32 | 117 |
| MS.gene39361.t1 | MTR_7g078010 | 50.000 | 110 | 52 | 2 | 17 | 124 | 22 | 130 | 3.48e-31 | 114 |
| MS.gene39361.t1 | MTR_8g006930 | 43.571 | 140 | 73 | 3 | 17 | 151 | 22 | 160 | 1.40e-30 | 114 |
| MS.gene39361.t1 | MTR_8g006930 | 32.432 | 111 | 59 | 3 | 73 | 176 | 272 | 373 | 6.55e-13 | 65.9 |
| MS.gene39361.t1 | MTR_7g078010 | 50.000 | 110 | 52 | 2 | 17 | 124 | 22 | 130 | 1.65e-30 | 114 |
| MS.gene39361.t1 | MTR_8g063070 | 45.902 | 122 | 60 | 4 | 10 | 126 | 12 | 132 | 2.24e-30 | 114 |
| MS.gene39361.t1 | MTR_4g024660 | 48.305 | 118 | 55 | 3 | 12 | 124 | 14 | 130 | 2.70e-30 | 113 |
| MS.gene39361.t1 | MTR_4g024660 | 54.000 | 50 | 23 | 0 | 127 | 176 | 324 | 373 | 3.26e-12 | 63.9 |
| MS.gene39361.t1 | MTR_2g068950 | 39.645 | 169 | 88 | 5 | 1 | 162 | 1 | 162 | 4.46e-30 | 113 |
| MS.gene39361.t1 | MTR_1g093120 | 46.087 | 115 | 53 | 4 | 17 | 124 | 18 | 130 | 5.08e-30 | 112 |
| MS.gene39361.t1 | MTR_8g062600 | 46.457 | 127 | 52 | 4 | 10 | 126 | 12 | 132 | 7.87e-30 | 112 |
| MS.gene39361.t1 | MTR_8g062600 | 52.000 | 50 | 24 | 0 | 127 | 176 | 324 | 373 | 1.10e-12 | 65.5 |
| MS.gene39361.t1 | MTR_7g056347 | 48.214 | 112 | 55 | 3 | 15 | 124 | 20 | 130 | 1.14e-29 | 112 |
| MS.gene39361.t1 | MTR_7g056347 | 46.296 | 54 | 29 | 0 | 123 | 176 | 320 | 373 | 1.91e-13 | 67.4 |
| MS.gene39361.t1 | MTR_8g041600 | 53.509 | 114 | 45 | 3 | 17 | 124 | 22 | 133 | 1.59e-29 | 110 |
| MS.gene39361.t1 | MTR_4g119410 | 47.458 | 118 | 56 | 4 | 12 | 124 | 14 | 130 | 3.13e-29 | 110 |
| MS.gene39361.t1 | MTR_4g119410 | 49.020 | 51 | 26 | 0 | 126 | 176 | 323 | 373 | 1.37e-12 | 65.1 |
| MS.gene39361.t1 | MTR_4g099380 | 48.649 | 111 | 45 | 3 | 19 | 124 | 129 | 232 | 4.73e-29 | 108 |
| MS.gene39361.t1 | MTR_2g068960 | 41.420 | 169 | 85 | 6 | 1 | 162 | 1 | 162 | 5.65e-29 | 110 |
| MS.gene39361.t1 | MTR_8g041600 | 53.509 | 114 | 45 | 3 | 17 | 124 | 22 | 133 | 6.49e-29 | 110 |
| MS.gene39361.t1 | MTR_8g041600 | 56.250 | 48 | 21 | 0 | 129 | 176 | 327 | 374 | 1.80e-12 | 64.7 |
| MS.gene39361.t1 | MTR_8g041620 | 53.509 | 114 | 45 | 3 | 17 | 124 | 22 | 133 | 1.42e-28 | 109 |
| MS.gene39361.t1 | MTR_8g041620 | 58.333 | 48 | 20 | 0 | 129 | 176 | 327 | 374 | 3.90e-12 | 63.9 |
| MS.gene39361.t1 | MTR_1g093110 | 45.299 | 117 | 53 | 4 | 17 | 124 | 19 | 133 | 4.63e-27 | 105 |
| MS.gene39361.t1 | MTR_1g093110 | 33.019 | 106 | 63 | 2 | 73 | 176 | 275 | 374 | 8.40e-12 | 62.8 |
| MS.gene39361.t1 | MTR_7g029655 | 43.966 | 116 | 54 | 2 | 15 | 123 | 15 | 126 | 7.44e-25 | 99.0 |
| MS.gene39361.t1 | MTR_7g029655 | 58.333 | 48 | 20 | 0 | 129 | 176 | 323 | 370 | 1.37e-13 | 67.8 |
| MS.gene39361.t1 | MTR_2g069020 | 42.478 | 113 | 60 | 2 | 16 | 124 | 19 | 130 | 3.85e-24 | 97.1 |
| MS.gene39361.t1 | MTR_7g056393 | 44.545 | 110 | 58 | 2 | 17 | 124 | 22 | 130 | 4.23e-24 | 97.1 |
| MS.gene39361.t1 | MTR_7g056393 | 50.000 | 54 | 27 | 0 | 123 | 176 | 320 | 373 | 5.25e-14 | 68.9 |
| MS.gene39361.t1 | MTR_2g069010 | 40.708 | 113 | 62 | 2 | 16 | 124 | 21 | 132 | 4.45e-24 | 97.1 |
| MS.gene39361.t1 | MTR_2g069020 | 42.478 | 113 | 60 | 2 | 16 | 124 | 19 | 130 | 5.81e-24 | 97.1 |
| MS.gene39361.t1 | MTR_1g070185 | 41.667 | 108 | 63 | 0 | 17 | 124 | 23 | 130 | 1.67e-23 | 95.5 |
| MS.gene39361.t1 | MTR_1g070185 | 47.917 | 48 | 25 | 0 | 129 | 176 | 320 | 367 | 8.41e-11 | 59.7 |
| MS.gene39361.t1 | MTR_8g009180 | 88.235 | 51 | 6 | 0 | 126 | 176 | 244 | 294 | 1.88e-23 | 94.4 |
| MS.gene39361.t1 | MTR_8g469400 | 43.307 | 127 | 54 | 4 | 5 | 126 | 7 | 120 | 6.89e-23 | 93.6 |
| MS.gene39361.t1 | MTR_8g469400 | 54.000 | 50 | 23 | 0 | 127 | 176 | 311 | 360 | 1.56e-12 | 64.7 |
| MS.gene39361.t1 | MTR_0032s0040 | 45.378 | 119 | 51 | 2 | 15 | 123 | 15 | 129 | 2.16e-22 | 92.4 |
| MS.gene39361.t1 | MTR_0032s0040 | 50.000 | 48 | 24 | 0 | 129 | 176 | 326 | 373 | 3.36e-11 | 60.8 |
| MS.gene39361.t1 | MTR_7g056370 | 34.266 | 143 | 80 | 5 | 18 | 151 | 2 | 139 | 3.23e-22 | 89.4 |
| MS.gene39361.t1 | MTR_7g105070 | 39.815 | 108 | 60 | 2 | 19 | 123 | 15 | 120 | 8.64e-20 | 85.1 |
| MS.gene39361.t1 | MTR_8g008960 | 67.308 | 52 | 17 | 0 | 125 | 176 | 51 | 102 | 1.65e-19 | 79.3 |
| MS.gene39361.t1 | MTR_1g032250 | 38.182 | 110 | 60 | 2 | 19 | 124 | 28 | 133 | 1.90e-19 | 84.3 |
| MS.gene39361.t1 | MTR_1g032140 | 37.600 | 125 | 70 | 2 | 4 | 124 | 6 | 126 | 2.06e-19 | 84.3 |
| MS.gene39361.t1 | MTR_1g032220 | 38.182 | 110 | 60 | 2 | 19 | 124 | 28 | 133 | 9.05e-19 | 82.4 |
| MS.gene39361.t1 | MTR_7g068650 | 34.426 | 122 | 73 | 3 | 19 | 133 | 6 | 127 | 1.95e-18 | 81.6 |
| MS.gene39361.t1 | MTR_1g043840 | 61.111 | 54 | 21 | 0 | 71 | 124 | 256 | 309 | 7.71e-18 | 79.7 |
| MS.gene39361.t1 | MTR_2g069070 | 40.541 | 111 | 45 | 3 | 16 | 124 | 21 | 112 | 1.54e-17 | 76.3 |
| MS.gene39361.t1 | MTR_2g069060 | 40.541 | 111 | 45 | 3 | 16 | 124 | 21 | 112 | 4.51e-16 | 74.7 |
| MS.gene39361.t1 | MTR_2g069060 | 60.000 | 45 | 17 | 1 | 132 | 176 | 306 | 349 | 5.68e-11 | 60.5 |
| MS.gene39361.t1 | MTR_2g068850 | 39.394 | 99 | 54 | 3 | 27 | 123 | 21 | 115 | 1.22e-15 | 72.0 |
| MS.gene39361.t1 | MTR_2g068840 | 39.394 | 99 | 54 | 3 | 27 | 123 | 21 | 115 | 1.38e-14 | 70.9 |
| MS.gene39361.t1 | MTR_3g091350 | 31.429 | 140 | 82 | 3 | 3 | 137 | 6 | 136 | 1.89e-14 | 70.5 |
| MS.gene39361.t1 | MTR_2g068800 | 39.560 | 91 | 51 | 2 | 27 | 116 | 21 | 108 | 3.87e-14 | 68.9 |
| MS.gene39361.t1 | MTR_4g015790 | 28.244 | 131 | 78 | 2 | 19 | 133 | 5 | 135 | 9.26e-13 | 65.5 |
| MS.gene39361.t1 | MTR_2g069060 | 45.070 | 71 | 38 | 1 | 54 | 124 | 21 | 90 | 1.03e-12 | 64.7 |
| MS.gene39361.t1 | MTR_1g034140 | 45.588 | 68 | 31 | 1 | 60 | 127 | 27 | 88 | 1.89e-12 | 64.7 |
| MS.gene39361.t1 | MTR_3g070860 | 27.966 | 118 | 82 | 1 | 19 | 133 | 6 | 123 | 1.92e-12 | 64.7 |
| MS.gene39361.t1 | MTR_5g082750 | 36.486 | 74 | 47 | 0 | 60 | 133 | 49 | 122 | 1.84e-11 | 61.6 |
| MS.gene39361.t1 | MTR_7g056353 | 30.597 | 134 | 63 | 4 | 21 | 151 | 28 | 134 | 2.09e-11 | 61.6 |
| MS.gene39361.t1 | MTR_3g045230 | 34.211 | 114 | 55 | 3 | 27 | 130 | 17 | 120 | 2.98e-11 | 61.2 |
| MS.gene39361.t1 | MTR_4g087130 | 41.176 | 68 | 37 | 1 | 60 | 124 | 26 | 93 | 3.50e-11 | 60.8 |
| MS.gene39361.t1 | MTR_3g043900 | 35.455 | 110 | 57 | 3 | 27 | 129 | 17 | 119 | 3.75e-11 | 60.8 |
| MS.gene39361.t1 | MTR_4g087120 | 41.429 | 70 | 38 | 1 | 60 | 126 | 26 | 95 | 5.65e-11 | 60.5 |
| MS.gene39361.t1 | MTR_5g055800 | 34.314 | 102 | 61 | 3 | 27 | 126 | 12 | 109 | 6.09e-11 | 60.1 |
| MS.gene39361.t1 | MTR_0009s0410 | 30.189 | 106 | 68 | 2 | 28 | 131 | 12 | 113 | 9.81e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39361.t1 | AT5G59540 | 53.509 | 114 | 48 | 2 | 17 | 126 | 14 | 126 | 8.83e-35 | 123 |
| MS.gene39361.t1 | AT5G59540 | 53.509 | 114 | 48 | 2 | 17 | 126 | 14 | 126 | 2.55e-34 | 124 |
| MS.gene39361.t1 | AT5G59540 | 50.000 | 52 | 26 | 0 | 125 | 176 | 315 | 366 | 2.09e-12 | 64.7 |
| MS.gene39361.t1 | AT1G06640 | 48.872 | 133 | 55 | 5 | 4 | 126 | 1 | 130 | 5.12e-31 | 114 |
| MS.gene39361.t1 | AT5G59530 | 52.632 | 114 | 46 | 4 | 17 | 125 | 13 | 123 | 5.45e-31 | 115 |
| MS.gene39361.t1 | AT5G59530 | 50.000 | 52 | 26 | 0 | 125 | 176 | 313 | 364 | 6.15e-12 | 63.2 |
| MS.gene39361.t1 | AT1G06640 | 48.872 | 133 | 55 | 5 | 4 | 126 | 1 | 130 | 5.66e-31 | 114 |
| MS.gene39361.t1 | AT1G06620 | 51.376 | 109 | 49 | 2 | 19 | 124 | 18 | 125 | 1.66e-30 | 112 |
| MS.gene39361.t1 | AT1G06640 | 48.872 | 133 | 55 | 5 | 4 | 126 | 1 | 130 | 1.91e-30 | 114 |
| MS.gene39361.t1 | AT1G06640 | 58.824 | 51 | 21 | 0 | 126 | 176 | 319 | 369 | 1.37e-14 | 70.9 |
| MS.gene39361.t1 | AT1G04350 | 43.137 | 153 | 74 | 5 | 14 | 158 | 8 | 155 | 2.25e-30 | 114 |
| MS.gene39361.t1 | AT1G04350 | 51.923 | 52 | 25 | 0 | 125 | 176 | 309 | 360 | 3.05e-11 | 61.2 |
| MS.gene39361.t1 | AT1G06645 | 48.361 | 122 | 56 | 2 | 9 | 124 | 21 | 141 | 4.71e-30 | 113 |
| MS.gene39361.t1 | AT1G06645 | 62.745 | 51 | 19 | 0 | 126 | 176 | 329 | 379 | 3.41e-17 | 78.2 |
| MS.gene39361.t1 | AT1G06620 | 51.376 | 109 | 49 | 2 | 19 | 124 | 18 | 125 | 5.54e-30 | 112 |
| MS.gene39361.t1 | AT1G06620 | 52.941 | 51 | 24 | 0 | 126 | 176 | 315 | 365 | 1.28e-13 | 68.2 |
| MS.gene39361.t1 | AT1G03410 | 48.246 | 114 | 53 | 2 | 16 | 124 | 8 | 120 | 2.46e-29 | 110 |
| MS.gene39361.t1 | AT1G03410 | 41.447 | 152 | 78 | 4 | 16 | 158 | 45 | 194 | 3.04e-29 | 111 |
| MS.gene39361.t1 | AT5G43440 | 47.107 | 121 | 56 | 2 | 15 | 129 | 11 | 129 | 3.67e-29 | 109 |
| MS.gene39361.t1 | AT2G30830 | 47.748 | 111 | 57 | 1 | 17 | 126 | 10 | 120 | 8.83e-29 | 109 |
| MS.gene39361.t1 | AT2G30830 | 56.522 | 46 | 20 | 0 | 131 | 176 | 313 | 358 | 3.14e-12 | 63.9 |
| MS.gene39361.t1 | AT5G43440 | 47.107 | 121 | 56 | 2 | 15 | 129 | 11 | 129 | 1.23e-28 | 109 |
| MS.gene39361.t1 | AT1G06650 | 47.826 | 115 | 54 | 2 | 16 | 124 | 14 | 128 | 3.34e-28 | 107 |
| MS.gene39361.t1 | AT1G06650 | 47.826 | 115 | 54 | 2 | 16 | 124 | 14 | 128 | 5.88e-28 | 107 |
| MS.gene39361.t1 | AT1G06650 | 62.745 | 51 | 19 | 0 | 126 | 176 | 319 | 369 | 1.59e-17 | 79.0 |
| MS.gene39361.t1 | AT3G61400 | 41.406 | 128 | 68 | 2 | 4 | 124 | 1 | 128 | 2.21e-27 | 104 |
| MS.gene39361.t1 | AT2G30840 | 46.491 | 114 | 56 | 2 | 16 | 124 | 9 | 122 | 3.21e-27 | 104 |
| MS.gene39361.t1 | AT3G61400 | 41.406 | 128 | 68 | 2 | 4 | 124 | 1 | 128 | 4.16e-27 | 105 |
| MS.gene39361.t1 | AT2G30840 | 46.491 | 114 | 56 | 2 | 16 | 124 | 9 | 122 | 6.96e-27 | 104 |
| MS.gene39361.t1 | AT2G30840 | 54.167 | 48 | 22 | 0 | 129 | 176 | 315 | 362 | 8.99e-11 | 59.7 |
| MS.gene39361.t1 | AT2G30840 | 46.491 | 114 | 56 | 2 | 16 | 124 | 9 | 122 | 6.98e-27 | 104 |
| MS.gene39361.t1 | AT2G30840 | 54.167 | 48 | 22 | 0 | 129 | 176 | 309 | 356 | 9.05e-11 | 59.7 |
| MS.gene39361.t1 | AT2G25450 | 46.018 | 113 | 58 | 2 | 16 | 126 | 9 | 120 | 2.67e-26 | 102 |
| MS.gene39361.t1 | AT5G43450 | 44.828 | 116 | 54 | 3 | 15 | 124 | 11 | 122 | 4.28e-26 | 101 |
| MS.gene39361.t1 | AT5G43450 | 44.828 | 116 | 54 | 3 | 15 | 124 | 11 | 122 | 9.65e-26 | 101 |
| MS.gene39361.t1 | AT1G03400 | 43.363 | 113 | 51 | 3 | 16 | 124 | 8 | 111 | 1.44e-22 | 92.8 |
| MS.gene39361.t1 | AT1G03400 | 43.363 | 113 | 51 | 3 | 16 | 124 | 8 | 111 | 1.95e-22 | 92.8 |
| MS.gene39361.t1 | AT1G04380 | 40.541 | 111 | 48 | 3 | 16 | 125 | 13 | 106 | 2.44e-20 | 85.5 |
| MS.gene39361.t1 | AT1G04380 | 40.541 | 111 | 48 | 3 | 16 | 125 | 13 | 106 | 5.24e-20 | 85.5 |
| MS.gene39361.t1 | AT1G04380 | 51.923 | 52 | 25 | 0 | 125 | 176 | 294 | 345 | 1.67e-12 | 64.7 |
| MS.gene39361.t1 | AT3G13610 | 34.821 | 112 | 58 | 4 | 27 | 132 | 26 | 128 | 1.69e-13 | 67.8 |
| MS.gene39361.t1 | AT1G55290 | 37.168 | 113 | 55 | 5 | 27 | 132 | 25 | 128 | 2.24e-13 | 67.4 |
| MS.gene39361.t1 | AT2G38240 | 29.661 | 118 | 74 | 2 | 20 | 133 | 4 | 116 | 1.45e-12 | 65.1 |
| MS.gene39361.t1 | AT3G19010 | 43.836 | 73 | 39 | 1 | 55 | 127 | 23 | 93 | 2.71e-12 | 63.9 |
| MS.gene39361.t1 | AT3G19010 | 43.836 | 73 | 39 | 1 | 55 | 127 | 23 | 93 | 2.80e-12 | 63.9 |
| MS.gene39361.t1 | AT3G19010 | 43.836 | 73 | 39 | 1 | 55 | 127 | 23 | 93 | 2.80e-12 | 63.9 |
| MS.gene39361.t1 | AT3G19010 | 43.836 | 73 | 39 | 1 | 55 | 127 | 23 | 93 | 3.57e-12 | 63.5 |
| MS.gene39361.t1 | AT3G12900 | 36.082 | 97 | 61 | 1 | 27 | 123 | 21 | 116 | 9.07e-12 | 62.8 |
| MS.gene39361.t1 | AT2G44800 | 28.099 | 121 | 80 | 3 | 21 | 137 | 9 | 126 | 3.40e-11 | 60.8 |
| MS.gene39361.t1 | AT5G05600 | 26.866 | 134 | 86 | 3 | 4 | 133 | 10 | 135 | 9.37e-11 | 59.3 |
Find 39 sgRNAs with CRISPR-Local
Find 111 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACACTAGTTTCTCTGTATT+TGG | 0.065835 | 8.3:+79864125 | None:intergenic |
| CTTTATTATCAATATCTTTA+AGG | 0.122806 | 8.3:+79865517 | None:intergenic |
| CCTCGTATTTGTCTGGTTGA+TGG | 0.287516 | 8.3:+79865577 | None:intergenic |
| ACACTAGTTTCTCTGTATTT+GGG | 0.354261 | 8.3:+79864126 | None:intergenic |
| GTTAGGTTTGGTTGTATCAA+TGG | 0.379115 | 8.3:+79865701 | None:intergenic |
| AAAGCATCCACAAAGCTCTA+TGG | 0.394492 | 8.3:-79864183 | MS.gene39361:CDS |
| TTGGCTTCCTCGTATTTGTC+TGG | 0.410058 | 8.3:+79865570 | None:intergenic |
| TCTGATAATAATTCCTTCAT+AGG | 0.414561 | 8.3:+79864159 | None:intergenic |
| ACAATTCCTTGATGAATACT+TGG | 0.419418 | 8.3:+79865492 | None:intergenic |
| TCAAGGAAGCATGTGAAACT+TGG | 0.431792 | 8.3:-79865461 | MS.gene39361:CDS |
| TTGAATGTGGAATCAAGGTT+AGG | 0.444552 | 8.3:+79865684 | None:intergenic |
| TTTCGAGCAAAAGGACTAGA+TGG | 0.446957 | 8.3:-79864084 | MS.gene39361:CDS |
| GTGGCCTACTTTCGAGCAAA+AGG | 0.449952 | 8.3:-79864093 | MS.gene39361:CDS |
| GTTCTTGAGGAGGTGAAAGA+TGG | 0.464397 | 8.3:-79865399 | MS.gene39361:CDS |
| GTTCATTGAATGTGGAATCA+AGG | 0.469424 | 8.3:+79865679 | None:intergenic |
| CATAGGTCCATAGAGCTTTG+TGG | 0.481946 | 8.3:+79864176 | None:intergenic |
| AATAACATGACTTGTGTTGT+TGG | 0.488088 | 8.3:+79865551 | None:intergenic |
| TGTGGAATCAAGGTTAGGTT+TGG | 0.492547 | 8.3:+79865689 | None:intergenic |
| CCCTTTGAGTGTTCTTGAGG+AGG | 0.493576 | 8.3:-79865409 | MS.gene39361:CDS |
| CAAGGAAGCATGTGAAACTT+GGG | 0.494320 | 8.3:-79865460 | MS.gene39361:CDS |
| AAAGCTCTATGGACCTATGA+AGG | 0.525118 | 8.3:-79864172 | MS.gene39361:CDS |
| AGGAATTGTTGACGATATCA+AGG | 0.530296 | 8.3:-79865478 | MS.gene39361:CDS |
| GAAACAAAAGCAGGTGTGAA+AGG | 0.532657 | 8.3:-79865642 | MS.gene39361:CDS |
| TGCTTTGCGTTCATTGAATG+TGG | 0.544374 | 8.3:+79865671 | None:intergenic |
| AATCCCTTTGAGTGTTCTTG+AGG | 0.545874 | 8.3:-79865412 | MS.gene39361:CDS |
| ACCTCCTCAAGAACACTCAA+AGG | 0.547379 | 8.3:+79865408 | None:intergenic |
| CCTCCTCAAGAACACTCAAA+GGG | 0.551009 | 8.3:+79865409 | None:intergenic |
| AGGTGAAAGATGGAGTGAAG+AGG | 0.558342 | 8.3:-79865389 | MS.gene39361:CDS |
| AACTAGTGTTGCTGATTATG+TGG | 0.561302 | 8.3:-79864112 | MS.gene39361:CDS |
| CGTATTTGTCTGGTTGATGG+TGG | 0.562970 | 8.3:+79865580 | None:intergenic |
| CAATTCCTTGATGAATACTT+GGG | 0.576394 | 8.3:+79865493 | None:intergenic |
| CTAGTTTCTCTGTATTTGGG+AGG | 0.580147 | 8.3:+79864129 | None:intergenic |
| ATATCTTTAAGGTCGATGAC+AGG | 0.590653 | 8.3:+79865528 | None:intergenic |
| GTGAAAGGACTTGTTGATGC+AGG | 0.590786 | 8.3:-79865627 | MS.gene39361:CDS |
| GCATTTGATGAAACAAAAGC+AGG | 0.595830 | 8.3:-79865651 | MS.gene39361:CDS |
| AAAGACCCAAGTATTCATCA+AGG | 0.600194 | 8.3:-79865498 | MS.gene39361:CDS |
| GGTTGATGGTGGAATAAGCT+TGG | 0.607514 | 8.3:+79865591 | None:intergenic |
| AAGGAAGCATGTGAAACTTG+GGG | 0.628246 | 8.3:-79865459 | MS.gene39361:CDS |
| CCATCAACCAGACAAATACG+AGG | 0.724113 | 8.3:-79865577 | MS.gene39361:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCATAAAACAAATAAATATT+AGG | - | chr8.3:79864775-79864794 | MS.gene39361:intron | 10.0% |
| !! | CTTTATTATCAATATCTTTA+AGG | + | chr8.3:79864247-79864266 | None:intergenic | 15.0% |
| !! | TTTGAAGATATTAAATATGA+AGG | - | chr8.3:79865404-79865423 | MS.gene39361:CDS | 15.0% |
| !!! | AAAATTGCTATTGTAAATAA+AGG | + | chr8.3:79864456-79864475 | None:intergenic | 15.0% |
| !! | AAGATATTAAATATGAAGGA+TGG | - | chr8.3:79865408-79865427 | MS.gene39361:CDS | 20.0% |
| !! | AAGTTCTTTATGAAGATAAA+TGG | - | chr8.3:79865146-79865165 | MS.gene39361:intron | 20.0% |
| !! | ATTTATCTTCATAAAGAACT+TGG | + | chr8.3:79865147-79865166 | None:intergenic | 20.0% |
| !! | GTAAGGATTAAATTCAATTT+CGG | + | chr8.3:79864840-79864859 | None:intergenic | 20.0% |
| !!! | CATTATTGAATCTAAGATAA+AGG | - | chr8.3:79865354-79865373 | MS.gene39361:intron | 20.0% |
| !!! | GTTTTATATTTTGTATCAGT+TGG | + | chr8.3:79864815-79864834 | None:intergenic | 20.0% |
| !!! | TTTTTTCAAGTTGTTAATCA+TGG | - | chr8.3:79864326-79864345 | MS.gene39361:intron | 20.0% |
| ! | AGAGATGTAATACTAGAATA+TGG | - | chr8.3:79864902-79864921 | MS.gene39361:intron | 25.0% |
| ! | AGTGCATTACTAATAGTTTA+AGG | + | chr8.3:79865260-79865279 | None:intergenic | 25.0% |
| ! | ATCTTATAAATAGATCTTCC+AGG | + | chr8.3:79864750-79864769 | None:intergenic | 25.0% |
| ! | GAGATGTAATACTAGAATAT+GGG | - | chr8.3:79864903-79864922 | MS.gene39361:intron | 25.0% |
| ! | GCAACAAAAAAAAAACAGTA+AGG | + | chr8.3:79864857-79864876 | None:intergenic | 25.0% |
| ! | TCTGATAATAATTCCTTCAT+AGG | + | chr8.3:79865605-79865624 | None:intergenic | 25.0% |
| !!! | AAATATGAAGGATGGATTAT+AGG | - | chr8.3:79865416-79865435 | MS.gene39361:CDS | 25.0% |
| !!! | CACTTTAAGATGTGAAATTA+TGG | - | chr8.3:79864672-79864691 | MS.gene39361:intron | 25.0% |
| AAACATGCAACAGATATTCT+TGG | + | chr8.3:79865542-79865561 | None:intergenic | 30.0% | |
| AATACTAGAATATGGGAAAC+AGG | - | chr8.3:79864910-79864929 | MS.gene39361:intron | 30.0% | |
| ACAATTCCTTGATGAATACT+TGG | + | chr8.3:79864272-79864291 | None:intergenic | 30.0% | |
| ACTTATTGAGCAATCAGAAT+CGG | - | chr8.3:79865321-79865340 | MS.gene39361:intron | 30.0% | |
| CAATTCCTTGATGAATACTT+GGG | + | chr8.3:79864271-79864290 | None:intergenic | 30.0% | |
| CACATCTTAAAGTGAATAAG+TGG | + | chr8.3:79864666-79864685 | None:intergenic | 30.0% | |
| GCATGTGTGTAAAATTTATG+CGG | - | chr8.3:79864586-79864605 | MS.gene39361:intron | 30.0% | |
| TATGGATATTGCAACATGTA+GGG | - | chr8.3:79864617-79864636 | MS.gene39361:intron | 30.0% | |
| TCCAAACCATCTAAAAGATA+TGG | - | chr8.3:79864988-79865007 | MS.gene39361:intron | 30.0% | |
| ! | AAAGATATGGATTGTGCTAA+AGG | - | chr8.3:79865001-79865020 | MS.gene39361:intron | 30.0% |
| ! | AACACTAGTTTCTCTGTATT+TGG | + | chr8.3:79865639-79865658 | None:intergenic | 30.0% |
| ! | AATAACATGACTTGTGTTGT+TGG | + | chr8.3:79864213-79864232 | None:intergenic | 30.0% |
| ! | ACACTAGTTTCTCTGTATTT+GGG | + | chr8.3:79865638-79865657 | None:intergenic | 30.0% |
| ! | CACAATCCATATCTTTTAGA+TGG | + | chr8.3:79864997-79865016 | None:intergenic | 30.0% |
| ! | TCCATATCTTTTAGATGGTT+TGG | + | chr8.3:79864992-79865011 | None:intergenic | 30.0% |
| !!! | GGATAGTTTTAGTTGTTACT+TGG | - | chr8.3:79864508-79864527 | MS.gene39361:intron | 30.0% |
| AAAGACCCAAGTATTCATCA+AGG | - | chr8.3:79864263-79864282 | MS.gene39361:intron | 35.0% | |
| AGACTACTTGACTAAGAAGA+AGG | - | chr8.3:79864700-79864719 | MS.gene39361:intron | 35.0% | |
| AGGAATTGTTGACGATATCA+AGG | - | chr8.3:79864283-79864302 | MS.gene39361:intron | 35.0% | |
| ATTGATATAACACCTGTTCC+TGG | - | chr8.3:79865169-79865188 | MS.gene39361:intron | 35.0% | |
| GATTCTGATTGCTCAATAAG+TGG | + | chr8.3:79865322-79865341 | None:intergenic | 35.0% | |
| GCATTTGATGAAACAAAAGC+AGG | - | chr8.3:79864110-79864129 | MS.gene39361:CDS | 35.0% | |
| GTAAAATTTATGCGGTCAGT+TGG | - | chr8.3:79864594-79864613 | MS.gene39361:intron | 35.0% | |
| GTATGGATATTGCAACATGT+AGG | - | chr8.3:79864616-79864635 | MS.gene39361:intron | 35.0% | |
| GTTCATTGAATGTGGAATCA+AGG | + | chr8.3:79864085-79864104 | None:intergenic | 35.0% | |
| TTGAATGTGGAATCAAGGTT+AGG | + | chr8.3:79864080-79864099 | None:intergenic | 35.0% | |
| ! | AACTAGTGTTGCTGATTATG+TGG | - | chr8.3:79865649-79865668 | MS.gene39361:CDS | 35.0% |
| ! | ATGAAACGCATATTTTCTCC+TGG | - | chr8.3:79864729-79864748 | MS.gene39361:intron | 35.0% |
| ! | GTTAGGTTTGGTTGTATCAA+TGG | + | chr8.3:79864063-79864082 | None:intergenic | 35.0% |
| !! | ATATCTTTAAGGTCGATGAC+AGG | + | chr8.3:79864236-79864255 | None:intergenic | 35.0% |
| !! | GAATTGATGTCAGAAGCATT+AGG | - | chr8.3:79864959-79864978 | MS.gene39361:intron | 35.0% |
| !!! | TAATGTTGGTGATCTTTTGC+AGG | - | chr8.3:79865204-79865223 | MS.gene39361:intron | 35.0% |
| AAAGCTCTATGGACCTATGA+AGG | - | chr8.3:79865589-79865608 | MS.gene39361:CDS | 40.0% | |
| AATCCCTTTGAGTGTTCTTG+AGG | - | chr8.3:79864349-79864368 | MS.gene39361:intron | 40.0% | |
| ACAAACATACCTGCATACTG+CGG | + | chr8.3:79864564-79864583 | None:intergenic | 40.0% | |
| ACAGATATTCTTGGACCAAC+TGG | + | chr8.3:79865533-79865552 | None:intergenic | 40.0% | |
| ACATTAACTATGAGAGCTCC+AGG | + | chr8.3:79865190-79865209 | None:intergenic | 40.0% | |
| ATAGATCTCCAGCACTCAAT+TGG | - | chr8.3:79864483-79864502 | MS.gene39361:intron | 40.0% | |
| CAGGACAAGAAGGATAGTAA+TGG | + | chr8.3:79865042-79865061 | None:intergenic | 40.0% | |
| CTAGTTTCTCTGTATTTGGG+AGG | + | chr8.3:79865635-79865654 | None:intergenic | 40.0% | |
| CTTCTACAAGACCATATTGG+TGG | - | chr8.3:79865118-79865137 | MS.gene39361:intron | 40.0% | |
| GAAACAAAAGCAGGTGTGAA+AGG | - | chr8.3:79864119-79864138 | MS.gene39361:CDS | 40.0% | |
| GGAGCTCTCATAGTTAATGT+TGG | - | chr8.3:79865190-79865209 | MS.gene39361:intron | 40.0% | |
| GTGCTTCTACAAGACCATAT+TGG | - | chr8.3:79865115-79865134 | MS.gene39361:intron | 40.0% | |
| TAGGGTTGTGGTTCAAATCT+GGG | - | chr8.3:79864635-79864654 | MS.gene39361:intron | 40.0% | |
| TATTCTTGGACCAACTGGAT+TGG | + | chr8.3:79865528-79865547 | None:intergenic | 40.0% | |
| TATTGCAACATGTAGGGTTG+TGG | - | chr8.3:79864623-79864642 | MS.gene39361:intron | 40.0% | |
| TGCTTTGCGTTCATTGAATG+TGG | + | chr8.3:79864093-79864112 | None:intergenic | 40.0% | |
| TGTGGAATCAAGGTTAGGTT+TGG | + | chr8.3:79864075-79864094 | None:intergenic | 40.0% | |
| TTTCGAGCAAAAGGACTAGA+TGG | - | chr8.3:79865677-79865696 | MS.gene39361:CDS | 40.0% | |
| ! | AAAGCATCCACAAAGCTCTA+TGG | - | chr8.3:79865578-79865597 | MS.gene39361:CDS | 40.0% |
| ! | AAGGAAGCATGTGAAACTTG+GGG | - | chr8.3:79864302-79864321 | MS.gene39361:intron | 40.0% |
| ! | ATTTATGCGGTCAGTTGGTA+TGG | - | chr8.3:79864599-79864618 | MS.gene39361:intron | 40.0% |
| ! | CAAGGAAGCATGTGAAACTT+GGG | - | chr8.3:79864301-79864320 | MS.gene39361:intron | 40.0% |
| ! | TAGTCCTTTTGCTCGAAAGT+AGG | + | chr8.3:79865675-79865694 | None:intergenic | 40.0% |
| ! | TCAAGGAAGCATGTGAAACT+TGG | - | chr8.3:79864300-79864319 | MS.gene39361:intron | 40.0% |
| !! | AATTCTGGTTCAGGACAAGA+AGG | + | chr8.3:79865052-79865071 | None:intergenic | 40.0% |
| !! | CATTGATTCGATTGTTGGTC+AGG | - | chr8.3:79865380-79865399 | MS.gene39361:CDS | 40.0% |
| !! | GGTCTCATTGATTCGATTGT+TGG | - | chr8.3:79865375-79865394 | MS.gene39361:CDS | 40.0% |
| ACCTCCTCAAGAACACTCAA+AGG | + | chr8.3:79864356-79864375 | None:intergenic | 45.0% | |
| AGGTGAAAGATGGAGTGAAG+AGG | - | chr8.3:79864372-79864391 | MS.gene39361:intron | 45.0% | |
| ATCTCCAGCACTCAATTGGA+GGG | - | chr8.3:79864487-79864506 | MS.gene39361:intron | 45.0% | |
| CAAACATACCTGCATACTGC+GGG | + | chr8.3:79864563-79864582 | None:intergenic | 45.0% | |
| CATACTGCGGGAAAATCTTC+TGG | + | chr8.3:79864551-79864570 | None:intergenic | 45.0% | |
| CATAGGTCCATAGAGCTTTG+TGG | + | chr8.3:79865588-79865607 | None:intergenic | 45.0% | |
| CCATCAACCAGACAAATACG+AGG | - | chr8.3:79864184-79864203 | MS.gene39361:CDS | 45.0% | |
| CCTCCTCAAGAACACTCAAA+GGG | + | chr8.3:79864355-79864374 | None:intergenic | 45.0% | |
| CCTCGTATTTGTCTGGTTGA+TGG | + | chr8.3:79864187-79864206 | None:intergenic | 45.0% | |
| CCTGAACCAGAATTGACTGT+GGG | - | chr8.3:79865058-79865077 | MS.gene39361:intron | 45.0% | |
| GAACTTGGAGACCACCAATA+TGG | + | chr8.3:79865132-79865151 | None:intergenic | 45.0% | |
| GGGAAACAGGTGATGAATCT+TGG | - | chr8.3:79864923-79864942 | MS.gene39361:intron | 45.0% | |
| GTAGGGTTGTGGTTCAAATC+TGG | - | chr8.3:79864634-79864653 | MS.gene39361:intron | 45.0% | |
| GTTCTTGAGGAGGTGAAAGA+TGG | - | chr8.3:79864362-79864381 | MS.gene39361:intron | 45.0% | |
| GTTGTTCCCACAGTCAATTC+TGG | + | chr8.3:79865067-79865086 | None:intergenic | 45.0% | |
| TCCTGAACCAGAATTGACTG+TGG | - | chr8.3:79865057-79865076 | MS.gene39361:intron | 45.0% | |
| TTGGCTTCCTCGTATTTGTC+TGG | + | chr8.3:79864194-79864213 | None:intergenic | 45.0% | |
| ! | AAGATTTTCCCGCAGTATGC+AGG | - | chr8.3:79864552-79864571 | MS.gene39361:intron | 45.0% |
| ! | AGAGTACTTGCCAATCCAGT+TGG | - | chr8.3:79865515-79865534 | MS.gene39361:CDS | 45.0% |
| ! | TGCGGGAAAATCTTCTGGTT+TGG | + | chr8.3:79864546-79864565 | None:intergenic | 45.0% |
| ! | TGTGGATGCTTTAAGTGCTG+TGG | + | chr8.3:79865570-79865589 | None:intergenic | 45.0% |
| !! | CGTATTTGTCTGGTTGATGG+TGG | + | chr8.3:79864184-79864203 | None:intergenic | 45.0% |
| !! | GCGGGAAAATCTTCTGGTTT+GGG | + | chr8.3:79864545-79864564 | None:intergenic | 45.0% |
| !! | GGAAAATCTTCTGGTTTGGG+AGG | + | chr8.3:79864542-79864561 | None:intergenic | 45.0% |
| !! | GGTTGATGGTGGAATAAGCT+TGG | + | chr8.3:79864173-79864192 | None:intergenic | 45.0% |
| !! | GTGAAAGGACTTGTTGATGC+AGG | - | chr8.3:79864134-79864153 | MS.gene39361:CDS | 45.0% |
| ACTATGAGAGCTCCAGGAAC+AGG | + | chr8.3:79865184-79865203 | None:intergenic | 50.0% | |
| CCCTTTGAGTGTTCTTGAGG+AGG | - | chr8.3:79864352-79864371 | MS.gene39361:intron | 50.0% | |
| CTATCCCTCCAATTGAGTGC+TGG | + | chr8.3:79864494-79864513 | None:intergenic | 50.0% | |
| GATCTCCAGCACTCAATTGG+AGG | - | chr8.3:79864486-79864505 | MS.gene39361:intron | 50.0% | |
| GTGGCCTACTTTCGAGCAAA+AGG | - | chr8.3:79865668-79865687 | MS.gene39361:CDS | 50.0% | |
| !! | CCCACAGTCAATTCTGGTTC+AGG | + | chr8.3:79865061-79865080 | None:intergenic | 50.0% |
| !! | TCTTCTGGTTTGGGAGGATC+AGG | + | chr8.3:79864536-79864555 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 79864053 | 79865730 | 79864053 | ID=MS.gene39361 |
| chr8.3 | mRNA | 79864053 | 79865730 | 79864053 | ID=MS.gene39361.t1;Parent=MS.gene39361 |
| chr8.3 | exon | 79865358 | 79865730 | 79865358 | ID=MS.gene39361.t1.exon1;Parent=MS.gene39361.t1 |
| chr8.3 | CDS | 79865358 | 79865730 | 79865358 | ID=cds.MS.gene39361.t1;Parent=MS.gene39361.t1 |
| chr8.3 | exon | 79864053 | 79864210 | 79864053 | ID=MS.gene39361.t1.exon2;Parent=MS.gene39361.t1 |
| chr8.3 | CDS | 79864053 | 79864210 | 79864053 | ID=cds.MS.gene39361.t1;Parent=MS.gene39361.t1 |
| Gene Sequence |
| Protein sequence |
