Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58627.t1 | XP_013463310.1 | 98.7 | 153 | 2 | 0 | 1 | 153 | 1 | 153 | 1.20E-71 | 279.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58627.t1 | Q96262 | 66.2 | 148 | 49 | 1 | 1 | 148 | 1 | 147 | 1.8e-44 | 180.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58627.t1 | B7FH09 | 98.7 | 153 | 2 | 0 | 1 | 153 | 1 | 153 | 8.5e-72 | 279.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene58627 | 0.808556 | 2.92E-50 | -1.69E-46 |
MS.gene049254 | MS.gene58627 | 0.825753 | 3.95E-54 | -1.69E-46 |
MS.gene049283 | MS.gene58627 | 0.835137 | 2.00E-56 | -1.69E-46 |
MS.gene049452 | MS.gene58627 | 0.831608 | 1.52E-55 | -1.69E-46 |
MS.gene049499 | MS.gene58627 | 0.830293 | 3.19E-55 | -1.69E-46 |
MS.gene049801 | MS.gene58627 | 0.818071 | 2.37E-52 | -1.69E-46 |
MS.gene049983 | MS.gene58627 | 0.868957 | 4.44E-66 | -1.69E-46 |
MS.gene050359 | MS.gene58627 | 0.808791 | 2.60E-50 | -1.69E-46 |
MS.gene050414 | MS.gene58627 | 0.802328 | 5.91E-49 | -1.69E-46 |
MS.gene050646 | MS.gene58627 | 0.807648 | 4.56E-50 | -1.69E-46 |
MS.gene050654 | MS.gene58627 | 0.83869 | 2.48E-57 | -1.69E-46 |
MS.gene050737 | MS.gene58627 | 0.845636 | 3.59E-59 | -1.69E-46 |
MS.gene050759 | MS.gene58627 | 0.833038 | 6.71E-56 | -1.69E-46 |
MS.gene050941 | MS.gene58627 | 0.840784 | 7.06E-58 | -1.69E-46 |
MS.gene050962 | MS.gene58627 | 0.82341 | 1.41E-53 | -1.69E-46 |
MS.gene051184 | MS.gene58627 | 0.814195 | 1.74E-51 | -1.69E-46 |
MS.gene051198 | MS.gene58627 | 0.807439 | 5.05E-50 | -1.69E-46 |
MS.gene051275 | MS.gene58627 | 0.818665 | 1.74E-52 | -1.69E-46 |
MS.gene051541 | MS.gene58627 | 0.828274 | 9.85E-55 | -1.69E-46 |
MS.gene051800 | MS.gene58627 | 0.807921 | 3.99E-50 | -1.69E-46 |
MS.gene051852 | MS.gene58627 | 0.81916 | 1.34E-52 | -1.69E-46 |
MS.gene052016 | MS.gene58627 | 0.824085 | 9.77E-54 | -1.69E-46 |
MS.gene052037 | MS.gene58627 | 0.814432 | 1.55E-51 | -1.69E-46 |
MS.gene052118 | MS.gene58627 | 0.853268 | 2.67E-61 | -1.69E-46 |
MS.gene05216 | MS.gene58627 | 0.806613 | 7.56E-50 | -1.69E-46 |
MS.gene052307 | MS.gene58627 | 0.81501 | 1.15E-51 | -1.69E-46 |
MS.gene052463 | MS.gene58627 | 0.82783 | 1.26E-54 | -1.69E-46 |
MS.gene052493 | MS.gene58627 | 0.810712 | 1.01E-50 | -1.69E-46 |
MS.gene052674 | MS.gene58627 | 0.829711 | 4.42E-55 | -1.69E-46 |
MS.gene052675 | MS.gene58627 | 0.833153 | 6.28E-56 | -1.69E-46 |
MS.gene052677 | MS.gene58627 | 0.831209 | 1.90E-55 | -1.69E-46 |
MS.gene053079 | MS.gene58627 | 0.807988 | 3.86E-50 | -1.69E-46 |
MS.gene053456 | MS.gene58627 | 0.807573 | 4.73E-50 | -1.69E-46 |
MS.gene05350 | MS.gene58627 | 0.802665 | 5.04E-49 | -1.69E-46 |
MS.gene053575 | MS.gene58627 | 0.822812 | 1.94E-53 | -1.69E-46 |
MS.gene053726 | MS.gene58627 | 0.826007 | 3.43E-54 | -1.69E-46 |
MS.gene054178 | MS.gene58627 | 0.806385 | 8.44E-50 | -1.69E-46 |
MS.gene054479 | MS.gene58627 | 0.826258 | 2.99E-54 | -1.69E-46 |
MS.gene054489 | MS.gene58627 | 0.816956 | 4.23E-52 | -1.69E-46 |
MS.gene054641 | MS.gene58627 | 0.801085 | 1.06E-48 | -1.69E-46 |
MS.gene054651 | MS.gene58627 | 0.831278 | 1.83E-55 | -1.69E-46 |
MS.gene054892 | MS.gene58627 | 0.841822 | 3.76E-58 | -1.69E-46 |
MS.gene054893 | MS.gene58627 | 0.846684 | 1.86E-59 | -1.69E-46 |
MS.gene055513 | MS.gene58627 | 0.803308 | 3.71E-49 | -1.69E-46 |
MS.gene055724 | MS.gene58627 | 0.81465 | 1.38E-51 | -1.69E-46 |
MS.gene055864 | MS.gene58627 | 0.813959 | 1.97E-51 | -1.69E-46 |
MS.gene056480 | MS.gene58627 | 0.827344 | 1.65E-54 | -1.69E-46 |
MS.gene056677 | MS.gene58627 | 0.817509 | 3.18E-52 | -1.69E-46 |
MS.gene056699 | MS.gene58627 | 0.865116 | 7.46E-65 | -1.69E-46 |
MS.gene056776 | MS.gene58627 | 0.808652 | 2.79E-50 | -1.69E-46 |
MS.gene056831 | MS.gene58627 | 0.811175 | 7.99E-51 | -1.69E-46 |
MS.gene05686 | MS.gene58627 | 0.809872 | 1.53E-50 | -1.69E-46 |
MS.gene057034 | MS.gene58627 | 0.80785 | 4.13E-50 | -1.69E-46 |
MS.gene057155 | MS.gene58627 | 0.809049 | 2.29E-50 | -1.69E-46 |
MS.gene057208 | MS.gene58627 | 0.829908 | 3.95E-55 | -1.69E-46 |
MS.gene057371 | MS.gene58627 | 0.811684 | 6.19E-51 | -1.69E-46 |
MS.gene057919 | MS.gene58627 | 0.800973 | 1.12E-48 | -1.69E-46 |
MS.gene058008 | MS.gene58627 | 0.803642 | 3.16E-49 | -1.69E-46 |
MS.gene058009 | MS.gene58627 | 0.800729 | 1.26E-48 | -1.69E-46 |
MS.gene058010 | MS.gene58627 | 0.832098 | 1.15E-55 | -1.69E-46 |
MS.gene058095 | MS.gene58627 | 0.800295 | 1.54E-48 | -1.69E-46 |
MS.gene058159 | MS.gene58627 | 0.828793 | 7.38E-55 | -1.69E-46 |
MS.gene058223 | MS.gene58627 | -0.805527 | 1.28E-49 | -1.69E-46 |
MS.gene058279 | MS.gene58627 | 0.806185 | 9.30E-50 | -1.69E-46 |
MS.gene058429 | MS.gene58627 | 0.856631 | 2.82E-62 | -1.69E-46 |
MS.gene058520 | MS.gene58627 | 0.811083 | 8.36E-51 | -1.69E-46 |
MS.gene058592 | MS.gene58627 | 0.801385 | 9.23E-49 | -1.69E-46 |
MS.gene058781 | MS.gene58627 | 0.822423 | 2.39E-53 | -1.69E-46 |
MS.gene058783 | MS.gene58627 | 0.804579 | 2.02E-49 | -1.69E-46 |
MS.gene059170 | MS.gene58627 | 0.814408 | 1.56E-51 | -1.69E-46 |
MS.gene059283 | MS.gene58627 | 0.80867 | 2.76E-50 | -1.69E-46 |
MS.gene05952 | MS.gene58627 | 0.832777 | 7.79E-56 | -1.69E-46 |
MS.gene059965 | MS.gene58627 | 0.810203 | 1.30E-50 | -1.69E-46 |
MS.gene060011 | MS.gene58627 | 0.805988 | 1.02E-49 | -1.69E-46 |
MS.gene060259 | MS.gene58627 | 0.818515 | 1.88E-52 | -1.69E-46 |
MS.gene060522 | MS.gene58627 | 0.817851 | 2.66E-52 | -1.69E-46 |
MS.gene060527 | MS.gene58627 | 0.812291 | 4.57E-51 | -1.69E-46 |
MS.gene06052 | MS.gene58627 | 0.871858 | 4.96E-67 | -1.69E-46 |
MS.gene060777 | MS.gene58627 | 0.82336 | 1.44E-53 | -1.69E-46 |
MS.gene060840 | MS.gene58627 | 0.806887 | 6.61E-50 | -1.69E-46 |
MS.gene060932 | MS.gene58627 | 0.875537 | 2.85E-68 | -1.69E-46 |
MS.gene060935 | MS.gene58627 | 0.820191 | 7.81E-53 | -1.69E-46 |
MS.gene060937 | MS.gene58627 | 0.832176 | 1.10E-55 | -1.69E-46 |
MS.gene061100 | MS.gene58627 | 0.825458 | 4.64E-54 | -1.69E-46 |
MS.gene061160 | MS.gene58627 | 0.802945 | 4.41E-49 | -1.69E-46 |
MS.gene06121 | MS.gene58627 | 0.839568 | 1.47E-57 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58627.t1 | MTR_2g437530 | 98.131 | 214 | 4 | 0 | 1 | 214 | 1 | 214 | 9.34e-141 | 392 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58627.t1 | AT4G20260 | 61.326 | 181 | 58 | 2 | 1 | 171 | 1 | 179 | 3.59e-55 | 176 |
MS.gene58627.t1 | AT4G20260 | 61.326 | 181 | 58 | 2 | 1 | 171 | 1 | 179 | 3.59e-55 | 176 |
MS.gene58627.t1 | AT4G20260 | 61.326 | 181 | 58 | 2 | 1 | 171 | 1 | 179 | 3.59e-55 | 176 |
MS.gene58627.t1 | AT4G20260 | 61.326 | 181 | 58 | 2 | 1 | 171 | 1 | 179 | 3.59e-55 | 176 |
MS.gene58627.t1 | AT4G20260 | 61.326 | 181 | 58 | 2 | 1 | 171 | 1 | 179 | 3.59e-55 | 176 |
MS.gene58627.t1 | AT4G20260 | 61.326 | 181 | 58 | 2 | 1 | 171 | 1 | 179 | 3.59e-55 | 176 |
MS.gene58627.t1 | AT4G20260 | 61.326 | 181 | 58 | 2 | 1 | 171 | 1 | 179 | 3.59e-55 | 176 |
MS.gene58627.t1 | AT4G20260 | 68.243 | 148 | 43 | 2 | 1 | 145 | 1 | 147 | 4.78e-54 | 171 |
MS.gene58627.t1 | AT4G20260 | 67.857 | 140 | 45 | 0 | 1 | 140 | 1 | 140 | 1.34e-53 | 169 |
MS.gene58627.t1 | AT4G20260 | 60.989 | 182 | 58 | 3 | 1 | 171 | 1 | 180 | 1.86e-53 | 171 |
Find 35 sgRNAs with CRISPR-Local
Find 61 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATAGAAGAACTTGTTAAAAT+TGG | 0.213794 | 2.3:+54142939 | MS.gene58627:CDS |
AGTTGTTGAAGAAGAGAAAA+AGG | 0.260064 | 2.3:+54143236 | MS.gene58627:CDS |
TTTGGACCAGCCTTAGTTTC+AGG | 0.262260 | 2.3:+54143087 | MS.gene58627:CDS |
TCCTCCTCCCGCGGAGAAAC+AGG | 0.321981 | 2.3:+54143326 | MS.gene58627:CDS |
TCAACAAACTTTCAAGCCTT+TGG | 0.364448 | 2.3:-54143393 | None:intergenic |
CTTTGACTCATCAAAGGTCT+TGG | 0.366152 | 2.3:-54142300 | None:intergenic |
GGAAGCAAAAGATGGGTTAC+TGG | 0.373360 | 2.3:+54142201 | None:intergenic |
TCCTGTTTCTCCGCGGGAGG+AGG | 0.385073 | 2.3:-54143327 | None:intergenic |
TCTGAAGCATCATCCAAGTT+TGG | 0.412649 | 2.3:+54143069 | MS.gene58627:CDS |
AATTGAATCTTCTGCAGAAA+AGG | 0.424490 | 2.3:+54143275 | MS.gene58627:CDS |
TGCAGAAAAGGTTGAAGAAA+AGG | 0.428765 | 2.3:+54143287 | MS.gene58627:CDS |
GAAAACTGGACCTGAAACTA+AGG | 0.436909 | 2.3:-54143097 | None:intergenic |
GGGAATCAATAAAGAGTTTG+AGG | 0.437077 | 2.3:+54142497 | MS.gene58627:CDS |
AACTAAGGCTGGTCCAAACT+TGG | 0.441827 | 2.3:-54143082 | None:intergenic |
TCAACCGCAGCTGGTTCAAC+CGG | 0.454197 | 2.3:-54143357 | None:intergenic |
TCTACTTGTTCAACCGCAGC+TGG | 0.464029 | 2.3:-54143366 | None:intergenic |
TTCTCCGCGGGAGGAGGAGC+CGG | 0.468573 | 2.3:-54143321 | None:intergenic |
CAAGACCTTTGATGAGTCAA+AGG | 0.477303 | 2.3:+54142301 | MS.gene58627:CDS |
AGCATCTTCAACTGAAATCA+AGG | 0.494963 | 2.3:+54142563 | MS.gene58627:CDS |
TCCTCCTGTTTCTCCGCGGG+AGG | 0.496545 | 2.3:-54143330 | None:intergenic |
AGAAAAGGATGCAGCTGAGC+CGG | 0.507989 | 2.3:+54143302 | MS.gene58627:CDS |
ACAAACTTTCAAGCCTTTGG+TGG | 0.520637 | 2.3:-54143390 | None:intergenic |
GTCAAAGAACGTGATGTAGC+AGG | 0.529799 | 2.3:+54142882 | MS.gene58627:CDS |
GGTTCTTCCCAAGATCAAGA+AGG | 0.544230 | 2.3:+54142232 | MS.gene58627:CDS |
AAACAAGTGGTGTTAAAGAG+AGG | 0.557539 | 2.3:+54143208 | MS.gene58627:CDS |
TAAGAAAACAGCTGCTGCTG+AGG | 0.571062 | 2.3:+54142274 | MS.gene58627:CDS |
AACAAGTGGTGTTAAAGAGA+GGG | 0.574339 | 2.3:+54143209 | MS.gene58627:CDS |
ACAAACCTTTGACTCATCAA+AGG | 0.584760 | 2.3:-54142306 | None:intergenic |
TCCTCCCGCGGAGAAACAGG+AGG | 0.602952 | 2.3:+54143329 | MS.gene58627:CDS |
ACTGGACCTGAAACTAAGGC+TGG | 0.610443 | 2.3:-54143093 | None:intergenic |
AAAACAGAAGATGAAACAAG+TGG | 0.618986 | 2.3:+54143195 | MS.gene58627:CDS |
TGAGCCGGCTCCTCCTCCCG+CGG | 0.659003 | 2.3:+54143317 | MS.gene58627:CDS |
TGAACAAGTAGAACCACCAA+AGG | 0.665776 | 2.3:+54143377 | MS.gene58627:CDS |
GATGGGTTACTGGACAACAA+AGG | 0.677203 | 2.3:+54142211 | None:intergenic |
AAAACCGGTTGAACCAGCTG+CGG | 0.690812 | 2.3:+54143353 | MS.gene58627:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGCAAAAAATATATGTATA+TGG | + | chr2.3:54142681-54142700 | MS.gene58627:intron | 15.0% |
!! | TCTTCAAAAATAAACAAATA+AGG | - | chr2.3:54142990-54143009 | None:intergenic | 15.0% |
!!! | TTTGCTTTTATATTTTGTTA+CGG | - | chr2.3:54142668-54142687 | None:intergenic | 15.0% |
!! | AAGTAAAAATATCATGTATG+TGG | - | chr2.3:54142764-54142783 | None:intergenic | 20.0% |
!! | AATAGTTCATATATTTGATG+TGG | + | chr2.3:54142455-54142474 | MS.gene58627:intron | 20.0% |
!!! | ATAGAAGAACTTGTTAAAAT+TGG | + | chr2.3:54142939-54142958 | MS.gene58627:CDS | 20.0% |
!!! | ATATATATTTCAGATTTTCC+TGG | + | chr2.3:54143033-54143052 | MS.gene58627:intron | 20.0% |
!!! | GTAAAGTATTTATAGTTTTC+CGG | + | chr2.3:54142961-54142980 | MS.gene58627:intron | 20.0% |
!!! | TGAAAATTTTCCATCAATAT+TGG | - | chr2.3:54142841-54142860 | None:intergenic | 20.0% |
! | AAATAAACAAATAAGGTTGC+CGG | - | chr2.3:54142983-54143002 | None:intergenic | 25.0% |
! | ACATGTATCTGGTTAAAATT+TGG | + | chr2.3:54142737-54142756 | MS.gene58627:intron | 25.0% |
! | CATGTATCTGGTTAAAATTT+GGG | + | chr2.3:54142738-54142757 | MS.gene58627:intron | 25.0% |
! | TTCATATATTTGATGTGGTT+CGG | + | chr2.3:54142460-54142479 | MS.gene58627:intron | 25.0% |
! | TTCTCAAAAACAAAGAAAAC+TGG | - | chr2.3:54143114-54143133 | None:intergenic | 25.0% |
!! | CTTTTATATTTTGTTACGGA+GGG | - | chr2.3:54142664-54142683 | None:intergenic | 25.0% |
!!! | AGTTTTCTTTGTTTTTGAGA+AGG | + | chr2.3:54143113-54143132 | MS.gene58627:CDS | 25.0% |
AAAACAGAAGATGAAACAAG+TGG | + | chr2.3:54143195-54143214 | MS.gene58627:CDS | 30.0% | |
AATATCACCTTTACAGAGTT+TGG | + | chr2.3:54142860-54142879 | MS.gene58627:intron | 30.0% | |
AATTGAATCTTCTGCAGAAA+AGG | + | chr2.3:54143275-54143294 | MS.gene58627:CDS | 30.0% | |
AGTTGTTGAAGAAGAGAAAA+AGG | + | chr2.3:54143236-54143255 | MS.gene58627:CDS | 30.0% | |
GAAAAAGACACCAATATTGA+TGG | + | chr2.3:54142828-54142847 | MS.gene58627:intron | 30.0% | |
TCAAAAACCTTCTTGATCTT+GGG | - | chr2.3:54142242-54142261 | None:intergenic | 30.0% | |
TTAGACTAGATACATGTATC+TGG | + | chr2.3:54142726-54142745 | MS.gene58627:intron | 30.0% | |
! | GCTTTTATATTTTGTTACGG+AGG | - | chr2.3:54142665-54142684 | None:intergenic | 30.0% |
ACAAACCTTTGACTCATCAA+AGG | - | chr2.3:54142309-54142328 | None:intergenic | 35.0% | |
AGCATCTTCAACTGAAATCA+AGG | + | chr2.3:54142563-54142582 | MS.gene58627:CDS | 35.0% | |
CTCAAAAACCTTCTTGATCT+TGG | - | chr2.3:54142243-54142262 | None:intergenic | 35.0% | |
GGGAATCAATAAAGAGTTTG+AGG | + | chr2.3:54142497-54142516 | MS.gene58627:CDS | 35.0% | |
TCTTTGACCAAACTCTGTAA+AGG | - | chr2.3:54142870-54142889 | None:intergenic | 35.0% | |
TGCAGAAAAGGTTGAAGAAA+AGG | + | chr2.3:54143287-54143306 | MS.gene58627:CDS | 35.0% | |
! | AAACAAGTGGTGTTAAAGAG+AGG | + | chr2.3:54143208-54143227 | MS.gene58627:CDS | 35.0% |
! | AACAAGTGGTGTTAAAGAGA+GGG | + | chr2.3:54143209-54143228 | MS.gene58627:CDS | 35.0% |
!! | GTTCGGTATTTTGTTTAGGA+GGG | + | chr2.3:54142477-54142496 | MS.gene58627:intron | 35.0% |
!!! | GTTTTTGTTTCTGTAGTAGC+AGG | - | chr2.3:54143180-54143199 | None:intergenic | 35.0% |
!!! | TGTGGTTCGGTATTTTGTTT+AGG | + | chr2.3:54142473-54142492 | MS.gene58627:intron | 35.0% |
CAAGACCTTTGATGAGTCAA+AGG | + | chr2.3:54142301-54142320 | MS.gene58627:CDS | 40.0% | |
CTTTGACTCATCAAAGGTCT+TGG | - | chr2.3:54142303-54142322 | None:intergenic | 40.0% | |
GAAAACTGGACCTGAAACTA+AGG | - | chr2.3:54143100-54143119 | None:intergenic | 40.0% | |
TGAACAAGTAGAACCACCAA+AGG | + | chr2.3:54143377-54143396 | MS.gene58627:CDS | 40.0% | |
! | TCTGAAGCATCATCCAAGTT+TGG | + | chr2.3:54143069-54143088 | MS.gene58627:CDS | 40.0% |
!! | GGTTCGGTATTTTGTTTAGG+AGG | + | chr2.3:54142476-54142495 | MS.gene58627:intron | 40.0% |
!! | TCAGATACTGCTTTTGATCC+AGG | - | chr2.3:54143054-54143073 | None:intergenic | 40.0% |
GGAGAAACAGGAGGAAAAAC+CGG | + | chr2.3:54143338-54143357 | MS.gene58627:CDS | 45.0% | |
GGTTCTTCCCAAGATCAAGA+AGG | + | chr2.3:54142232-54142251 | MS.gene58627:CDS | 45.0% | |
GTCAAAGAACGTGATGTAGC+AGG | + | chr2.3:54142882-54142901 | MS.gene58627:CDS | 45.0% | |
TAAGAAAACAGCTGCTGCTG+AGG | + | chr2.3:54142274-54142293 | MS.gene58627:CDS | 45.0% | |
TTTGGACCAGCCTTAGTTTC+AGG | + | chr2.3:54143087-54143106 | MS.gene58627:CDS | 45.0% | |
! | AACTAAGGCTGGTCCAAACT+TGG | - | chr2.3:54143085-54143104 | None:intergenic | 45.0% |
!! | TTTTTCCTCCTGTTTCTCCG+CGG | - | chr2.3:54143337-54143356 | None:intergenic | 45.0% |
AAAACCGGTTGAACCAGCTG+CGG | + | chr2.3:54143353-54143372 | MS.gene58627:CDS | 50.0% | |
ACTGGACCTGAAACTAAGGC+TGG | - | chr2.3:54143096-54143115 | None:intergenic | 50.0% | |
AGAAAAGGATGCAGCTGAGC+CGG | + | chr2.3:54143302-54143321 | MS.gene58627:CDS | 50.0% | |
TCTACTTGTTCAACCGCAGC+TGG | - | chr2.3:54143369-54143388 | None:intergenic | 50.0% | |
!! | TTTTCCTCCTGTTTCTCCGC+GGG | - | chr2.3:54143336-54143355 | None:intergenic | 50.0% |
! | TCAACCGCAGCTGGTTCAAC+CGG | - | chr2.3:54143360-54143379 | None:intergenic | 55.0% |
TCCTCCCGCGGAGAAACAGG+AGG | + | chr2.3:54143329-54143348 | MS.gene58627:CDS | 65.0% | |
TCCTCCTCCCGCGGAGAAAC+AGG | + | chr2.3:54143326-54143345 | MS.gene58627:CDS | 65.0% | |
! | TCCTCCTGTTTCTCCGCGGG+AGG | - | chr2.3:54143333-54143352 | None:intergenic | 65.0% |
! | TCCTGTTTCTCCGCGGGAGG+AGG | - | chr2.3:54143330-54143349 | None:intergenic | 65.0% |
TTCTCCGCGGGAGGAGGAGC+CGG | - | chr2.3:54143324-54143343 | None:intergenic | 70.0% | |
! | TGAGCCGGCTCCTCCTCCCG+CGG | + | chr2.3:54143317-54143336 | MS.gene58627:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 54142212 | 54143404 | 54142212 | ID=MS.gene58627 |
chr2.3 | mRNA | 54142212 | 54143404 | 54142212 | ID=MS.gene58627.t1;Parent=MS.gene58627 |
chr2.3 | exon | 54142212 | 54142322 | 54142212 | ID=MS.gene58627.t1.exon1;Parent=MS.gene58627.t1 |
chr2.3 | CDS | 54142212 | 54142322 | 54142212 | ID=cds.MS.gene58627.t1;Parent=MS.gene58627.t1 |
chr2.3 | exon | 54142495 | 54142584 | 54142495 | ID=MS.gene58627.t1.exon2;Parent=MS.gene58627.t1 |
chr2.3 | CDS | 54142495 | 54142584 | 54142495 | ID=cds.MS.gene58627.t1;Parent=MS.gene58627.t1 |
chr2.3 | exon | 54142876 | 54142960 | 54142876 | ID=MS.gene58627.t1.exon3;Parent=MS.gene58627.t1 |
chr2.3 | CDS | 54142876 | 54142960 | 54142876 | ID=cds.MS.gene58627.t1;Parent=MS.gene58627.t1 |
chr2.3 | exon | 54143046 | 54143404 | 54143046 | ID=MS.gene58627.t1.exon4;Parent=MS.gene58627.t1 |
chr2.3 | CDS | 54143046 | 54143404 | 54143046 | ID=cds.MS.gene58627.t1;Parent=MS.gene58627.t1 |
Gene Sequence |
Protein sequence |