AlfalfaGEDB | MS.gene54407

M. sativa cultivar XinJiangDaYe / MS.gene54407

KEGG: -
GO: GO:0003674 GO:0005215 GO:0005575 GO:0006810 GO:0008150 GO:0016020 GO:0022857 GO:0051179 GO:0051234 GO:0055085 GO:0110165
PFAM: PF00854.24

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene54407.t1	XP_003621048.1	95.9	218	9	0	1	218	419	636	5.20E-115	423.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene54407.t1	Q9LYR6	76.8	194	43	1	1	194	420	611	2.6e-83	309.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene54407.t1	G7KXR0	95.9	218	9	0	1	218	419	636	3.8e-115	423.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049260	MS.gene54407	0.817809	2.72E-52	-1.69E-46
MS.gene049297	MS.gene54407	0.816172	6.34E-52	-1.69E-46
MS.gene049346	MS.gene54407	0.843587	1.28E-58	-1.69E-46
MS.gene049758	MS.gene54407	0.861872	7.56E-64	-1.69E-46
MS.gene049910	MS.gene54407	0.802359	5.82E-49	-1.69E-46
MS.gene049915	MS.gene54407	0.812142	4.92E-51	-1.69E-46
MS.gene050099	MS.gene54407	0.809355	1.97E-50	-1.69E-46
MS.gene050128	MS.gene54407	0.819088	1.40E-52	-1.69E-46
MS.gene050301	MS.gene54407	0.848341	6.52E-60	-1.69E-46
MS.gene050330	MS.gene54407	-0.806079	9.79E-50	-1.69E-46
MS.gene050397	MS.gene54407	0.81404	1.89E-51	-1.69E-46
MS.gene050558	MS.gene54407	0.815526	8.84E-52	-1.69E-46
MS.gene05101	MS.gene54407	0.816913	4.33E-52	-1.69E-46
MS.gene051240	MS.gene54407	0.810179	1.31E-50	-1.69E-46
MS.gene051471	MS.gene54407	0.81141	7.10E-51	-1.69E-46
MS.gene051626	MS.gene54407	0.829149	6.05E-55	-1.69E-46
MS.gene051662	MS.gene54407	0.824228	9.04E-54	-1.69E-46
MS.gene051663	MS.gene54407	0.822122	2.81E-53	-1.69E-46
MS.gene051789	MS.gene54407	0.835841	1.33E-56	-1.69E-46
MS.gene051860	MS.gene54407	0.819761	9.80E-53	-1.69E-46
MS.gene052078	MS.gene54407	0.815433	9.27E-52	-1.69E-46
MS.gene052178	MS.gene54407	0.861301	1.13E-63	-1.69E-46
MS.gene052207	MS.gene54407	0.8121	5.02E-51	-1.69E-46
MS.gene052340	MS.gene54407	0.814872	1.23E-51	-1.69E-46
MS.gene052600	MS.gene54407	0.816008	6.90E-52	-1.69E-46
MS.gene052967	MS.gene54407	0.81119	7.93E-51	-1.69E-46
MS.gene053074	MS.gene54407	0.812663	3.78E-51	-1.69E-46
MS.gene053204	MS.gene54407	0.810602	1.06E-50	-1.69E-46
MS.gene053557	MS.gene54407	0.816793	4.60E-52	-1.69E-46
MS.gene053836	MS.gene54407	0.8688	4.99E-66	-1.69E-46
MS.gene053907	MS.gene54407	0.806438	8.23E-50	-1.69E-46
MS.gene053928	MS.gene54407	0.80361	3.21E-49	-1.69E-46
MS.gene054011	MS.gene54407	0.81527	1.01E-51	-1.69E-46
MS.gene054012	MS.gene54407	0.808395	3.16E-50	-1.69E-46
MS.gene054013	MS.gene54407	0.80544	1.33E-49	-1.69E-46
MS.gene054184	MS.gene54407	0.838023	3.68E-57	-1.69E-46
MS.gene054185	MS.gene54407	0.83813	3.45E-57	-1.69E-46
MS.gene054214	MS.gene54407	0.811826	5.77E-51	-1.69E-46
MS.gene054473	MS.gene54407	0.840239	9.80E-58	-1.69E-46
MS.gene054542	MS.gene54407	0.800748	1.25E-48	-1.69E-46
MS.gene054596	MS.gene54407	0.809548	1.79E-50	-1.69E-46
MS.gene054618	MS.gene54407	0.802924	4.45E-49	-1.69E-46
MS.gene054942	MS.gene54407	0.810262	1.26E-50	-1.69E-46
MS.gene054983	MS.gene54407	0.807601	4.67E-50	-1.69E-46
MS.gene055133	MS.gene54407	0.840974	6.29E-58	-1.69E-46
MS.gene055207	MS.gene54407	0.819645	1.04E-52	-1.69E-46
MS.gene055277	MS.gene54407	0.8413	5.17E-58	-1.69E-46
MS.gene055390	MS.gene54407	0.813928	2.00E-51	-1.69E-46
MS.gene055422	MS.gene54407	0.840064	1.09E-57	-1.69E-46
MS.gene055428	MS.gene54407	0.853942	1.71E-61	-1.69E-46
MS.gene055604	MS.gene54407	0.83864	2.55E-57	-1.69E-46
MS.gene055712	MS.gene54407	0.80417	2.46E-49	-1.69E-46
MS.gene056069	MS.gene54407	-0.821397	4.13E-53	-1.69E-46
MS.gene056191	MS.gene54407	0.81969	1.02E-52	-1.69E-46
MS.gene056314	MS.gene54407	0.822592	2.18E-53	-1.69E-46
MS.gene056612	MS.gene54407	0.833283	5.83E-56	-1.69E-46
MS.gene056772	MS.gene54407	0.803241	3.83E-49	-1.69E-46
MS.gene05702	MS.gene54407	0.836113	1.13E-56	-1.69E-46
MS.gene057121	MS.gene54407	0.832779	7.78E-56	-1.69E-46
MS.gene057245	MS.gene54407	0.811932	5.47E-51	-1.69E-46
MS.gene057260	MS.gene54407	0.809868	1.53E-50	-1.69E-46
MS.gene05733	MS.gene54407	0.829409	5.23E-55	-1.69E-46
MS.gene057439	MS.gene54407	0.845818	3.20E-59	-1.69E-46
MS.gene057754	MS.gene54407	0.835578	1.55E-56	-1.69E-46
MS.gene057796	MS.gene54407	0.809798	1.58E-50	-1.69E-46
MS.gene058002	MS.gene54407	0.837188	6.02E-57	-1.69E-46
MS.gene05811	MS.gene54407	0.853158	2.87E-61	-1.69E-46
MS.gene058142	MS.gene54407	0.820784	5.71E-53	-1.69E-46
MS.gene058182	MS.gene54407	0.808589	2.88E-50	-1.69E-46
MS.gene058201	MS.gene54407	0.804242	2.37E-49	-1.69E-46
MS.gene058236	MS.gene54407	0.814088	1.84E-51	-1.69E-46
MS.gene058749	MS.gene54407	0.844814	5.99E-59	-1.69E-46
MS.gene058845	MS.gene54407	0.829018	6.51E-55	-1.69E-46
MS.gene05907	MS.gene54407	0.830361	3.07E-55	-1.69E-46
MS.gene059228	MS.gene54407	0.8284	9.18E-55	-1.69E-46
MS.gene059294	MS.gene54407	0.806326	8.68E-50	-1.69E-46
MS.gene059518	MS.gene54407	0.858308	9.00E-63	-1.69E-46
MS.gene059597	MS.gene54407	0.80775	4.34E-50	-1.69E-46
MS.gene05984	MS.gene54407	0.842921	1.92E-58	-1.69E-46
MS.gene059894	MS.gene54407	0.859156	5.03E-63	-1.69E-46
MS.gene059974	MS.gene54407	0.803478	3.42E-49	-1.69E-46
MS.gene06037	MS.gene54407	0.867585	1.23E-65	-1.69E-46
MS.gene060476	MS.gene54407	0.88416	2.43E-71	-1.69E-46
MS.gene061049	MS.gene54407	0.87112	8.71E-67	-1.69E-46
MS.gene061112	MS.gene54407	0.805311	1.42E-49	-1.69E-46
MS.gene061113	MS.gene54407	0.81431	1.64E-51	-1.69E-46
MS.gene061265	MS.gene54407	0.807593	4.69E-50	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene54407.t1	MTR_7g006540	95.872	218	9	0	1	218	419	636	7.86e-153	438
MS.gene54407.t1	MTR_7g067010	41.753	194	108	2	1	194	373	561	2.55e-43	153
MS.gene54407.t1	MTR_3g112470	38.095	210	115	3	1	209	372	567	7.57e-43	152
MS.gene54407.t1	MTR_3g112460	36.967	211	113	4	1	205	372	568	1.31e-41	148
MS.gene54407.t1	MTR_4g015080	41.237	194	109	2	1	194	383	571	4.24e-41	147
MS.gene54407.t1	MTR_4g033310	41.667	192	101	4	6	193	302	486	1.30e-40	145
MS.gene54407.t1	MTR_4g033315	41.667	192	101	4	6	193	366	550	2.71e-40	145
MS.gene54407.t1	MTR_4g033310	41.667	192	101	4	6	193	366	550	2.71e-40	145
MS.gene54407.t1	MTR_7g111260	36.041	197	117	2	1	196	360	548	1.38e-39	143
MS.gene54407.t1	MTR_1g085090	36.364	198	117	2	1	197	360	549	6.90e-39	141
MS.gene54407.t1	MTR_8g038880	36.500	200	119	3	6	203	366	559	7.10e-39	141
MS.gene54407.t1	MTR_3g462710	37.113	194	117	2	1	194	266	454	1.59e-38	139
MS.gene54407.t1	MTR_3g112450	37.799	209	114	4	3	209	375	569	3.27e-38	139
MS.gene54407.t1	MTR_3g462710	37.113	194	117	2	1	194	375	563	7.45e-38	138
MS.gene54407.t1	MTR_3g014790	35.323	201	120	3	4	200	359	553	2.89e-37	136
MS.gene54407.t1	MTR_5g085850	36.126	191	107	2	7	197	384	559	3.79e-37	136
MS.gene54407.t1	MTR_3g069420	37.879	198	117	3	13	208	392	585	4.65e-37	136
MS.gene54407.t1	MTR_4g123537	32.883	222	138	4	1	219	384	597	4.99e-37	136
MS.gene54407.t1	MTR_0294s0020	38.021	192	116	2	7	198	365	553	6.08e-37	135
MS.gene54407.t1	MTR_3g100980	40.306	196	107	4	1	195	365	551	7.03e-37	135
MS.gene54407.t1	MTR_3g072300	38.462	195	112	4	4	196	375	563	7.94e-37	135
MS.gene54407.t1	MTR_3g100980	40.306	196	107	4	1	195	393	579	8.34e-37	135
MS.gene54407.t1	MTR_4g033385	38.462	195	113	3	6	198	267	456	9.12e-37	134
MS.gene54407.t1	MTR_4g033325	38.579	197	110	3	6	198	240	429	1.02e-36	133
MS.gene54407.t1	MTR_4g033325	38.579	197	110	3	6	198	266	455	1.45e-36	133
MS.gene54407.t1	MTR_4g033325	38.579	197	110	3	6	198	364	553	4.06e-36	133
MS.gene54407.t1	MTR_2g017750	35.176	199	123	4	1	196	395	590	7.45e-36	133
MS.gene54407.t1	MTR_8g103233	41.711	187	102	3	7	191	372	553	1.04e-35	132
MS.gene54407.t1	MTR_8g469470	35.450	189	116	3	7	195	400	582	4.51e-35	130
MS.gene54407.t1	MTR_3g069440	33.158	190	123	2	6	195	384	569	6.65e-35	130
MS.gene54407.t1	MTR_5g038380	35.897	195	117	4	1	194	387	574	3.45e-34	128
MS.gene54407.t1	MTR_8g469310	35.897	195	121	3	1	194	380	571	5.18e-34	127
MS.gene54407.t1	MTR_4g033330	40.230	174	93	4	7	176	367	533	3.27e-33	125
MS.gene54407.t1	MTR_3g069500	32.105	190	115	3	6	195	386	561	5.84e-33	125
MS.gene54407.t1	MTR_3g005010	35.385	195	115	3	4	194	356	543	6.63e-33	124
MS.gene54407.t1	MTR_7g098200	33.010	206	134	2	14	219	277	478	1.47e-32	123
MS.gene54407.t1	MTR_7g088825	33.484	221	140	4	1	220	376	590	2.84e-32	123
MS.gene54407.t1	MTR_7g088790	33.333	195	124	3	1	194	383	572	4.02e-32	122
MS.gene54407.t1	MTR_7g098230	32.864	213	129	5	7	215	379	581	5.11e-32	122
MS.gene54407.t1	MTR_7g098200	32.864	213	137	3	9	219	374	582	6.45e-32	122
MS.gene54407.t1	MTR_7g098200	32.864	213	137	3	9	219	384	592	7.01e-32	122
MS.gene54407.t1	MTR_7g098040	35.047	214	126	6	7	213	387	594	8.17e-32	122
MS.gene54407.t1	MTR_5g038190	31.841	201	125	4	7	205	387	577	1.00e-31	121
MS.gene54407.t1	MTR_2g101590	34.826	201	125	3	16	216	393	587	4.10e-31	120
MS.gene54407.t1	MTR_2g101610	34.826	201	125	3	16	216	394	588	4.49e-31	120
MS.gene54407.t1	MTR_4g107530	36.620	213	119	5	3	209	391	593	4.68e-31	119
MS.gene54407.t1	MTR_8g469480	34.536	194	121	3	1	194	397	584	7.50e-31	119
MS.gene54407.t1	MTR_4g011280	33.175	211	134	3	8	214	389	596	8.83e-31	119
MS.gene54407.t1	MTR_8g087780	40.201	199	114	4	1	196	380	576	1.13e-30	118
MS.gene54407.t1	MTR_4g107670	33.673	196	125	4	1	195	381	572	1.28e-30	118
MS.gene54407.t1	MTR_2g101650	35.979	189	118	2	3	191	378	563	1.60e-30	118
MS.gene54407.t1	MTR_5g038060	35.870	184	112	3	11	194	400	577	1.91e-30	118
MS.gene54407.t1	MTR_7g010820	35.961	203	129	1	1	203	379	580	1.96e-30	118
MS.gene54407.t1	MTR_4g019580	31.383	188	121	2	7	194	390	569	2.09e-30	117
MS.gene54407.t1	MTR_7g088820	30.909	220	139	5	1	212	269	483	2.43e-30	117
MS.gene54407.t1	MTR_4g107510	36.453	203	106	6	3	194	394	584	2.69e-30	117
MS.gene54407.t1	MTR_7g013270	36.269	193	112	4	1	192	442	624	2.83e-30	117
MS.gene54407.t1	MTR_7g088820	30.909	220	139	5	1	212	317	531	3.24e-30	117
MS.gene54407.t1	MTR_8g087810	39.683	189	109	4	11	196	391	577	3.48e-30	117
MS.gene54407.t1	MTR_7g065080	32.984	191	110	4	6	194	297	471	3.89e-30	116
MS.gene54407.t1	MTR_7g088820	30.909	220	139	5	1	212	379	593	4.45e-30	117
MS.gene54407.t1	MTR_5g012270	31.606	193	127	2	8	200	391	578	5.28e-30	116
MS.gene54407.t1	MTR_2g101560	35.567	194	113	4	16	203	394	581	5.37e-30	117
MS.gene54407.t1	MTR_7g065080	32.984	191	110	4	6	194	384	558	7.59e-30	116
MS.gene54407.t1	MTR_7g098160	32.710	214	137	5	8	219	387	595	1.38e-29	115
MS.gene54407.t1	MTR_7g098180	35.484	186	114	3	9	193	389	569	1.46e-29	115
MS.gene54407.t1	MTR_4g107580	30.531	226	139	6	3	219	383	599	3.06e-29	114
MS.gene54407.t1	MTR_7g098090	33.168	202	129	4	8	207	392	589	4.63e-29	114
MS.gene54407.t1	MTR_5g055000	32.273	220	140	5	1	216	369	583	8.50e-29	113
MS.gene54407.t1	MTR_1g075440	31.925	213	134	4	1	212	377	579	1.00e-28	113
MS.gene54407.t1	MTR_2g005130	34.184	196	108	6	5	194	383	563	1.34e-28	112
MS.gene54407.t1	MTR_7g005930	32.292	192	121	2	1	192	385	567	1.56e-28	112
MS.gene54407.t1	MTR_1g026740	38.743	191	114	2	1	191	366	553	1.64e-28	112
MS.gene54407.t1	MTR_1g116930	32.812	192	120	2	1	192	373	555	1.81e-28	112
MS.gene54407.t1	MTR_5g012290	29.665	209	141	3	1	209	382	584	3.51e-28	111
MS.gene54407.t1	MTR_4g024930	34.197	193	118	3	1	192	369	553	4.36e-28	111
MS.gene54407.t1	MTR_4g114340	35.714	196	115	5	1	194	373	559	4.74e-28	111
MS.gene54407.t1	MTR_7g098220	33.155	187	119	4	9	193	341	523	5.10e-28	110
MS.gene54407.t1	MTR_7g098220	33.155	187	119	4	9	193	385	567	6.00e-28	110
MS.gene54407.t1	MTR_2g101640	32.663	199	125	3	8	203	382	574	1.05e-27	110
MS.gene54407.t1	MTR_6g008690	30.526	190	129	2	7	196	352	538	8.10e-27	107
MS.gene54407.t1	MTR_5g014150	31.606	193	126	3	1	192	399	586	8.16e-26	105
MS.gene54407.t1	MTR_4g098800	32.124	193	120	3	1	192	456	638	2.48e-25	103
MS.gene54407.t1	MTR_4g098800	32.124	193	120	3	1	192	391	573	2.73e-25	103
MS.gene54407.t1	MTR_1g026770	38.122	181	109	2	11	191	373	550	3.73e-25	102
MS.gene54407.t1	MTR_1g041835	34.536	194	121	3	4	196	378	566	4.80e-25	102
MS.gene54407.t1	MTR_1g042310	31.414	191	125	3	7	196	337	522	6.29e-25	102
MS.gene54407.t1	MTR_3g065350	39.669	121	65	1	1	121	43	155	6.30e-25	96.3
MS.gene54407.t1	MTR_1g042310	31.414	191	125	3	7	196	344	529	6.40e-25	102
MS.gene54407.t1	MTR_1g042310	31.414	191	125	3	7	196	381	566	7.98e-25	102
MS.gene54407.t1	MTR_4g101380	30.846	201	133	3	8	208	392	586	9.05e-25	102
MS.gene54407.t1	MTR_1g041815	34.021	194	122	3	4	196	378	566	9.13e-25	102
MS.gene54407.t1	MTR_1g026750	36.126	191	119	2	1	191	367	554	3.66e-24	100
MS.gene54407.t1	MTR_1g041875	32.317	164	100	2	7	170	384	536	5.74e-24	99.8
MS.gene54407.t1	MTR_1g057460	30.978	184	116	2	8	191	392	564	9.80e-24	99.0
MS.gene54407.t1	MTR_1g057460	30.978	184	116	2	8	191	321	493	1.42e-23	98.2
MS.gene54407.t1	MTR_0236s0050	31.818	176	109	2	16	191	329	493	2.93e-23	97.4
MS.gene54407.t1	MTR_1g041885	31.073	177	111	2	1	177	331	496	5.43e-23	96.7
MS.gene54407.t1	MTR_1g009200	36.500	200	120	4	11	208	387	581	7.18e-22	93.6
MS.gene54407.t1	MTR_4g033375	39.706	136	73	2	6	137	368	498	9.17e-22	93.2
MS.gene54407.t1	MTR_4g033395	38.806	134	77	2	6	137	368	498	1.11e-20	90.1
MS.gene54407.t1	MTR_1g009170	34.756	164	98	2	10	173	203	357	6.63e-18	81.6
MS.gene54407.t1	MTR_7g052600	31.795	195	113	5	5	191	343	525	1.19e-17	81.3
MS.gene54407.t1	MTR_7g051830	30.108	186	113	4	11	191	352	525	2.03e-17	80.5
MS.gene54407.t1	MTR_4g107610	28.646	192	127	5	13	202	397	580	2.09e-17	80.5
MS.gene54407.t1	MTR_2g093180	28.042	189	114	5	7	194	381	548	1.41e-16	78.2
MS.gene54407.t1	MTR_7g064780	28.061	196	126	6	2	191	381	567	1.53e-16	78.2
MS.gene54407.t1	MTR_7g051880	30.108	186	113	4	11	191	352	525	1.98e-16	77.8
MS.gene54407.t1	MTR_2g093640	25.532	188	120	4	7	194	380	547	7.29e-16	76.3
MS.gene54407.t1	MTR_7g098210	26.738	187	116	4	9	193	274	441	7.50e-15	73.2
MS.gene54407.t1	MTR_2g093160	28.931	159	94	3	37	194	407	547	8.43e-15	73.2
MS.gene54407.t1	MTR_4g033390	34.783	92	58	1	107	198	30	119	1.09e-14	68.6
MS.gene54407.t1	MTR_7g064800	28.272	191	126	4	1	189	386	567	1.10e-11	63.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene54407.t1	AT5G13400	76.804	194	43	1	1	194	420	611	9.82e-107	320
MS.gene54407.t1	AT5G01180	39.175	194	113	2	1	194	375	563	9.12e-40	143
MS.gene54407.t1	AT5G01180	39.175	194	113	2	1	194	375	563	9.12e-40	143
MS.gene54407.t1	AT5G01180	39.175	194	113	2	1	194	375	563	9.12e-40	143
MS.gene54407.t1	AT2G02040	41.667	192	108	3	3	194	394	581	2.43e-38	140
MS.gene54407.t1	AT3G54140	37.949	195	114	3	1	194	375	563	1.33e-37	137
MS.gene54407.t1	AT3G54140	37.949	195	114	3	1	194	375	563	1.33e-37	137
MS.gene54407.t1	AT3G54450	35.450	189	118	2	6	194	358	542	1.07e-36	135
MS.gene54407.t1	AT3G53960	35.751	193	111	4	6	195	392	574	1.30e-36	135
MS.gene54407.t1	AT1G69870	35.071	211	129	4	7	217	413	615	2.09e-36	135
MS.gene54407.t1	AT2G02020	39.378	193	107	4	3	193	337	521	2.62e-35	130
MS.gene54407.t1	AT2G02020	39.378	193	107	4	3	193	358	542	2.72e-35	131
MS.gene54407.t1	AT1G62200	39.674	184	95	4	3	184	408	577	5.06e-35	130
MS.gene54407.t1	AT1G62200	39.674	184	95	4	3	184	451	620	6.77e-35	130
MS.gene54407.t1	AT1G62200	39.674	184	95	4	3	184	437	606	6.99e-35	130
MS.gene54407.t1	AT2G40460	35.052	194	122	3	4	197	369	558	4.43e-34	128
MS.gene54407.t1	AT1G27040	36.181	199	111	5	1	193	372	560	1.67e-33	126
MS.gene54407.t1	AT1G22550	36.269	193	112	4	6	194	374	559	1.72e-33	126
MS.gene54407.t1	AT1G27040	36.181	199	111	5	1	193	340	528	1.72e-33	126
MS.gene54407.t1	AT1G72140	37.186	199	114	4	1	195	362	553	1.74e-33	126
MS.gene54407.t1	AT1G27040	36.181	199	111	5	1	193	368	556	1.95e-33	126
MS.gene54407.t1	AT1G69850	35.204	196	122	4	1	195	389	580	3.06e-33	125
MS.gene54407.t1	AT1G22540	34.896	192	114	4	4	191	365	549	3.58e-33	125
MS.gene54407.t1	AT3G21670	35.789	190	107	2	7	196	386	560	3.72e-33	125
MS.gene54407.t1	AT3G47960	35.602	191	117	3	6	194	422	608	1.48e-32	124
MS.gene54407.t1	AT1G72120	35.354	198	117	4	1	194	362	552	3.33e-31	120
MS.gene54407.t1	AT1G68570	33.831	201	129	3	1	200	347	544	1.68e-30	118
MS.gene54407.t1	AT1G68570	33.831	201	129	3	1	200	377	574	2.09e-30	118
MS.gene54407.t1	AT1G72130	32.653	196	122	4	4	199	235	420	1.12e-29	114
MS.gene54407.t1	AT1G72130	32.653	196	122	4	4	199	235	420	1.12e-29	114
MS.gene54407.t1	AT1G72130	32.653	196	122	4	4	199	353	538	3.23e-29	114
MS.gene54407.t1	AT5G62680	32.461	191	123	3	6	194	406	592	3.90e-29	114
MS.gene54407.t1	AT1G52190	37.173	191	113	3	3	191	381	566	4.81e-29	114
MS.gene54407.t1	AT1G32450	32.857	210	134	4	1	208	395	599	6.13e-29	114
MS.gene54407.t1	AT1G33440	32.569	218	132	5	5	216	388	596	6.66e-29	114
MS.gene54407.t1	AT3G01350	30.964	197	135	1	7	203	365	560	7.10e-29	113
MS.gene54407.t1	AT2G37900	32.632	190	116	3	6	195	311	488	9.18e-29	112
MS.gene54407.t1	AT2G37900	32.632	190	116	3	6	195	390	567	1.15e-28	113
MS.gene54407.t1	AT3G16180	37.864	206	112	5	13	207	391	591	1.73e-28	112
MS.gene54407.t1	AT1G72125	32.828	198	130	2	1	198	366	560	2.14e-28	112
MS.gene54407.t1	AT1G18880	32.487	197	123	4	3	194	375	566	2.66e-28	112
MS.gene54407.t1	AT5G46050	35.928	167	103	2	4	170	266	428	3.46e-28	110
MS.gene54407.t1	AT2G26690	34.466	206	125	5	1	205	341	537	3.66e-28	111
MS.gene54407.t1	AT1G22570	33.333	195	116	4	4	194	339	523	3.67e-28	111
MS.gene54407.t1	AT5G62730	30.693	202	132	4	1	197	331	529	3.86e-28	111
MS.gene54407.t1	AT2G26690	34.466	206	125	5	1	205	329	525	3.90e-28	111
MS.gene54407.t1	AT2G26690	34.466	206	125	5	1	205	374	570	4.08e-28	111
MS.gene54407.t1	AT1G22570	33.333	195	116	4	4	194	376	560	4.76e-28	111
MS.gene54407.t1	AT5G62730	30.693	202	132	4	1	197	390	588	5.62e-28	111
MS.gene54407.t1	AT5G46050	35.928	167	103	2	4	170	378	540	8.45e-28	110
MS.gene54407.t1	AT5G14940	28.351	194	128	3	7	197	359	544	1.27e-27	110
MS.gene54407.t1	AT5G46040	33.175	211	134	4	4	212	378	583	4.27e-27	108
MS.gene54407.t1	AT1G59740	33.333	183	111	3	5	186	397	569	7.97e-27	107
MS.gene54407.t1	AT1G27080	31.868	182	110	3	13	194	339	506	5.11e-26	105
MS.gene54407.t1	AT1G27080	30.851	188	116	3	7	194	375	548	5.98e-26	105
MS.gene54407.t1	AT1G69860	32.979	188	113	2	7	194	375	549	7.07e-26	105
MS.gene54407.t1	AT4G21680	35.714	196	118	4	1	193	382	572	6.40e-25	102
MS.gene54407.t1	AT1G12110	29.808	208	137	4	1	208	384	582	5.06e-24	99.8
MS.gene54407.t1	AT5G19640	30.256	195	114	4	1	192	407	582	6.31e-23	96.7
MS.gene54407.t1	AT3G25280	32.692	156	92	3	37	191	378	521	6.99e-21	90.5
MS.gene54407.t1	AT3G25260	30.000	190	108	5	5	191	348	515	1.78e-20	89.4
MS.gene54407.t1	AT3G45650	28.218	202	125	5	7	208	368	549	4.71e-20	88.2
MS.gene54407.t1	AT5G28470	28.889	180	118	4	13	191	383	553	9.07e-19	84.7
MS.gene54407.t1	AT3G45660	27.805	205	131	5	7	211	367	554	1.17e-18	84.3
MS.gene54407.t1	AT3G45660	27.805	205	131	5	7	211	367	554	1.17e-18	84.3
MS.gene54407.t1	AT3G45660	27.805	205	131	5	7	211	388	575	1.19e-18	84.3
MS.gene54407.t1	AT5G11570	29.630	189	119	3	3	191	302	476	7.40e-18	82.0
MS.gene54407.t1	AT5G28470	28.889	180	116	5	13	191	383	551	2.65e-17	80.5
MS.gene54407.t1	AT3G45680	26.344	186	117	4	22	207	390	555	2.83e-17	80.1
MS.gene54407.t1	AT3G45710	27.128	188	114	6	22	205	391	559	6.61e-17	79.3
MS.gene54407.t1	AT3G45720	29.032	186	110	7	9	194	377	540	2.52e-16	77.4
MS.gene54407.t1	AT3G45700	26.000	200	122	6	9	204	369	546	3.39e-15	74.3
MS.gene54407.t1	AT3G45650	25.000	228	125	6	7	208	368	575	3.81e-15	73.9

Find 0 sgRNAs with CRISPR-Local

Find 37 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTGATTCAATATTGCTTAAT+TGG	-	50633:10952-10971	MS.gene54407:CDS	20.0%
!!!	GAACATTAAACTTGATAATT+TGG	-	50633:11299-11318	MS.gene54407:CDS	20.0%
!	AACCAATAAGCACTTAAATT+TGG	+	50633:10931-10950	None:intergenic	25.0%
!!	TTGATAATTTGGCAAACAAT+GGG	-	50633:11310-11329	MS.gene54407:CDS	25.0%
!!	TTTAGGAGTTTCGATTTTAT+CGG	-	50633:10822-10841	MS.gene54407:CDS	25.0%
!!!	CAAGTTTGATTACTTTTACT+GGG	-	50633:11185-11204	MS.gene54407:CDS	25.0%
	CAGATAAAAGACAAGAATCT+TGG	-	50633:11139-11158	MS.gene54407:CDS	30.0%
	CTAATATGAGGAATACACTT+AGG	+	50633:10714-10733	None:intergenic	30.0%
	TAAGCACTTAAATTTGGCAT+TGG	+	50633:10925-10944	None:intergenic	30.0%
	TGCCAAATTTAAGTGCTTAT+TGG	-	50633:10926-10945	MS.gene54407:CDS	30.0%
!	CAAAGAATTGGAATTGGTTT+AGG	-	50633:10805-10824	MS.gene54407:CDS	30.0%
!	CTTGATAATTTGGCAAACAA+TGG	-	50633:11309-11328	MS.gene54407:CDS	30.0%
!	TCTTTTATCTGAATTTCCAG+AGG	+	50633:11130-11149	None:intergenic	30.0%
!!	GCAAGTTTGATTACTTTTAC+TGG	-	50633:11184-11203	MS.gene54407:CDS	30.0%
!!!	ATTTTGCATTGTTGGTTTGT+TGG	-	50633:10987-11006	MS.gene54407:CDS	30.0%
	CAGCACATAGATACAAATAC+AGG	-	50633:11253-11272	MS.gene54407:CDS	35.0%
	CAGCTTCAAAGAATTGGAAT+TGG	-	50633:10799-10818	MS.gene54407:CDS	35.0%
	GACACAACATGTTTATGAGA+TGG	-	50633:11275-11294	MS.gene54407:CDS	35.0%
	GGTAATAGAGAGCTAATATG+AGG	+	50633:10726-10745	None:intergenic	35.0%
	TGAAAAGCGGTACAAAAGTT+TGG	+	50633:10747-10766	None:intergenic	35.0%
	TTGTCTCAAAACATCAACAC+TGG	-	50633:11162-11181	MS.gene54407:CDS	35.0%
!	CCAATACTTTTCATAGCATC+AGG	+	50633:11033-11052	None:intergenic	35.0%
!	CCTGATGCTATGAAAAGTAT+TGG	-	50633:11030-11049	MS.gene54407:CDS	35.0%
!!	GCTGAAGTATTTTGCATTGT+TGG	-	50633:10979-10998	MS.gene54407:CDS	35.0%
!!	TTCGATTTTATCGGTTGCTT+GGG	-	50633:10831-10850	MS.gene54407:CDS	35.0%
!!	TTTCGATTTTATCGGTTGCT+TGG	-	50633:10830-10849	MS.gene54407:CDS	35.0%
	GCATCTCAGCTTCAAAGAAT+TGG	-	50633:10793-10812	MS.gene54407:CDS	40.0%
!	AGTGTTGTTAAATCAGCCTC+TGG	-	50633:11111-11130	MS.gene54407:CDS	40.0%
	ACACTTAGGCCTGGAAAAAC+CGG	+	50633:10700-10719	None:intergenic	45.0%
	ATGAGGAATACACTTAGGCC+TGG	+	50633:10709-10728	None:intergenic	45.0%
	CCAGTGATGCGTTTGAAAAG+CGG	+	50633:10760-10779	None:intergenic	45.0%
!!	TCTGCTTATGCTGCTTTAGC+TGG	-	50633:11054-11073	MS.gene54407:CDS	45.0%
	TGAAGCTGAGATGCACCATG+CGG	+	50633:10787-10806	None:intergenic	50.0%
!!	CCGCTTTTCAAACGCATCAC+TGG	-	50633:10757-10776	MS.gene54407:CDS	50.0%
!!	GCTGCTTTAGCTGGTGGATT+AGG	-	50633:11063-11082	MS.gene54407:CDS	50.0%
!!	GCTTATGCTGCTTTAGCTGG+TGG	-	50633:11057-11076	MS.gene54407:CDS	50.0%
	CGCATCACTGGTCATCCGCA+TGG	-	50633:10769-10788	MS.gene54407:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
50633	gene	10694	11356	10694	ID=MS.gene54407
50633	mRNA	10694	11356	10694	ID=MS.gene54407.t1;Parent=MS.gene54407
50633	exon	10694	11356	10694	ID=MS.gene54407.t1.exon1;Parent=MS.gene54407.t1
50633	CDS	10694	11356	10694	ID=cds.MS.gene54407.t1;Parent=MS.gene54407.t1

Gene Sequence

>MS.gene54407

ATGCCGGTTTTTCCAGGCCTAAGTGTATTCCTCATATTAGCTCTCTATTACCAAACTTTTGTACCGCTTTTCAAACGCATCACTGGTCATCCGCATGGTGCATCTCAGCTTCAAAGAATTGGAATTGGTTTAGGAGTTTCGATTTTATCGGTTGCTTGGGCTGCTATCTTCGAAAAGTATAGAAGAAACTATGCTATCAAAAATGAATATGAAGCTAGTTTCTTAACACCAATGCCAAATTTAAGTGCTTATTGGTTATTGATTCAATATTGCTTAATTGGTGTAGCTGAAGTATTTTGCATTGTTGGTTTGTTGGAGTTTTTATATGAAGAAGCACCTGATGCTATGAAAAGTATTGGTTCTGCTTATGCTGCTTTAGCTGGTGGATTAGGTTGTTTTTTTGCAACATTTATAAATAGTGTTGTTAAATCAGCCTCTGGAAATTCAGATAAAAGACAAGAATCTTGGTTGTCTCAAAACATCAACACTGGCAAGTTTGATTACTTTTACTGGGTTCTTACAGCTTTAAGCTTAGTCAACTTCTGTGTCTTCTTATATTCAGCACATAGATACAAATACAGGACACAACATGTTTATGAGATGGAGAACATTAAACTTGATAATTTGGCAAACAATGGGAGCTCTACAACAGTTTCTTTCTAG

Protein sequence

>MS.gene54407.t1

MPVFPGLSVFLILALYYQTFVPLFKRITGHPHGASQLQRIGIGLGVSILSVAWAAIFEKYRRNYAIKNEYEASFLTPMPNLSAYWLLIQYCLIGVAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFFATFINSVVKSASGNSDKRQESWLSQNINTGKFDYFYWVLTALSLVNFCVFLYSAHRYKYRTQHVYEMENIKLDNLANNGSSTTVSF