Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78250.t1 | AES91883.1 | 97.9 | 427 | 2 | 2 | 1 | 424 | 1 | 423 | 1.90E-238 | 834.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78250.t1 | Q9LZI2 | 71.4 | 444 | 99 | 9 | 1 | 424 | 1 | 436 | 1.2e-169 | 597.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78250.t1 | G7JLI8 | 97.9 | 427 | 2 | 2 | 1 | 424 | 1 | 423 | 1.4e-238 | 834.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene78250 | -0.830341 | 3.10E-55 | -1.69E-46 |
| MS.gene049251 | MS.gene78250 | 0.814701 | 1.35E-51 | -1.69E-46 |
| MS.gene049633 | MS.gene78250 | -0.814415 | 1.56E-51 | -1.69E-46 |
| MS.gene050170 | MS.gene78250 | -0.819038 | 1.43E-52 | -1.69E-46 |
| MS.gene050323 | MS.gene78250 | -0.804565 | 2.03E-49 | -1.69E-46 |
| MS.gene050338 | MS.gene78250 | 0.849304 | 3.52E-60 | -1.69E-46 |
| MS.gene050577 | MS.gene78250 | -0.827561 | 1.46E-54 | -1.69E-46 |
| MS.gene050612 | MS.gene78250 | -0.804024 | 2.63E-49 | -1.69E-46 |
| MS.gene05080 | MS.gene78250 | -0.801808 | 7.56E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene78250 | -0.823822 | 1.13E-53 | -1.69E-46 |
| MS.gene050871 | MS.gene78250 | -0.822881 | 1.87E-53 | -1.69E-46 |
| MS.gene051044 | MS.gene78250 | 0.80127 | 9.74E-49 | -1.69E-46 |
| MS.gene051138 | MS.gene78250 | 0.801944 | 7.09E-49 | -1.69E-46 |
| MS.gene051439 | MS.gene78250 | 0.847131 | 1.40E-59 | -1.69E-46 |
| MS.gene051517 | MS.gene78250 | 0.851324 | 9.56E-61 | -1.69E-46 |
| MS.gene051651 | MS.gene78250 | 0.818222 | 2.19E-52 | -1.69E-46 |
| MS.gene051838 | MS.gene78250 | -0.833028 | 6.75E-56 | -1.69E-46 |
| MS.gene051863 | MS.gene78250 | 0.81232 | 4.50E-51 | -1.69E-46 |
| MS.gene051914 | MS.gene78250 | 0.825189 | 5.37E-54 | -1.69E-46 |
| MS.gene052129 | MS.gene78250 | 0.807137 | 5.86E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene78250 | -0.816773 | 4.65E-52 | -1.69E-46 |
| MS.gene052308 | MS.gene78250 | 0.813655 | 2.29E-51 | -1.69E-46 |
| MS.gene052494 | MS.gene78250 | 0.813407 | 2.60E-51 | -1.69E-46 |
| MS.gene052503 | MS.gene78250 | -0.834893 | 2.30E-56 | -1.69E-46 |
| MS.gene052506 | MS.gene78250 | -0.808429 | 3.11E-50 | -1.69E-46 |
| MS.gene052823 | MS.gene78250 | -0.836799 | 7.57E-57 | -1.69E-46 |
| MS.gene052825 | MS.gene78250 | -0.837796 | 4.21E-57 | -1.69E-46 |
| MS.gene053097 | MS.gene78250 | 0.811832 | 5.75E-51 | -1.69E-46 |
| MS.gene053173 | MS.gene78250 | 0.804456 | 2.14E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene78250 | -0.819875 | 9.23E-53 | -1.69E-46 |
| MS.gene053479 | MS.gene78250 | -0.817702 | 2.88E-52 | -1.69E-46 |
| MS.gene053480 | MS.gene78250 | -0.8181 | 2.34E-52 | -1.69E-46 |
| MS.gene053824 | MS.gene78250 | -0.80429 | 2.32E-49 | -1.69E-46 |
| MS.gene054344 | MS.gene78250 | -0.816388 | 5.68E-52 | -1.69E-46 |
| MS.gene054633 | MS.gene78250 | 0.826972 | 2.02E-54 | -1.69E-46 |
| MS.gene054662 | MS.gene78250 | 0.817228 | 3.68E-52 | -1.69E-46 |
| MS.gene054706 | MS.gene78250 | 0.807373 | 5.22E-50 | -1.69E-46 |
| MS.gene05470 | MS.gene78250 | -0.844989 | 5.37E-59 | -1.69E-46 |
| MS.gene054941 | MS.gene78250 | 0.801486 | 8.80E-49 | -1.69E-46 |
| MS.gene055251 | MS.gene78250 | 0.825334 | 4.96E-54 | -1.69E-46 |
| MS.gene055502 | MS.gene78250 | -0.809717 | 1.65E-50 | -1.69E-46 |
| MS.gene055577 | MS.gene78250 | -0.811462 | 6.92E-51 | -1.69E-46 |
| MS.gene055729 | MS.gene78250 | 0.807225 | 5.61E-50 | -1.69E-46 |
| MS.gene055730 | MS.gene78250 | 0.808302 | 3.31E-50 | -1.69E-46 |
| MS.gene055731 | MS.gene78250 | 0.810129 | 1.34E-50 | -1.69E-46 |
| MS.gene055748 | MS.gene78250 | -0.832901 | 7.25E-56 | -1.69E-46 |
| MS.gene055750 | MS.gene78250 | -0.818644 | 1.76E-52 | -1.69E-46 |
| MS.gene055751 | MS.gene78250 | -0.824822 | 6.56E-54 | -1.69E-46 |
| MS.gene05589 | MS.gene78250 | -0.848944 | 4.44E-60 | -1.69E-46 |
| MS.gene056387 | MS.gene78250 | -0.818563 | 1.84E-52 | -1.69E-46 |
| MS.gene056504 | MS.gene78250 | -0.817793 | 2.74E-52 | -1.69E-46 |
| MS.gene05652 | MS.gene78250 | 0.809221 | 2.11E-50 | -1.69E-46 |
| MS.gene056694 | MS.gene78250 | 0.818637 | 1.77E-52 | -1.69E-46 |
| MS.gene056697 | MS.gene78250 | 0.821318 | 4.30E-53 | -1.69E-46 |
| MS.gene057658 | MS.gene78250 | -0.813826 | 2.10E-51 | -1.69E-46 |
| MS.gene057717 | MS.gene78250 | 0.804523 | 2.07E-49 | -1.69E-46 |
| MS.gene058334 | MS.gene78250 | 0.84642 | 2.20E-59 | -1.69E-46 |
| MS.gene058382 | MS.gene78250 | 0.831726 | 1.42E-55 | -1.69E-46 |
| MS.gene058416 | MS.gene78250 | 0.812677 | 3.76E-51 | -1.69E-46 |
| MS.gene058452 | MS.gene78250 | 0.83502 | 2.14E-56 | -1.69E-46 |
| MS.gene058544 | MS.gene78250 | -0.813147 | 2.97E-51 | -1.69E-46 |
| MS.gene058838 | MS.gene78250 | -0.844014 | 9.83E-59 | -1.69E-46 |
| MS.gene058853 | MS.gene78250 | 0.81591 | 7.26E-52 | -1.69E-46 |
| MS.gene059023 | MS.gene78250 | -0.801343 | 9.42E-49 | -1.69E-46 |
| MS.gene05926 | MS.gene78250 | 0.852781 | 3.69E-61 | -1.69E-46 |
| MS.gene059304 | MS.gene78250 | 0.822959 | 1.79E-53 | -1.69E-46 |
| MS.gene05960 | MS.gene78250 | 0.823992 | 1.03E-53 | -1.69E-46 |
| MS.gene059667 | MS.gene78250 | -0.81639 | 5.67E-52 | -1.69E-46 |
| MS.gene059699 | MS.gene78250 | 0.815116 | 1.09E-51 | -1.69E-46 |
| MS.gene059703 | MS.gene78250 | 0.819865 | 9.28E-53 | -1.69E-46 |
| MS.gene059865 | MS.gene78250 | -0.800067 | 1.71E-48 | -1.69E-46 |
| MS.gene06000 | MS.gene78250 | -0.809104 | 2.23E-50 | -1.69E-46 |
| MS.gene060087 | MS.gene78250 | 0.802911 | 4.48E-49 | -1.69E-46 |
| MS.gene060405 | MS.gene78250 | 0.83581 | 1.35E-56 | -1.69E-46 |
| MS.gene060762 | MS.gene78250 | -0.804834 | 1.79E-49 | -1.69E-46 |
| MS.gene06084 | MS.gene78250 | 0.814144 | 1.79E-51 | -1.69E-46 |
| MS.gene06093 | MS.gene78250 | 0.815351 | 9.67E-52 | -1.69E-46 |
| MS.gene060982 | MS.gene78250 | -0.817427 | 3.32E-52 | -1.69E-46 |
| MS.gene061038 | MS.gene78250 | 0.801055 | 1.08E-48 | -1.69E-46 |
| MS.gene061044 | MS.gene78250 | 0.842817 | 2.05E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78250.t1 | MTR_4g120030 | 97.892 | 427 | 2 | 2 | 1 | 424 | 1 | 423 | 0.0 | 852 |
| MS.gene78250.t1 | MTR_1g088480 | 69.977 | 433 | 118 | 3 | 1 | 424 | 1 | 430 | 0.0 | 604 |
| MS.gene78250.t1 | MTR_1g067530 | 63.124 | 461 | 115 | 9 | 5 | 422 | 10 | 458 | 0.0 | 542 |
| MS.gene78250.t1 | MTR_4g063600 | 73.684 | 304 | 77 | 2 | 113 | 413 | 33 | 336 | 3.55e-165 | 468 |
| MS.gene78250.t1 | MTR_4g063600 | 72.964 | 307 | 77 | 2 | 113 | 413 | 33 | 339 | 5.55e-165 | 467 |
| MS.gene78250.t1 | MTR_2g096660 | 70.846 | 319 | 87 | 2 | 101 | 413 | 27 | 345 | 1.40e-163 | 464 |
| MS.gene78250.t1 | MTR_1g080950 | 28.165 | 316 | 208 | 8 | 113 | 413 | 29 | 340 | 2.63e-28 | 115 |
| MS.gene78250.t1 | MTR_1g080950 | 28.165 | 316 | 208 | 8 | 113 | 413 | 65 | 376 | 5.82e-28 | 114 |
| MS.gene78250.t1 | MTR_7g115080 | 28.254 | 315 | 208 | 8 | 113 | 413 | 30 | 340 | 7.18e-28 | 114 |
| MS.gene78250.t1 | MTR_7g115080 | 28.254 | 315 | 208 | 8 | 113 | 413 | 64 | 374 | 7.93e-28 | 114 |
| MS.gene78250.t1 | MTR_7g115080 | 28.254 | 315 | 208 | 8 | 113 | 413 | 43 | 353 | 1.22e-27 | 113 |
| MS.gene78250.t1 | MTR_2g073240 | 27.937 | 315 | 194 | 11 | 112 | 402 | 19 | 324 | 1.06e-25 | 110 |
| MS.gene78250.t1 | MTR_0034s0060 | 26.979 | 341 | 216 | 12 | 106 | 422 | 131 | 462 | 1.12e-25 | 110 |
| MS.gene78250.t1 | MTR_4g056100 | 26.330 | 376 | 200 | 16 | 114 | 423 | 21 | 385 | 8.24e-23 | 99.8 |
| MS.gene78250.t1 | MTR_1g009600 | 25.672 | 335 | 216 | 13 | 112 | 422 | 5 | 330 | 1.41e-22 | 100 |
| MS.gene78250.t1 | MTR_4g053420 | 24.638 | 345 | 201 | 11 | 114 | 402 | 16 | 357 | 4.97e-22 | 97.4 |
| MS.gene78250.t1 | MTR_4g102270 | 25.866 | 433 | 254 | 14 | 14 | 402 | 4 | 413 | 2.96e-20 | 92.8 |
| MS.gene78250.t1 | MTR_0354s0040 | 24.879 | 414 | 250 | 15 | 32 | 406 | 15 | 406 | 1.10e-19 | 90.9 |
| MS.gene78250.t1 | MTR_1g108530 | 25.526 | 333 | 198 | 12 | 114 | 402 | 21 | 347 | 1.22e-19 | 90.5 |
| MS.gene78250.t1 | MTR_4g024600 | 24.318 | 440 | 254 | 15 | 24 | 406 | 8 | 425 | 3.55e-19 | 89.7 |
| MS.gene78250.t1 | MTR_4g129820 | 24.146 | 439 | 258 | 17 | 21 | 406 | 3 | 419 | 2.76e-17 | 84.0 |
| MS.gene78250.t1 | MTR_4g134490 | 27.893 | 337 | 193 | 13 | 107 | 400 | 20 | 349 | 3.35e-17 | 83.2 |
| MS.gene78250.t1 | MTR_3g084090 | 25.610 | 410 | 241 | 17 | 35 | 402 | 32 | 419 | 5.98e-17 | 82.8 |
| MS.gene78250.t1 | MTR_4g056100 | 26.441 | 295 | 156 | 13 | 114 | 356 | 21 | 306 | 1.31e-16 | 80.5 |
| MS.gene78250.t1 | MTR_4g134490 | 28.182 | 330 | 187 | 13 | 107 | 393 | 20 | 342 | 1.47e-16 | 81.3 |
| MS.gene78250.t1 | MTR_8g089180 | 27.576 | 330 | 191 | 13 | 114 | 402 | 73 | 395 | 1.92e-15 | 78.2 |
| MS.gene78250.t1 | MTR_8g089180 | 27.576 | 330 | 191 | 13 | 114 | 402 | 73 | 395 | 1.92e-15 | 78.2 |
| MS.gene78250.t1 | MTR_2g032100 | 26.875 | 320 | 185 | 12 | 114 | 392 | 73 | 384 | 5.05e-15 | 77.0 |
| MS.gene78250.t1 | MTR_5g009160 | 28.866 | 291 | 153 | 17 | 111 | 357 | 3 | 283 | 6.41e-14 | 73.2 |
| MS.gene78250.t1 | MTR_4g056100 | 25.564 | 266 | 145 | 10 | 114 | 333 | 21 | 279 | 1.21e-13 | 71.6 |
| MS.gene78250.t1 | MTR_8g099535 | 26.727 | 333 | 192 | 16 | 111 | 400 | 3 | 326 | 1.50e-13 | 72.0 |
| MS.gene78250.t1 | MTR_5g009170 | 25.602 | 332 | 199 | 15 | 110 | 400 | 45 | 369 | 9.62e-13 | 69.7 |
| MS.gene78250.t1 | MTR_8g096880 | 26.048 | 334 | 193 | 17 | 112 | 400 | 6 | 330 | 2.60e-12 | 68.2 |
| MS.gene78250.t1 | MTR_8g096880 | 26.220 | 328 | 188 | 17 | 111 | 393 | 5 | 323 | 4.94e-12 | 67.0 |
| MS.gene78250.t1 | MTR_2g032100 | 31.915 | 188 | 100 | 9 | 114 | 281 | 73 | 252 | 1.50e-11 | 65.5 |
| MS.gene78250.t1 | MTR_5g021760 | 25.000 | 336 | 198 | 12 | 111 | 406 | 23 | 344 | 5.84e-11 | 64.3 |
| MS.gene78250.t1 | MTR_5g021770 | 25.000 | 336 | 198 | 12 | 111 | 406 | 23 | 344 | 9.33e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78250.t1 | AT3G62830 | 71.591 | 440 | 97 | 9 | 1 | 420 | 1 | 432 | 0.0 | 607 |
| MS.gene78250.t1 | AT3G62830 | 71.591 | 440 | 97 | 9 | 1 | 420 | 1 | 432 | 0.0 | 607 |
| MS.gene78250.t1 | AT2G47650 | 71.461 | 438 | 95 | 10 | 1 | 416 | 1 | 430 | 0.0 | 602 |
| MS.gene78250.t1 | AT2G47650 | 70.721 | 444 | 94 | 11 | 1 | 416 | 1 | 436 | 0.0 | 597 |
| MS.gene78250.t1 | AT3G53520 | 66.129 | 434 | 123 | 7 | 6 | 420 | 4 | 432 | 0.0 | 563 |
| MS.gene78250.t1 | AT3G53520 | 65.668 | 434 | 123 | 8 | 6 | 420 | 4 | 430 | 0.0 | 555 |
| MS.gene78250.t1 | AT3G53520 | 63.020 | 457 | 122 | 8 | 6 | 420 | 4 | 455 | 0.0 | 552 |
| MS.gene78250.t1 | AT2G28760 | 73.616 | 307 | 75 | 2 | 113 | 413 | 32 | 338 | 2.22e-167 | 473 |
| MS.gene78250.t1 | AT2G28760 | 73.616 | 307 | 75 | 2 | 113 | 413 | 32 | 338 | 2.22e-167 | 473 |
| MS.gene78250.t1 | AT2G28760 | 73.616 | 307 | 75 | 2 | 113 | 413 | 32 | 338 | 2.22e-167 | 473 |
| MS.gene78250.t1 | AT2G28760 | 73.616 | 307 | 75 | 2 | 113 | 413 | 63 | 369 | 3.00e-167 | 474 |
| MS.gene78250.t1 | AT3G46440 | 72.964 | 307 | 77 | 2 | 113 | 413 | 30 | 336 | 2.28e-166 | 471 |
| MS.gene78250.t1 | AT3G46440 | 72.964 | 307 | 77 | 2 | 113 | 413 | 30 | 336 | 2.28e-166 | 471 |
| MS.gene78250.t1 | AT5G59290 | 72.638 | 307 | 78 | 2 | 113 | 413 | 31 | 337 | 1.30e-165 | 469 |
| MS.gene78250.t1 | AT5G59290 | 72.638 | 307 | 78 | 2 | 113 | 413 | 46 | 352 | 1.33e-165 | 469 |
| MS.gene78250.t1 | AT5G59290 | 72.638 | 307 | 78 | 2 | 113 | 413 | 2 | 308 | 2.51e-165 | 467 |
| MS.gene78250.t1 | AT5G59290 | 72.638 | 307 | 78 | 2 | 113 | 413 | 24 | 330 | 7.50e-165 | 466 |
| MS.gene78250.t1 | AT3G53520 | 64.497 | 338 | 97 | 6 | 6 | 324 | 4 | 337 | 4.61e-145 | 417 |
| MS.gene78250.t1 | AT5G28840 | 28.395 | 324 | 213 | 8 | 113 | 421 | 29 | 348 | 3.08e-27 | 112 |
| MS.gene78250.t1 | AT5G28840 | 28.395 | 324 | 213 | 8 | 113 | 421 | 29 | 348 | 3.08e-27 | 112 |
| MS.gene78250.t1 | AT3G14790 | 27.414 | 321 | 200 | 11 | 106 | 402 | 1 | 312 | 1.01e-26 | 113 |
| MS.gene78250.t1 | AT3G14790 | 27.414 | 321 | 200 | 11 | 106 | 402 | 4 | 315 | 1.27e-26 | 112 |
| MS.gene78250.t1 | AT1G53500 | 27.300 | 337 | 212 | 11 | 110 | 422 | 7 | 334 | 3.44e-26 | 111 |
| MS.gene78250.t1 | AT1G78570 | 27.859 | 341 | 213 | 11 | 106 | 422 | 1 | 332 | 1.69e-25 | 109 |
| MS.gene78250.t1 | AT4G00110 | 24.594 | 431 | 263 | 15 | 32 | 424 | 23 | 429 | 2.55e-19 | 90.1 |
| MS.gene78250.t1 | AT2G45310 | 26.879 | 346 | 209 | 12 | 114 | 423 | 99 | 436 | 5.14e-19 | 89.4 |
| MS.gene78250.t1 | AT1G02000 | 24.769 | 432 | 267 | 14 | 30 | 424 | 24 | 434 | 2.84e-18 | 87.0 |
| MS.gene78250.t1 | AT4G30440 | 25.124 | 402 | 236 | 15 | 50 | 406 | 31 | 412 | 1.89e-16 | 81.3 |
| MS.gene78250.t1 | AT5G44480 | 25.758 | 330 | 176 | 12 | 114 | 392 | 73 | 384 | 8.19e-16 | 79.3 |
| MS.gene78250.t1 | AT5G44480 | 25.758 | 330 | 176 | 12 | 114 | 392 | 73 | 384 | 8.19e-16 | 79.3 |
| MS.gene78250.t1 | AT5G44480 | 25.758 | 330 | 176 | 12 | 114 | 392 | 73 | 384 | 8.19e-16 | 79.3 |
| MS.gene78250.t1 | AT5G44480 | 25.758 | 330 | 176 | 12 | 114 | 392 | 97 | 408 | 9.76e-16 | 79.3 |
| MS.gene78250.t1 | AT4G23920 | 27.273 | 330 | 192 | 15 | 112 | 400 | 3 | 325 | 4.53e-15 | 76.6 |
| MS.gene78250.t1 | AT3G23820 | 24.936 | 389 | 226 | 15 | 61 | 402 | 63 | 432 | 1.20e-14 | 75.9 |
| MS.gene78250.t1 | AT4G12250 | 24.409 | 381 | 213 | 15 | 82 | 406 | 59 | 420 | 1.61e-14 | 75.5 |
| MS.gene78250.t1 | AT4G20460 | 26.513 | 347 | 199 | 15 | 101 | 402 | 59 | 394 | 4.01e-14 | 74.3 |
| MS.gene78250.t1 | AT4G10960 | 26.586 | 331 | 193 | 15 | 112 | 400 | 4 | 326 | 1.46e-13 | 72.0 |
| MS.gene78250.t1 | AT1G30620 | 26.347 | 334 | 190 | 14 | 114 | 402 | 73 | 395 | 2.00e-13 | 72.0 |
| MS.gene78250.t1 | AT1G30620 | 26.347 | 334 | 190 | 14 | 114 | 402 | 73 | 395 | 2.00e-13 | 72.0 |
| MS.gene78250.t1 | AT1G30620 | 26.347 | 334 | 190 | 14 | 114 | 402 | 73 | 395 | 2.00e-13 | 72.0 |
| MS.gene78250.t1 | AT1G30620 | 26.347 | 334 | 190 | 14 | 114 | 402 | 73 | 395 | 2.00e-13 | 72.0 |
| MS.gene78250.t1 | AT1G30620 | 26.347 | 334 | 190 | 14 | 114 | 402 | 72 | 394 | 2.02e-13 | 72.0 |
| MS.gene78250.t1 | AT2G28755 | 47.368 | 57 | 30 | 0 | 322 | 378 | 4 | 60 | 5.11e-13 | 63.9 |
| MS.gene78250.t1 | AT1G12780 | 26.331 | 338 | 199 | 15 | 106 | 400 | 1 | 331 | 8.25e-13 | 69.7 |
| MS.gene78250.t1 | AT1G63180 | 25.000 | 336 | 206 | 13 | 106 | 400 | 1 | 331 | 2.23e-12 | 68.6 |
| MS.gene78250.t1 | AT1G64440 | 26.444 | 329 | 192 | 15 | 114 | 400 | 5 | 325 | 4.13e-11 | 64.7 |
Find 116 sgRNAs with CRISPR-Local
Find 179 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTTCAAGCAAAGATTATT+TGG | 0.187494 | 8.4:-11957726 | MS.gene78250:CDS |
| ATGTCTAATAAGTTCAAAAT+TGG | 0.198229 | 8.4:+11959835 | None:intergenic |
| AGCATGTTTGTTCTCGTTCT+TGG | 0.257092 | 8.4:+11960220 | None:intergenic |
| CATGTTGGGCCTTTCAATCT+TGG | 0.261249 | 8.4:-11958103 | MS.gene78250:CDS |
| CGTGATTGATAATTACTTTA+CGG | 0.266771 | 8.4:-11959894 | MS.gene78250:CDS |
| ATCCTCAAGCTGAGACTTAC+TGG | 0.291310 | 8.4:-11959333 | MS.gene78250:CDS |
| CTTTCAATTTGTTTCAGATT+TGG | 0.295831 | 8.4:-11958758 | MS.gene78250:intron |
| TTTCAGATTGATCTCTTGTT+TGG | 0.296925 | 8.4:+11960284 | None:intergenic |
| CGAGTCCCTTTCCTTCTCAT+TGG | 0.317422 | 8.4:-11960190 | MS.gene78250:CDS |
| GACTCGGCGGGTTCTGTTAG+AGG | 0.318262 | 8.4:-11960065 | MS.gene78250:CDS |
| TTGAAATCAGCAACCATTAG+AGG | 0.329216 | 8.4:+11957741 | None:intergenic |
| CCATCATCAATGCACATTCT+TGG | 0.332578 | 8.4:+11958950 | None:intergenic |
| TCCAAAGCAAAAGAGCTTCT+TGG | 0.337199 | 8.4:-11957798 | MS.gene78250:CDS |
| CTGAATTCTATCTTTGCGTT+GGG | 0.345685 | 8.4:+11957864 | None:intergenic |
| TGGATCGAGAAGGGAGATAG+TGG | 0.356821 | 8.4:+11960143 | None:intergenic |
| GTGATTGATAATTACTTTAC+GGG | 0.378536 | 8.4:-11959893 | MS.gene78250:CDS |
| AAGGATCCATTGACTGTCTA+TGG | 0.380493 | 8.4:-11958802 | MS.gene78250:CDS |
| AAAACGTGTTGCTGAGACTT+TGG | 0.384940 | 8.4:-11959143 | MS.gene78250:CDS |
| CCGTGAGGGACTTCCTCTAA+TGG | 0.387873 | 8.4:-11957754 | MS.gene78250:CDS |
| GGATTAAACTTGTAATGAAC+AGG | 0.392430 | 8.4:+11959749 | None:intergenic |
| ATGTCTGGCTTTCTCTTATG+TGG | 0.404114 | 8.4:+11957822 | None:intergenic |
| CCTTTCAATCTTGGCAATCC+TGG | 0.406224 | 8.4:-11958094 | MS.gene78250:CDS |
| GAGAATGTTGTACATCATAT+TGG | 0.418661 | 8.4:-11959863 | MS.gene78250:CDS |
| TGTCTAATAAGTTCAAAATT+GGG | 0.421635 | 8.4:+11959836 | None:intergenic |
| TGATGGAAGGCGAACATGTT+GGG | 0.437657 | 8.4:-11958117 | MS.gene78250:CDS |
| CACCATGCTTGAACTTGCTC+AGG | 0.447788 | 8.4:-11958065 | MS.gene78250:intron |
| CAGAAGAGAGTACTGGTTAC+CGG | 0.448087 | 8.4:-11959980 | MS.gene78250:CDS |
| TTTGTTCTCGTTCTTGGAAG+AGG | 0.448200 | 8.4:+11960226 | None:intergenic |
| TTGTAATGAACAGGGGAAGC+AGG | 0.449020 | 8.4:+11959758 | None:intergenic |
| AGCAAAGATTATTTGGTGAC+GGG | 0.459001 | 8.4:-11957719 | MS.gene78250:CDS |
| TGATCAACTTCAAGAAGAAT+AGG | 0.459638 | 8.4:+11959800 | None:intergenic |
| TCTGAATTCTATCTTTGCGT+TGG | 0.460754 | 8.4:+11957863 | None:intergenic |
| GTGGGGACACTAAACATGTT+AGG | 0.462472 | 8.4:-11959427 | MS.gene78250:CDS |
| CCATCGCCATAGACAGTCAA+TGG | 0.480004 | 8.4:+11958796 | None:intergenic |
| GTGGAAGAGTGGATCGAGAA+GGG | 0.481083 | 8.4:+11960134 | None:intergenic |
| AAGATGACTTCCAACGAAAC+CGG | 0.483644 | 8.4:+11959952 | None:intergenic |
| ATGGATTACCACAGAGGAGC+TGG | 0.486727 | 8.4:-11959118 | MS.gene78250:CDS |
| CGAAGAGTTCCATTGGCCGT+TGG | 0.493295 | 8.4:-11960019 | MS.gene78250:CDS |
| CCAAGAATGTGCATTGATGA+TGG | 0.497186 | 8.4:-11958950 | MS.gene78250:CDS |
| AAGCAAAAGAGCTTCTTGGC+TGG | 0.502105 | 8.4:-11957794 | MS.gene78250:CDS |
| TCCTCAAGCTGAGACTTACT+GGG | 0.502132 | 8.4:-11959332 | MS.gene78250:CDS |
| CCATTGACTGTCTATGGCGA+TGG | 0.505545 | 8.4:-11958796 | MS.gene78250:CDS |
| TGTTGCTGAGACTTTGGCTA+TGG | 0.506401 | 8.4:-11959137 | MS.gene78250:CDS |
| GTTAACTCTTCCGACTCGGC+GGG | 0.509194 | 8.4:-11960077 | MS.gene78250:CDS |
| CCAGGATTGCCAAGATTGAA+AGG | 0.510454 | 8.4:+11958094 | None:intergenic |
| ACCGGTGGAGCCGGTTTCGT+TGG | 0.513391 | 8.4:-11959962 | MS.gene78250:CDS |
| TCCAACGAAACCGGCTCCAC+CGG | 0.522129 | 8.4:+11959961 | None:intergenic |
| GGTCAGTAACTTCGTTGCTC+AGG | 0.523665 | 8.4:-11958921 | MS.gene78250:intron |
| GCTATTCCAATGAGAAGGAA+AGG | 0.524748 | 8.4:+11960184 | None:intergenic |
| GACACTAAACATGTTAGGAT+TGG | 0.525969 | 8.4:-11959422 | MS.gene78250:CDS |
| AAGCAAAGATTATTTGGTGA+CGG | 0.525987 | 8.4:-11957720 | MS.gene78250:CDS |
| CAAAGGTGCAGCTGCAGCAT+AGG | 0.532375 | 8.4:-11957694 | None:intergenic |
| GTAAGAAGTTGTTATGATGA+GGG | 0.536932 | 8.4:-11959166 | MS.gene78250:CDS |
| TTTCGTTGGAAGTCATCTTG+TGG | 0.537156 | 8.4:-11959948 | MS.gene78250:CDS |
| CAAGAGACAGAAGAGAGTAC+TGG | 0.540150 | 8.4:-11959987 | MS.gene78250:CDS |
| GAGATAGTGGAAGAAGAGAG+TGG | 0.540497 | 8.4:+11960156 | None:intergenic |
| AGTTGATCAGATCTATCACT+TGG | 0.542611 | 8.4:-11959786 | MS.gene78250:CDS |
| GTACTGGTTACCGGTGGAGC+CGG | 0.546414 | 8.4:-11959971 | MS.gene78250:CDS |
| TGTAAGAAGTTGTTATGATG+AGG | 0.548578 | 8.4:-11959167 | MS.gene78250:CDS |
| CTTTATGCAGGCATTGAGGA+AGG | 0.549255 | 8.4:-11958821 | MS.gene78250:intron |
| TTGATAATTACTTTACGGGA+AGG | 0.549310 | 8.4:-11959889 | MS.gene78250:CDS |
| GTGGATCGTTTGATTGAAAG+AGG | 0.551694 | 8.4:-11959929 | MS.gene78250:CDS |
| GTTAGGATTGGCAAAGAGAG+TGG | 0.554980 | 8.4:-11959410 | MS.gene78250:CDS |
| TGTGGAAGAGTGGATCGAGA+AGG | 0.559049 | 8.4:+11960133 | None:intergenic |
| TCAAGCATGGTGAATTCACC+AGG | 0.564050 | 8.4:+11958076 | None:intergenic |
| CTATTCCAATGAGAAGGAAA+GGG | 0.569018 | 8.4:+11960185 | None:intergenic |
| GGCTTGATGAGGCTGATGGA+AGG | 0.571519 | 8.4:-11958130 | MS.gene78250:CDS |
| AAGAAAACGAAGAGTTCCAT+TGG | 0.571610 | 8.4:-11960026 | MS.gene78250:CDS |
| TGGCACAAGACGAATGTGGT+GGG | 0.572374 | 8.4:-11959445 | MS.gene78250:intron |
| TGTAATGAACAGGGGAAGCA+GGG | 0.573819 | 8.4:+11959759 | None:intergenic |
| CCACAGAGGAGCTGGCATTG+AGG | 0.576827 | 8.4:-11959110 | MS.gene78250:intron |
| CATTGACTGTCTATGGCGAT+GGG | 0.579490 | 8.4:-11958795 | MS.gene78250:CDS |
| AGAGGGCTTGATGAGGCTGA+TGG | 0.581225 | 8.4:-11958134 | MS.gene78250:CDS |
| CCCCAGTAAGTCTCAGCTTG+AGG | 0.582638 | 8.4:+11959331 | None:intergenic |
| TGAATTCTATCTTTGCGTTG+GGG | 0.585843 | 8.4:+11957865 | None:intergenic |
| TAAACTTTATGCAGGCATTG+AGG | 0.588893 | 8.4:-11958825 | MS.gene78250:intron |
| CTGATGGAAGGCGAACATGT+TGG | 0.597456 | 8.4:-11958118 | MS.gene78250:CDS |
| TCAGCTTGAGGATGTTGAAG+TGG | 0.597705 | 8.4:+11959343 | None:intergenic |
| GATGATGAATCGTGATGTTG+TGG | 0.601310 | 8.4:+11960115 | None:intergenic |
| TTATTTGGTGACGGGGACAA+AGG | 0.602502 | 8.4:-11957711 | MS.gene78250:CDS |
| CCGAGTCGGAAGAGTTAACT+CGG | 0.603655 | 8.4:+11960081 | None:intergenic |
| CAAGAATGTGCATTGATGAT+GGG | 0.605694 | 8.4:-11958949 | MS.gene78250:CDS |
| AAATAGCTATTCCAATGAGA+AGG | 0.607007 | 8.4:+11960179 | None:intergenic |
| ACCATCTGTGTCCCTCCGTG+AGG | 0.607169 | 8.4:-11957769 | MS.gene78250:CDS |
| CCGAGTTAACTCTTCCGACT+CGG | 0.612607 | 8.4:-11960081 | MS.gene78250:CDS |
| TAGAGGAAGTCCCTCACGGA+GGG | 0.612821 | 8.4:+11957758 | None:intergenic |
| CCATCTGTGTCCCTCCGTGA+GGG | 0.613759 | 8.4:-11957768 | MS.gene78250:CDS |
| TTTGCTGACTAGTACAAGTG+AGG | 0.617496 | 8.4:-11959377 | MS.gene78250:CDS |
| ATCGTGATGTTGTGGAAGAG+TGG | 0.625699 | 8.4:+11960123 | None:intergenic |
| AAACTTTATTATTACCAATG+GGG | 0.626498 | 8.4:+11959299 | None:intergenic |
| AGTTAACTCTTCCGACTCGG+CGG | 0.628097 | 8.4:-11960078 | MS.gene78250:CDS |
| TCTAACAGAACCCGCCGAGT+CGG | 0.631912 | 8.4:+11960067 | None:intergenic |
| TACCTGAGCAAGTTCAAGCA+TGG | 0.632398 | 8.4:+11958063 | None:intergenic |
| TTAGGATTGGCAAAGAGAGT+GGG | 0.633906 | 8.4:-11959409 | MS.gene78250:CDS |
| TTGGCACAAGACGAATGTGG+TGG | 0.637095 | 8.4:-11959446 | MS.gene78250:intron |
| GGCACAAGACGAATGTGGTG+GGG | 0.639098 | 8.4:-11959444 | MS.gene78250:intron |
| CCCTCACGGAGGGACACAGA+TGG | 0.642045 | 8.4:+11957768 | None:intergenic |
| GATTAAACTTGTAATGAACA+GGG | 0.642045 | 8.4:+11959750 | None:intergenic |
| GATAGAATTCAGAGCAAACA+CGG | 0.642866 | 8.4:-11957853 | MS.gene78250:CDS |
| GCAAAGATTATTTGGTGACG+GGG | 0.645290 | 8.4:-11957718 | MS.gene78250:CDS |
| CCATTAGAGGAAGTCCCTCA+CGG | 0.649760 | 8.4:+11957754 | None:intergenic |
| ACTAGTACAAGTGAGGTGTA+CGG | 0.654296 | 8.4:-11959370 | MS.gene78250:CDS |
| CGGGTTCTGTTAGAGGAACA+CGG | 0.655861 | 8.4:-11960058 | MS.gene78250:CDS |
| TACATATGACAACAGGTAGA+GGG | 0.657221 | 8.4:-11958151 | MS.gene78250:intron |
| AACAGGTAGAGGGCTTGATG+AGG | 0.660734 | 8.4:-11958141 | MS.gene78250:intron |
| CCTCAATGCCAGCTCCTCTG+TGG | 0.660878 | 8.4:+11959110 | None:intergenic |
| GTGCATTGATGATGGGCGTG+TGG | 0.671735 | 8.4:-11958942 | MS.gene78250:CDS |
| ATTAAACTTGTAATGAACAG+GGG | 0.672549 | 8.4:+11959751 | None:intergenic |
| CCTCAAGCTGAGACTTACTG+GGG | 0.692032 | 8.4:-11959331 | MS.gene78250:CDS |
| ACGATGTGATGATGAATCTG+TGG | 0.708850 | 8.4:+11960255 | None:intergenic |
| CTCAAGCTGAGACTTACTGG+GGG | 0.710262 | 8.4:-11959330 | MS.gene78250:CDS |
| AAGAGAGTACTGGTTACCGG+TGG | 0.713952 | 8.4:-11959977 | MS.gene78250:CDS |
| AATTTGGCACAAGACGAATG+TGG | 0.732807 | 8.4:-11959449 | MS.gene78250:intron |
| TTGGCTATGGATTACCACAG+AGG | 0.735724 | 8.4:-11959124 | MS.gene78250:CDS |
| TTAGAGGAAGTCCCTCACGG+AGG | 0.764561 | 8.4:+11957757 | None:intergenic |
| AGAATTCAGAGCAAACACGG+AGG | 0.792891 | 8.4:-11957850 | MS.gene78250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTATTTTATTTTATT+TGG | - | chr8.4:11958794-11958813 | MS.gene78250:CDS | 0.0% |
| !! | AAAATATAGAAAGTAATTAA+TGG | + | chr8.4:11959439-11959458 | None:intergenic | 10.0% |
| !! | AATAAGTAAATAAACAAAAT+TGG | + | chr8.4:11958306-11958325 | None:intergenic | 10.0% |
| !!! | TAAAATTGATAATTAGTTAA+AGG | + | chr8.4:11959162-11959181 | None:intergenic | 10.0% |
| !! | AAATAAACAAAATTGGAAAA+AGG | + | chr8.4:11958299-11958318 | None:intergenic | 15.0% |
| !! | AAGTAAATAGTGAAAAAATA+TGG | + | chr8.4:11959124-11959143 | None:intergenic | 15.0% |
| !! | ATAAACTTTATTATTACCAA+TGG | + | chr8.4:11958711-11958730 | None:intergenic | 15.0% |
| !! | TAAACTTTATTATTACCAAT+GGG | + | chr8.4:11958710-11958729 | None:intergenic | 15.0% |
| !!! | ATTATCCTTCTAATTTTTTT+TGG | - | chr8.4:11959741-11959760 | MS.gene78250:intron | 15.0% |
| !!! | CAATTTTAATTGATCTTATA+AGG | - | chr8.4:11959344-11959363 | MS.gene78250:CDS | 15.0% |
| !!! | CATATTTTTTCTTATCAAAA+TGG | + | chr8.4:11958492-11958511 | None:intergenic | 15.0% |
| !!! | TATAATAAATCTTTTGAACA+TGG | - | chr8.4:11960067-11960086 | MS.gene78250:CDS | 15.0% |
| !!! | TATATATACTAGCTTTAATT+TGG | + | chr8.4:11960029-11960048 | None:intergenic | 15.0% |
| !!! | TGATATTTGATTGAAAATTT+TGG | - | chr8.4:11958517-11958536 | MS.gene78250:intron | 15.0% |
| !!! | TTTTGAACTTAATAATTGTT+AGG | - | chr8.4:11959000-11959019 | MS.gene78250:intron | 15.0% |
| !! | AAACTTTATTATTACCAATG+GGG | + | chr8.4:11958709-11958728 | None:intergenic | 20.0% |
| !! | AAATTAGAAGGATAATTCAA+CGG | + | chr8.4:11959737-11959756 | None:intergenic | 20.0% |
| !! | AATCCTTGATTCTAATAATT+TGG | - | chr8.4:11958540-11958559 | MS.gene78250:intron | 20.0% |
| !! | ATGTCTAATAAGTTCAAAAT+TGG | + | chr8.4:11958173-11958192 | None:intergenic | 20.0% |
| !! | CTTAGTAAAAGTTAAAATCA+AGG | + | chr8.4:11958762-11958781 | None:intergenic | 20.0% |
| !! | GAATATTTGAACATGTAAAA+AGG | + | chr8.4:11959289-11959308 | None:intergenic | 20.0% |
| !! | TGTCTAATAAGTTCAAAATT+GGG | + | chr8.4:11958172-11958191 | None:intergenic | 20.0% |
| !! | TGTTCAAATATTCATTGAAT+TGG | - | chr8.4:11959296-11959315 | MS.gene78250:intron | 20.0% |
| !!! | ATCAATTTTAAACTTTATGC+AGG | - | chr8.4:11959172-11959191 | MS.gene78250:intron | 20.0% |
| !!! | CAGATTTGGTATAAATTTTA+TGG | - | chr8.4:11959261-11959280 | MS.gene78250:intron | 20.0% |
| ! | AAATTGGAAAAAGGATATGA+TGG | + | chr8.4:11958290-11958309 | None:intergenic | 25.0% |
| ! | AACTTAATAATTGTTAGGTG+AGG | - | chr8.4:11959005-11959024 | MS.gene78250:intron | 25.0% |
| ! | ATTAAACTTGTAATGAACAG+GGG | + | chr8.4:11958257-11958276 | None:intergenic | 25.0% |
| ! | GATTAAACTTGTAATGAACA+GGG | + | chr8.4:11958258-11958277 | None:intergenic | 25.0% |
| ! | GATTTCAAGCAAAGATTATT+TGG | - | chr8.4:11960279-11960298 | MS.gene78250:CDS | 25.0% |
| ! | GGATGATGTTATAAAAGTTA+TGG | - | chr8.4:11958462-11958481 | MS.gene78250:intron | 25.0% |
| ! | GTTGACCAAAAAAAATTAGA+AGG | + | chr8.4:11959749-11959768 | None:intergenic | 25.0% |
| !! | CGTGATTGATAATTACTTTA+CGG | - | chr8.4:11958111-11958130 | MS.gene78250:CDS | 25.0% |
| !! | CTTTCAATTTGTTTCAGATT+TGG | - | chr8.4:11959247-11959266 | MS.gene78250:intron | 25.0% |
| !! | GCTAGAATTTTTAACACATA+TGG | - | chr8.4:11959031-11959050 | MS.gene78250:intron | 25.0% |
| !! | GTGATTGATAATTACTTTAC+GGG | - | chr8.4:11958112-11958131 | MS.gene78250:CDS | 25.0% |
| !! | TATGCATGTAGTAATGATTT+TGG | - | chr8.4:11958949-11958968 | MS.gene78250:CDS | 25.0% |
| !!! | GTGTATTTTTCAACACTAAA+AGG | + | chr8.4:11959777-11959796 | None:intergenic | 25.0% |
| !!! | TTATTTTATTTGGATCCCTT+TGG | - | chr8.4:11958804-11958823 | MS.gene78250:CDS | 25.0% |
| AAATAGCTATTCCAATGAGA+AGG | + | chr8.4:11957829-11957848 | None:intergenic | 30.0% | |
| ACGATTGGGAATGTTTAATA+TGG | - | chr8.4:11959819-11959838 | MS.gene78250:CDS | 30.0% | |
| ATAGTGAAAAAATATGGCAG+AGG | + | chr8.4:11959118-11959137 | None:intergenic | 30.0% | |
| CAACCTTTAAATTTGCACTT+AGG | - | chr8.4:11959989-11960008 | MS.gene78250:CDS | 30.0% | |
| CATTGAATTGGAAACAGATT+AGG | - | chr8.4:11959308-11959327 | MS.gene78250:intron | 30.0% | |
| GAGAATGTTGTACATCATAT+TGG | - | chr8.4:11958142-11958161 | MS.gene78250:intron | 30.0% | |
| GGATTAAACTTGTAATGAAC+AGG | + | chr8.4:11958259-11958278 | None:intergenic | 30.0% | |
| GTAAGAAGTTGTTATGATGA+GGG | - | chr8.4:11958839-11958858 | MS.gene78250:intron | 30.0% | |
| GTGCCAAATTATTAGAATCA+AGG | + | chr8.4:11958546-11958565 | None:intergenic | 30.0% | |
| GTTTAATATGGATGATGAAG+TGG | - | chr8.4:11959831-11959850 | MS.gene78250:CDS | 30.0% | |
| TCTCCTAAGTGCAAATTTAA+AGG | + | chr8.4:11959995-11960014 | None:intergenic | 30.0% | |
| TGATCAACTTCAAGAAGAAT+AGG | + | chr8.4:11958208-11958227 | None:intergenic | 30.0% | |
| TGTAAGAAGTTGTTATGATG+AGG | - | chr8.4:11958838-11958857 | MS.gene78250:intron | 30.0% | |
| TTTCAGATTGATCTCTTGTT+TGG | + | chr8.4:11957724-11957743 | None:intergenic | 30.0% | |
| ! | AACTTTTATAACATCATCCG+TGG | + | chr8.4:11958461-11958480 | None:intergenic | 30.0% |
| ! | AAGCAAAGATTATTTGGTGA+CGG | - | chr8.4:11960285-11960304 | MS.gene78250:CDS | 30.0% |
| ! | ACTTTTATAACATCATCCGT+GGG | + | chr8.4:11958460-11958479 | None:intergenic | 30.0% |
| ! | CATGTAGTAATGATTTTGGA+TGG | - | chr8.4:11958953-11958972 | MS.gene78250:CDS | 30.0% |
| ! | TTGATAATTACTTTACGGGA+AGG | - | chr8.4:11958116-11958135 | MS.gene78250:CDS | 30.0% |
| AAACAGATTAGGTGTTTGAC+TGG | - | chr8.4:11959319-11959338 | MS.gene78250:CDS | 35.0% | |
| AAGAAAACGAAGAGTTCCAT+TGG | - | chr8.4:11957979-11957998 | MS.gene78250:intron | 35.0% | |
| ACTCTTTGCCTAATTTATGC+AGG | - | chr8.4:11960098-11960117 | MS.gene78250:CDS | 35.0% | |
| AGTGCACTATAGAAAACGAT+TGG | - | chr8.4:11959804-11959823 | MS.gene78250:CDS | 35.0% | |
| AGTTGATCAGATCTATCACT+TGG | - | chr8.4:11958219-11958238 | MS.gene78250:intron | 35.0% | |
| CTATTCCAATGAGAAGGAAA+GGG | + | chr8.4:11957823-11957842 | None:intergenic | 35.0% | |
| CTGAATTCTATCTTTGCGTT+GGG | + | chr8.4:11960144-11960163 | None:intergenic | 35.0% | |
| GACACTAAACATGTTAGGAT+TGG | - | chr8.4:11958583-11958602 | MS.gene78250:intron | 35.0% | |
| GATAGAATTCAGAGCAAACA+CGG | - | chr8.4:11960152-11960171 | MS.gene78250:CDS | 35.0% | |
| GGACACAATACTTACACTTT+CGG | + | chr8.4:11958439-11958458 | None:intergenic | 35.0% | |
| GTGCACTATAGAAAACGATT+GGG | - | chr8.4:11959805-11959824 | MS.gene78250:CDS | 35.0% | |
| TACACCTATACATCACCAAA+GGG | + | chr8.4:11958822-11958841 | None:intergenic | 35.0% | |
| TACATATGACAACAGGTAGA+GGG | - | chr8.4:11959854-11959873 | MS.gene78250:CDS | 35.0% | |
| TCTGAATTCTATCTTTGCGT+TGG | + | chr8.4:11960145-11960164 | None:intergenic | 35.0% | |
| TGAATTCTATCTTTGCGTTG+GGG | + | chr8.4:11960143-11960162 | None:intergenic | 35.0% | |
| TGTCAGACACATATACTTGT+CGG | + | chr8.4:11958384-11958403 | None:intergenic | 35.0% | |
| TTACACCTATACATCACCAA+AGG | + | chr8.4:11958823-11958842 | None:intergenic | 35.0% | |
| TTGAAATCAGCAACCATTAG+AGG | + | chr8.4:11960267-11960286 | None:intergenic | 35.0% | |
| TTGTACCACCTGCATAAATT+AGG | + | chr8.4:11960109-11960128 | None:intergenic | 35.0% | |
| ! | AGCAAAGATTATTTGGTGAC+GGG | - | chr8.4:11960286-11960305 | MS.gene78250:CDS | 35.0% |
| ! | CAAGAATGTGCATTGATGAT+GGG | - | chr8.4:11959056-11959075 | MS.gene78250:intron | 35.0% |
| ! | TAAACTTTATGCAGGCATTG+AGG | - | chr8.4:11959180-11959199 | MS.gene78250:intron | 35.0% |
| !! | TCTCTTGCTTTTCAATCCAA+CGG | + | chr8.4:11958005-11958024 | None:intergenic | 35.0% |
| AAGATGACTTCCAACGAAAC+CGG | + | chr8.4:11958056-11958075 | None:intergenic | 40.0% | |
| AATTTGGCACAAGACGAATG+TGG | - | chr8.4:11958556-11958575 | MS.gene78250:intron | 40.0% | |
| ACTAGTACAAGTGAGGTGTA+CGG | - | chr8.4:11958635-11958654 | MS.gene78250:intron | 40.0% | |
| AGCATGTTTGTTCTCGTTCT+TGG | + | chr8.4:11957788-11957807 | None:intergenic | 40.0% | |
| CCATCATCAATGCACATTCT+TGG | + | chr8.4:11959058-11959077 | None:intergenic | 40.0% | |
| CTTTGCCTAATTTATGCAGG+TGG | - | chr8.4:11960101-11960120 | MS.gene78250:CDS | 40.0% | |
| GAAGTGGTACATATGACAAC+AGG | - | chr8.4:11959847-11959866 | MS.gene78250:CDS | 40.0% | |
| GATGATGAATCGTGATGTTG+TGG | + | chr8.4:11957893-11957912 | None:intergenic | 40.0% | |
| GCTATTCCAATGAGAAGGAA+AGG | + | chr8.4:11957824-11957843 | None:intergenic | 40.0% | |
| GTACATATGACAACAGGTAG+AGG | - | chr8.4:11959853-11959872 | MS.gene78250:CDS | 40.0% | |
| GTGGATCGTTTGATTGAAAG+AGG | - | chr8.4:11958076-11958095 | MS.gene78250:CDS | 40.0% | |
| TCCAAAGCAAAAGAGCTTCT+TGG | - | chr8.4:11960207-11960226 | MS.gene78250:CDS | 40.0% | |
| TTTCGTTGGAAGTCATCTTG+TGG | - | chr8.4:11958057-11958076 | MS.gene78250:intron | 40.0% | |
| TTTGTTCTCGTTCTTGGAAG+AGG | + | chr8.4:11957782-11957801 | None:intergenic | 40.0% | |
| ! | AAAACGTGTTGCTGAGACTT+TGG | - | chr8.4:11958862-11958881 | MS.gene78250:intron | 40.0% |
| ! | AAGGATATGATGGTCTTGAC+AGG | + | chr8.4:11958280-11958299 | None:intergenic | 40.0% |
| ! | AAGGATCCATTGACTGTCTA+TGG | - | chr8.4:11959203-11959222 | MS.gene78250:intron | 40.0% |
| ! | ACGATGTGATGATGAATCTG+TGG | + | chr8.4:11957753-11957772 | None:intergenic | 40.0% |
| ! | AGTGTAAGTATTGTGTCCCA+CGG | - | chr8.4:11958441-11958460 | MS.gene78250:intron | 40.0% |
| ! | CCAAGAATGTGCATTGATGA+TGG | - | chr8.4:11959055-11959074 | MS.gene78250:intron | 40.0% |
| ! | TATGATCAAAAGCGCGTGTT+TGG | - | chr8.4:11958355-11958374 | MS.gene78250:intron | 40.0% |
| ! | TTAGGATTGGCAAAGAGAGT+GGG | - | chr8.4:11958596-11958615 | MS.gene78250:intron | 40.0% |
| ! | TTTGCTGACTAGTACAAGTG+AGG | - | chr8.4:11958628-11958647 | MS.gene78250:intron | 40.0% |
| !! | ATGTCTGGCTTTCTCTTATG+TGG | + | chr8.4:11960186-11960205 | None:intergenic | 40.0% |
| !! | GCAAAGATTATTTGGTGACG+GGG | - | chr8.4:11960287-11960306 | MS.gene78250:CDS | 40.0% |
| !!! | TCTTTTGCTTTGGAGATGTC+TGG | + | chr8.4:11960201-11960220 | None:intergenic | 40.0% |
| AAGCAAAAGAGCTTCTTGGC+TGG | - | chr8.4:11960211-11960230 | MS.gene78250:CDS | 45.0% | |
| AGAATTCAGAGCAAACACGG+AGG | - | chr8.4:11960155-11960174 | MS.gene78250:CDS | 45.0% | |
| ATCCTCAAGCTGAGACTTAC+TGG | - | chr8.4:11958672-11958691 | MS.gene78250:intron | 45.0% | |
| ATCGTGATGTTGTGGAAGAG+TGG | + | chr8.4:11957885-11957904 | None:intergenic | 45.0% | |
| CATGTTGGGCCTTTCAATCT+TGG | - | chr8.4:11959902-11959921 | MS.gene78250:CDS | 45.0% | |
| CCAGGATTGCCAAGATTGAA+AGG | + | chr8.4:11959914-11959933 | None:intergenic | 45.0% | |
| CCATCAGATTCAGAGTCAAC+TGG | + | chr8.4:11959395-11959414 | None:intergenic | 45.0% | |
| CCTTTCAATCTTGGCAATCC+TGG | - | chr8.4:11959911-11959930 | MS.gene78250:CDS | 45.0% | |
| GTGGGGACACTAAACATGTT+AGG | - | chr8.4:11958578-11958597 | MS.gene78250:intron | 45.0% | |
| TACCTGAGCAAGTTCAAGCA+TGG | + | chr8.4:11959945-11959964 | None:intergenic | 45.0% | |
| TCAAGCATGGTGAATTCACC+AGG | + | chr8.4:11959932-11959951 | None:intergenic | 45.0% | |
| TCAGCTTGAGGATGTTGAAG+TGG | + | chr8.4:11958665-11958684 | None:intergenic | 45.0% | |
| TCCTCAAGCTGAGACTTACT+GGG | - | chr8.4:11958673-11958692 | MS.gene78250:intron | 45.0% | |
| TGATGGAAGGCGAACATGTT+GGG | - | chr8.4:11959888-11959907 | MS.gene78250:CDS | 45.0% | |
| TGTAATGAACAGGGGAAGCA+GGG | + | chr8.4:11958249-11958268 | None:intergenic | 45.0% | |
| TGTTGCTGAGACTTTGGCTA+TGG | - | chr8.4:11958868-11958887 | MS.gene78250:intron | 45.0% | |
| TTGTAATGAACAGGGGAAGC+AGG | + | chr8.4:11958250-11958269 | None:intergenic | 45.0% | |
| ! | CAAGAGACAGAAGAGAGTAC+TGG | - | chr8.4:11958018-11958037 | MS.gene78250:intron | 45.0% |
| ! | CATTGACTGTCTATGGCGAT+GGG | - | chr8.4:11959210-11959229 | MS.gene78250:intron | 45.0% |
| ! | CCAGTTGACTCTGAATCTGA+TGG | - | chr8.4:11959392-11959411 | MS.gene78250:CDS | 45.0% |
| ! | CTTTTCAATCCAACGGCCAA+TGG | + | chr8.4:11957998-11958017 | None:intergenic | 45.0% |
| ! | GCCAAGAAGCTCTTTTGCTT+TGG | + | chr8.4:11960211-11960230 | None:intergenic | 45.0% |
| ! | GTTAGGATTGGCAAAGAGAG+TGG | - | chr8.4:11958595-11958614 | MS.gene78250:intron | 45.0% |
| ! | TTGGCTATGGATTACCACAG+AGG | - | chr8.4:11958881-11958900 | MS.gene78250:intron | 45.0% |
| !! | CAGAAGAGAGTACTGGTTAC+CGG | - | chr8.4:11958025-11958044 | MS.gene78250:intron | 45.0% |
| !! | CTTTATGCAGGCATTGAGGA+AGG | - | chr8.4:11959184-11959203 | MS.gene78250:intron | 45.0% |
| !! | GAGATAGTGGAAGAAGAGAG+TGG | + | chr8.4:11957852-11957871 | None:intergenic | 45.0% |
| !! | GGATCCCTTTGGTGATGTAT+AGG | - | chr8.4:11958815-11958834 | MS.gene78250:intron | 45.0% |
| !! | TTATTTGGTGACGGGGACAA+AGG | - | chr8.4:11960294-11960313 | MS.gene78250:CDS | 45.0% |
| AACAGGTAGAGGGCTTGATG+AGG | - | chr8.4:11959864-11959883 | MS.gene78250:CDS | 50.0% | |
| CCATCGCCATAGACAGTCAA+TGG | + | chr8.4:11959212-11959231 | None:intergenic | 50.0% | |
| CCATTAGAGGAAGTCCCTCA+CGG | + | chr8.4:11960254-11960273 | None:intergenic | 50.0% | |
| CCGAGTCGGAAGAGTTAACT+CGG | + | chr8.4:11957927-11957946 | None:intergenic | 50.0% | |
| CCGAGTTAACTCTTCCGACT+CGG | - | chr8.4:11957924-11957943 | MS.gene78250:intron | 50.0% | |
| CCTCAAGCTGAGACTTACTG+GGG | - | chr8.4:11958674-11958693 | MS.gene78250:intron | 50.0% | |
| CGAGTCCCTTTCCTTCTCAT+TGG | - | chr8.4:11957815-11957834 | MS.gene78250:CDS | 50.0% | |
| CGGGTTCTGTTAGAGGAACA+CGG | - | chr8.4:11957947-11957966 | MS.gene78250:intron | 50.0% | |
| CTCAAGCTGAGACTTACTGG+GGG | - | chr8.4:11958675-11958694 | MS.gene78250:intron | 50.0% | |
| CTGATGGAAGGCGAACATGT+TGG | - | chr8.4:11959887-11959906 | MS.gene78250:CDS | 50.0% | |
| GGTCAGTAACTTCGTTGCTC+AGG | - | chr8.4:11959084-11959103 | MS.gene78250:intron | 50.0% | |
| GTGGAAGAGTGGATCGAGAA+GGG | + | chr8.4:11957874-11957893 | None:intergenic | 50.0% | |
| TGGATCGAGAAGGGAGATAG+TGG | + | chr8.4:11957865-11957884 | None:intergenic | 50.0% | |
| TGGCACAAGACGAATGTGGT+GGG | - | chr8.4:11958560-11958579 | MS.gene78250:intron | 50.0% | |
| TGGGGGAATGTTAACCCCAT+TGG | - | chr8.4:11958692-11958711 | MS.gene78250:intron | 50.0% | |
| TGTGGAAGAGTGGATCGAGA+AGG | + | chr8.4:11957875-11957894 | None:intergenic | 50.0% | |
| TTGGCACAAGACGAATGTGG+TGG | - | chr8.4:11958559-11958578 | MS.gene78250:intron | 50.0% | |
| ! | ATGGATTACCACAGAGGAGC+TGG | - | chr8.4:11958887-11958906 | MS.gene78250:intron | 50.0% |
| ! | CACCATGCTTGAACTTGCTC+AGG | - | chr8.4:11959940-11959959 | MS.gene78250:CDS | 50.0% |
| ! | CCATTGACTGTCTATGGCGA+TGG | - | chr8.4:11959209-11959228 | MS.gene78250:intron | 50.0% |
| ! | GAGCTGGCATTGAGGTTTGT+TGG | - | chr8.4:11958903-11958922 | MS.gene78250:intron | 50.0% |
| !! | AAGAGAGTACTGGTTACCGG+TGG | - | chr8.4:11958028-11958047 | MS.gene78250:intron | 50.0% |
| !! | AGTTAACTCTTCCGACTCGG+CGG | - | chr8.4:11957927-11957946 | MS.gene78250:intron | 50.0% |
| AGAGGGCTTGATGAGGCTGA+TGG | - | chr8.4:11959871-11959890 | MS.gene78250:CDS | 55.0% | |
| CCCCAGTAAGTCTCAGCTTG+AGG | + | chr8.4:11958677-11958696 | None:intergenic | 55.0% | |
| CCGTGAGGGACTTCCTCTAA+TGG | - | chr8.4:11960251-11960270 | MS.gene78250:CDS | 55.0% | |
| CGAAGAGTTCCATTGGCCGT+TGG | - | chr8.4:11957986-11958005 | MS.gene78250:intron | 55.0% | |
| GGCACAAGACGAATGTGGTG+GGG | - | chr8.4:11958561-11958580 | MS.gene78250:intron | 55.0% | |
| GGCTTGATGAGGCTGATGGA+AGG | - | chr8.4:11959875-11959894 | MS.gene78250:CDS | 55.0% | |
| TAGAGGAAGTCCCTCACGGA+GGG | + | chr8.4:11960250-11960269 | None:intergenic | 55.0% | |
| TCTAACAGAACCCGCCGAGT+CGG | + | chr8.4:11957941-11957960 | None:intergenic | 55.0% | |
| TTAGAGGAAGTCCCTCACGG+AGG | + | chr8.4:11960251-11960270 | None:intergenic | 55.0% | |
| !! | GTGCATTGATGATGGGCGTG+TGG | - | chr8.4:11959063-11959082 | MS.gene78250:intron | 55.0% |
| !! | GTTAACTCTTCCGACTCGGC+GGG | - | chr8.4:11957928-11957947 | MS.gene78250:intron | 55.0% |
| ACCATCTGTGTCCCTCCGTG+AGG | - | chr8.4:11960236-11960255 | MS.gene78250:CDS | 60.0% | |
| CCACAGAGGAGCTGGCATTG+AGG | - | chr8.4:11958895-11958914 | MS.gene78250:intron | 60.0% | |
| CCATCTGTGTCCCTCCGTGA+GGG | - | chr8.4:11960237-11960256 | MS.gene78250:CDS | 60.0% | |
| CCTCAATGCCAGCTCCTCTG+TGG | + | chr8.4:11958898-11958917 | None:intergenic | 60.0% | |
| ! | GACTCGGCGGGTTCTGTTAG+AGG | - | chr8.4:11957940-11957959 | MS.gene78250:intron | 60.0% |
| ! | TCCAACGAAACCGGCTCCAC+CGG | + | chr8.4:11958047-11958066 | None:intergenic | 60.0% |
| !! | GTACTGGTTACCGGTGGAGC+CGG | - | chr8.4:11958034-11958053 | MS.gene78250:intron | 60.0% |
| CCCTCACGGAGGGACACAGA+TGG | + | chr8.4:11960240-11960259 | None:intergenic | 65.0% | |
| ! | ACCGGTGGAGCCGGTTTCGT+TGG | - | chr8.4:11958043-11958062 | MS.gene78250:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 11957695 | 11960332 | 11957695 | ID=MS.gene78250 |
| chr8.4 | mRNA | 11957695 | 11960332 | 11957695 | ID=MS.gene78250.t1;Parent=MS.gene78250 |
| chr8.4 | exon | 11959748 | 11960332 | 11959748 | ID=MS.gene78250.t1.exon1;Parent=MS.gene78250.t1 |
| chr8.4 | CDS | 11959748 | 11960332 | 11959748 | ID=cds.MS.gene78250.t1;Parent=MS.gene78250.t1 |
| chr8.4 | exon | 11959314 | 11959458 | 11959314 | ID=MS.gene78250.t1.exon2;Parent=MS.gene78250.t1 |
| chr8.4 | CDS | 11959314 | 11959458 | 11959314 | ID=cds.MS.gene78250.t1;Parent=MS.gene78250.t1 |
| chr8.4 | exon | 11959111 | 11959190 | 11959111 | ID=MS.gene78250.t1.exon3;Parent=MS.gene78250.t1 |
| chr8.4 | CDS | 11959111 | 11959190 | 11959111 | ID=cds.MS.gene78250.t1;Parent=MS.gene78250.t1 |
| chr8.4 | exon | 11958922 | 11959005 | 11958922 | ID=MS.gene78250.t1.exon4;Parent=MS.gene78250.t1 |
| chr8.4 | CDS | 11958922 | 11959005 | 11958922 | ID=cds.MS.gene78250.t1;Parent=MS.gene78250.t1 |
| chr8.4 | exon | 11958759 | 11958833 | 11958759 | ID=MS.gene78250.t1.exon5;Parent=MS.gene78250.t1 |
| chr8.4 | CDS | 11958759 | 11958833 | 11958759 | ID=cds.MS.gene78250.t1;Parent=MS.gene78250.t1 |
| chr8.4 | exon | 11958066 | 11958158 | 11958066 | ID=MS.gene78250.t1.exon6;Parent=MS.gene78250.t1 |
| chr8.4 | CDS | 11958066 | 11958158 | 11958066 | ID=cds.MS.gene78250.t1;Parent=MS.gene78250.t1 |
| chr8.4 | exon | 11957695 | 11957907 | 11957695 | ID=MS.gene78250.t1.exon7;Parent=MS.gene78250.t1 |
| chr8.4 | CDS | 11957695 | 11957907 | 11957695 | ID=cds.MS.gene78250.t1;Parent=MS.gene78250.t1 |
| Gene Sequence |
| Protein sequence |
