Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42142.t1 | PQP93279.1 | 62.6 | 219 | 57 | 4 | 37 | 231 | 549 | 766 | 4.70E-55 | 224.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42142.t1 | F4IRU3 | 38.5 | 262 | 112 | 4 | 19 | 232 | 669 | 929 | 4.5e-30 | 133.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42142.t1 | A0A314XLT2 | 62.6 | 219 | 57 | 4 | 37 | 231 | 549 | 766 | 3.4e-55 | 224.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene42142 | 0.856581 | 2.92E-62 | -1.69E-46 |
| MS.gene049343 | MS.gene42142 | 0.813514 | 2.46E-51 | -1.69E-46 |
| MS.gene049669 | MS.gene42142 | 0.815302 | 9.91E-52 | -1.69E-46 |
| MS.gene049821 | MS.gene42142 | 0.811874 | 5.63E-51 | -1.69E-46 |
| MS.gene049977 | MS.gene42142 | 0.816732 | 4.75E-52 | -1.69E-46 |
| MS.gene050026 | MS.gene42142 | 0.82215 | 2.76E-53 | -1.69E-46 |
| MS.gene050201 | MS.gene42142 | 0.817922 | 2.57E-52 | -1.69E-46 |
| MS.gene050237 | MS.gene42142 | 0.812733 | 3.65E-51 | -1.69E-46 |
| MS.gene050559 | MS.gene42142 | 0.812117 | 4.98E-51 | -1.69E-46 |
| MS.gene050561 | MS.gene42142 | 0.809519 | 1.82E-50 | -1.69E-46 |
| MS.gene050750 | MS.gene42142 | 0.812051 | 5.15E-51 | -1.69E-46 |
| MS.gene050780 | MS.gene42142 | 0.805134 | 1.55E-49 | -1.69E-46 |
| MS.gene050953 | MS.gene42142 | 0.807243 | 5.56E-50 | -1.69E-46 |
| MS.gene051247 | MS.gene42142 | 0.812513 | 4.08E-51 | -1.69E-46 |
| MS.gene051279 | MS.gene42142 | 0.823172 | 1.60E-53 | -1.69E-46 |
| MS.gene051332 | MS.gene42142 | 0.814892 | 1.22E-51 | -1.69E-46 |
| MS.gene051492 | MS.gene42142 | 0.809364 | 1.96E-50 | -1.69E-46 |
| MS.gene051594 | MS.gene42142 | 0.822152 | 2.76E-53 | -1.69E-46 |
| MS.gene051744 | MS.gene42142 | 0.827436 | 1.57E-54 | -1.69E-46 |
| MS.gene051957 | MS.gene42142 | 0.801277 | 9.72E-49 | -1.69E-46 |
| MS.gene052108 | MS.gene42142 | 0.817791 | 2.74E-52 | -1.69E-46 |
| MS.gene052239 | MS.gene42142 | -0.822942 | 1.81E-53 | -1.69E-46 |
| MS.gene052358 | MS.gene42142 | -0.804853 | 1.77E-49 | -1.69E-46 |
| MS.gene052447 | MS.gene42142 | 0.84249 | 2.51E-58 | -1.69E-46 |
| MS.gene052519 | MS.gene42142 | 0.831693 | 1.44E-55 | -1.69E-46 |
| MS.gene052534 | MS.gene42142 | 0.808897 | 2.47E-50 | -1.69E-46 |
| MS.gene052582 | MS.gene42142 | 0.842321 | 2.78E-58 | -1.69E-46 |
| MS.gene052584 | MS.gene42142 | 0.84667 | 1.88E-59 | -1.69E-46 |
| MS.gene052586 | MS.gene42142 | 0.826498 | 2.63E-54 | -1.69E-46 |
| MS.gene052673 | MS.gene42142 | -0.804845 | 1.78E-49 | -1.69E-46 |
| MS.gene052685 | MS.gene42142 | 0.80278 | 4.77E-49 | -1.69E-46 |
| MS.gene052773 | MS.gene42142 | 0.823651 | 1.23E-53 | -1.69E-46 |
| MS.gene053006 | MS.gene42142 | 0.803674 | 3.11E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene42142 | 0.821147 | 4.71E-53 | -1.69E-46 |
| MS.gene053321 | MS.gene42142 | 0.800491 | 1.41E-48 | -1.69E-46 |
| MS.gene053396 | MS.gene42142 | 0.828675 | 7.88E-55 | -1.69E-46 |
| MS.gene05410 | MS.gene42142 | 0.80875 | 2.66E-50 | -1.69E-46 |
| MS.gene05414 | MS.gene42142 | 0.81232 | 4.50E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene42142 | 0.850757 | 1.38E-60 | -1.69E-46 |
| MS.gene054222 | MS.gene42142 | 0.828515 | 8.61E-55 | -1.69E-46 |
| MS.gene05423 | MS.gene42142 | 0.849422 | 3.27E-60 | -1.69E-46 |
| MS.gene054291 | MS.gene42142 | -0.842257 | 2.89E-58 | -1.69E-46 |
| MS.gene054468 | MS.gene42142 | 0.800864 | 1.18E-48 | -1.69E-46 |
| MS.gene054576 | MS.gene42142 | 0.836687 | 8.09E-57 | -1.69E-46 |
| MS.gene054651 | MS.gene42142 | 0.819444 | 1.16E-52 | -1.69E-46 |
| MS.gene054991 | MS.gene42142 | 0.825875 | 3.69E-54 | -1.69E-46 |
| MS.gene055227 | MS.gene42142 | 0.807133 | 5.86E-50 | -1.69E-46 |
| MS.gene055228 | MS.gene42142 | 0.804538 | 2.06E-49 | -1.69E-46 |
| MS.gene055586 | MS.gene42142 | 0.800794 | 1.22E-48 | -1.69E-46 |
| MS.gene055724 | MS.gene42142 | 0.808433 | 3.11E-50 | -1.69E-46 |
| MS.gene055778 | MS.gene42142 | 0.807393 | 5.17E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene42142 | 0.827068 | 1.92E-54 | -1.69E-46 |
| MS.gene055841 | MS.gene42142 | 0.814126 | 1.81E-51 | -1.69E-46 |
| MS.gene056050 | MS.gene42142 | 0.813861 | 2.07E-51 | -1.69E-46 |
| MS.gene056162 | MS.gene42142 | 0.811427 | 7.04E-51 | -1.69E-46 |
| MS.gene056174 | MS.gene42142 | 0.821899 | 3.16E-53 | -1.69E-46 |
| MS.gene056272 | MS.gene42142 | 0.8488 | 4.87E-60 | -1.69E-46 |
| MS.gene056366 | MS.gene42142 | 0.821351 | 4.23E-53 | -1.69E-46 |
| MS.gene056776 | MS.gene42142 | 0.819342 | 1.22E-52 | -1.69E-46 |
| MS.gene056779 | MS.gene42142 | 0.822521 | 2.27E-53 | -1.69E-46 |
| MS.gene057021 | MS.gene42142 | 0.823193 | 1.58E-53 | -1.69E-46 |
| MS.gene057026 | MS.gene42142 | 0.822195 | 2.70E-53 | -1.69E-46 |
| MS.gene057208 | MS.gene42142 | 0.838293 | 3.13E-57 | -1.69E-46 |
| MS.gene057414 | MS.gene42142 | 0.819602 | 1.07E-52 | -1.69E-46 |
| MS.gene057598 | MS.gene42142 | 0.825115 | 5.59E-54 | -1.69E-46 |
| MS.gene057611 | MS.gene42142 | 0.803391 | 3.57E-49 | -1.69E-46 |
| MS.gene058037 | MS.gene42142 | 0.816125 | 6.50E-52 | -1.69E-46 |
| MS.gene058279 | MS.gene42142 | 0.824615 | 7.33E-54 | -1.69E-46 |
| MS.gene058294 | MS.gene42142 | 0.813279 | 2.77E-51 | -1.69E-46 |
| MS.gene058625 | MS.gene42142 | 0.837664 | 4.55E-57 | -1.69E-46 |
| MS.gene058636 | MS.gene42142 | 0.800737 | 1.25E-48 | -1.69E-46 |
| MS.gene058829 | MS.gene42142 | 0.803772 | 2.97E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene42142 | 0.811947 | 5.43E-51 | -1.69E-46 |
| MS.gene059460 | MS.gene42142 | 0.801822 | 7.51E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene42142 | 0.8103 | 1.23E-50 | -1.69E-46 |
| MS.gene059584 | MS.gene42142 | 0.838735 | 2.41E-57 | -1.69E-46 |
| MS.gene059625 | MS.gene42142 | 0.809439 | 1.89E-50 | -1.69E-46 |
| MS.gene060134 | MS.gene42142 | 0.804023 | 2.64E-49 | -1.69E-46 |
| MS.gene060365 | MS.gene42142 | 0.843772 | 1.14E-58 | -1.69E-46 |
| MS.gene060373 | MS.gene42142 | 0.83355 | 5.00E-56 | -1.69E-46 |
| MS.gene060521 | MS.gene42142 | 0.84676 | 1.77E-59 | -1.69E-46 |
| MS.gene060572 | MS.gene42142 | 0.822379 | 2.44E-53 | -1.69E-46 |
| MS.gene060634 | MS.gene42142 | -0.841816 | 3.78E-58 | -1.69E-46 |
| MS.gene060879 | MS.gene42142 | 0.816312 | 5.90E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42142.t1 | MTR_7g115430 | 81.081 | 296 | 14 | 3 | 34 | 288 | 692 | 986 | 7.31e-144 | 441 |
| MS.gene42142.t1 | MTR_1g080600 | 55.556 | 324 | 69 | 3 | 39 | 288 | 696 | 1018 | 8.16e-96 | 305 |
| MS.gene42142.t1 | MTR_4g125690 | 49.843 | 319 | 110 | 4 | 19 | 288 | 669 | 986 | 1.05e-80 | 266 |
| MS.gene42142.t1 | MTR_2g062660 | 48.232 | 311 | 110 | 6 | 19 | 281 | 652 | 959 | 2.07e-78 | 259 |
| MS.gene42142.t1 | MTR_1g069290 | 41.875 | 320 | 131 | 7 | 19 | 288 | 171 | 485 | 6.89e-60 | 206 |
| MS.gene42142.t1 | MTR_7g099290 | 40.125 | 319 | 138 | 7 | 19 | 288 | 670 | 984 | 9.15e-56 | 194 |
| MS.gene42142.t1 | MTR_3g105200 | 36.806 | 288 | 130 | 5 | 19 | 257 | 667 | 951 | 6.83e-41 | 151 |
| MS.gene42142.t1 | MTR_3g105200 | 36.806 | 288 | 130 | 5 | 19 | 257 | 667 | 951 | 6.89e-41 | 151 |
| MS.gene42142.t1 | MTR_1g037500 | 38.206 | 301 | 134 | 9 | 32 | 288 | 688 | 980 | 4.24e-39 | 146 |
| MS.gene42142.t1 | MTR_1g070280 | 34.737 | 285 | 152 | 7 | 34 | 289 | 503 | 782 | 1.41e-37 | 141 |
| MS.gene42142.t1 | MTR_1g070280 | 35.106 | 282 | 155 | 7 | 34 | 289 | 693 | 972 | 2.03e-37 | 141 |
| MS.gene42142.t1 | MTR_1g070280 | 35.106 | 282 | 155 | 7 | 34 | 289 | 693 | 972 | 2.17e-37 | 141 |
| MS.gene42142.t1 | MTR_1g070280 | 34.737 | 285 | 152 | 7 | 34 | 289 | 693 | 972 | 2.54e-37 | 141 |
| MS.gene42142.t1 | MTR_1g015620 | 32.841 | 271 | 132 | 4 | 19 | 240 | 662 | 931 | 1.43e-34 | 133 |
| MS.gene42142.t1 | MTR_1g070400 | 34.701 | 268 | 149 | 7 | 34 | 284 | 689 | 947 | 5.19e-34 | 131 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42142.t1 | AT1G54560 | 56.949 | 295 | 85 | 3 | 35 | 288 | 693 | 986 | 5.69e-91 | 295 |
| MS.gene42142.t1 | AT1G54560 | 56.949 | 295 | 85 | 3 | 35 | 288 | 696 | 989 | 6.44e-91 | 295 |
| MS.gene42142.t1 | AT1G08730 | 53.583 | 321 | 99 | 5 | 10 | 289 | 684 | 995 | 7.12e-86 | 281 |
| MS.gene42142.t1 | AT1G08730 | 53.583 | 321 | 99 | 5 | 10 | 289 | 676 | 987 | 8.40e-86 | 280 |
| MS.gene42142.t1 | AT5G20490 | 50.157 | 319 | 109 | 5 | 19 | 288 | 603 | 920 | 1.90e-82 | 271 |
| MS.gene42142.t1 | AT5G20490 | 50.157 | 319 | 109 | 5 | 19 | 288 | 669 | 986 | 2.19e-82 | 271 |
| MS.gene42142.t1 | AT5G20490 | 50.157 | 319 | 109 | 5 | 19 | 288 | 668 | 985 | 2.84e-82 | 270 |
| MS.gene42142.t1 | AT2G31900 | 46.769 | 325 | 117 | 6 | 19 | 290 | 411 | 732 | 1.06e-77 | 257 |
| MS.gene42142.t1 | AT2G31900 | 46.769 | 325 | 117 | 6 | 19 | 290 | 554 | 875 | 1.78e-77 | 256 |
| MS.gene42142.t1 | AT2G31900 | 46.769 | 325 | 117 | 6 | 19 | 290 | 669 | 990 | 1.99e-77 | 256 |
| MS.gene42142.t1 | AT2G31900 | 46.769 | 325 | 117 | 6 | 19 | 290 | 669 | 990 | 2.05e-77 | 256 |
| MS.gene42142.t1 | AT2G31900 | 46.769 | 325 | 117 | 6 | 19 | 290 | 669 | 990 | 2.05e-77 | 256 |
| MS.gene42142.t1 | AT5G43900 | 46.233 | 292 | 112 | 5 | 38 | 288 | 695 | 982 | 6.91e-67 | 226 |
| MS.gene42142.t1 | AT5G43900 | 46.233 | 292 | 112 | 5 | 38 | 288 | 752 | 1039 | 7.30e-67 | 226 |
| MS.gene42142.t1 | AT5G43900 | 46.233 | 292 | 112 | 5 | 38 | 288 | 755 | 1042 | 9.03e-67 | 226 |
| MS.gene42142.t1 | AT1G04160 | 42.320 | 319 | 131 | 7 | 19 | 288 | 669 | 983 | 2.77e-65 | 221 |
| MS.gene42142.t1 | AT1G04160 | 42.320 | 319 | 131 | 7 | 19 | 288 | 669 | 983 | 3.91e-65 | 221 |
| MS.gene42142.t1 | AT1G17580 | 43.730 | 311 | 124 | 6 | 27 | 288 | 674 | 982 | 2.67e-64 | 219 |
| MS.gene42142.t1 | AT4G28710 | 41.781 | 292 | 125 | 5 | 38 | 288 | 702 | 989 | 2.24e-56 | 196 |
| MS.gene42142.t1 | AT2G20290 | 40.187 | 321 | 131 | 9 | 19 | 288 | 667 | 977 | 5.41e-47 | 169 |
| MS.gene42142.t1 | AT2G20290 | 40.187 | 321 | 131 | 9 | 19 | 288 | 678 | 988 | 5.74e-47 | 169 |
| MS.gene42142.t1 | AT2G20290 | 40.187 | 321 | 131 | 9 | 19 | 288 | 667 | 977 | 5.96e-47 | 169 |
| MS.gene42142.t1 | AT2G20290 | 40.187 | 321 | 131 | 9 | 19 | 288 | 667 | 977 | 6.56e-47 | 169 |
| MS.gene42142.t1 | AT1G04600 | 37.380 | 313 | 132 | 5 | 39 | 288 | 696 | 1007 | 1.97e-46 | 167 |
| MS.gene42142.t1 | AT2G33240 | 42.623 | 244 | 98 | 3 | 39 | 241 | 186 | 428 | 2.86e-46 | 167 |
| MS.gene42142.t1 | AT2G33240 | 42.623 | 244 | 98 | 3 | 39 | 241 | 713 | 955 | 3.87e-46 | 166 |
| MS.gene42142.t1 | AT2G33240 | 42.623 | 244 | 98 | 3 | 39 | 241 | 713 | 955 | 4.09e-46 | 166 |
| MS.gene42142.t1 | AT2G33240 | 42.623 | 244 | 98 | 3 | 39 | 241 | 713 | 955 | 4.09e-46 | 166 |
| MS.gene42142.t1 | AT2G33240 | 42.623 | 244 | 98 | 3 | 39 | 241 | 713 | 955 | 4.25e-46 | 166 |
| MS.gene42142.t1 | AT2G33240 | 42.623 | 244 | 98 | 3 | 39 | 241 | 713 | 955 | 4.26e-46 | 166 |
| MS.gene42142.t1 | AT2G33240 | 42.623 | 244 | 98 | 3 | 39 | 241 | 718 | 960 | 4.30e-46 | 166 |
| MS.gene42142.t1 | AT2G33240 | 42.623 | 244 | 98 | 3 | 39 | 241 | 695 | 937 | 4.63e-46 | 166 |
| MS.gene42142.t1 | AT4G33200 | 37.638 | 271 | 119 | 4 | 19 | 240 | 674 | 943 | 5.67e-43 | 157 |
| MS.gene42142.t1 | AT4G33200 | 37.638 | 271 | 119 | 4 | 19 | 240 | 674 | 943 | 7.12e-43 | 157 |
| MS.gene42142.t1 | AT4G33200 | 37.638 | 271 | 119 | 4 | 19 | 240 | 674 | 943 | 7.15e-43 | 157 |
| MS.gene42142.t1 | AT4G33200 | 37.638 | 271 | 119 | 4 | 19 | 240 | 674 | 943 | 7.72e-43 | 157 |
| MS.gene42142.t1 | AT3G58160 | 51.007 | 149 | 72 | 1 | 35 | 183 | 690 | 837 | 1.05e-38 | 145 |
| MS.gene42142.t1 | AT3G58160 | 51.007 | 149 | 72 | 1 | 35 | 183 | 690 | 837 | 1.05e-38 | 145 |
| MS.gene42142.t1 | AT3G58160 | 51.007 | 149 | 72 | 1 | 35 | 183 | 690 | 837 | 1.15e-38 | 145 |
| MS.gene42142.t1 | AT3G58160 | 51.007 | 149 | 72 | 1 | 35 | 183 | 690 | 837 | 1.42e-38 | 144 |
| MS.gene42142.t1 | AT3G58160 | 51.007 | 149 | 72 | 1 | 35 | 183 | 690 | 837 | 1.42e-38 | 144 |
| MS.gene42142.t1 | AT5G20470 | 63.551 | 107 | 38 | 1 | 183 | 288 | 99 | 205 | 1.08e-31 | 124 |
| MS.gene42142.t1 | AT1G60650 | 56.604 | 53 | 21 | 1 | 2 | 54 | 7 | 57 | 1.67e-11 | 63.9 |
| MS.gene42142.t1 | AT1G60650 | 56.604 | 53 | 21 | 1 | 2 | 54 | 7 | 57 | 1.67e-11 | 63.9 |
Find 63 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAGCTTCCACCATTATTC+AGG | 0.254426 | 7.3:+34131279 | MS.gene42142:CDS |
| ATTTGTTGGTGGATTGGGTT+GGG | 0.282263 | 7.3:+34129882 | MS.gene42142:CDS |
| AGCAGAAGTTGAGAGTTTAA+AGG | 0.297990 | 7.3:+34132454 | MS.gene42142:CDS |
| TGCTTTAGATTCTTCTAGAT+TGG | 0.299225 | 7.3:-34132255 | None:intergenic |
| CTGAATAATGGTGGAAGCTT+TGG | 0.335654 | 7.3:-34131278 | None:intergenic |
| CCGAAATTGGAAGCAATGTC+TGG | 0.337881 | 7.3:+34129841 | None:intergenic |
| ACCTGGGTCTCTTGAATAAC+AGG | 0.348834 | 7.3:-34132395 | None:intergenic |
| CCATAGAGACTGTACGTATA+TGG | 0.352757 | 7.3:-34130885 | None:intergenic |
| TCGAATATTTGTTGGTGGAT+TGG | 0.355149 | 7.3:+34129876 | MS.gene42142:CDS |
| CCATATACGTACAGTCTCTA+TGG | 0.356820 | 7.3:+34130885 | MS.gene42142:CDS |
| ATAATGTCTACCAGCCTGAT+AGG | 0.362751 | 7.3:-34130843 | None:intergenic |
| CGAATATTTGTTGGTGGATT+GGG | 0.369450 | 7.3:+34129877 | MS.gene42142:CDS |
| CTTTAGGCTTCAAGAGAAAC+TGG | 0.373193 | 7.3:+34131960 | MS.gene42142:intron |
| TCCTATAACTGAACTCCTTA+CGG | 0.390023 | 7.3:-34131249 | None:intergenic |
| GTCAACTATAACCTGAATAA+TGG | 0.390064 | 7.3:-34131290 | None:intergenic |
| GATGGGGCCTAAAGGATATC+AGG | 0.395252 | 7.3:+34130491 | MS.gene42142:CDS |
| TGATGCATGGAGTTTATTGT+AGG | 0.402225 | 7.3:-34131188 | None:intergenic |
| CCTATAACTGAACTCCTTAC+GGG | 0.405516 | 7.3:-34131248 | None:intergenic |
| CTCTCGCTCCTTTGCAAGCA+TGG | 0.410248 | 7.3:-34132342 | None:intergenic |
| GAAGAAAATCGAATATTTGT+TGG | 0.413061 | 7.3:+34129868 | MS.gene42142:CDS |
| TGGATTGGGTTGGGATGTTA+CGG | 0.424965 | 7.3:+34129891 | MS.gene42142:CDS |
| TACTTTGCAAACAGCTTTGA+GGG | 0.426778 | 7.3:+34131216 | MS.gene42142:CDS |
| AACAGGAGGTGCTTCTTCAA+TGG | 0.434920 | 7.3:-34132378 | None:intergenic |
| CAAAGTACCTGATATCCTTT+AGG | 0.437126 | 7.3:-34130498 | None:intergenic |
| GTGTGTACGAATTCCCTATC+AGG | 0.438040 | 7.3:+34130829 | MS.gene42142:CDS |
| CCATAAGATTCTAGAAAAGA+TGG | 0.440344 | 7.3:+34130473 | MS.gene42142:CDS |
| CACTTGGTACTTGAGCTCTC+CGG | 0.449927 | 7.3:-34130784 | None:intergenic |
| TTACTTTGCAAACAGCTTTG+AGG | 0.458491 | 7.3:+34131215 | MS.gene42142:CDS |
| CTTTGCTCTGCATATCCTGC+AGG | 0.464178 | 7.3:-34132304 | None:intergenic |
| CCCGTAAGGAGTTCAGTTAT+AGG | 0.478980 | 7.3:+34131248 | MS.gene42142:CDS |
| CTAGAAAAGATGGGGCCTAA+AGG | 0.487407 | 7.3:+34130483 | MS.gene42142:CDS |
| GAAAATCGAATATTTGTTGG+TGG | 0.498286 | 7.3:+34129871 | MS.gene42142:CDS |
| TATTTGTTGGTGGATTGGGT+TGG | 0.502918 | 7.3:+34129881 | MS.gene42142:CDS |
| ATTGGTTAGCTGAAACAAGT+TGG | 0.504414 | 7.3:+34132625 | MS.gene42142:intron |
| ACTTGGTACTTGAGCTCTCC+GGG | 0.509636 | 7.3:-34130783 | None:intergenic |
| CGGCAAAATTCTCGAATGCC+AGG | 0.513653 | 7.3:+34129945 | MS.gene42142:CDS |
| GTGTGTCTTCAACAATAACC+TGG | 0.522981 | 7.3:-34132412 | None:intergenic |
| ACAAAGGTATTTCTAAGAGC+AGG | 0.533524 | 7.3:+34130740 | MS.gene42142:CDS |
| AGGAGTTCAGTTATAGGAAA+CGG | 0.535850 | 7.3:+34131254 | MS.gene42142:CDS |
| CATAAGATTCTAGAAAAGAT+GGG | 0.547288 | 7.3:+34130474 | MS.gene42142:CDS |
| GAGGGCAATCGCTGCCCGTA+AGG | 0.548069 | 7.3:+34131234 | MS.gene42142:CDS |
| AGATGGCTGAATTAGATGCC+CGG | 0.549108 | 7.3:+34130765 | MS.gene42142:CDS |
| AACTTTATCAGAACATGAGA+AGG | 0.556888 | 7.3:+34131110 | MS.gene42142:CDS |
| TAATGTCTACCAGCCTGATA+GGG | 0.566067 | 7.3:-34130842 | None:intergenic |
| TTTGTAGATTGGGAAAACAA+AGG | 0.579952 | 7.3:+34130724 | MS.gene42142:intron |
| TCCTGTTATTCAAGAGACCC+AGG | 0.583194 | 7.3:+34132394 | MS.gene42142:CDS |
| AACTATAACCTGAATAATGG+TGG | 0.583399 | 7.3:-34131287 | None:intergenic |
| TGGTGCACTTAAAGAAGCAA+AGG | 0.584874 | 7.3:+34131980 | MS.gene42142:CDS |
| AAAACTGCAGAACTCCCTGC+AGG | 0.585169 | 7.3:+34132289 | MS.gene42142:CDS |
| ATTTCTAAGAGCAGGTCAGA+TGG | 0.591274 | 7.3:+34130748 | MS.gene42142:CDS |
| AATCACTTCCATGCTTGCAA+AGG | 0.596753 | 7.3:+34132334 | MS.gene42142:CDS |
| AGGGAATTCGTACACACCGT+TGG | 0.604417 | 7.3:-34130823 | None:intergenic |
| GCAAAGTAAGCACTGATGCA+TGG | 0.607026 | 7.3:-34131201 | None:intergenic |
| TATTGTTGAAGACACACAGA+AGG | 0.615421 | 7.3:+34132418 | MS.gene42142:CDS |
| TTTGCTCTGCATATCCTGCA+GGG | 0.636069 | 7.3:-34132303 | None:intergenic |
| GTACGAATTCCCTATCAGGC+TGG | 0.642998 | 7.3:+34130833 | MS.gene42142:CDS |
| TACGTACAGTCTCTATGGAG+AGG | 0.649853 | 7.3:+34130890 | MS.gene42142:CDS |
| TGTGTCTTCAACAATAACCT+GGG | 0.649976 | 7.3:-34132411 | None:intergenic |
| ATAAGATTCTAGAAAAGATG+GGG | 0.653430 | 7.3:+34130475 | MS.gene42142:CDS |
| ACTTTATCAGAACATGAGAA+GGG | 0.658995 | 7.3:+34131111 | MS.gene42142:CDS |
| TTATCAGAACATGAGAAGGG+AGG | 0.685239 | 7.3:+34131114 | MS.gene42142:CDS |
| TGGGTCTCTTGAATAACAGG+AGG | 0.686984 | 7.3:-34132392 | None:intergenic |
| ACATACGCAGATATGAATCG+AGG | 0.715759 | 7.3:+34131161 | MS.gene42142:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACAAAAGAATATATATTG+TGG | - | chr7.3:34131789-34131808 | None:intergenic | 15.0% |
| !! | CAAAAATCAATAATAAGAAA+AGG | - | chr7.3:34131895-34131914 | None:intergenic | 15.0% |
| !! | TTATTAGCATAAAAATGTTA+AGG | - | chr7.3:34130628-34130647 | None:intergenic | 15.0% |
| !!! | AATATATATTCTTTTGTTTG+TGG | + | chr7.3:34131790-34131809 | MS.gene42142:intron | 15.0% |
| !!! | AGAATTTTATTTTTCTGAAT+GGG | + | chr7.3:34130068-34130087 | MS.gene42142:intron | 15.0% |
| !!! | TAACATTTTTATGCTAATAA+GGG | + | chr7.3:34130628-34130647 | MS.gene42142:intron | 15.0% |
| !!! | TTAACATTTTTATGCTAATA+AGG | + | chr7.3:34130627-34130646 | MS.gene42142:intron | 15.0% |
| !! | AAAATAAGTAAAAGGAAAGA+AGG | - | chr7.3:34131045-34131064 | None:intergenic | 20.0% |
| !! | AATAGCATAAATCAATTGTT+TGG | + | chr7.3:34130939-34130958 | MS.gene42142:intron | 20.0% |
| !! | ATAATAAAACAAAACAAAGC+TGG | - | chr7.3:34130176-34130195 | None:intergenic | 20.0% |
| !! | GAAATTGGAAAATAAGTAAA+AGG | - | chr7.3:34131053-34131072 | None:intergenic | 20.0% |
| !! | TAAATCAATTGTTTGGATAT+AGG | + | chr7.3:34130946-34130965 | MS.gene42142:intron | 20.0% |
| !! | TAAGAACTAAAGAAACTATA+TGG | + | chr7.3:34132221-34132240 | MS.gene42142:intron | 20.0% |
| !! | TATTAAACAATGAATCGTAA+AGG | - | chr7.3:34131852-34131871 | None:intergenic | 20.0% |
| !! | TCTAATGACTAATCTTAAAT+TGG | + | chr7.3:34131575-34131594 | MS.gene42142:intron | 20.0% |
| !! | TTACATGAAAACTTCAAAAA+TGG | - | chr7.3:34130152-34130171 | None:intergenic | 20.0% |
| !! | TTTGGCAGTTATATAAAATA+TGG | + | chr7.3:34132074-34132093 | MS.gene42142:intron | 20.0% |
| !! | TTTGTAAAATTGCACAAATT+GGG | + | chr7.3:34132135-34132154 | MS.gene42142:intron | 20.0% |
| !!! | AATTTAAGATTAGTCATTAG+AGG | - | chr7.3:34131576-34131595 | None:intergenic | 20.0% |
| !!! | GAGAATTTTATTTTTCTGAA+TGG | + | chr7.3:34130067-34130086 | MS.gene42142:intron | 20.0% |
| !!! | TTTAGTTCTTACAAAATAAG+AGG | - | chr7.3:34132212-34132231 | None:intergenic | 20.0% |
| !!! | TTTTGTAAAATTGCACAAAT+TGG | + | chr7.3:34132134-34132153 | MS.gene42142:intron | 20.0% |
| ! | AATTGAAACAAATGGTTTGA+AGG | - | chr7.3:34129981-34130000 | None:intergenic | 25.0% |
| ! | ACAAATTGGGAATAAAAACA+AGG | + | chr7.3:34132148-34132167 | MS.gene42142:intron | 25.0% |
| ! | ACATATTACACATGTGAAAT+TGG | - | chr7.3:34131068-34131087 | None:intergenic | 25.0% |
| ! | ACATGTGTAATATGTTATGT+AGG | + | chr7.3:34131073-34131092 | MS.gene42142:intron | 25.0% |
| ! | ATTGAAACAAATGGTTTGAA+GGG | - | chr7.3:34129980-34129999 | None:intergenic | 25.0% |
| ! | CCAACTAGAAAAAAGTTTAA+GGG | + | chr7.3:34132040-34132059 | MS.gene42142:CDS | 25.0% |
| ! | GAAGAAAATCGAATATTTGT+TGG | + | chr7.3:34129868-34129887 | MS.gene42142:CDS | 25.0% |
| ! | TATTATAAAAGGCTGAAGAA+AGG | + | chr7.3:34131413-34131432 | MS.gene42142:intron | 25.0% |
| ! | TCCAACTAGAAAAAAGTTTA+AGG | + | chr7.3:34132039-34132058 | MS.gene42142:CDS | 25.0% |
| ! | TTACAAAATAAGAGGATACT+TGG | - | chr7.3:34132204-34132223 | None:intergenic | 25.0% |
| ! | TTCTTTGTAATTTCTATGCT+CGG | - | chr7.3:34130383-34130402 | None:intergenic | 25.0% |
| !! | AAATTCAGCTTTTATCACAA+TGG | + | chr7.3:34130268-34130287 | MS.gene42142:intron | 25.0% |
| !! | AATTCTCTCTGAAAAATTTC+AGG | + | chr7.3:34131361-34131380 | MS.gene42142:intron | 25.0% |
| !! | ACCTTTTCTTAAAACTGTTA+AGG | + | chr7.3:34130338-34130357 | MS.gene42142:intron | 25.0% |
| !! | ATAAGATTCTAGAAAAGATG+GGG | + | chr7.3:34130475-34130494 | MS.gene42142:CDS | 25.0% |
| !! | CATAAGATTCTAGAAAAGAT+GGG | + | chr7.3:34130474-34130493 | MS.gene42142:CDS | 25.0% |
| !! | TAGTTGACTCATGTAAAATT+AGG | + | chr7.3:34131305-34131324 | MS.gene42142:intron | 25.0% |
| !! | TATAAAGAAAGCAAAGCTTT+TGG | - | chr7.3:34131624-34131643 | None:intergenic | 25.0% |
| !! | TGTTTTACAATTAAGCTATG+AGG | - | chr7.3:34131670-34131689 | None:intergenic | 25.0% |
| !!! | ACCTTAACAGTTTTAAGAAA+AGG | - | chr7.3:34130342-34130361 | None:intergenic | 25.0% |
| !!! | CATTGATTTGTATGCTTATT+GGG | + | chr7.3:34132593-34132612 | MS.gene42142:intron | 25.0% |
| !!! | TCATTGATTTGTATGCTTAT+TGG | + | chr7.3:34132592-34132611 | MS.gene42142:intron | 25.0% |
| !!! | TTAAACTTTTTTCTAGTTGG+AGG | - | chr7.3:34132040-34132059 | None:intergenic | 25.0% |
| !!! | TTTTATTTTTCTGAATGGGT+TGG | + | chr7.3:34130072-34130091 | MS.gene42142:intron | 25.0% |
| AACTATAACCTGAATAATGG+TGG | - | chr7.3:34131290-34131309 | None:intergenic | 30.0% | |
| AACTTTATCAGAACATGAGA+AGG | + | chr7.3:34131110-34131129 | MS.gene42142:CDS | 30.0% | |
| ACGCTTCCTCATATTATAAA+AGG | + | chr7.3:34131402-34131421 | MS.gene42142:intron | 30.0% | |
| ACTTTATCAGAACATGAGAA+GGG | + | chr7.3:34131111-34131130 | MS.gene42142:CDS | 30.0% | |
| ATGCTAATAAGGGTAGTTTA+TGG | + | chr7.3:34130638-34130657 | MS.gene42142:intron | 30.0% | |
| CAGTTAACAAGCATTATACA+TGG | - | chr7.3:34132512-34132531 | None:intergenic | 30.0% | |
| CATGACCAAATTCATTTGAT+TGG | + | chr7.3:34130693-34130712 | MS.gene42142:intron | 30.0% | |
| GAAAAAACACATTAGTTAGG+TGG | - | chr7.3:34130420-34130439 | None:intergenic | 30.0% | |
| GAGAAACACTGTTGTATTTA+GGG | - | chr7.3:34130991-34131010 | None:intergenic | 30.0% | |
| GATATAGGTGCAATATTGTA+TGG | + | chr7.3:34130961-34130980 | MS.gene42142:intron | 30.0% | |
| GGATTTAACCTGTCAATAAT+TGG | + | chr7.3:34131596-34131615 | MS.gene42142:intron | 30.0% | |
| GGCAGTTATATAAAATATGG+AGG | + | chr7.3:34132077-34132096 | MS.gene42142:intron | 30.0% | |
| GGTGAAAAAACACATTAGTT+AGG | - | chr7.3:34130423-34130442 | None:intergenic | 30.0% | |
| GTCAACTATAACCTGAATAA+TGG | - | chr7.3:34131293-34131312 | None:intergenic | 30.0% | |
| TGAGAAACACTGTTGTATTT+AGG | - | chr7.3:34130992-34131011 | None:intergenic | 30.0% | |
| TTGCTGAGAATTGAAACAAA+TGG | - | chr7.3:34129989-34130008 | None:intergenic | 30.0% | |
| TTGTAGTAATTGTTGTCACA+GGG | + | chr7.3:34130045-34130064 | MS.gene42142:intron | 30.0% | |
| TTTGTAGATTGGGAAAACAA+AGG | + | chr7.3:34130724-34130743 | MS.gene42142:intron | 30.0% | |
| ! | ATGCATTACTTACCATTTTC+AGG | - | chr7.3:34131496-34131515 | None:intergenic | 30.0% |
| ! | CCATAAGATTCTAGAAAAGA+TGG | + | chr7.3:34130473-34130492 | MS.gene42142:CDS | 30.0% |
| ! | CTTCAGCCTTTTATAATATG+AGG | - | chr7.3:34131411-34131430 | None:intergenic | 30.0% |
| ! | GAAAATCGAATATTTGTTGG+TGG | + | chr7.3:34129871-34129890 | MS.gene42142:CDS | 30.0% |
| ! | TGCTTTAGATTCTTCTAGAT+TGG | - | chr7.3:34132258-34132277 | None:intergenic | 30.0% |
| ! | TGTTTTCCCAATCTACAAAA+TGG | - | chr7.3:34130723-34130742 | None:intergenic | 30.0% |
| ! | TTTTGGATCCAATTATTGAC+AGG | - | chr7.3:34131607-34131626 | None:intergenic | 30.0% |
| !! | TTCTTTTGTTTGTGGCTATA+TGG | + | chr7.3:34131798-34131817 | MS.gene42142:intron | 30.0% |
| !!! | CCATCTTTTCTAGAATCTTA+TGG | - | chr7.3:34130476-34130495 | None:intergenic | 30.0% |
| !!! | CCCTTAAACTTTTTTCTAGT+TGG | - | chr7.3:34132043-34132062 | None:intergenic | 30.0% |
| !!! | CTAATGTGTTTTTTCACCTA+TGG | + | chr7.3:34130425-34130444 | MS.gene42142:intron | 30.0% |
| AACATAACTCTGGTCATTCA+AGG | + | chr7.3:34131522-34131541 | MS.gene42142:intron | 35.0% | |
| AGCAGAAGTTGAGAGTTTAA+AGG | + | chr7.3:34132454-34132473 | MS.gene42142:CDS | 35.0% | |
| AGGAGTTCAGTTATAGGAAA+CGG | + | chr7.3:34131254-34131273 | MS.gene42142:CDS | 35.0% | |
| ATGAATGTCAACGAAGCATA+TGG | - | chr7.3:34130676-34130695 | None:intergenic | 35.0% | |
| GACAGCCAATCAAATGAATT+TGG | - | chr7.3:34130701-34130720 | None:intergenic | 35.0% | |
| GATGTAAGATCCATGAATTG+TGG | - | chr7.3:34130585-34130604 | None:intergenic | 35.0% | |
| GTTGTAGTAATTGTTGTCAC+AGG | + | chr7.3:34130044-34130063 | MS.gene42142:intron | 35.0% | |
| TAGCAGCAAAAACTATCCAA+CGG | + | chr7.3:34130807-34130826 | MS.gene42142:CDS | 35.0% | |
| TATCTGTTTCCATGTGCTTT+AGG | + | chr7.3:34131944-34131963 | MS.gene42142:intron | 35.0% | |
| TATTGTTGAAGACACACAGA+AGG | + | chr7.3:34132418-34132437 | MS.gene42142:CDS | 35.0% | |
| TCCTATAACTGAACTCCTTA+CGG | - | chr7.3:34131252-34131271 | None:intergenic | 35.0% | |
| TCGTAAAGGATCAGCTTAAT+TGG | - | chr7.3:34131838-34131857 | None:intergenic | 35.0% | |
| TGATGCATGGAGTTTATTGT+AGG | - | chr7.3:34131191-34131210 | None:intergenic | 35.0% | |
| TGTGTCTTCAACAATAACCT+GGG | - | chr7.3:34132414-34132433 | None:intergenic | 35.0% | |
| TTAAGGGTGAGATATACGTT+TGG | + | chr7.3:34132056-34132075 | MS.gene42142:intron | 35.0% | |
| TTACTTTGCAAACAGCTTTG+AGG | + | chr7.3:34131215-34131234 | MS.gene42142:CDS | 35.0% | |
| TTAGCAACAACCACAATTCA+TGG | + | chr7.3:34130572-34130591 | MS.gene42142:intron | 35.0% | |
| TTGAATGACCAGAGTTATGT+TGG | - | chr7.3:34131523-34131542 | None:intergenic | 35.0% | |
| ! | ATAGTTTTTGCTGCTACACT+TGG | - | chr7.3:34130803-34130822 | None:intergenic | 35.0% |
| ! | ATTGGTTAGCTGAAACAAGT+TGG | + | chr7.3:34132625-34132644 | MS.gene42142:intron | 35.0% |
| ! | CAAAGTACCTGATATCCTTT+AGG | - | chr7.3:34130501-34130520 | None:intergenic | 35.0% |
| ! | GAACATGCTTTTGATCGTTA+CGG | + | chr7.3:34129925-34129944 | MS.gene42142:CDS | 35.0% |
| ! | TACTTTGCAAACAGCTTTGA+GGG | + | chr7.3:34131216-34131235 | MS.gene42142:CDS | 35.0% |
| ! | TCGAATATTTGTTGGTGGAT+TGG | + | chr7.3:34129876-34129895 | MS.gene42142:CDS | 35.0% |
| ! | TTCAGCTTTTATCACAATGG+TGG | + | chr7.3:34130271-34130290 | MS.gene42142:intron | 35.0% |
| !! | ACAAAGGTATTTCTAAGAGC+AGG | + | chr7.3:34130740-34130759 | MS.gene42142:CDS | 35.0% |
| !! | CGAATATTTGTTGGTGGATT+GGG | + | chr7.3:34129877-34129896 | MS.gene42142:CDS | 35.0% |
| !! | TATAATATGAGGAAGCGTTG+TGG | - | chr7.3:34131400-34131419 | None:intergenic | 35.0% |
| !!! | CTTATTGGGCTACTTTTCAT+TGG | + | chr7.3:34132607-34132626 | MS.gene42142:intron | 35.0% |
| AAAAACGAGAGGAACTCACA+TGG | + | chr7.3:34132012-34132031 | MS.gene42142:CDS | 40.0% | |
| AATCACTTCCATGCTTGCAA+AGG | + | chr7.3:34132334-34132353 | MS.gene42142:CDS | 40.0% | |
| ACATACGCAGATATGAATCG+AGG | + | chr7.3:34131161-34131180 | MS.gene42142:CDS | 40.0% | |
| ATAATGTCTACCAGCCTGAT+AGG | - | chr7.3:34130846-34130865 | None:intergenic | 40.0% | |
| ATATCTCGTTCACAGGAAGT+TGG | + | chr7.3:34131737-34131756 | MS.gene42142:intron | 40.0% | |
| CAAAGCTTCCACCATTATTC+AGG | + | chr7.3:34131279-34131298 | MS.gene42142:CDS | 40.0% | |
| CAAATGGTTTGAAGGGAAAG+AGG | - | chr7.3:34129973-34129992 | None:intergenic | 40.0% | |
| CCATAGAGACTGTACGTATA+TGG | - | chr7.3:34130888-34130907 | None:intergenic | 40.0% | |
| CCATATACGTACAGTCTCTA+TGG | + | chr7.3:34130885-34130904 | MS.gene42142:CDS | 40.0% | |
| CCTATAACTGAACTCCTTAC+GGG | - | chr7.3:34131251-34131270 | None:intergenic | 40.0% | |
| CTTTAGGCTTCAAGAGAAAC+TGG | + | chr7.3:34131960-34131979 | MS.gene42142:intron | 40.0% | |
| GGATAAGCTTGAAAAACGAG+AGG | + | chr7.3:34132001-34132020 | MS.gene42142:CDS | 40.0% | |
| GTGTAGCTAGAAAAGAGCTT+AGG | + | chr7.3:34131468-34131487 | MS.gene42142:intron | 40.0% | |
| GTGTGTCTTCAACAATAACC+TGG | - | chr7.3:34132415-34132434 | None:intergenic | 40.0% | |
| TAATGTCTACCAGCCTGATA+GGG | - | chr7.3:34130845-34130864 | None:intergenic | 40.0% | |
| TATGGACAACCTTGATGAGA+AGG | + | chr7.3:34130443-34130462 | MS.gene42142:intron | 40.0% | |
| TCACAGGAAGTTGGAATGAA+AGG | + | chr7.3:34131746-34131765 | MS.gene42142:intron | 40.0% | |
| TGGTGCACTTAAAGAAGCAA+AGG | + | chr7.3:34131980-34131999 | MS.gene42142:CDS | 40.0% | |
| TTATCAGAACATGAGAAGGG+AGG | + | chr7.3:34131114-34131133 | MS.gene42142:CDS | 40.0% | |
| TTCTCATCAAGGTTGTCCAT+AGG | - | chr7.3:34130444-34130463 | None:intergenic | 40.0% | |
| ! | ATTTCTAAGAGCAGGTCAGA+TGG | + | chr7.3:34130748-34130767 | MS.gene42142:CDS | 40.0% |
| ! | CTGAATAATGGTGGAAGCTT+TGG | - | chr7.3:34131281-34131300 | None:intergenic | 40.0% |
| ! | GAAAAGCATATCTCGTTCAC+AGG | + | chr7.3:34131730-34131749 | MS.gene42142:intron | 40.0% |
| ! | GGCTGTCCATTTTGTAGATT+GGG | + | chr7.3:34130714-34130733 | MS.gene42142:intron | 40.0% |
| ! | TGGCTGTCCATTTTGTAGAT+TGG | + | chr7.3:34130713-34130732 | MS.gene42142:intron | 40.0% |
| !! | ATTCTTCTAGATTGGTCTGC+AGG | - | chr7.3:34132250-34132269 | None:intergenic | 40.0% |
| !! | ATTTGTTGGTGGATTGGGTT+GGG | + | chr7.3:34129882-34129901 | MS.gene42142:CDS | 40.0% |
| !! | TATTTGTTGGTGGATTGGGT+TGG | + | chr7.3:34129881-34129900 | MS.gene42142:CDS | 40.0% |
| ACCTGGGTCTCTTGAATAAC+AGG | - | chr7.3:34132398-34132417 | None:intergenic | 45.0% | |
| AGAGCTTAGGAGCCTGAAAA+TGG | + | chr7.3:34131481-34131500 | MS.gene42142:intron | 45.0% | |
| AGATGGCTGAATTAGATGCC+CGG | + | chr7.3:34130765-34130784 | MS.gene42142:CDS | 45.0% | |
| ATGACCAGAGTTATGTTGGC+TGG | - | chr7.3:34131519-34131538 | None:intergenic | 45.0% | |
| CAATCTAGGTCACGAAATCG+TGG | - | chr7.3:34130309-34130328 | None:intergenic | 45.0% | |
| CAATTGTGACACAATGCCGA+TGG | + | chr7.3:34131438-34131457 | MS.gene42142:intron | 45.0% | |
| CCCGTAAGGAGTTCAGTTAT+AGG | + | chr7.3:34131248-34131267 | MS.gene42142:CDS | 45.0% | |
| CGATTTCGTGACCTAGATTG+CGG | + | chr7.3:34130309-34130328 | MS.gene42142:intron | 45.0% | |
| CTAGAAAAGATGGGGCCTAA+AGG | + | chr7.3:34130483-34130502 | MS.gene42142:CDS | 45.0% | |
| CTCTTGAAGCCTAAAGCACA+TGG | - | chr7.3:34131956-34131975 | None:intergenic | 45.0% | |
| CTGAAAAATTTCAGGCTCGC+TGG | + | chr7.3:34131369-34131388 | MS.gene42142:intron | 45.0% | |
| GGATACTTGGTCACTTGCAT+AGG | - | chr7.3:34132191-34132210 | None:intergenic | 45.0% | |
| GTGTGTACGAATTCCCTATC+AGG | + | chr7.3:34130829-34130848 | MS.gene42142:CDS | 45.0% | |
| TACGTACAGTCTCTATGGAG+AGG | + | chr7.3:34130890-34130909 | MS.gene42142:CDS | 45.0% | |
| TCAAGCAGCAAGATGTCATG+CGG | - | chr7.3:34131018-34131037 | None:intergenic | 45.0% | |
| TCCTGTTATTCAAGAGACCC+AGG | + | chr7.3:34132394-34132413 | MS.gene42142:CDS | 45.0% | |
| TGGGTCTCTTGAATAACAGG+AGG | - | chr7.3:34132395-34132414 | None:intergenic | 45.0% | |
| TTTGCTCTGCATATCCTGCA+GGG | - | chr7.3:34132306-34132325 | None:intergenic | 45.0% | |
| !! | AACAGGAGGTGCTTCTTCAA+TGG | - | chr7.3:34132381-34132400 | None:intergenic | 45.0% |
| !! | GCAAAGTAAGCACTGATGCA+TGG | - | chr7.3:34131204-34131223 | None:intergenic | 45.0% |
| !! | TGGATTGGGTTGGGATGTTA+CGG | + | chr7.3:34129891-34129910 | MS.gene42142:CDS | 45.0% |
| !! | TTTGAAGGGAAAGAGGTACC+TGG | - | chr7.3:34129966-34129985 | None:intergenic | 45.0% |
| AAAACTGCAGAACTCCCTGC+AGG | + | chr7.3:34132289-34132308 | MS.gene42142:CDS | 50.0% | |
| AAGGTCCATGACCGCAATCT+AGG | - | chr7.3:34130323-34130342 | None:intergenic | 50.0% | |
| ACTTGGTACTTGAGCTCTCC+GGG | - | chr7.3:34130786-34130805 | None:intergenic | 50.0% | |
| AGGGAATTCGTACACACCGT+TGG | - | chr7.3:34130826-34130845 | None:intergenic | 50.0% | |
| CACTTGGTACTTGAGCTCTC+CGG | - | chr7.3:34130787-34130806 | None:intergenic | 50.0% | |
| CGGCAAAATTCTCGAATGCC+AGG | + | chr7.3:34129945-34129964 | MS.gene42142:CDS | 50.0% | |
| CTTTGCTCTGCATATCCTGC+AGG | - | chr7.3:34132307-34132326 | None:intergenic | 50.0% | |
| GATGGGGCCTAAAGGATATC+AGG | + | chr7.3:34130491-34130510 | MS.gene42142:CDS | 50.0% | |
| GCATCCAGCCAACATAACTC+TGG | + | chr7.3:34131512-34131531 | MS.gene42142:intron | 50.0% | |
| GTACGAATTCCCTATCAGGC+TGG | + | chr7.3:34130833-34130852 | MS.gene42142:CDS | 50.0% | |
| TGTGACACAATGCCGATGGA+GGG | + | chr7.3:34131442-34131461 | MS.gene42142:intron | 50.0% | |
| TTGTGACACAATGCCGATGG+AGG | + | chr7.3:34131441-34131460 | MS.gene42142:intron | 50.0% | |
| CGTGACCTAGATTGCGGTCA+TGG | + | chr7.3:34130315-34130334 | MS.gene42142:intron | 55.0% | |
| CTCTCGCTCCTTTGCAAGCA+TGG | - | chr7.3:34132345-34132364 | None:intergenic | 55.0% | |
| GGCAAGCTGCCTTCTCATCA+AGG | - | chr7.3:34130455-34130474 | None:intergenic | 55.0% | |
| GTGACACAATGCCGATGGAG+GGG | + | chr7.3:34131443-34131462 | MS.gene42142:intron | 55.0% | |
| TGACACAATGCCGATGGAGG+GGG | + | chr7.3:34131444-34131463 | MS.gene42142:intron | 55.0% | |
| TAGCTACACGCCCCCTCCAT+CGG | - | chr7.3:34131457-34131476 | None:intergenic | 60.0% | |
| GAGGGCAATCGCTGCCCGTA+AGG | + | chr7.3:34131234-34131253 | MS.gene42142:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 34129856 | 34132651 | 34129856 | ID=MS.gene42142 |
| chr7.3 | mRNA | 34129856 | 34132651 | 34129856 | ID=MS.gene42142.t1;Parent=MS.gene42142 |
| chr7.3 | exon | 34129856 | 34129966 | 34129856 | ID=MS.gene42142.t1.exon1;Parent=MS.gene42142.t1 |
| chr7.3 | CDS | 34129856 | 34129966 | 34129856 | ID=cds.MS.gene42142.t1;Parent=MS.gene42142.t1 |
| chr7.3 | exon | 34130465 | 34130512 | 34130465 | ID=MS.gene42142.t1.exon2;Parent=MS.gene42142.t1 |
| chr7.3 | CDS | 34130465 | 34130512 | 34130465 | ID=cds.MS.gene42142.t1;Parent=MS.gene42142.t1 |
| chr7.3 | exon | 34130731 | 34130911 | 34130731 | ID=MS.gene42142.t1.exon3;Parent=MS.gene42142.t1 |
| chr7.3 | CDS | 34130731 | 34130911 | 34130731 | ID=cds.MS.gene42142.t1;Parent=MS.gene42142.t1 |
| chr7.3 | exon | 34131095 | 34131300 | 34131095 | ID=MS.gene42142.t1.exon4;Parent=MS.gene42142.t1 |
| chr7.3 | CDS | 34131095 | 34131300 | 34131095 | ID=cds.MS.gene42142.t1;Parent=MS.gene42142.t1 |
| chr7.3 | exon | 34131966 | 34132061 | 34131966 | ID=MS.gene42142.t1.exon5;Parent=MS.gene42142.t1 |
| chr7.3 | CDS | 34131966 | 34132061 | 34131966 | ID=cds.MS.gene42142.t1;Parent=MS.gene42142.t1 |
| chr7.3 | exon | 34132254 | 34132475 | 34132254 | ID=MS.gene42142.t1.exon6;Parent=MS.gene42142.t1 |
| chr7.3 | CDS | 34132254 | 34132475 | 34132254 | ID=cds.MS.gene42142.t1;Parent=MS.gene42142.t1 |
| chr7.3 | exon | 34132634 | 34132651 | 34132634 | ID=MS.gene42142.t1.exon7;Parent=MS.gene42142.t1 |
| chr7.3 | CDS | 34132634 | 34132651 | 34132634 | ID=cds.MS.gene42142.t1;Parent=MS.gene42142.t1 |
| Gene Sequence |
| Protein sequence |
