Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70297.t1 | XP_003630134.1 | 97.8 | 645 | 11 | 2 | 1 | 642 | 1 | 645 | 0.00E+00 | 1275.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70297.t1 | Q6H6N5 | 76.6 | 560 | 114 | 3 | 84 | 642 | 63 | 606 | 4.7e-258 | 891.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70297.t1 | G7LBD0 | 97.8 | 645 | 11 | 2 | 1 | 642 | 1 | 645 | 0.0e+00 | 1275.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049222 | MS.gene70297 | 0.818769 | 1.65E-52 | -1.69E-46 |
| MS.gene049356 | MS.gene70297 | 0.878039 | 3.88E-69 | -1.69E-46 |
| MS.gene049369 | MS.gene70297 | 0.888551 | 5.34E-73 | -1.69E-46 |
| MS.gene049396 | MS.gene70297 | 0.818948 | 1.50E-52 | -1.69E-46 |
| MS.gene049633 | MS.gene70297 | 0.809595 | 1.75E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene70297 | 0.819113 | 1.38E-52 | -1.69E-46 |
| MS.gene050083 | MS.gene70297 | -0.811529 | 6.69E-51 | -1.69E-46 |
| MS.gene050444 | MS.gene70297 | 0.813627 | 2.33E-51 | -1.69E-46 |
| MS.gene050553 | MS.gene70297 | 0.843936 | 1.03E-58 | -1.69E-46 |
| MS.gene050747 | MS.gene70297 | 0.825481 | 4.58E-54 | -1.69E-46 |
| MS.gene050772 | MS.gene70297 | 0.803396 | 3.56E-49 | -1.69E-46 |
| MS.gene05080 | MS.gene70297 | 0.832376 | 9.79E-56 | -1.69E-46 |
| MS.gene050868 | MS.gene70297 | 0.809851 | 1.54E-50 | -1.69E-46 |
| MS.gene050871 | MS.gene70297 | 0.808973 | 2.38E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene70297 | 0.805968 | 1.03E-49 | -1.69E-46 |
| MS.gene051360 | MS.gene70297 | 0.800055 | 1.72E-48 | -1.69E-46 |
| MS.gene051666 | MS.gene70297 | 0.821418 | 4.08E-53 | -1.69E-46 |
| MS.gene051734 | MS.gene70297 | 0.835857 | 1.31E-56 | -1.69E-46 |
| MS.gene051838 | MS.gene70297 | 0.825417 | 4.74E-54 | -1.69E-46 |
| MS.gene051874 | MS.gene70297 | 0.841731 | 3.98E-58 | -1.69E-46 |
| MS.gene052136 | MS.gene70297 | 0.819027 | 1.44E-52 | -1.69E-46 |
| MS.gene052164 | MS.gene70297 | 0.823254 | 1.53E-53 | -1.69E-46 |
| MS.gene052188 | MS.gene70297 | 0.83542 | 1.70E-56 | -1.69E-46 |
| MS.gene052414 | MS.gene70297 | 0.843264 | 1.56E-58 | -1.69E-46 |
| MS.gene052421 | MS.gene70297 | 0.802774 | 4.78E-49 | -1.69E-46 |
| MS.gene052484 | MS.gene70297 | 0.805671 | 1.19E-49 | -1.69E-46 |
| MS.gene052870 | MS.gene70297 | 0.814123 | 1.81E-51 | -1.69E-46 |
| MS.gene052872 | MS.gene70297 | 0.818829 | 1.60E-52 | -1.69E-46 |
| MS.gene052966 | MS.gene70297 | 0.81593 | 7.18E-52 | -1.69E-46 |
| MS.gene053449 | MS.gene70297 | 0.858542 | 7.67E-63 | -1.69E-46 |
| MS.gene053626 | MS.gene70297 | 0.80371 | 3.06E-49 | -1.69E-46 |
| MS.gene053632 | MS.gene70297 | 0.810418 | 1.16E-50 | -1.69E-46 |
| MS.gene053824 | MS.gene70297 | 0.845142 | 4.88E-59 | -1.69E-46 |
| MS.gene053912 | MS.gene70297 | 0.887643 | 1.19E-72 | -1.69E-46 |
| MS.gene053916 | MS.gene70297 | 0.840535 | 8.20E-58 | -1.69E-46 |
| MS.gene054408 | MS.gene70297 | 0.805352 | 1.39E-49 | -1.69E-46 |
| MS.gene05494 | MS.gene70297 | 0.858206 | 9.66E-63 | -1.69E-46 |
| MS.gene054955 | MS.gene70297 | 0.81669 | 4.86E-52 | -1.69E-46 |
| MS.gene05505 | MS.gene70297 | 0.828772 | 7.47E-55 | -1.69E-46 |
| MS.gene055224 | MS.gene70297 | 0.81327 | 2.79E-51 | -1.69E-46 |
| MS.gene055539 | MS.gene70297 | 0.832875 | 7.36E-56 | -1.69E-46 |
| MS.gene055722 | MS.gene70297 | 0.81889 | 1.55E-52 | -1.69E-46 |
| MS.gene055741 | MS.gene70297 | 0.824912 | 6.24E-54 | -1.69E-46 |
| MS.gene055744 | MS.gene70297 | 0.820885 | 5.41E-53 | -1.69E-46 |
| MS.gene055748 | MS.gene70297 | 0.802607 | 5.18E-49 | -1.69E-46 |
| MS.gene055750 | MS.gene70297 | 0.81466 | 1.38E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene70297 | 0.814137 | 1.80E-51 | -1.69E-46 |
| MS.gene055909 | MS.gene70297 | 0.829765 | 4.29E-55 | -1.69E-46 |
| MS.gene055911 | MS.gene70297 | 0.826171 | 3.14E-54 | -1.69E-46 |
| MS.gene055941 | MS.gene70297 | 0.828047 | 1.12E-54 | -1.69E-46 |
| MS.gene056166 | MS.gene70297 | 0.825739 | 3.98E-54 | -1.69E-46 |
| MS.gene056283 | MS.gene70297 | 0.831305 | 1.80E-55 | -1.69E-46 |
| MS.gene056387 | MS.gene70297 | 0.818298 | 2.11E-52 | -1.69E-46 |
| MS.gene056422 | MS.gene70297 | 0.828429 | 9.04E-55 | -1.69E-46 |
| MS.gene056449 | MS.gene70297 | 0.800741 | 1.25E-48 | -1.69E-46 |
| MS.gene056511 | MS.gene70297 | 0.825741 | 3.97E-54 | -1.69E-46 |
| MS.gene056609 | MS.gene70297 | 0.801321 | 9.52E-49 | -1.69E-46 |
| MS.gene05664 | MS.gene70297 | 0.827977 | 1.16E-54 | -1.69E-46 |
| MS.gene05666 | MS.gene70297 | 0.813928 | 2.00E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene70297 | 0.826753 | 2.28E-54 | -1.69E-46 |
| MS.gene057086 | MS.gene70297 | 0.823743 | 1.18E-53 | -1.69E-46 |
| MS.gene057537 | MS.gene70297 | 0.832095 | 1.15E-55 | -1.69E-46 |
| MS.gene057734 | MS.gene70297 | 0.871636 | 5.87E-67 | -1.69E-46 |
| MS.gene057856 | MS.gene70297 | 0.809584 | 1.76E-50 | -1.69E-46 |
| MS.gene057926 | MS.gene70297 | 0.814371 | 1.59E-51 | -1.69E-46 |
| MS.gene058007 | MS.gene70297 | 0.817332 | 3.48E-52 | -1.69E-46 |
| MS.gene058090 | MS.gene70297 | 0.809303 | 2.02E-50 | -1.69E-46 |
| MS.gene058120 | MS.gene70297 | 0.89409 | 3.42E-75 | -1.69E-46 |
| MS.gene058444 | MS.gene70297 | 0.810645 | 1.04E-50 | -1.69E-46 |
| MS.gene058448 | MS.gene70297 | 0.830822 | 2.36E-55 | -1.69E-46 |
| MS.gene058700 | MS.gene70297 | 0.802934 | 4.43E-49 | -1.69E-46 |
| MS.gene058838 | MS.gene70297 | 0.81987 | 9.25E-53 | -1.69E-46 |
| MS.gene058928 | MS.gene70297 | 0.829592 | 4.72E-55 | -1.69E-46 |
| MS.gene058948 | MS.gene70297 | 0.850499 | 1.63E-60 | -1.69E-46 |
| MS.gene05913 | MS.gene70297 | 0.824572 | 7.50E-54 | -1.69E-46 |
| MS.gene059305 | MS.gene70297 | 0.822255 | 2.61E-53 | -1.69E-46 |
| MS.gene059366 | MS.gene70297 | 0.824185 | 9.26E-54 | -1.69E-46 |
| MS.gene059367 | MS.gene70297 | 0.805863 | 1.09E-49 | -1.69E-46 |
| MS.gene059368 | MS.gene70297 | 0.8227 | 2.06E-53 | -1.69E-46 |
| MS.gene059455 | MS.gene70297 | 0.801653 | 8.13E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene70297 | 0.802643 | 5.09E-49 | -1.69E-46 |
| MS.gene059674 | MS.gene70297 | 0.847104 | 1.43E-59 | -1.69E-46 |
| MS.gene059711 | MS.gene70297 | 0.816627 | 5.02E-52 | -1.69E-46 |
| MS.gene059717 | MS.gene70297 | 0.800518 | 1.39E-48 | -1.69E-46 |
| MS.gene059801 | MS.gene70297 | 0.80668 | 7.31E-50 | -1.69E-46 |
| MS.gene059807 | MS.gene70297 | 0.840737 | 7.26E-58 | -1.69E-46 |
| MS.gene05986 | MS.gene70297 | 0.830959 | 2.19E-55 | -1.69E-46 |
| MS.gene060762 | MS.gene70297 | 0.823336 | 1.46E-53 | -1.69E-46 |
| MS.gene060818 | MS.gene70297 | 0.840041 | 1.10E-57 | -1.69E-46 |
| MS.gene060835 | MS.gene70297 | 0.802705 | 4.94E-49 | -1.69E-46 |
| MS.gene060837 | MS.gene70297 | 0.849015 | 4.24E-60 | -1.69E-46 |
| MS.gene06097 | MS.gene70297 | 0.865889 | 4.26E-65 | -1.69E-46 |
| MS.gene060981 | MS.gene70297 | 0.829492 | 4.99E-55 | -1.69E-46 |
| MS.gene061041 | MS.gene70297 | 0.844229 | 8.61E-59 | -1.69E-46 |
| MS.gene06111 | MS.gene70297 | 0.803557 | 3.29E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70297.t1 | MTR_8g092170 | 97.829 | 645 | 11 | 2 | 1 | 642 | 1 | 645 | 0.0 | 1304 |
| MS.gene70297.t1 | MTR_1g084610 | 73.362 | 473 | 122 | 2 | 162 | 634 | 113 | 581 | 0.0 | 760 |
| MS.gene70297.t1 | MTR_4g123030 | 68.379 | 506 | 155 | 2 | 133 | 633 | 153 | 658 | 0.0 | 758 |
| MS.gene70297.t1 | MTR_7g111890 | 60.862 | 580 | 210 | 7 | 67 | 642 | 43 | 609 | 0.0 | 733 |
| MS.gene70297.t1 | MTR_4g123030 | 71.867 | 391 | 108 | 1 | 133 | 521 | 153 | 543 | 0.0 | 616 |
| MS.gene70297.t1 | MTR_1g096140 | 56.933 | 476 | 199 | 2 | 144 | 618 | 73 | 543 | 0.0 | 586 |
| MS.gene70297.t1 | MTR_3g117710 | 55.852 | 487 | 209 | 2 | 132 | 618 | 81 | 561 | 0.0 | 583 |
| MS.gene70297.t1 | MTR_1g095970 | 58.515 | 458 | 184 | 2 | 162 | 618 | 89 | 541 | 0.0 | 579 |
| MS.gene70297.t1 | MTR_4g075540 | 53.556 | 450 | 200 | 4 | 121 | 568 | 9 | 451 | 4.84e-172 | 498 |
| MS.gene70297.t1 | MTR_3g015100 | 69.935 | 153 | 46 | 0 | 369 | 521 | 1 | 153 | 1.88e-77 | 243 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70297.t1 | AT5G22510 | 69.753 | 648 | 157 | 8 | 3 | 642 | 1 | 617 | 0.0 | 904 |
| MS.gene70297.t1 | AT5G22510 | 69.753 | 648 | 157 | 8 | 3 | 642 | 1 | 617 | 0.0 | 904 |
| MS.gene70297.t1 | AT1G56560 | 74.348 | 460 | 116 | 1 | 160 | 619 | 132 | 589 | 0.0 | 766 |
| MS.gene70297.t1 | AT3G06500 | 71.162 | 482 | 138 | 1 | 154 | 635 | 174 | 654 | 0.0 | 762 |
| MS.gene70297.t1 | AT3G05820 | 68.849 | 504 | 152 | 3 | 132 | 633 | 121 | 621 | 0.0 | 754 |
| MS.gene70297.t1 | AT3G06500 | 71.638 | 409 | 115 | 1 | 227 | 635 | 48 | 455 | 0.0 | 651 |
| MS.gene70297.t1 | AT3G05820 | 72.194 | 392 | 104 | 3 | 132 | 521 | 121 | 509 | 0.0 | 614 |
| MS.gene70297.t1 | AT4G09510 | 59.737 | 457 | 179 | 1 | 162 | 618 | 95 | 546 | 0.0 | 604 |
| MS.gene70297.t1 | AT1G35580 | 60.573 | 454 | 174 | 1 | 162 | 615 | 87 | 535 | 0.0 | 600 |
| MS.gene70297.t1 | AT1G35580 | 60.573 | 454 | 174 | 1 | 162 | 615 | 87 | 535 | 0.0 | 600 |
| MS.gene70297.t1 | AT4G34860 | 58.710 | 465 | 186 | 2 | 162 | 626 | 109 | 567 | 0.0 | 595 |
| MS.gene70297.t1 | AT4G34860 | 58.710 | 465 | 186 | 2 | 162 | 626 | 109 | 567 | 0.0 | 595 |
| MS.gene70297.t1 | AT4G34860 | 58.710 | 465 | 186 | 2 | 162 | 626 | 109 | 567 | 0.0 | 595 |
| MS.gene70297.t1 | AT1G22650 | 59.251 | 454 | 180 | 1 | 162 | 615 | 72 | 520 | 0.0 | 586 |
| MS.gene70297.t1 | AT1G72000 | 57.082 | 466 | 195 | 1 | 153 | 618 | 28 | 488 | 0.0 | 574 |
| MS.gene70297.t1 | AT4G09510 | 60.647 | 371 | 141 | 1 | 162 | 532 | 95 | 460 | 1.21e-170 | 494 |
| MS.gene70297.t1 | AT1G35580 | 60.160 | 374 | 144 | 1 | 162 | 535 | 87 | 455 | 4.21e-169 | 491 |
| MS.gene70297.t1 | AT1G22650 | 58.760 | 371 | 148 | 1 | 162 | 532 | 72 | 437 | 9.13e-164 | 477 |
Find 152 sgRNAs with CRISPR-Local
Find 349 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATATTAGAGAATATTAT+TGG | 0.190575 | 4.1:+9271512 | MS.gene70297:CDS |
| TTCCTCCCGCGCTTTCCTTT+TGG | 0.191105 | 4.1:-9272580 | None:intergenic |
| TTTAGAGTTTGAAGATGTTT+TGG | 0.260151 | 4.1:+9268035 | MS.gene70297:CDS |
| CTCTGCAACAGAAGAGGTTT+TGG | 0.280737 | 4.1:+9269258 | MS.gene70297:CDS |
| TTTAAAACCACCATGTCTTT+AGG | 0.281032 | 4.1:+9267652 | None:intergenic |
| CGGGCATCCTTTGGAGATTC+AGG | 0.282200 | 4.1:+9269623 | MS.gene70297:CDS |
| ATCAGTATGTTTGCTTTACT+TGG | 0.283665 | 4.1:-9272511 | None:intergenic |
| AATTATTGTGGGAATCCTAT+TGG | 0.285852 | 4.1:+9268180 | MS.gene70297:CDS |
| CAGAAACTGACACTGGTAAA+TGG | 0.302109 | 4.1:-9267853 | None:intergenic |
| TCATACAATTTGTTCGCAAC+TGG | 0.302118 | 4.1:-9267753 | None:intergenic |
| TTCAAAACATTGGTACTGTT+TGG | 0.308716 | 4.1:-9268222 | None:intergenic |
| CTCTGGGGATTTATCTGTTC+AGG | 0.310355 | 4.1:+9269473 | MS.gene70297:CDS |
| ATGGATCAGCTGATCTTATA+CGG | 0.322618 | 4.1:+9271458 | MS.gene70297:CDS |
| AACAAAGGAGGCTACTTAAT+TGG | 0.324104 | 4.1:+9271658 | MS.gene70297:CDS |
| TAGATGCAGTACGTGTTCTT+AGG | 0.326966 | 4.1:-9271889 | None:intergenic |
| AACCAGCTCACATGGATTTC+CGG | 0.330359 | 4.1:+9271689 | MS.gene70297:CDS |
| CCAGATTTCTCCTTGGTTAG+TGG | 0.330635 | 4.1:+9271624 | MS.gene70297:CDS |
| TGAGGCCAAATGGTCGGATT+TGG | 0.332213 | 4.1:+9271792 | MS.gene70297:CDS |
| GAAATCGATGGGGCCTTAAC+TGG | 0.345413 | 4.1:-9267831 | None:intergenic |
| CGTGTTGCTCCTGTTGATTC+CGG | 0.364802 | 4.1:+9269310 | MS.gene70297:CDS |
| GGGCATACACGGGCATCCTT+TGG | 0.367981 | 4.1:+9269614 | MS.gene70297:CDS |
| TTGTCATCCAATGTTACAAA+TGG | 0.378488 | 4.1:+9268075 | MS.gene70297:CDS |
| GGCCTCAATAAGATCCAATA+TGG | 0.382722 | 4.1:-9271776 | None:intergenic |
| CTGGCCATCACTTCTCTGGC+AGG | 0.392960 | 4.1:+9272009 | MS.gene70297:CDS |
| GGAACAATCACATGCCATAT+TGG | 0.401885 | 4.1:+9271762 | MS.gene70297:CDS |
| GCCACTCAAGATTTGTTATC+CGG | 0.408700 | 4.1:+9271825 | MS.gene70297:CDS |
| ACGAAAAGATCTCGATTCAT+TGG | 0.409792 | 4.1:+9272418 | MS.gene70297:CDS |
| ATGGCCAGGAGCCTCCATTA+TGG | 0.412090 | 4.1:-9271994 | None:intergenic |
| TTTCAGACATGGTCAATTGC+GGG | 0.416114 | 4.1:+9272457 | MS.gene70297:CDS |
| CGAGCATATGGAAAATGCTC+TGG | 0.418767 | 4.1:+9269456 | MS.gene70297:CDS |
| TTTGCAGCAATAGTTCCAAT+AGG | 0.419547 | 4.1:-9268195 | None:intergenic |
| TATCATACTCTCCCTTCAAT+AGG | 0.421624 | 4.1:-9268293 | None:intergenic |
| GCTCCTGGCCATCACTTCTC+TGG | 0.423609 | 4.1:+9272005 | MS.gene70297:CDS |
| TGCCACCAAATCCGACCATT+TGG | 0.424995 | 4.1:-9271797 | None:intergenic |
| AACCAAGGAGAAATCTGGTC+TGG | 0.425338 | 4.1:-9271619 | None:intergenic |
| ATTAAGTAGCCTCCTTTGTT+CGG | 0.435238 | 4.1:-9271655 | None:intergenic |
| AGGCCTTGGTCTTACCATAA+TGG | 0.446670 | 4.1:+9271980 | MS.gene70297:intron |
| TGGAGTCGCTTTCCTATTGA+AGG | 0.447362 | 4.1:+9268281 | MS.gene70297:CDS |
| ATTTGTTATCCGGCTCTTGA+AGG | 0.449396 | 4.1:+9271835 | MS.gene70297:CDS |
| TTATCCGGCTCTTGAAGGTC+AGG | 0.451665 | 4.1:+9271840 | MS.gene70297:CDS |
| TAAGGTTCGGACAGTTCCTC+TGG | 0.452150 | 4.1:+9269225 | MS.gene70297:CDS |
| GACTTTGGAGAGGCAGCCAT+TGG | 0.458365 | 4.1:+9269286 | MS.gene70297:CDS |
| TTGAAGCTTTGTCTTGCTGA+TGG | 0.459012 | 4.1:+9269531 | MS.gene70297:CDS |
| AATGTGAGCGGCATAACTTC+AGG | 0.459764 | 4.1:+9267934 | MS.gene70297:CDS |
| TTGATTAATGCCAACCCAAA+AGG | 0.460057 | 4.1:+9272565 | MS.gene70297:CDS |
| GAGAGAGTTGATGTGCAAAC+AGG | 0.461295 | 4.1:+9269495 | MS.gene70297:CDS |
| TTATACGGGCACTGAACAAT+CGG | 0.461373 | 4.1:+9271473 | MS.gene70297:CDS |
| CATTTACATGTCTGCAACCA+TGG | 0.467885 | 4.1:-9267898 | None:intergenic |
| GAGTCTGTAGTTAATTATTG+TGG | 0.473580 | 4.1:+9268168 | MS.gene70297:CDS |
| CTGCAACCATGGATGACTAT+AGG | 0.473890 | 4.1:-9267887 | None:intergenic |
| GGCCAAATGGTCGGATTTGG+TGG | 0.475817 | 4.1:+9271795 | MS.gene70297:CDS |
| TCTTCATACACTTCAGCTGC+AGG | 0.476188 | 4.1:+9268332 | MS.gene70297:CDS |
| CCACTAACCAAGGAGAAATC+TGG | 0.479615 | 4.1:-9271624 | None:intergenic |
| GCATGCTTCAAAGCCAGTTA+AGG | 0.480695 | 4.1:+9267818 | MS.gene70297:CDS |
| TCAGTATGTTTGCTTTACTT+GGG | 0.481398 | 4.1:-9272510 | None:intergenic |
| ATGGCTGCCTCTCCAAAGTC+AGG | 0.485283 | 4.1:-9269283 | None:intergenic |
| CCATCAGTTACTAATAATGT+TGG | 0.490435 | 4.1:-9269567 | None:intergenic |
| AGTCTGTAGTTAATTATTGT+GGG | 0.491436 | 4.1:+9268169 | MS.gene70297:CDS |
| TGTCATCCAATGTTACAAAT+GGG | 0.492423 | 4.1:+9268076 | MS.gene70297:CDS |
| CAGGAGACGGTAATGGATCA+AGG | 0.493037 | 4.1:+9267953 | MS.gene70297:CDS |
| TTTCTCCTTGGTTAGTGGAG+TGG | 0.493135 | 4.1:+9271629 | MS.gene70297:CDS |
| GGCAGTCCCATTTGTAACAT+TGG | 0.495902 | 4.1:-9268082 | None:intergenic |
| GTGGTCTGTTGTCAGTAGTA+TGG | 0.495960 | 4.1:+9271732 | MS.gene70297:CDS |
| AACTGGGAAGTGTTGACAAA+AGG | 0.497494 | 4.1:-9267736 | None:intergenic |
| CTGCCAGAGAAGTGATGGCC+AGG | 0.502165 | 4.1:-9272008 | None:intergenic |
| TGGATCTTATTGAGGCCAAA+TGG | 0.504361 | 4.1:+9271782 | MS.gene70297:CDS |
| GAGCATATGGAAAATGCTCT+GGG | 0.507897 | 4.1:+9269457 | MS.gene70297:CDS |
| CATCAGTTACTAATAATGTT+GGG | 0.514916 | 4.1:-9269566 | None:intergenic |
| TGCCATATTGGATCTTATTG+AGG | 0.522196 | 4.1:+9271774 | MS.gene70297:CDS |
| ACCCAGACCAGATTTCTCCT+TGG | 0.522729 | 4.1:+9271617 | MS.gene70297:CDS |
| CACTCCTGACCTTCAAGAGC+CGG | 0.522930 | 4.1:-9271844 | None:intergenic |
| CATACAATTTGTTCGCAACT+GGG | 0.525650 | 4.1:-9267752 | None:intergenic |
| TATTGGAACTATTGCTGCAA+AGG | 0.528262 | 4.1:+9268197 | MS.gene70297:CDS |
| CCAACATTATTAGTAACTGA+TGG | 0.529599 | 4.1:+9269567 | MS.gene70297:CDS |
| CTCTATTGAGGAAGAAGCGT+GGG | 0.531182 | 4.1:+9268134 | MS.gene70297:CDS |
| GGCTCATTATACGCGGATTG+AGG | 0.533659 | 4.1:-9267715 | None:intergenic |
| ACCAAGGAGAAATCTGGTCT+GGG | 0.534821 | 4.1:-9271618 | None:intergenic |
| GCAGGCATCAAACCTTGTCC+TGG | 0.538634 | 4.1:-9269196 | None:intergenic |
| CACTGGTAAATGGAAATCGA+TGG | 0.539558 | 4.1:-9267843 | None:intergenic |
| AACCGGAAATCCATGTGAGC+TGG | 0.541172 | 4.1:-9271691 | None:intergenic |
| ACCCAAAAGGAAAGCGCGGG+AGG | 0.541698 | 4.1:+9272578 | MS.gene70297:CDS |
| CATCTCACGTGCACAACGTA+AGG | 0.542973 | 4.1:-9271422 | None:intergenic |
| TAACTTACAACCAGCTCACA+TGG | 0.546165 | 4.1:+9271681 | MS.gene70297:CDS |
| AAACATACTGATAACTGAAG+AGG | 0.547667 | 4.1:+9272522 | MS.gene70297:CDS |
| AGATCAGCTGATCCATCCTC+AGG | 0.548249 | 4.1:-9271451 | None:intergenic |
| AATAGGAAAGCGACTCCAGA+TGG | 0.548635 | 4.1:-9268276 | None:intergenic |
| AATTAGCCTCAACTCTATTG+AGG | 0.549466 | 4.1:+9268122 | MS.gene70297:CDS |
| GTCCGAACCTTAAAACTAGC+AGG | 0.549954 | 4.1:-9269214 | None:intergenic |
| CAGGAGTGGCAGATAATCAC+TGG | 0.554473 | 4.1:+9271859 | MS.gene70297:CDS |
| GCAGACATGTAAATGCCAAA+AGG | 0.561090 | 4.1:+9267906 | MS.gene70297:CDS |
| AACAGGAGCAACACGGCCAA+TGG | 0.563132 | 4.1:-9269302 | None:intergenic |
| ACTGGTAAATGGAAATCGAT+GGG | 0.563971 | 4.1:-9267842 | None:intergenic |
| GTTTCAGACATGGTCAATTG+CGG | 0.565248 | 4.1:+9272456 | MS.gene70297:CDS |
| ATAACTTCAGGAGACGGTAA+TGG | 0.567558 | 4.1:+9267946 | MS.gene70297:CDS |
| GATCGAAGGATGGGCATACA+CGG | 0.567712 | 4.1:+9269603 | MS.gene70297:CDS |
| AGAAAAGATCCTCAAGGCAT+AGG | 0.570915 | 4.1:+9267776 | MS.gene70297:CDS |
| ACAATGGATTGTCATAGTCC+AGG | 0.574008 | 4.1:+9269178 | MS.gene70297:CDS |
| TTGGTCATAATTCAAAACAT+TGG | 0.578110 | 4.1:-9268232 | None:intergenic |
| CCAACCCAAAAGGAAAGCGC+GGG | 0.582506 | 4.1:+9272575 | MS.gene70297:CDS |
| GCCAACCCAAAAGGAAAGCG+CGG | 0.585494 | 4.1:+9272574 | MS.gene70297:CDS |
| CTTACCATAATGGAGGCTCC+TGG | 0.587241 | 4.1:+9271990 | MS.gene70297:CDS |
| CAAACCTGCCAGAGAAGTGA+TGG | 0.587691 | 4.1:-9272013 | None:intergenic |
| ACGGGCACTGAACAATCGGC+TGG | 0.589732 | 4.1:+9271477 | MS.gene70297:CDS |
| TGGATCAGCTGATCTTATAC+GGG | 0.592987 | 4.1:+9271459 | MS.gene70297:CDS |
| CAAGCAGCAGCTTTGACACA+AGG | 0.593252 | 4.1:-9272483 | None:intergenic |
| CTTCTTCCTCAATAGAGTTG+AGG | 0.599582 | 4.1:-9268128 | None:intergenic |
| TCTTATTGAGGCCAAATGGT+CGG | 0.600264 | 4.1:+9271786 | MS.gene70297:CDS |
| ATCGAAGACTCATACAATGT+AGG | 0.603716 | 4.1:-9272617 | None:intergenic |
| TTGCATGATAGATCGAAGGA+TGG | 0.604658 | 4.1:+9269593 | MS.gene70297:CDS |
| ATCGAAGGATGGGCATACAC+GGG | 0.608184 | 4.1:+9269604 | MS.gene70297:CDS |
| AGCGGCATAACTTCAGGAGA+CGG | 0.611888 | 4.1:+9267940 | MS.gene70297:CDS |
| ATAAGACCTATAGTCATCCA+TGG | 0.612582 | 4.1:+9267881 | MS.gene70297:CDS |
| GGAGTCGCTTTCCTATTGAA+GGG | 0.613769 | 4.1:+9268282 | MS.gene70297:CDS |
| TCAGAGCTGGGAGAAAACAA+TGG | 0.616598 | 4.1:+9269162 | MS.gene70297:intron |
| TAAAATCACGAATAAAGACT+TGG | 0.617406 | 4.1:-9268251 | None:intergenic |
| GAGATGCTTACTCCTGAGGA+TGG | 0.617558 | 4.1:+9271439 | MS.gene70297:CDS |
| TGATGACTCTGCAACAGAAG+AGG | 0.617863 | 4.1:+9269252 | MS.gene70297:CDS |
| GAGTGGATGCCGAACAAAGG+AGG | 0.619198 | 4.1:+9271646 | MS.gene70297:CDS |
| AAGAAGCGTGGGATCTACTG+AGG | 0.619813 | 4.1:+9268145 | MS.gene70297:CDS |
| TGCATGATAGATCGAAGGAT+GGG | 0.624079 | 4.1:+9269594 | MS.gene70297:CDS |
| AACATGTGATCTCAGGGCTG+TGG | 0.624246 | 4.1:+9269418 | MS.gene70297:intron |
| GTGGAGTGGATGCCGAACAA+AGG | 0.624360 | 4.1:+9271643 | MS.gene70297:CDS |
| CGCGGATTGAGGAACAACAC+TGG | 0.624803 | 4.1:-9267704 | None:intergenic |
| ATGTGATCTCAGGGCTGTGG+TGG | 0.627914 | 4.1:+9269421 | MS.gene70297:intron |
| GTTCGGACAGTTCCTCTGGA+AGG | 0.631939 | 4.1:+9269229 | MS.gene70297:CDS |
| AGTCTCAGTTGTTTCAGACA+TGG | 0.632889 | 4.1:+9272446 | MS.gene70297:CDS |
| GTAAACACCTGAATCTCCAA+AGG | 0.633620 | 4.1:-9269630 | None:intergenic |
| GACGTATATCAAGAGACAAG+TGG | 0.638198 | 4.1:+9272380 | MS.gene70297:CDS |
| AGTACTCCTCTGTCTTGTAA+CGG | 0.638711 | 4.1:-9271564 | None:intergenic |
| TTTGGATCCTGACTTTGGAG+AGG | 0.640365 | 4.1:+9269276 | MS.gene70297:CDS |
| GTTCTTGCATGATAGATCGA+AGG | 0.640874 | 4.1:+9269589 | MS.gene70297:CDS |
| GCCGGATAACAAATCTTGAG+TGG | 0.648159 | 4.1:-9271826 | None:intergenic |
| CCTTGGTCTTACCATAATGG+AGG | 0.649693 | 4.1:+9271983 | MS.gene70297:CDS |
| AGAAGCGTGGGATCTACTGA+GGG | 0.653271 | 4.1:+9268146 | MS.gene70297:CDS |
| GGCATCCACTCCACTAACCA+AGG | 0.654302 | 4.1:-9271634 | None:intergenic |
| GTATGAAGAAAAGATCCTCA+AGG | 0.656724 | 4.1:+9267770 | MS.gene70297:CDS |
| CGGCTCTTGAAGGTCAGGAG+TGG | 0.658366 | 4.1:+9271845 | MS.gene70297:CDS |
| GATTGTCATAGTCCAGGACA+AGG | 0.659837 | 4.1:+9269184 | MS.gene70297:CDS |
| CGGAATCAACAGGAGCAACA+CGG | 0.660716 | 4.1:-9269309 | None:intergenic |
| TTTGGAAGCACCTAAAGACA+TGG | 0.673157 | 4.1:-9267662 | None:intergenic |
| ATAGTCACAGAAACTGACAC+TGG | 0.676501 | 4.1:-9267860 | None:intergenic |
| GACAAAAGGCTCATTATACG+CGG | 0.677479 | 4.1:-9267722 | None:intergenic |
| AATTTACCGTTACAAGACAG+AGG | 0.684719 | 4.1:+9271558 | MS.gene70297:CDS |
| GGCATGTGATTGTTCCTCTG+TGG | 0.685624 | 4.1:-9271755 | None:intergenic |
| CAAAAGGCTGAAAATGTGAG+CGG | 0.689069 | 4.1:+9267922 | MS.gene70297:CDS |
| ACTCTATTGAGGAAGAAGCG+TGG | 0.689990 | 4.1:+9268133 | MS.gene70297:CDS |
| GCAGAGTCATCACCTTCCAG+AGG | 0.695873 | 4.1:-9269241 | None:intergenic |
| ACGTGAGATGCTTACTCCTG+AGG | 0.707533 | 4.1:+9271435 | MS.gene70297:CDS |
| CCTCCATTATGGTAAGACCA+AGG | 0.711037 | 4.1:-9271983 | None:intergenic |
| TGTCAGTAGTATGGCCACAG+AGG | 0.719456 | 4.1:+9271741 | MS.gene70297:CDS |
| CTGGTAAATGGAAATCGATG+GGG | 0.725256 | 4.1:-9267841 | None:intergenic |
| AGCATATGGAAAATGCTCTG+GGG | 0.753456 | 4.1:+9269458 | MS.gene70297:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAATGAAAAAGATTTAAT+AGG | - | chr4.1:9272188-9272207 | None:intergenic | 10.0% |
| !!! | TGAAAGATTTTTTATAAAAA+GGG | - | chr4.1:9268613-9268632 | None:intergenic | 10.0% |
| !!! | TTGAAAGATTTTTTATAAAA+AGG | - | chr4.1:9268614-9268633 | None:intergenic | 10.0% |
| !!! | TTTTATTTAATTTTTTTTGC+AGG | + | chr4.1:9271960-9271979 | MS.gene70297:intron | 10.0% |
| !! | AAAACAAAATATAAAAAGCT+TGG | - | chr4.1:9270495-9270514 | None:intergenic | 15.0% |
| !! | AATAAACTAAATGCAATATA+AGG | + | chr4.1:9270122-9270141 | MS.gene70297:intron | 15.0% |
| !! | TGCAATCTAAAAATAAAATT+CGG | - | chr4.1:9272068-9272087 | None:intergenic | 15.0% |
| !! | TTCATATTAGAGAATATTAT+TGG | + | chr4.1:9271512-9271531 | MS.gene70297:CDS | 15.0% |
| !!! | TAAATAACTCTTTTCATTAA+AGG | + | chr4.1:9269005-9269024 | MS.gene70297:intron | 15.0% |
| !!! | TATTTAACTATTTCTTGTTA+AGG | + | chr4.1:9269685-9269704 | MS.gene70297:intron | 15.0% |
| !! | AAACTTAACATAATACTTCT+TGG | + | chr4.1:9269379-9269398 | MS.gene70297:intron | 20.0% |
| !! | AATTGTTGAAACTACAAAAA+AGG | + | chr4.1:9270233-9270252 | MS.gene70297:intron | 20.0% |
| !! | ATTTGAATGTATTAAAGATG+AGG | + | chr4.1:9270011-9270030 | MS.gene70297:intron | 20.0% |
| !! | GCAATCTAAAAATAAAATTC+GGG | - | chr4.1:9272067-9272086 | None:intergenic | 20.0% |
| !! | TGCATTTATTTAGATAGATT+GGG | + | chr4.1:9269750-9269769 | MS.gene70297:intron | 20.0% |
| !! | TTACAAGTTACAATTAAAGA+TGG | + | chr4.1:9271313-9271332 | MS.gene70297:intron | 20.0% |
| !! | TTTATAACATATTCCAAATC+TGG | + | chr4.1:9270146-9270165 | MS.gene70297:intron | 20.0% |
| !!! | ATATCTTTTTTATGCATGAA+AGG | + | chr4.1:9269956-9269975 | MS.gene70297:intron | 20.0% |
| !!! | ATTAGTTAATGTTTTCATCA+AGG | - | chr4.1:9268772-9268791 | None:intergenic | 20.0% |
| !!! | CTGTCTTTTATTTTTGTTAA+AGG | + | chr4.1:9269889-9269908 | MS.gene70297:intron | 20.0% |
| !!! | TGTTTTATTTTTCTGTTTCT+AGG | + | chr4.1:9271384-9271403 | MS.gene70297:intron | 20.0% |
| !!! | TTTATTTTTGTTAAAGGAGT+CGG | + | chr4.1:9269895-9269914 | MS.gene70297:intron | 20.0% |
| !!! | TTTTTTTTACCATTAACTGT+TGG | - | chr4.1:9270391-9270410 | None:intergenic | 20.0% |
| ! | AAGGTTTATTACTAAAGGAA+GGG | + | chr4.1:9268978-9268997 | MS.gene70297:intron | 25.0% |
| ! | AGTCTGTAGTTAATTATTGT+GGG | + | chr4.1:9268169-9268188 | MS.gene70297:CDS | 25.0% |
| ! | CATCAGTTACTAATAATGTT+GGG | - | chr4.1:9269569-9269588 | None:intergenic | 25.0% |
| ! | CATTAGTAATCTTTCATTGT+TGG | + | chr4.1:9269051-9269070 | MS.gene70297:intron | 25.0% |
| ! | CCTCTTTCTTTATATTGAAA+CGG | + | chr4.1:9270895-9270914 | MS.gene70297:intron | 25.0% |
| ! | CGTTTCAATATAAAGAAAGA+GGG | - | chr4.1:9270897-9270916 | None:intergenic | 25.0% |
| ! | GAATTGTAATGACTAATGAA+TGG | - | chr4.1:9268522-9268541 | None:intergenic | 25.0% |
| ! | GTGCATTTATTTAGATAGAT+TGG | + | chr4.1:9269749-9269768 | MS.gene70297:intron | 25.0% |
| ! | GTTTCAATATAAAGAAAGAG+GGG | - | chr4.1:9270896-9270915 | None:intergenic | 25.0% |
| ! | TAAAATCACGAATAAAGACT+TGG | - | chr4.1:9268254-9268273 | None:intergenic | 25.0% |
| ! | TAAATAAATCTAACAGCAGT+GGG | - | chr4.1:9270852-9270871 | None:intergenic | 25.0% |
| ! | TACCACAAGAAAATACATAT+AGG | - | chr4.1:9269094-9269113 | None:intergenic | 25.0% |
| ! | TTAAATAAATCTAACAGCAG+TGG | - | chr4.1:9270853-9270872 | None:intergenic | 25.0% |
| ! | TTATTTAACATGTGATCTCA+GGG | + | chr4.1:9269412-9269431 | MS.gene70297:intron | 25.0% |
| ! | TTGGTCATAATTCAAAACAT+TGG | - | chr4.1:9268235-9268254 | None:intergenic | 25.0% |
| !! | AACTCTTTTCATTAAAGGAA+GGG | + | chr4.1:9269010-9269029 | MS.gene70297:intron | 25.0% |
| !! | CTAAAGTGAAAAAAGTATAG+TGG | - | chr4.1:9272148-9272167 | None:intergenic | 25.0% |
| !! | TAACTCTTTTCATTAAAGGA+AGG | + | chr4.1:9269009-9269028 | MS.gene70297:intron | 25.0% |
| !!! | ATTATTTTACTACGAGCATA+TGG | + | chr4.1:9269444-9269463 | MS.gene70297:CDS | 25.0% |
| !!! | CTAATGAAAAGTGTCATTTA+AGG | - | chr4.1:9269037-9269056 | None:intergenic | 25.0% |
| !!! | CTTTTACTGTTTTGAAGTAA+AGG | + | chr4.1:9270314-9270333 | MS.gene70297:intron | 25.0% |
| !!! | GTTATTAGCAGTGTTTTTTT+AGG | - | chr4.1:9271185-9271204 | None:intergenic | 25.0% |
| !!! | GTTTTAACTTCCTGTTAAAT+GGG | + | chr4.1:9270510-9270529 | MS.gene70297:intron | 25.0% |
| !!! | TGTTTTAACTTCCTGTTAAA+TGG | + | chr4.1:9270509-9270528 | MS.gene70297:intron | 25.0% |
| !!! | TTTAGAGTTTGAAGATGTTT+TGG | + | chr4.1:9268035-9268054 | MS.gene70297:CDS | 25.0% |
| !!! | TTTTAACTTCCTGTTAAATG+GGG | + | chr4.1:9270511-9270530 | MS.gene70297:intron | 25.0% |
| AAACATACTGATAACTGAAG+AGG | + | chr4.1:9272522-9272541 | MS.gene70297:CDS | 30.0% | |
| AACATATACAATTTCAGAGC+TGG | + | chr4.1:9269149-9269168 | MS.gene70297:intron | 30.0% | |
| AAGGTGAAATTACACAGATT+TGG | - | chr4.1:9270360-9270379 | None:intergenic | 30.0% | |
| AATTATTGTGGGAATCCTAT+TGG | + | chr4.1:9268180-9268199 | MS.gene70297:CDS | 30.0% | |
| AATTCAAACATGCAATGCTT+AGG | - | chr4.1:9272249-9272268 | None:intergenic | 30.0% | |
| ACATATACAATTTCAGAGCT+GGG | + | chr4.1:9269150-9269169 | MS.gene70297:intron | 30.0% | |
| AGGACAAGGTTTATTACTAA+AGG | + | chr4.1:9268973-9268992 | MS.gene70297:intron | 30.0% | |
| AGGTGAAATTACACAGATTT+GGG | - | chr4.1:9270359-9270378 | None:intergenic | 30.0% | |
| AGGTTTATTACTAAAGGAAG+GGG | + | chr4.1:9268979-9268998 | MS.gene70297:intron | 30.0% | |
| AGTTTCCTAGTGAAAAAAAC+CGG | - | chr4.1:9271711-9271730 | None:intergenic | 30.0% | |
| ATCAGTATGTTTGCTTTACT+TGG | - | chr4.1:9272514-9272533 | None:intergenic | 30.0% | |
| ATTCCGGTAAAATAACTGAT+AGG | + | chr4.1:9269326-9269345 | MS.gene70297:intron | 30.0% | |
| CAAGGTTTATTACTAAAGGA+AGG | + | chr4.1:9268977-9268996 | MS.gene70297:intron | 30.0% | |
| CCAACATTATTAGTAACTGA+TGG | + | chr4.1:9269567-9269586 | MS.gene70297:CDS | 30.0% | |
| CCATCAGTTACTAATAATGT+TGG | - | chr4.1:9269570-9269589 | None:intergenic | 30.0% | |
| CCGTTTCAATATAAAGAAAG+AGG | - | chr4.1:9270898-9270917 | None:intergenic | 30.0% | |
| CTAAAATCTACCATACTGAT+GGG | - | chr4.1:9270173-9270192 | None:intergenic | 30.0% | |
| CTAGTCACTACTAAGAATAA+AGG | - | chr4.1:9269866-9269885 | None:intergenic | 30.0% | |
| CTTATTTAACATGTGATCTC+AGG | + | chr4.1:9269411-9269430 | MS.gene70297:intron | 30.0% | |
| CTTTATTCTTAGTAGTGACT+AGG | + | chr4.1:9269864-9269883 | MS.gene70297:intron | 30.0% | |
| GAATGTATTAAAGATGAGGT+GGG | + | chr4.1:9270015-9270034 | MS.gene70297:intron | 30.0% | |
| GACAACAAAAAAACTCAAGA+GGG | - | chr4.1:9268591-9268610 | None:intergenic | 30.0% | |
| GAGTCTGTAGTTAATTATTG+TGG | + | chr4.1:9268168-9268187 | MS.gene70297:CDS | 30.0% | |
| TAAAATCTACCATACTGATG+GGG | - | chr4.1:9270172-9270191 | None:intergenic | 30.0% | |
| TAACAGAAAAACATAAGCAG+AGG | - | chr4.1:9271920-9271939 | None:intergenic | 30.0% | |
| TAAGGTTAGACAAGAAACTT+TGG | + | chr4.1:9269703-9269722 | MS.gene70297:intron | 30.0% | |
| TATATTGAAACGGCACATTT+AGG | + | chr4.1:9270905-9270924 | MS.gene70297:intron | 30.0% | |
| TATTAAAAACCTATGCCTTG+AGG | - | chr4.1:9267788-9267807 | None:intergenic | 30.0% | |
| TATTACTGATAGCATGTTCT+TGG | + | chr4.1:9268371-9268390 | MS.gene70297:intron | 30.0% | |
| TCAGTATGTTTGCTTTACTT+GGG | - | chr4.1:9272513-9272532 | None:intergenic | 30.0% | |
| TGAATGTATTAAAGATGAGG+TGG | + | chr4.1:9270014-9270033 | MS.gene70297:intron | 30.0% | |
| TGATGTTGAAAAATCTAGTC+TGG | + | chr4.1:9267984-9268003 | MS.gene70297:CDS | 30.0% | |
| TGTCATCCAATGTTACAAAT+GGG | + | chr4.1:9268076-9268095 | MS.gene70297:CDS | 30.0% | |
| TTAACTGTTGGAACTTACAA+AGG | - | chr4.1:9270379-9270398 | None:intergenic | 30.0% | |
| TTAGTAATAAACCTTGTCCT+GGG | - | chr4.1:9268973-9268992 | None:intergenic | 30.0% | |
| TTCAAAACAGTAAAAGCCAT+GGG | - | chr4.1:9270310-9270329 | None:intergenic | 30.0% | |
| TTCAAAACATTGGTACTGTT+TGG | - | chr4.1:9268225-9268244 | None:intergenic | 30.0% | |
| TTCAAATTCCTAGAGCATAA+AGG | - | chr4.1:9269998-9270017 | None:intergenic | 30.0% | |
| TTGTAAGTTCCAACAGTTAA+TGG | + | chr4.1:9270379-9270398 | MS.gene70297:intron | 30.0% | |
| TTGTAGTTTCAACAATTCAG+TGG | - | chr4.1:9270230-9270249 | None:intergenic | 30.0% | |
| TTGTCATCCAATGTTACAAA+TGG | + | chr4.1:9268075-9268094 | MS.gene70297:CDS | 30.0% | |
| TTTAGTAATAAACCTTGTCC+TGG | - | chr4.1:9268974-9268993 | None:intergenic | 30.0% | |
| TTTCATTGTTGGTACTTCTT+TGG | + | chr4.1:9269062-9269081 | MS.gene70297:intron | 30.0% | |
| ! | AAAAACACAGAATTTGGGTT+GGG | - | chr4.1:9271077-9271096 | None:intergenic | 30.0% |
| ! | AATTGTACCAAGATTTTTCG+TGG | - | chr4.1:9268106-9268125 | None:intergenic | 30.0% |
| ! | ACTCTTTTCATTAAAGGAAG+GGG | + | chr4.1:9269011-9269030 | MS.gene70297:intron | 30.0% |
| ! | ATTCGTGATTTTATTCCATC+TGG | + | chr4.1:9268261-9268280 | MS.gene70297:CDS | 30.0% |
| ! | CTTTTCGTGTCATAATATTC+TGG | - | chr4.1:9272406-9272425 | None:intergenic | 30.0% |
| ! | GACCTATATGTATTTTCTTG+TGG | + | chr4.1:9269089-9269108 | MS.gene70297:intron | 30.0% |
| ! | GGAATTAAGAAAGTTGATTG+TGG | - | chr4.1:9268856-9268875 | None:intergenic | 30.0% |
| ! | GTTCCTTTTTCTTGTCAAAA+TGG | - | chr4.1:9269805-9269824 | None:intergenic | 30.0% |
| ! | TCTAAAATCTACCATACTGA+TGG | - | chr4.1:9270174-9270193 | None:intergenic | 30.0% |
| ! | TTGGCATGAAAGTATAATCA+AGG | - | chr4.1:9270476-9270495 | None:intergenic | 30.0% |
| !! | GATCCTATCAGTTATTTTAC+CGG | - | chr4.1:9269332-9269351 | None:intergenic | 30.0% |
| !!! | TTAATTTTTTTTGCAGGCCT+TGG | + | chr4.1:9271966-9271985 | MS.gene70297:intron | 30.0% |
| !!! | TTGTTTCTGTTCTTGTTTTG+TGG | - | chr4.1:9270743-9270762 | None:intergenic | 30.0% |
| !!! | TTTTTTCACTAGGAAACTTG+TGG | + | chr4.1:9271713-9271732 | MS.gene70297:CDS | 30.0% |
| AAATCCTTTCATAGCTTAGC+TGG | + | chr4.1:9272215-9272234 | MS.gene70297:intron | 35.0% | |
| AATTCCCGTGATTTACTCAA+CGG | + | chr4.1:9268870-9268889 | MS.gene70297:intron | 35.0% | |
| AATTTACCGTTACAAGACAG+AGG | + | chr4.1:9271558-9271577 | MS.gene70297:CDS | 35.0% | |
| ACATATTTCCATTGCCAAGA+AGG | - | chr4.1:9270976-9270995 | None:intergenic | 35.0% | |
| ACATTATCAAAAGCTTCCCA+TGG | + | chr4.1:9270291-9270310 | MS.gene70297:intron | 35.0% | |
| ACGAAAAGATCTCGATTCAT+TGG | + | chr4.1:9272418-9272437 | MS.gene70297:CDS | 35.0% | |
| ACTGGTAAATGGAAATCGAT+GGG | - | chr4.1:9267845-9267864 | None:intergenic | 35.0% | |
| AGAGCATAAAGGTTAATGTG+AGG | - | chr4.1:9269987-9270006 | None:intergenic | 35.0% | |
| AGATAGAACCATTCAGGATT+TGG | - | chr4.1:9271160-9271179 | None:intergenic | 35.0% | |
| AGCTGCAAAAACACAGAATT+TGG | - | chr4.1:9271083-9271102 | None:intergenic | 35.0% | |
| ATAAGACCTATAGTCATCCA+TGG | + | chr4.1:9267881-9267900 | MS.gene70297:CDS | 35.0% | |
| ATATATCAGTGACAAAGCTG+TGG | + | chr4.1:9271112-9271131 | MS.gene70297:intron | 35.0% | |
| ATCACACTGTAAAATCGTGT+AGG | + | chr4.1:9270535-9270554 | MS.gene70297:intron | 35.0% | |
| ATGGATCAGCTGATCTTATA+CGG | + | chr4.1:9271458-9271477 | MS.gene70297:CDS | 35.0% | |
| ATGTGCCTCTGTCTAAATAT+AGG | + | chr4.1:9268564-9268583 | MS.gene70297:intron | 35.0% | |
| CAAAAACACAGAATTTGGGT+TGG | - | chr4.1:9271078-9271097 | None:intergenic | 35.0% | |
| CAAAAGAGCAGTAGATACAA+AGG | + | chr4.1:9270682-9270701 | MS.gene70297:intron | 35.0% | |
| CACATCTCTTGACATAGATT+TGG | + | chr4.1:9270257-9270276 | MS.gene70297:intron | 35.0% | |
| CACATTAACCTTTATGCTCT+AGG | + | chr4.1:9269987-9270006 | MS.gene70297:intron | 35.0% | |
| CTTCAAAACAGTAAAAGCCA+TGG | - | chr4.1:9270311-9270330 | None:intergenic | 35.0% | |
| GAAATAGATTGTATTGCCGT+TGG | + | chr4.1:9270084-9270103 | MS.gene70297:intron | 35.0% | |
| GCACATAGAGTTAGATTAGT+GGG | - | chr4.1:9268550-9268569 | None:intergenic | 35.0% | |
| GCATGCTAATGAATAAAGAC+AGG | - | chr4.1:9269661-9269680 | None:intergenic | 35.0% | |
| GCTGCAAAAACACAGAATTT+GGG | - | chr4.1:9271082-9271101 | None:intergenic | 35.0% | |
| GGAATAGTAAGACATATACG+AGG | - | chr4.1:9270443-9270462 | None:intergenic | 35.0% | |
| GGACAACAAAAAAACTCAAG+AGG | - | chr4.1:9268592-9268611 | None:intergenic | 35.0% | |
| GGTGAAATTACACAGATTTG+GGG | - | chr4.1:9270358-9270377 | None:intergenic | 35.0% | |
| GTATGAAGAAAAGATCCTCA+AGG | + | chr4.1:9267770-9267789 | MS.gene70297:CDS | 35.0% | |
| TAGGTAAGATAGAACCATTC+AGG | - | chr4.1:9271166-9271185 | None:intergenic | 35.0% | |
| TAGTAAGACATATACGAGGA+AGG | - | chr4.1:9270439-9270458 | None:intergenic | 35.0% | |
| TATAATCAAGGCAGTTGAGA+AGG | - | chr4.1:9270464-9270483 | None:intergenic | 35.0% | |
| TATCATACTCTCCCTTCAAT+AGG | - | chr4.1:9268296-9268315 | None:intergenic | 35.0% | |
| TATGAATAGAATAGTGTCCC+AGG | + | chr4.1:9268953-9268972 | MS.gene70297:intron | 35.0% | |
| TATTGGAACTATTGCTGCAA+AGG | + | chr4.1:9268197-9268216 | MS.gene70297:CDS | 35.0% | |
| TCAACGCTACTGATATTATC+AGG | + | chr4.1:9268649-9268668 | MS.gene70297:intron | 35.0% | |
| TGCCATATTGGATCTTATTG+AGG | + | chr4.1:9271774-9271793 | MS.gene70297:CDS | 35.0% | |
| TTGATTAATGCCAACCCAAA+AGG | + | chr4.1:9272565-9272584 | MS.gene70297:CDS | 35.0% | |
| TTGTTAAAGGAGTCGGTATT+AGG | + | chr4.1:9269902-9269921 | MS.gene70297:intron | 35.0% | |
| TTTGCAGCAATAGTTCCAAT+AGG | - | chr4.1:9268198-9268217 | None:intergenic | 35.0% | |
| ! | AATTAGCCTCAACTCTATTG+AGG | + | chr4.1:9268122-9268141 | MS.gene70297:CDS | 35.0% |
| ! | AGTTTTCCTATGCTAGATTG+AGG | + | chr4.1:9269826-9269845 | MS.gene70297:intron | 35.0% |
| ! | CATACAATTTGTTCGCAACT+GGG | - | chr4.1:9267755-9267774 | None:intergenic | 35.0% |
| ! | GGGTGTGTTTGTGTTTATTT+TGG | - | chr4.1:9270827-9270846 | None:intergenic | 35.0% |
| ! | TCATACAATTTGTTCGCAAC+TGG | - | chr4.1:9267756-9267775 | None:intergenic | 35.0% |
| ! | TTACCACAAGTCTTATCCAA+CGG | - | chr4.1:9270103-9270122 | None:intergenic | 35.0% |
| ! | TTGTAACTTGTAAGCATCTC+AGG | - | chr4.1:9271306-9271325 | None:intergenic | 35.0% |
| !! | AAAACACAGAATTTGGGTTG+GGG | - | chr4.1:9271076-9271095 | None:intergenic | 35.0% |
| !! | GCACCATTTTGACAAGAAAA+AGG | + | chr4.1:9269799-9269818 | MS.gene70297:intron | 35.0% |
| !! | GGTTTGTTACAATGACAGTT+TGG | + | chr4.1:9272030-9272049 | MS.gene70297:intron | 35.0% |
| !! | GTTATTTTACCGGAATCAAC+AGG | - | chr4.1:9269322-9269341 | None:intergenic | 35.0% |
| !!! | GATTTCCGGTTTTTTTCACT+AGG | + | chr4.1:9271703-9271722 | MS.gene70297:CDS | 35.0% |
| !!! | GTTTGAAGATGTTTTGGAAC+AGG | + | chr4.1:9268041-9268060 | MS.gene70297:CDS | 35.0% |
| !!! | TGTTTTGGAACAGGAAAAAG+AGG | + | chr4.1:9268050-9268069 | MS.gene70297:CDS | 35.0% |
| !!! | TTTGATGCCTGCTAGTTTTA+AGG | + | chr4.1:9269207-9269226 | MS.gene70297:CDS | 35.0% |
| AAGAGCAAAACCAACGCAAA+AGG | + | chr4.1:9270775-9270794 | MS.gene70297:intron | 40.0% | |
| AAGCAGACCTACATTGTATG+AGG | + | chr4.1:9272610-9272629 | MS.gene70297:CDS | 40.0% | |
| ACTGGACAGAACCTGAAAAA+CGG | - | chr4.1:9267689-9267708 | None:intergenic | 40.0% | |
| AGAAAAGATCCTCAAGGCAT+AGG | + | chr4.1:9267776-9267795 | MS.gene70297:CDS | 40.0% | |
| AGCATATGGAAAATGCTCTG+GGG | + | chr4.1:9269458-9269477 | MS.gene70297:CDS | 40.0% | |
| AGGGTCCTATATTTAGACAG+AGG | - | chr4.1:9268572-9268591 | None:intergenic | 40.0% | |
| AGTACTCCTCTGTCTTGTAA+CGG | - | chr4.1:9271567-9271586 | None:intergenic | 40.0% | |
| AGTGTGATTCCCCATTTAAC+AGG | - | chr4.1:9270523-9270542 | None:intergenic | 40.0% | |
| ATAACTTCAGGAGACGGTAA+TGG | + | chr4.1:9267946-9267965 | MS.gene70297:CDS | 40.0% | |
| ATACAAAGGAGAGCCTCAAA+AGG | + | chr4.1:9270696-9270715 | MS.gene70297:intron | 40.0% | |
| ATAGTCACAGAAACTGACAC+TGG | - | chr4.1:9267863-9267882 | None:intergenic | 40.0% | |
| ATATAAAGAAAGAGGGGACG+TGG | - | chr4.1:9270890-9270909 | None:intergenic | 40.0% | |
| ATCGTGTAGGTGTGAATGAT+TGG | + | chr4.1:9270548-9270567 | MS.gene70297:intron | 40.0% | |
| ATTCCCGTGATTTACTCAAC+GGG | + | chr4.1:9268871-9268890 | MS.gene70297:intron | 40.0% | |
| CAAAAGGCTGAAAATGTGAG+CGG | + | chr4.1:9267922-9267941 | MS.gene70297:CDS | 40.0% | |
| CACTGGTAAATGGAAATCGA+TGG | - | chr4.1:9267846-9267865 | None:intergenic | 40.0% | |
| CAGAAACTGACACTGGTAAA+TGG | - | chr4.1:9267856-9267875 | None:intergenic | 40.0% | |
| CAGAGAATCCAAATCCTGAA+TGG | + | chr4.1:9271149-9271168 | MS.gene70297:intron | 40.0% | |
| CATTTACATGTCTGCAACCA+TGG | - | chr4.1:9267901-9267920 | None:intergenic | 40.0% | |
| CTCTTGACATAGATTTGGAC+TGG | + | chr4.1:9270262-9270281 | MS.gene70297:intron | 40.0% | |
| CTGGTAAATGGAAATCGATG+GGG | - | chr4.1:9267844-9267863 | None:intergenic | 40.0% | |
| CTTCTTCCTCAATAGAGTTG+AGG | - | chr4.1:9268131-9268150 | None:intergenic | 40.0% | |
| GAAACCAGCTAAGCTATGAA+AGG | - | chr4.1:9272222-9272241 | None:intergenic | 40.0% | |
| GACAAAAGGCTCATTATACG+CGG | - | chr4.1:9267725-9267744 | None:intergenic | 40.0% | |
| GACGTATATCAAGAGACAAG+TGG | + | chr4.1:9272380-9272399 | MS.gene70297:CDS | 40.0% | |
| GAGCATATGGAAAATGCTCT+GGG | + | chr4.1:9269457-9269476 | MS.gene70297:CDS | 40.0% | |
| GCAGACATGTAAATGCCAAA+AGG | + | chr4.1:9267906-9267925 | MS.gene70297:CDS | 40.0% | |
| GGAACAATCACATGCCATAT+TGG | + | chr4.1:9271762-9271781 | MS.gene70297:CDS | 40.0% | |
| GGCACATAGAGTTAGATTAG+TGG | - | chr4.1:9268551-9268570 | None:intergenic | 40.0% | |
| GGCCTCAATAAGATCCAATA+TGG | - | chr4.1:9271779-9271798 | None:intergenic | 40.0% | |
| GTAAACACCTGAATCTCCAA+AGG | - | chr4.1:9269633-9269652 | None:intergenic | 40.0% | |
| GTCCTCAAAATGATGAAGAG+AGG | - | chr4.1:9270999-9271018 | None:intergenic | 40.0% | |
| GTTCTTGCATGATAGATCGA+AGG | + | chr4.1:9269589-9269608 | MS.gene70297:CDS | 40.0% | |
| GTTTCAGACATGGTCAATTG+CGG | + | chr4.1:9272456-9272475 | MS.gene70297:CDS | 40.0% | |
| TAACTTACAACCAGCTCACA+TGG | + | chr4.1:9271681-9271700 | MS.gene70297:CDS | 40.0% | |
| TAAGACATATACGAGGAAGG+TGG | - | chr4.1:9270436-9270455 | None:intergenic | 40.0% | |
| TAGATGCAGTACGTGTTCTT+AGG | - | chr4.1:9271892-9271911 | None:intergenic | 40.0% | |
| TAGGTGTGAATGATTGGGTT+TGG | + | chr4.1:9270554-9270573 | MS.gene70297:intron | 40.0% | |
| TCGTGTAGGTGTGAATGATT+GGG | + | chr4.1:9270549-9270568 | MS.gene70297:intron | 40.0% | |
| TCTTATTGAGGCCAAATGGT+CGG | + | chr4.1:9271786-9271805 | MS.gene70297:CDS | 40.0% | |
| TGCATGATAGATCGAAGGAT+GGG | + | chr4.1:9269594-9269613 | MS.gene70297:CDS | 40.0% | |
| TGGATCAGCTGATCTTATAC+GGG | + | chr4.1:9271459-9271478 | MS.gene70297:CDS | 40.0% | |
| TGGATCTTATTGAGGCCAAA+TGG | + | chr4.1:9271782-9271801 | MS.gene70297:CDS | 40.0% | |
| TTGCATGATAGATCGAAGGA+TGG | + | chr4.1:9269593-9269612 | MS.gene70297:CDS | 40.0% | |
| TTTCAGACATGGTCAATTGC+GGG | + | chr4.1:9272457-9272476 | MS.gene70297:CDS | 40.0% | |
| ! | ACAGCTTTTGCAGCAATATG+TGG | - | chr4.1:9272346-9272365 | None:intergenic | 40.0% |
| ! | AGTCTCAGTTGTTTCAGACA+TGG | + | chr4.1:9272446-9272465 | MS.gene70297:CDS | 40.0% |
| ! | GTCCTCTCTTCATCATTTTG+AGG | + | chr4.1:9270994-9271013 | MS.gene70297:intron | 40.0% |
| ! | TTGAAGCTTTGTCTTGCTGA+TGG | + | chr4.1:9269531-9269550 | MS.gene70297:CDS | 40.0% |
| !! | AACTGGGAAGTGTTGACAAA+AGG | - | chr4.1:9267739-9267758 | None:intergenic | 40.0% |
| !! | ACAATGGATTGTCATAGTCC+AGG | + | chr4.1:9269178-9269197 | MS.gene70297:CDS | 40.0% |
| !! | ATTTGTTATCCGGCTCTTGA+AGG | + | chr4.1:9271835-9271854 | MS.gene70297:CDS | 40.0% |
| !! | GACATAGATTTGGACTGGTA+TGG | + | chr4.1:9270267-9270286 | MS.gene70297:intron | 40.0% |
| !! | GCCACTCAAGATTTGTTATC+CGG | + | chr4.1:9271825-9271844 | MS.gene70297:CDS | 40.0% |
| !! | TTATACGGGCACTGAACAAT+CGG | + | chr4.1:9271473-9271492 | MS.gene70297:CDS | 40.0% |
| !!! | CGTTGGTTTTGCTCTTTGAT+AGG | - | chr4.1:9270771-9270790 | None:intergenic | 40.0% |
| !!! | TGCCTGCTAGTTTTAAGGTT+CGG | + | chr4.1:9269212-9269231 | MS.gene70297:CDS | 40.0% |
| AAAAGGACTCTAGCCAACCA+AGG | + | chr4.1:9270713-9270732 | MS.gene70297:intron | 45.0% | |
| AAACCAACGCAAAAGGCAAC+AGG | + | chr4.1:9270782-9270801 | MS.gene70297:intron | 45.0% | |
| AACCAACGCAAAAGGCAACA+GGG | + | chr4.1:9270783-9270802 | MS.gene70297:intron | 45.0% | |
| AACCAAGGAGAAATCTGGTC+TGG | - | chr4.1:9271622-9271641 | None:intergenic | 45.0% | |
| AACCAGCTCACATGGATTTC+CGG | + | chr4.1:9271689-9271708 | MS.gene70297:CDS | 45.0% | |
| AATAGGAAAGCGACTCCAGA+TGG | - | chr4.1:9268279-9268298 | None:intergenic | 45.0% | |
| AATGTGAGCGGCATAACTTC+AGG | + | chr4.1:9267934-9267953 | MS.gene70297:CDS | 45.0% | |
| ACCAAGGAGAAATCTGGTCT+GGG | - | chr4.1:9271621-9271640 | None:intergenic | 45.0% | |
| ACTCTATTGAGGAAGAAGCG+TGG | + | chr4.1:9268133-9268152 | MS.gene70297:CDS | 45.0% | |
| CAGAACCTGAAAAACGGCTT+TGG | - | chr4.1:9267683-9267702 | None:intergenic | 45.0% | |
| CCACTAACCAAGGAGAAATC+TGG | - | chr4.1:9271627-9271646 | None:intergenic | 45.0% | |
| CCAGATTTCTCCTTGGTTAG+TGG | + | chr4.1:9271624-9271643 | MS.gene70297:CDS | 45.0% | |
| CCTCCATTATGGTAAGACCA+AGG | - | chr4.1:9271986-9272005 | None:intergenic | 45.0% | |
| CGAGCATATGGAAAATGCTC+TGG | + | chr4.1:9269456-9269475 | MS.gene70297:CDS | 45.0% | |
| CTGCAACCATGGATGACTAT+AGG | - | chr4.1:9267890-9267909 | None:intergenic | 45.0% | |
| GATTGTCATAGTCCAGGACA+AGG | + | chr4.1:9269184-9269203 | MS.gene70297:CDS | 45.0% | |
| GCATGCTTCAAAGCCAGTTA+AGG | + | chr4.1:9267818-9267837 | MS.gene70297:CDS | 45.0% | |
| GCCGGATAACAAATCTTGAG+TGG | - | chr4.1:9271829-9271848 | None:intergenic | 45.0% | |
| GCTGTTCCTCAATCTAGCAT+AGG | - | chr4.1:9269835-9269854 | None:intergenic | 45.0% | |
| GGCAGTCCCATTTGTAACAT+TGG | - | chr4.1:9268085-9268104 | None:intergenic | 45.0% | |
| GTCCGAACCTTAAAACTAGC+AGG | - | chr4.1:9269217-9269236 | None:intergenic | 45.0% | |
| GTGGTCTGTTGTCAGTAGTA+TGG | + | chr4.1:9271732-9271751 | MS.gene70297:CDS | 45.0% | |
| TAAAGGTCCCTGATGTCTCA+AGG | + | chr4.1:9270331-9270350 | MS.gene70297:intron | 45.0% | |
| TAAATCTAACAGCAGTGGGC+TGG | - | chr4.1:9270848-9270867 | None:intergenic | 45.0% | |
| TAGAATAGTGTCCCAGGACA+AGG | + | chr4.1:9268959-9268978 | MS.gene70297:intron | 45.0% | |
| TCAGAGCTGGGAGAAAACAA+TGG | + | chr4.1:9269162-9269181 | MS.gene70297:intron | 45.0% | |
| TCTTCATACACTTCAGCTGC+AGG | + | chr4.1:9268332-9268351 | MS.gene70297:CDS | 45.0% | |
| TGATGACTCTGCAACAGAAG+AGG | + | chr4.1:9269252-9269271 | MS.gene70297:CDS | 45.0% | |
| TTCCCGTGATTTACTCAACG+GGG | + | chr4.1:9268872-9268891 | MS.gene70297:intron | 45.0% | |
| TTGCCGTTGGATAAGACTTG+TGG | + | chr4.1:9270097-9270116 | MS.gene70297:intron | 45.0% | |
| TTTCTCCTTGGTTAGTGGAG+TGG | + | chr4.1:9271629-9271648 | MS.gene70297:CDS | 45.0% | |
| ! | AAATCTAACAGCAGTGGGCT+GGG | - | chr4.1:9270847-9270866 | None:intergenic | 45.0% |
| ! | ACGAGGAAGGTGGAAAGTTT+TGG | - | chr4.1:9270426-9270445 | None:intergenic | 45.0% |
| ! | CGCTCACATTTTCAGCCTTT+TGG | - | chr4.1:9267924-9267943 | None:intergenic | 45.0% |
| ! | CTCTATTGAGGAAGAAGCGT+GGG | + | chr4.1:9268134-9268153 | MS.gene70297:CDS | 45.0% |
| ! | CTCTGCAACAGAAGAGGTTT+TGG | + | chr4.1:9269258-9269277 | MS.gene70297:CDS | 45.0% |
| ! | CTCTGGGGATTTATCTGTTC+AGG | + | chr4.1:9269473-9269492 | MS.gene70297:CDS | 45.0% |
| ! | GGAGTCGCTTTCCTATTGAA+GGG | + | chr4.1:9268282-9268301 | MS.gene70297:CDS | 45.0% |
| ! | TGGAGTCGCTTTCCTATTGA+AGG | + | chr4.1:9268281-9268300 | MS.gene70297:CDS | 45.0% |
| ! | TTTGGATCCTGACTTTGGAG+AGG | + | chr4.1:9269276-9269295 | MS.gene70297:CDS | 45.0% |
| !! | AGGCCTTGGTCTTACCATAA+TGG | + | chr4.1:9271980-9271999 | MS.gene70297:intron | 45.0% |
| !! | CCTTGGTCTTACCATAATGG+AGG | + | chr4.1:9271983-9272002 | MS.gene70297:CDS | 45.0% |
| !! | GAGAGAGTTGATGTGCAAAC+AGG | + | chr4.1:9269495-9269514 | MS.gene70297:CDS | 45.0% |
| !!! | AGCTTTTTCAGCCTCCTCAT+AGG | - | chr4.1:9268900-9268919 | None:intergenic | 45.0% |
| !!! | GAGGTTTTGGATCCTGACTT+TGG | + | chr4.1:9269271-9269290 | MS.gene70297:CDS | 45.0% |
| !!! | GCTTTTTCAGCCTCCTCATA+GGG | - | chr4.1:9268899-9268918 | None:intergenic | 45.0% |
| !!! | TCTTGTTTTGTGGTGTGCCT+TGG | - | chr4.1:9270733-9270752 | None:intergenic | 45.0% |
| !!! | TGCTTCCAAAGCCGTTTTTC+AGG | + | chr4.1:9267675-9267694 | MS.gene70297:CDS | 45.0% |
| AACATGTGATCTCAGGGCTG+TGG | + | chr4.1:9269418-9269437 | MS.gene70297:intron | 50.0% | |
| AACCGGAAATCCATGTGAGC+TGG | - | chr4.1:9271694-9271713 | None:intergenic | 50.0% | |
| AAGAAGGCGATGTAGGTAGG+TGG | - | chr4.1:9270960-9270979 | None:intergenic | 50.0% | |
| ACCCAGACCAGATTTCTCCT+TGG | + | chr4.1:9271617-9271636 | MS.gene70297:CDS | 50.0% | |
| ACCTACCTACATCGCCTTCT+TGG | + | chr4.1:9270959-9270978 | MS.gene70297:intron | 50.0% | |
| ACGTGAGATGCTTACTCCTG+AGG | + | chr4.1:9271435-9271454 | MS.gene70297:CDS | 50.0% | |
| AGATCAGCTGATCCATCCTC+AGG | - | chr4.1:9271454-9271473 | None:intergenic | 50.0% | |
| AGCGGCATAACTTCAGGAGA+CGG | + | chr4.1:9267940-9267959 | MS.gene70297:CDS | 50.0% | |
| AGCTTTCGTTGAGATGGCAG+TGG | - | chr4.1:9271030-9271049 | None:intergenic | 50.0% | |
| ATCGAAGGATGGGCATACAC+GGG | + | chr4.1:9269604-9269623 | MS.gene70297:CDS | 50.0% | |
| CAAACCTGCCAGAGAAGTGA+TGG | - | chr4.1:9272016-9272035 | None:intergenic | 50.0% | |
| CAAATCTGGCCCCATCAGTA+TGG | + | chr4.1:9270160-9270179 | MS.gene70297:intron | 50.0% | |
| CACTCGAGCTTTCGTTGAGA+TGG | - | chr4.1:9271036-9271055 | None:intergenic | 50.0% | |
| CACTGAGCACAAGATGCACT+CGG | + | chr4.1:9270655-9270674 | MS.gene70297:intron | 50.0% | |
| CAGGAGTGGCAGATAATCAC+TGG | + | chr4.1:9271859-9271878 | MS.gene70297:CDS | 50.0% | |
| CATACTGATGGGGCCAGATT+TGG | - | chr4.1:9270162-9270181 | None:intergenic | 50.0% | |
| CATCTCACGTGCACAACGTA+AGG | - | chr4.1:9271425-9271444 | None:intergenic | 50.0% | |
| CATTGCCAAGAAGGCGATGT+AGG | - | chr4.1:9270967-9270986 | None:intergenic | 50.0% | |
| CGATGTAGGTAGGTGGAGTT+GGG | - | chr4.1:9270953-9270972 | None:intergenic | 50.0% | |
| CGGAATCAACAGGAGCAACA+CGG | - | chr4.1:9269312-9269331 | None:intergenic | 50.0% | |
| CTACATCGCCTTCTTGGCAA+TGG | + | chr4.1:9270965-9270984 | MS.gene70297:intron | 50.0% | |
| CTGAGATGCACGTGACTGTA+GGG | - | chr4.1:9270600-9270619 | None:intergenic | 50.0% | |
| GAAATCGATGGGGCCTTAAC+TGG | - | chr4.1:9267834-9267853 | None:intergenic | 50.0% | |
| GACCCCGTTGAGTAAATCAC+GGG | - | chr4.1:9268877-9268896 | None:intergenic | 50.0% | |
| GAGATGCTTACTCCTGAGGA+TGG | + | chr4.1:9271439-9271458 | MS.gene70297:CDS | 50.0% | |
| GATCGAAGGATGGGCATACA+CGG | + | chr4.1:9269603-9269622 | MS.gene70297:CDS | 50.0% | |
| GATGTAGGTAGGTGGAGTTG+GGG | - | chr4.1:9270952-9270971 | None:intergenic | 50.0% | |
| GCTTTCGTTGAGATGGCAGT+GGG | - | chr4.1:9271029-9271048 | None:intergenic | 50.0% | |
| GGACCCCGTTGAGTAAATCA+CGG | - | chr4.1:9268878-9268897 | None:intergenic | 50.0% | |
| GGCATGTGATTGTTCCTCTG+TGG | - | chr4.1:9271758-9271777 | None:intergenic | 50.0% | |
| GGGACTGCCACGAAAAATCT+TGG | + | chr4.1:9268096-9268115 | MS.gene70297:CDS | 50.0% | |
| TAAGGTTCGGACAGTTCCTC+TGG | + | chr4.1:9269225-9269244 | MS.gene70297:CDS | 50.0% | |
| TGAGGCCAAATGGTCGGATT+TGG | + | chr4.1:9271792-9271811 | MS.gene70297:CDS | 50.0% | |
| TGCCACCAAATCCGACCATT+TGG | - | chr4.1:9271800-9271819 | None:intergenic | 50.0% | |
| TGTCAGTAGTATGGCCACAG+AGG | + | chr4.1:9271741-9271760 | MS.gene70297:CDS | 50.0% | |
| TTATCCGGCTCTTGAAGGTC+AGG | + | chr4.1:9271840-9271859 | MS.gene70297:CDS | 50.0% | |
| TTGGGGACCTTGAGACATCA+GGG | - | chr4.1:9270341-9270360 | None:intergenic | 50.0% | |
| TTTGGGGACCTTGAGACATC+AGG | - | chr4.1:9270342-9270361 | None:intergenic | 50.0% | |
| ! | AAGAAGCGTGGGATCTACTG+AGG | + | chr4.1:9268145-9268164 | MS.gene70297:CDS | 50.0% |
| ! | AGAAGCGTGGGATCTACTGA+GGG | + | chr4.1:9268146-9268165 | MS.gene70297:CDS | 50.0% |
| ! | CAAGCAGCAGCTTTGACACA+AGG | - | chr4.1:9272486-9272505 | None:intergenic | 50.0% |
| ! | CTTACCATAATGGAGGCTCC+TGG | + | chr4.1:9271990-9272009 | MS.gene70297:CDS | 50.0% |
| ! | GGCTCATTATACGCGGATTG+AGG | - | chr4.1:9267718-9267737 | None:intergenic | 50.0% |
| ! | GTTTTGTGGTGTGCCTTGGT+TGG | - | chr4.1:9270729-9270748 | None:intergenic | 50.0% |
| ! | TAAAGATGAGGTGGGAGTGC+TGG | + | chr4.1:9270023-9270042 | MS.gene70297:intron | 50.0% |
| ! | TCTGAGATGCACGTGACTGT+AGG | - | chr4.1:9270601-9270620 | None:intergenic | 50.0% |
| ! | TTCCCTGTTGCCTTTTGCGT+TGG | - | chr4.1:9270788-9270807 | None:intergenic | 50.0% |
| !! | CAGGAGACGGTAATGGATCA+AGG | + | chr4.1:9267953-9267972 | MS.gene70297:CDS | 50.0% |
| !! | CGTGTTGCTCCTGTTGATTC+CGG | + | chr4.1:9269310-9269329 | MS.gene70297:CDS | 50.0% |
| !! | GGTTGGCTAGAGTCCTTTTG+AGG | - | chr4.1:9270712-9270731 | None:intergenic | 50.0% |
| AAAGAAAGAGGGGACGTGGC+TGG | - | chr4.1:9270886-9270905 | None:intergenic | 55.0% | |
| AACAGGAGCAACACGGCCAA+TGG | - | chr4.1:9269305-9269324 | None:intergenic | 55.0% | |
| ATGGCCAGGAGCCTCCATTA+TGG | - | chr4.1:9271997-9272016 | None:intergenic | 55.0% | |
| ATGGCTGCCTCTCCAAAGTC+AGG | - | chr4.1:9269286-9269305 | None:intergenic | 55.0% | |
| ATGTGATCTCAGGGCTGTGG+TGG | + | chr4.1:9269421-9269440 | MS.gene70297:intron | 55.0% | |
| CACTCCTGACCTTCAAGAGC+CGG | - | chr4.1:9271847-9271866 | None:intergenic | 55.0% | |
| GCAGAGTCATCACCTTCCAG+AGG | - | chr4.1:9269244-9269263 | None:intergenic | 55.0% | |
| GCAGGCATCAAACCTTGTCC+TGG | - | chr4.1:9269199-9269218 | None:intergenic | 55.0% | |
| GCCAACCCAAAAGGAAAGCG+CGG | + | chr4.1:9272574-9272593 | MS.gene70297:CDS | 55.0% | |
| GCCAAGAAGGCGATGTAGGT+AGG | - | chr4.1:9270963-9270982 | None:intergenic | 55.0% | |
| GCGATGTAGGTAGGTGGAGT+TGG | - | chr4.1:9270954-9270973 | None:intergenic | 55.0% | |
| GGCATCCACTCCACTAACCA+AGG | - | chr4.1:9271637-9271656 | None:intergenic | 55.0% | |
| GGCCAAATGGTCGGATTTGG+TGG | + | chr4.1:9271795-9271814 | MS.gene70297:CDS | 55.0% | |
| GTTCGGACAGTTCCTCTGGA+AGG | + | chr4.1:9269229-9269248 | MS.gene70297:CDS | 55.0% | |
| TACTCAACGGGGTCCCTATG+AGG | + | chr4.1:9268883-9268902 | MS.gene70297:intron | 55.0% | |
| ! | CCAACCCAAAAGGAAAGCGC+GGG | + | chr4.1:9272575-9272594 | MS.gene70297:CDS | 55.0% |
| ! | CGCGGATTGAGGAACAACAC+TGG | - | chr4.1:9267707-9267726 | None:intergenic | 55.0% |
| ! | CGGGCATCCTTTGGAGATTC+AGG | + | chr4.1:9269623-9269642 | MS.gene70297:CDS | 55.0% |
| ! | GACTTTGGAGAGGCAGCCAT+TGG | + | chr4.1:9269286-9269305 | MS.gene70297:CDS | 55.0% |
| ! | TCCTCCCGCGCTTTCCTTTT+GGG | - | chr4.1:9272582-9272601 | None:intergenic | 55.0% |
| ! | TTCCTCCCGCGCTTTCCTTT+TGG | - | chr4.1:9272583-9272602 | None:intergenic | 55.0% |
| !! | AATTTGGGTTGGGGCTGCAG+AGG | - | chr4.1:9271067-9271086 | None:intergenic | 55.0% |
| CGGCTCTTGAAGGTCAGGAG+TGG | + | chr4.1:9271845-9271864 | MS.gene70297:CDS | 60.0% | |
| CGTTGAGATGGCAGTGGGTG+TGG | - | chr4.1:9271024-9271043 | None:intergenic | 60.0% | |
| CTGCCAGAGAAGTGATGGCC+AGG | - | chr4.1:9272011-9272030 | None:intergenic | 60.0% | |
| CTGGCCATCACTTCTCTGGC+AGG | + | chr4.1:9272009-9272028 | MS.gene70297:CDS | 60.0% | |
| GCTCCTGGCCATCACTTCTC+TGG | + | chr4.1:9272005-9272024 | MS.gene70297:CDS | 60.0% | |
| GGGCATACACGGGCATCCTT+TGG | + | chr4.1:9269614-9269633 | MS.gene70297:CDS | 60.0% | |
| TCAACGGGGTCCCTATGAGG+AGG | + | chr4.1:9268886-9268905 | MS.gene70297:intron | 60.0% | |
| TGAGATGGCAGTGGGTGTGG+AGG | - | chr4.1:9271021-9271040 | None:intergenic | 60.0% | |
| ! | ACCCAAAAGGAAAGCGCGGG+AGG | + | chr4.1:9272578-9272597 | MS.gene70297:CDS | 60.0% |
| !! | ACGGGCACTGAACAATCGGC+TGG | + | chr4.1:9271477-9271496 | MS.gene70297:CDS | 60.0% |
| !! | CCCGCGCTTTCCTTTTGGGT+TGG | - | chr4.1:9272578-9272597 | None:intergenic | 60.0% |
| !! | TTGGGTTGGGGCTGCAGAGG+CGG | - | chr4.1:9271064-9271083 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 9267664 | 9272630 | 9267664 | ID=MS.gene70297 |
| chr4.1 | mRNA | 9267664 | 9272630 | 9267664 | ID=MS.gene70297.t1;Parent=MS.gene70297 |
| chr4.1 | exon | 9267664 | 9268353 | 9267664 | ID=MS.gene70297.t1.exon1;Parent=MS.gene70297.t1 |
| chr4.1 | CDS | 9267664 | 9268353 | 9267664 | ID=cds.MS.gene70297.t1;Parent=MS.gene70297.t1 |
| chr4.1 | exon | 9269166 | 9269331 | 9269166 | ID=MS.gene70297.t1.exon2;Parent=MS.gene70297.t1 |
| chr4.1 | CDS | 9269166 | 9269331 | 9269166 | ID=cds.MS.gene70297.t1;Parent=MS.gene70297.t1 |
| chr4.1 | exon | 9269433 | 9269644 | 9269433 | ID=MS.gene70297.t1.exon3;Parent=MS.gene70297.t1 |
| chr4.1 | CDS | 9269433 | 9269644 | 9269433 | ID=cds.MS.gene70297.t1;Parent=MS.gene70297.t1 |
| chr4.1 | exon | 9271406 | 9271899 | 9271406 | ID=MS.gene70297.t1.exon4;Parent=MS.gene70297.t1 |
| chr4.1 | CDS | 9271406 | 9271899 | 9271406 | ID=cds.MS.gene70297.t1;Parent=MS.gene70297.t1 |
| chr4.1 | exon | 9271982 | 9272030 | 9271982 | ID=MS.gene70297.t1.exon5;Parent=MS.gene70297.t1 |
| chr4.1 | CDS | 9271982 | 9272030 | 9271982 | ID=cds.MS.gene70297.t1;Parent=MS.gene70297.t1 |
| chr4.1 | exon | 9272313 | 9272630 | 9272313 | ID=MS.gene70297.t1.exon6;Parent=MS.gene70297.t1 |
| chr4.1 | CDS | 9272313 | 9272630 | 9272313 | ID=cds.MS.gene70297.t1;Parent=MS.gene70297.t1 |
| Gene Sequence |
| Protein sequence |
