Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene80841.t1 | XP_003620478.1 | 96.1 | 646 | 23 | 2 | 21 | 666 | 142 | 785 | 0.00E+00 | 1206.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene80841.t1 | A7XN92 | 46.4 | 588 | 299 | 6 | 81 | 658 | 156 | 737 | 3.4e-134 | 480.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene80841.t1 | G7KN37 | 96.1 | 646 | 23 | 2 | 21 | 666 | 142 | 785 | 0.0e+00 | 1206.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049351 | MS.gene80841 | 0.867498 | 1.31E-65 | -1.69E-46 |
MS.gene049427 | MS.gene80841 | 0.856805 | 2.51E-62 | -1.69E-46 |
MS.gene049491 | MS.gene80841 | 0.841938 | 3.51E-58 | -1.69E-46 |
MS.gene049614 | MS.gene80841 | 0.827993 | 1.15E-54 | -1.69E-46 |
MS.gene049661 | MS.gene80841 | 0.863554 | 2.29E-64 | -1.69E-46 |
MS.gene049662 | MS.gene80841 | 0.854824 | 9.51E-62 | -1.69E-46 |
MS.gene049758 | MS.gene80841 | 0.825405 | 4.77E-54 | -1.69E-46 |
MS.gene050076 | MS.gene80841 | 0.86048 | 2.01E-63 | -1.69E-46 |
MS.gene050099 | MS.gene80841 | 0.846465 | 2.14E-59 | -1.69E-46 |
MS.gene050301 | MS.gene80841 | 0.902484 | 9.25E-79 | -1.69E-46 |
MS.gene050397 | MS.gene80841 | 0.809524 | 1.81E-50 | -1.69E-46 |
MS.gene050406 | MS.gene80841 | 0.802366 | 5.80E-49 | -1.69E-46 |
MS.gene050432 | MS.gene80841 | 0.83714 | 6.20E-57 | -1.69E-46 |
MS.gene050529 | MS.gene80841 | 0.813022 | 3.16E-51 | -1.69E-46 |
MS.gene050558 | MS.gene80841 | 0.803809 | 2.92E-49 | -1.69E-46 |
MS.gene050767 | MS.gene80841 | 0.845156 | 4.84E-59 | -1.69E-46 |
MS.gene050770 | MS.gene80841 | 0.848398 | 6.29E-60 | -1.69E-46 |
MS.gene050783 | MS.gene80841 | 0.843773 | 1.14E-58 | -1.69E-46 |
MS.gene050812 | MS.gene80841 | 0.83858 | 2.64E-57 | -1.69E-46 |
MS.gene05101 | MS.gene80841 | 0.898167 | 6.91E-77 | -1.69E-46 |
MS.gene051471 | MS.gene80841 | 0.896417 | 3.76E-76 | -1.69E-46 |
MS.gene051662 | MS.gene80841 | 0.816964 | 4.21E-52 | -1.69E-46 |
MS.gene051663 | MS.gene80841 | 0.840688 | 7.48E-58 | -1.69E-46 |
MS.gene051877 | MS.gene80841 | 0.811084 | 8.36E-51 | -1.69E-46 |
MS.gene052078 | MS.gene80841 | 0.87356 | 1.34E-67 | -1.69E-46 |
MS.gene052178 | MS.gene80841 | 0.820817 | 5.61E-53 | -1.69E-46 |
MS.gene052188 | MS.gene80841 | 0.848649 | 5.36E-60 | -1.69E-46 |
MS.gene052207 | MS.gene80841 | 0.816569 | 5.17E-52 | -1.69E-46 |
MS.gene052253 | MS.gene80841 | 0.831283 | 1.82E-55 | -1.69E-46 |
MS.gene052287 | MS.gene80841 | 0.805996 | 1.02E-49 | -1.69E-46 |
MS.gene052290 | MS.gene80841 | 0.819854 | 9.33E-53 | -1.69E-46 |
MS.gene052310 | MS.gene80841 | 0.863381 | 2.59E-64 | -1.69E-46 |
MS.gene052322 | MS.gene80841 | 0.815156 | 1.07E-51 | -1.69E-46 |
MS.gene052326 | MS.gene80841 | 0.892526 | 1.46E-74 | -1.69E-46 |
MS.gene052340 | MS.gene80841 | 0.823316 | 1.48E-53 | -1.69E-46 |
MS.gene052485 | MS.gene80841 | 0.820937 | 5.27E-53 | -1.69E-46 |
MS.gene053322 | MS.gene80841 | 0.840572 | 8.02E-58 | -1.69E-46 |
MS.gene053557 | MS.gene80841 | 0.817339 | 3.47E-52 | -1.69E-46 |
MS.gene053836 | MS.gene80841 | 0.860692 | 1.73E-63 | -1.69E-46 |
MS.gene054123 | MS.gene80841 | 0.882616 | 8.97E-71 | -1.69E-46 |
MS.gene054376 | MS.gene80841 | 0.855894 | 4.64E-62 | -1.69E-46 |
MS.gene054473 | MS.gene80841 | 0.807982 | 3.87E-50 | -1.69E-46 |
MS.gene05455 | MS.gene80841 | 0.895922 | 6.04E-76 | -1.69E-46 |
MS.gene054802 | MS.gene80841 | 0.874186 | 8.22E-68 | -1.69E-46 |
MS.gene054803 | MS.gene80841 | 0.874004 | 9.48E-68 | -1.69E-46 |
MS.gene054804 | MS.gene80841 | 0.875535 | 2.85E-68 | -1.69E-46 |
MS.gene054955 | MS.gene80841 | 0.801813 | 7.54E-49 | -1.69E-46 |
MS.gene055116 | MS.gene80841 | 0.823625 | 1.25E-53 | -1.69E-46 |
MS.gene055254 | MS.gene80841 | 0.814626 | 1.40E-51 | -1.69E-46 |
MS.gene055277 | MS.gene80841 | 0.871992 | 4.48E-67 | -1.69E-46 |
MS.gene055390 | MS.gene80841 | 0.893486 | 6.01E-75 | -1.69E-46 |
MS.gene055397 | MS.gene80841 | 0.851305 | 9.68E-61 | -1.69E-46 |
MS.gene055412 | MS.gene80841 | 0.835014 | 2.15E-56 | -1.69E-46 |
MS.gene055422 | MS.gene80841 | 0.893334 | 6.92E-75 | -1.69E-46 |
MS.gene055428 | MS.gene80841 | 0.87996 | 8.13E-70 | -1.69E-46 |
MS.gene055499 | MS.gene80841 | 0.839679 | 1.37E-57 | -1.69E-46 |
MS.gene055604 | MS.gene80841 | 0.810711 | 1.01E-50 | -1.69E-46 |
MS.gene055896 | MS.gene80841 | 0.85554 | 5.89E-62 | -1.69E-46 |
MS.gene056191 | MS.gene80841 | 0.826198 | 3.09E-54 | -1.69E-46 |
MS.gene056407 | MS.gene80841 | 0.818507 | 1.89E-52 | -1.69E-46 |
MS.gene056452 | MS.gene80841 | 0.834428 | 3.01E-56 | -1.69E-46 |
MS.gene056609 | MS.gene80841 | 0.8372 | 5.98E-57 | -1.69E-46 |
MS.gene056612 | MS.gene80841 | 0.857703 | 1.36E-62 | -1.69E-46 |
MS.gene056796 | MS.gene80841 | 0.808167 | 3.54E-50 | -1.69E-46 |
MS.gene056931 | MS.gene80841 | 0.812488 | 4.13E-51 | -1.69E-46 |
MS.gene056933 | MS.gene80841 | 0.813155 | 2.95E-51 | -1.69E-46 |
MS.gene056935 | MS.gene80841 | 0.803634 | 3.17E-49 | -1.69E-46 |
MS.gene057011 | MS.gene80841 | 0.822014 | 2.97E-53 | -1.69E-46 |
MS.gene05702 | MS.gene80841 | 0.845888 | 3.07E-59 | -1.69E-46 |
MS.gene057121 | MS.gene80841 | 0.871296 | 7.61E-67 | -1.69E-46 |
MS.gene057123 | MS.gene80841 | 0.823562 | 1.30E-53 | -1.69E-46 |
MS.gene057129 | MS.gene80841 | 0.815199 | 1.04E-51 | -1.69E-46 |
MS.gene057146 | MS.gene80841 | 0.824738 | 6.86E-54 | -1.69E-46 |
MS.gene057245 | MS.gene80841 | 0.855299 | 6.92E-62 | -1.69E-46 |
MS.gene057295 | MS.gene80841 | 0.834441 | 2.99E-56 | -1.69E-46 |
MS.gene05733 | MS.gene80841 | 0.848146 | 7.38E-60 | -1.69E-46 |
MS.gene057439 | MS.gene80841 | 0.831606 | 1.52E-55 | -1.69E-46 |
MS.gene057448 | MS.gene80841 | 0.800984 | 1.12E-48 | -1.69E-46 |
MS.gene057450 | MS.gene80841 | 0.80476 | 1.85E-49 | -1.69E-46 |
MS.gene057749 | MS.gene80841 | 0.810133 | 1.34E-50 | -1.69E-46 |
MS.gene057823 | MS.gene80841 | 0.803832 | 2.89E-49 | -1.69E-46 |
MS.gene058002 | MS.gene80841 | 0.888443 | 5.88E-73 | -1.69E-46 |
MS.gene058082 | MS.gene80841 | 0.801273 | 9.73E-49 | -1.69E-46 |
MS.gene05811 | MS.gene80841 | 0.856338 | 3.44E-62 | -1.69E-46 |
MS.gene058142 | MS.gene80841 | 0.821818 | 3.30E-53 | -1.69E-46 |
MS.gene058233 | MS.gene80841 | 0.832901 | 7.26E-56 | -1.69E-46 |
MS.gene058276 | MS.gene80841 | 0.810372 | 1.19E-50 | -1.69E-46 |
MS.gene058293 | MS.gene80841 | 0.850558 | 1.57E-60 | -1.69E-46 |
MS.gene058365 | MS.gene80841 | 0.816447 | 5.51E-52 | -1.69E-46 |
MS.gene058660 | MS.gene80841 | 0.916921 | 9.94E-86 | -1.69E-46 |
MS.gene05886 | MS.gene80841 | 0.813395 | 2.62E-51 | -1.69E-46 |
MS.gene058928 | MS.gene80841 | 0.825186 | 5.38E-54 | -1.69E-46 |
MS.gene058993 | MS.gene80841 | 0.828473 | 8.82E-55 | -1.69E-46 |
MS.gene05907 | MS.gene80841 | 0.859593 | 3.71E-63 | -1.69E-46 |
MS.gene059141 | MS.gene80841 | 0.802455 | 5.56E-49 | -1.69E-46 |
MS.gene059342 | MS.gene80841 | 0.813997 | 1.93E-51 | -1.69E-46 |
MS.gene059518 | MS.gene80841 | 0.842278 | 2.85E-58 | -1.69E-46 |
MS.gene059536 | MS.gene80841 | 0.826652 | 2.41E-54 | -1.69E-46 |
MS.gene059597 | MS.gene80841 | 0.881535 | 2.21E-70 | -1.69E-46 |
MS.gene059676 | MS.gene80841 | 0.826464 | 2.67E-54 | -1.69E-46 |
MS.gene059688 | MS.gene80841 | 0.85455 | 1.14E-61 | -1.69E-46 |
MS.gene059692 | MS.gene80841 | 0.855275 | 7.04E-62 | -1.69E-46 |
MS.gene059695 | MS.gene80841 | 0.860796 | 1.61E-63 | -1.69E-46 |
MS.gene059708 | MS.gene80841 | 0.820983 | 5.14E-53 | -1.69E-46 |
MS.gene05984 | MS.gene80841 | 0.839494 | 1.53E-57 | -1.69E-46 |
MS.gene059894 | MS.gene80841 | 0.848403 | 6.27E-60 | -1.69E-46 |
MS.gene059960 | MS.gene80841 | 0.850948 | 1.22E-60 | -1.69E-46 |
MS.gene060005 | MS.gene80841 | 0.802885 | 4.54E-49 | -1.69E-46 |
MS.gene06037 | MS.gene80841 | 0.842515 | 2.47E-58 | -1.69E-46 |
MS.gene060407 | MS.gene80841 | 0.839346 | 1.67E-57 | -1.69E-46 |
MS.gene060559 | MS.gene80841 | 0.8159 | 7.30E-52 | -1.69E-46 |
MS.gene06090 | MS.gene80841 | 0.820345 | 7.21E-53 | -1.69E-46 |
MS.gene061049 | MS.gene80841 | 0.851721 | 7.38E-61 | -1.69E-46 |
MS.gene061051 | MS.gene80841 | -0.819281 | 1.26E-52 | -1.69E-46 |
MS.gene061200 | MS.gene80841 | 0.846366 | 2.27E-59 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene80841.t1 | MTR_6g084410 | 96.130 | 646 | 23 | 2 | 21 | 666 | 142 | 785 | 0.0 | 1272 |
MS.gene80841.t1 | MTR_8g104340 | 61.121 | 535 | 168 | 4 | 92 | 622 | 105 | 603 | 0.0 | 653 |
MS.gene80841.t1 | MTR_8g104340 | 58.525 | 434 | 140 | 4 | 92 | 521 | 105 | 502 | 1.31e-171 | 500 |
MS.gene80841.t1 | MTR_1g475240 | 46.127 | 581 | 295 | 6 | 75 | 641 | 193 | 769 | 1.86e-168 | 503 |
MS.gene80841.t1 | MTR_1g075190 | 46.127 | 581 | 295 | 6 | 75 | 641 | 193 | 769 | 1.86e-168 | 503 |
MS.gene80841.t1 | MTR_4g126140 | 48.161 | 571 | 268 | 6 | 88 | 641 | 170 | 729 | 1.02e-161 | 483 |
MS.gene80841.t1 | MTR_8g104340 | 57.330 | 382 | 127 | 3 | 92 | 473 | 105 | 450 | 1.85e-148 | 439 |
MS.gene80841.t1 | MTR_6g008410 | 43.229 | 576 | 284 | 8 | 86 | 641 | 144 | 696 | 1.03e-143 | 445 |
MS.gene80841.t1 | MTR_2g100660 | 40.620 | 613 | 324 | 5 | 53 | 641 | 140 | 736 | 3.66e-135 | 416 |
MS.gene80841.t1 | MTR_8g066010 | 37.922 | 385 | 209 | 7 | 105 | 475 | 2 | 370 | 9.76e-68 | 226 |
MS.gene80841.t1 | MTR_1g050760 | 36.111 | 180 | 109 | 3 | 464 | 641 | 6 | 181 | 1.37e-20 | 94.0 |
MS.gene80841.t1 | MTR_4g067300 | 36.601 | 153 | 94 | 1 | 494 | 646 | 165 | 314 | 2.50e-20 | 94.7 |
MS.gene80841.t1 | MTR_1g050760 | 36.111 | 180 | 109 | 3 | 464 | 641 | 121 | 296 | 4.03e-20 | 94.0 |
MS.gene80841.t1 | MTR_4g120880 | 35.802 | 162 | 92 | 4 | 482 | 641 | 178 | 329 | 1.56e-18 | 88.2 |
MS.gene80841.t1 | MTR_4g120880 | 37.121 | 132 | 78 | 2 | 482 | 611 | 178 | 306 | 1.55e-16 | 81.6 |
MS.gene80841.t1 | MTR_6g004480 | 34.500 | 200 | 120 | 4 | 444 | 637 | 90 | 284 | 5.87e-16 | 82.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene80841.t1 | AT3G18390 | 65.877 | 633 | 210 | 3 | 21 | 649 | 170 | 800 | 0.0 | 855 |
MS.gene80841.t1 | AT4G29750 | 42.905 | 599 | 314 | 9 | 55 | 638 | 198 | 783 | 7.92e-152 | 460 |
MS.gene80841.t1 | AT4G29750 | 42.905 | 599 | 314 | 9 | 55 | 638 | 198 | 783 | 1.19e-151 | 460 |
MS.gene80841.t1 | AT4G14510 | 41.538 | 650 | 295 | 13 | 48 | 641 | 184 | 804 | 1.58e-151 | 462 |
MS.gene80841.t1 | AT3G23070 | 42.289 | 603 | 318 | 7 | 54 | 641 | 190 | 777 | 2.47e-148 | 453 |
MS.gene80841.t1 | AT3G01370 | 41.971 | 629 | 316 | 11 | 55 | 663 | 144 | 743 | 8.53e-146 | 450 |
MS.gene80841.t1 | AT5G16180 | 43.049 | 597 | 268 | 9 | 53 | 641 | 180 | 712 | 3.08e-134 | 411 |
MS.gene80841.t1 | AT5G16180 | 41.121 | 428 | 181 | 8 | 53 | 473 | 180 | 543 | 3.74e-84 | 275 |
MS.gene80841.t1 | AT4G13070 | 36.207 | 174 | 90 | 6 | 464 | 630 | 145 | 304 | 1.16e-20 | 94.4 |
MS.gene80841.t1 | AT2G28480 | 32.524 | 206 | 121 | 4 | 448 | 646 | 111 | 305 | 2.87e-20 | 93.6 |
MS.gene80841.t1 | AT3G25440 | 32.812 | 192 | 117 | 4 | 474 | 657 | 79 | 266 | 1.76e-19 | 91.3 |
MS.gene80841.t1 | AT3G25440 | 32.812 | 192 | 117 | 4 | 474 | 657 | 143 | 330 | 2.54e-19 | 91.7 |
MS.gene80841.t1 | AT3G25440 | 34.356 | 163 | 101 | 3 | 497 | 657 | 17 | 175 | 5.75e-19 | 88.2 |
MS.gene80841.t1 | AT3G25440 | 34.356 | 163 | 101 | 3 | 497 | 657 | 17 | 175 | 5.75e-19 | 88.2 |
MS.gene80841.t1 | AT3G25440 | 34.356 | 163 | 101 | 3 | 497 | 657 | 17 | 175 | 5.75e-19 | 88.2 |
MS.gene80841.t1 | AT3G27550 | 34.270 | 178 | 104 | 5 | 476 | 647 | 116 | 286 | 9.77e-16 | 81.3 |
MS.gene80841.t1 | AT3G27550 | 34.270 | 178 | 104 | 5 | 476 | 647 | 60 | 230 | 1.41e-15 | 80.5 |
MS.gene80841.t1 | AT3G27550 | 34.270 | 178 | 104 | 5 | 476 | 647 | 60 | 230 | 1.41e-15 | 80.5 |
Find 167 sgRNAs with CRISPR-Local
Find 325 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACCATGGATGATTCTATTT+TGG | 0.161560 | 6.2:-82850617 | None:intergenic |
GTGAATTGTTGAAGGTAAAA+TGG | 0.174924 | 6.2:+82847316 | MS.gene80841:CDS |
TTTGACAAGCTTAACATTCT+TGG | 0.217554 | 6.2:-82850400 | None:intergenic |
TTCTTGTTTCATTTGTTCTA+TGG | 0.226531 | 6.2:-82851229 | None:intergenic |
TTGTTTCCAATTCTGTAATA+TGG | 0.240309 | 6.2:-82851206 | None:intergenic |
GCCTTTGTTAGAAGGTTTCT+AGG | 0.255818 | 6.2:-82851045 | None:intergenic |
AACAGGTGTGGCTGCAGTTT+TGG | 0.268681 | 6.2:+82850176 | MS.gene80841:CDS |
TTAGTTTATTGTTAGTGTTC+TGG | 0.273787 | 6.2:-82849913 | None:intergenic |
CTTCATCTGTGATTGTTTCC+TGG | 0.275888 | 6.2:-82850660 | None:intergenic |
AATGCGCTGCTTGATGATTT+AGG | 0.275993 | 6.2:+82849532 | MS.gene80841:CDS |
TCATGAGAGCTGGAGGAAAA+AGG | 0.313386 | 6.2:+82847614 | MS.gene80841:CDS |
TAGTGGTGGTGGTGGAATTA+AGG | 0.319313 | 6.2:+82847434 | MS.gene80841:CDS |
CTGGTTACAAAACACCTTAT+AGG | 0.323685 | 6.2:+82849626 | MS.gene80841:CDS |
ATGCCTTTGCCTTTGTTAGA+AGG | 0.328786 | 6.2:-82851053 | None:intergenic |
TCTTGTGTCAATCCAGCTTT+AGG | 0.331482 | 6.2:-82847576 | None:intergenic |
TGAAGACACAGCTAGGTTAC+TGG | 0.333987 | 6.2:+82850918 | MS.gene80841:CDS |
CATGTGCTATTCTTAAGCTT+TGG | 0.334419 | 6.2:+82849849 | MS.gene80841:CDS |
ATGTGCTATTCTTAAGCTTT+GGG | 0.337709 | 6.2:+82849850 | MS.gene80841:CDS |
GTTATGGTGCAGACATTAAC+AGG | 0.341222 | 6.2:+82850090 | MS.gene80841:intron |
CTATGAGGCCCAAGCTCGTT+GGG | 0.353341 | 6.2:+82850323 | MS.gene80841:CDS |
TTACTTCCCCGTGAAGTTCC+TGG | 0.365954 | 6.2:+82849607 | MS.gene80841:CDS |
ATTGTTAGTGTTCTGGATAC+CGG | 0.367898 | 6.2:-82849906 | None:intergenic |
TCCTTTACATTGAGTTCCTC+CGG | 0.369035 | 6.2:-82849361 | None:intergenic |
CTCTCTTCCTCTCTCTTCCA+TGG | 0.372454 | 6.2:-82847393 | None:intergenic |
ATTGTTTCCTGGTCATAATC+AGG | 0.375567 | 6.2:-82850649 | None:intergenic |
TGAATTGTTGAAGGTAAAAT+GGG | 0.375912 | 6.2:+82847317 | MS.gene80841:CDS |
CCTTCATTCTTAAACCAATC+TGG | 0.383986 | 6.2:-82850699 | None:intergenic |
AAGCTTAACATTCTTGGCTT+TGG | 0.389419 | 6.2:-82850394 | None:intergenic |
TTACTAATTTAACAAGTTCT+CGG | 0.390308 | 6.2:-82850870 | None:intergenic |
AGGGTATGCATTTGAGAGAG+AGG | 0.401836 | 6.2:+82847544 | MS.gene80841:CDS |
CTTCATGCTCCAGTCATCTT+CGG | 0.407149 | 6.2:-82851519 | None:intergenic |
TGTCCCTTCCCCAACGAGCT+TGG | 0.409814 | 6.2:-82850332 | None:intergenic |
GGGATGCGTTCTCGACTAAC+AGG | 0.414380 | 6.2:+82849661 | MS.gene80841:CDS |
GATTTAGGTCCTCGATTTGT+TGG | 0.414552 | 6.2:+82849547 | MS.gene80841:CDS |
GTCCCTTCCCCAACGAGCTT+GGG | 0.418594 | 6.2:-82850331 | None:intergenic |
GAGTAACCATATTACAGAAT+TGG | 0.420282 | 6.2:+82851200 | MS.gene80841:CDS |
TCCTCGATTTGTTGGATGGT+GGG | 0.423509 | 6.2:+82849555 | MS.gene80841:CDS |
TTCGTTCCGGATGTCTCATC+GGG | 0.425528 | 6.2:+82849397 | MS.gene80841:CDS |
TGCTCTATGCAATTTGTTCG+CGG | 0.426028 | 6.2:-82850581 | None:intergenic |
ACAAGCGGCCACTTACTCTA+AGG | 0.428042 | 6.2:+82851022 | MS.gene80841:CDS |
TTGAAAATAGTGAGCAAGTT+GGG | 0.433034 | 6.2:+82849461 | MS.gene80841:CDS |
TGTAGTGTGCAGCGCCGAAC+AGG | 0.433452 | 6.2:+82849265 | MS.gene80841:intron |
GGGAAGGACTTTGTTCCAAC+AGG | 0.437012 | 6.2:+82850159 | MS.gene80841:CDS |
ACCTTATAGGCTTCTTCCTA+CGG | 0.442210 | 6.2:+82849639 | MS.gene80841:CDS |
TGGATTGACACAAGAGGTTA+TGG | 0.444880 | 6.2:+82847584 | MS.gene80841:CDS |
GAACACTAACAATAAACTAA+TGG | 0.445235 | 6.2:+82849916 | MS.gene80841:CDS |
GTTGAGGAGGTTGAGGAGAG+AGG | 0.446003 | 6.2:+82847524 | MS.gene80841:CDS |
GAAGTTAAGTGAATTGTTGA+AGG | 0.447588 | 6.2:+82847308 | MS.gene80841:CDS |
GAACAGGAGGGTTGGTTACA+TGG | 0.450146 | 6.2:+82849281 | MS.gene80841:CDS |
ATGAATTGTTGAGGAGGTTG+AGG | 0.451522 | 6.2:+82847517 | MS.gene80841:CDS |
CGAGTGGTGTTCCGCCAGAT+TGG | 0.452047 | 6.2:+82850685 | MS.gene80841:CDS |
CCCGTAGGAAGAAGCCTATA+AGG | 0.452150 | 6.2:-82849640 | None:intergenic |
TTTCGTTCCGGATGTCTCAT+CGG | 0.455060 | 6.2:+82849396 | MS.gene80841:CDS |
TGGTCATAATCAGGACCAAC+TGG | 0.455808 | 6.2:-82850640 | None:intergenic |
TTGAGGAGGTTGAGGAGAGA+GGG | 0.456918 | 6.2:+82847525 | MS.gene80841:CDS |
CAGGAGGTACCTTGCTGCTA+AGG | 0.459510 | 6.2:+82850109 | MS.gene80841:CDS |
CCAGATTGGTTTAAGAATGA+AGG | 0.461011 | 6.2:+82850699 | MS.gene80841:CDS |
TGGAGAAGATTCATGAGAGC+TGG | 0.462471 | 6.2:+82847604 | MS.gene80841:CDS |
TTGAGAACATGCATTTGCAT+TGG | 0.463281 | 6.2:+82850842 | MS.gene80841:CDS |
TGTTGAAGGTAAAATGGGTT+CGG | 0.466964 | 6.2:+82847322 | MS.gene80841:CDS |
TCCTCATCCAATAAAACATC+AGG | 0.467042 | 6.2:-82847345 | None:intergenic |
AGGAAGAGGGGTTTAAGAAG+AGG | 0.471444 | 6.2:+82847454 | MS.gene80841:CDS |
TAGGTCCTCGATTTGTTGGA+TGG | 0.473413 | 6.2:+82849551 | MS.gene80841:CDS |
TTGAGTTCCTCCGGGGAAGC+AGG | 0.476788 | 6.2:-82849352 | None:intergenic |
CCTTATAGGCTTCTTCCTAC+GGG | 0.478093 | 6.2:+82849640 | MS.gene80841:CDS |
GAAATGAGGAGTATTGATAG+TGG | 0.481330 | 6.2:+82847417 | MS.gene80841:CDS |
GGAAGTAAATCAGCATCAAC+AGG | 0.483745 | 6.2:-82849592 | None:intergenic |
GAATAGCACATGCTAGGCCT+TGG | 0.484451 | 6.2:-82849838 | None:intergenic |
TATTTCATTGTTATATATCG+TGG | 0.488320 | 6.2:+82850138 | MS.gene80841:CDS |
AGGATTAATGTACCTAAAGC+TGG | 0.489396 | 6.2:+82847564 | MS.gene80841:CDS |
TTTGTTGGATGGTGGGGCAC+AGG | 0.494146 | 6.2:+82849562 | MS.gene80841:CDS |
TTTGAGGCTGTGGTTGAAAA+GGG | 0.499076 | 6.2:-82847143 | None:intergenic |
ATGAGAAAATGTTGGTTCCA+TGG | 0.499138 | 6.2:+82847376 | MS.gene80841:CDS |
TTACCAAGGTCCTGCTTCCC+CGG | 0.500206 | 6.2:+82849342 | MS.gene80841:CDS |
TTTCTAGGCCTTAGAGTAAG+TGG | 0.500851 | 6.2:-82851030 | None:intergenic |
TTTGCTATTATTTACTATCG+TGG | 0.505691 | 6.2:+82850991 | MS.gene80841:CDS |
CCTTTACATTGAGTTCCTCC+GGG | 0.507301 | 6.2:-82849360 | None:intergenic |
AAGAGCTTGCTAAGAATATG+AGG | 0.510686 | 6.2:+82847661 | MS.gene80841:CDS |
ATCAGGACCAACTGGAACCA+TGG | 0.513703 | 6.2:-82850632 | None:intergenic |
TTGTTAGTGTTCTGGATACC+GGG | 0.517192 | 6.2:-82849905 | None:intergenic |
GTGCAGAGATGACCGATTTG+AGG | 0.519522 | 6.2:+82849683 | MS.gene80841:CDS |
CCTCGATTTGTTGGATGGTG+GGG | 0.520723 | 6.2:+82849556 | MS.gene80841:CDS |
GGAATTGACAAAACAAGTAC+AGG | 0.520843 | 6.2:+82850209 | MS.gene80841:CDS |
AGGCCCAAGCTCGTTGGGGA+AGG | 0.521156 | 6.2:+82850328 | MS.gene80841:CDS |
AGGGTCTATCCGAAGATGAC+TGG | 0.524748 | 6.2:+82851510 | MS.gene80841:intron |
TCTATGAGGCCCAAGCTCGT+TGG | 0.525172 | 6.2:+82850322 | MS.gene80841:CDS |
TTTGTAACCAGGAACTTCAC+GGG | 0.525703 | 6.2:-82849614 | None:intergenic |
ATGTAACCAACCCTCCTGTT+CGG | 0.528670 | 6.2:-82849279 | None:intergenic |
AAATTTCCCGATGAGACATC+CGG | 0.529809 | 6.2:-82849403 | None:intergenic |
GATGACTGGAGCATGAAGGA+AGG | 0.531279 | 6.2:+82851524 | MS.gene80841:CDS |
GTCCTCGATTTGTTGGATGG+TGG | 0.533470 | 6.2:+82849554 | MS.gene80841:CDS |
AGATGAAGATGAGAAAATGT+TGG | 0.537584 | 6.2:+82847368 | MS.gene80841:CDS |
GGTGAAGCAACAGCACCGGC+TGG | 0.538189 | 6.2:+82850285 | MS.gene80841:CDS |
GGTGGTGGAATTAAGGAAGA+GGG | 0.541721 | 6.2:+82847441 | MS.gene80841:CDS |
ATTCTGAGGTGTGATCTAGT+TGG | 0.543991 | 6.2:-82851556 | None:intergenic |
AGTATTGATAGTGGTGGTGG+TGG | 0.547315 | 6.2:+82847426 | MS.gene80841:CDS |
ATCTTTAGCTGAGTTCTATG+AGG | 0.547865 | 6.2:+82850308 | MS.gene80841:CDS |
CATTGTTATATATCGTGGGA+AGG | 0.548061 | 6.2:+82850143 | MS.gene80841:CDS |
GGCCCAAGCTCGTTGGGGAA+GGG | 0.548840 | 6.2:+82850329 | MS.gene80841:CDS |
TGGTGGTGGAATTAAGGAAG+AGG | 0.550266 | 6.2:+82847440 | MS.gene80841:CDS |
AAAACTGCAGCCACACCTGT+TGG | 0.553284 | 6.2:-82850174 | None:intergenic |
CCCGGAGGAACTCAATGTAA+AGG | 0.553802 | 6.2:+82849360 | MS.gene80841:CDS |
CGGAACCTCATGGCGTAGCA+TGG | 0.555095 | 6.2:-82851091 | None:intergenic |
GAGAGGAAGAGAGAGAAATG+AGG | 0.555701 | 6.2:+82847403 | MS.gene80841:CDS |
CTTGAAAATAGTGAGCAAGT+TGG | 0.561427 | 6.2:+82849460 | MS.gene80841:CDS |
GTTTAAGAAGAGGACATTGA+AGG | 0.565815 | 6.2:+82847464 | MS.gene80841:CDS |
CCTCCGGGGAAGCAGGACCT+TGG | 0.568362 | 6.2:-82849345 | None:intergenic |
ATTTCATTGTTATATATCGT+GGG | 0.571100 | 6.2:+82850139 | MS.gene80841:CDS |
ATGAAGGCATACTTACAACT+TGG | 0.573632 | 6.2:+82850715 | MS.gene80841:CDS |
AGGAGTATTGATAGTGGTGG+TGG | 0.574701 | 6.2:+82847423 | MS.gene80841:CDS |
GCTTAAGAATAGCACATGCT+AGG | 0.575164 | 6.2:-82849844 | None:intergenic |
AGTGTCAATTCAGCTAAAGA+TGG | 0.577349 | 6.2:-82847489 | None:intergenic |
GCCTGAGAAAATGACAGAAG+AGG | 0.577742 | 6.2:+82849498 | MS.gene80841:CDS |
CGAAGATGACTGGAGCATGA+AGG | 0.578024 | 6.2:+82851520 | MS.gene80841:CDS |
TTTAGCTGAATTGACACTTG+AGG | 0.580547 | 6.2:+82847494 | MS.gene80841:CDS |
CACTTGAGGATGAATTGTTG+AGG | 0.587332 | 6.2:+82847508 | MS.gene80841:CDS |
AGTGTGCAGCGCCGAACAGG+AGG | 0.594399 | 6.2:+82849268 | MS.gene80841:intron |
AGTCGAGAACGCATCCCCGT+AGG | 0.594694 | 6.2:-82849655 | None:intergenic |
GGGTTGGTTACATGGAGAGC+GGG | 0.595272 | 6.2:+82849289 | MS.gene80841:CDS |
AGTACAGGATGTTGAAGAGA+AGG | 0.601070 | 6.2:+82850224 | MS.gene80841:CDS |
GCCTAGAAACCTTCTAACAA+AGG | 0.602939 | 6.2:+82851044 | MS.gene80841:CDS |
GTTGCTTCACCTTGTACAGA+CGG | 0.605122 | 6.2:-82850273 | None:intergenic |
AGTTGGTCCTGATTATGACC+AGG | 0.606914 | 6.2:+82850642 | MS.gene80841:CDS |
TTACCTAAGGCAAAATGACA+AGG | 0.608215 | 6.2:-82849724 | None:intergenic |
GCAGCGCCGAACAGGAGGGT+TGG | 0.609425 | 6.2:+82849273 | MS.gene80841:intron |
ATGACTGGAGCATGAAGGAA+GGG | 0.610304 | 6.2:+82851525 | MS.gene80841:CDS |
ACAAGGTGAAGCAACAGCAC+CGG | 0.610406 | 6.2:+82850281 | MS.gene80841:CDS |
GATTGCTCATCAGATTGTTG+AGG | 0.613802 | 6.2:+82847683 | MS.gene80841:CDS |
AACTCAGCTAAAGATCCAGC+CGG | 0.614166 | 6.2:-82850300 | None:intergenic |
GTTGCAACTCCGTCTGTACA+AGG | 0.615448 | 6.2:+82850264 | MS.gene80841:CDS |
GTGGTGGAATTAAGGAAGAG+GGG | 0.616258 | 6.2:+82847442 | MS.gene80841:CDS |
AAACCTTCTAACAAAGGCAA+AGG | 0.618172 | 6.2:+82851050 | MS.gene80841:CDS |
GGACTTTGTTCCAACAGGTG+TGG | 0.618264 | 6.2:+82850164 | MS.gene80841:CDS |
GAGGAACTCAATGTAAAGGA+AGG | 0.618449 | 6.2:+82849364 | MS.gene80841:CDS |
AGCCAAAATAGAATCATCCA+TGG | 0.620614 | 6.2:+82850615 | MS.gene80841:CDS |
GCAAAGATTGCTGTTAAACC+CGG | 0.621604 | 6.2:+82849887 | MS.gene80841:CDS |
TCTCACTCGGGTGAATTCTG+AGG | 0.622298 | 6.2:-82851570 | None:intergenic |
GAATCATCCATGGTTCCAGT+TGG | 0.624111 | 6.2:+82850625 | MS.gene80841:CDS |
TTGAGGATGAATTGTTGAGG+AGG | 0.624387 | 6.2:+82847511 | MS.gene80841:CDS |
TGTAGCCATGCTACGCCATG+AGG | 0.625498 | 6.2:+82851086 | MS.gene80841:CDS |
ATATCTATTCCTTAGCAGCA+AGG | 0.627334 | 6.2:-82850118 | None:intergenic |
AGAAGATTCATGAGAGCTGG+AGG | 0.631347 | 6.2:+82847607 | MS.gene80841:CDS |
CCCCACCATCCAACAAATCG+AGG | 0.635260 | 6.2:-82849556 | None:intergenic |
GTGTGCAGCGCCGAACAGGA+GGG | 0.656006 | 6.2:+82849269 | MS.gene80841:intron |
TGAGAGTGGTGGAATACTCG+TGG | 0.662154 | 6.2:+82850945 | MS.gene80841:CDS |
TATGAGGCCCAAGCTCGTTG+GGG | 0.663287 | 6.2:+82850324 | MS.gene80841:CDS |
GTTGGTTCCATGGAAGAGAG+AGG | 0.664996 | 6.2:+82847386 | MS.gene80841:CDS |
TATCTTCTGAAGAACAAGAG+AGG | 0.667701 | 6.2:+82850355 | MS.gene80841:CDS |
AAAATAGTGAGCAAGTTGGG+AGG | 0.667711 | 6.2:+82849464 | MS.gene80841:CDS |
TCATTCTTAAACCAATCTGG+CGG | 0.669508 | 6.2:-82850696 | None:intergenic |
AGTGTTATGATCGTGTATCG+TGG | 0.674468 | 6.2:+82849313 | MS.gene80841:CDS |
AATCACAGATGAAGAACGAG+TGG | 0.675351 | 6.2:+82850669 | MS.gene80841:CDS |
AGGTTACTGGAATATGAGAG+TGG | 0.675850 | 6.2:+82850931 | MS.gene80841:CDS |
ATGAGGAGTATTGATAGTGG+TGG | 0.676065 | 6.2:+82847420 | MS.gene80841:CDS |
TAAAGCTGGATTGACACAAG+AGG | 0.679407 | 6.2:+82847578 | MS.gene80841:CDS |
AGTAAATCAGCATCAACAGG+AGG | 0.680215 | 6.2:-82849589 | None:intergenic |
TTACTGGAATATGAGAGTGG+TGG | 0.680241 | 6.2:+82850934 | MS.gene80841:CDS |
AAAACATACACTGAGCTCGT+CGG | 0.686366 | 6.2:-82849939 | None:intergenic |
CTTATAGGCTTCTTCCTACG+GGG | 0.686485 | 6.2:+82849641 | MS.gene80841:CDS |
AGGGTTGGTTACATGGAGAG+CGG | 0.686978 | 6.2:+82849288 | MS.gene80841:CDS |
AGGATGTTGAAGAGAAGGTG+CGG | 0.691449 | 6.2:+82850229 | MS.gene80841:CDS |
CCAAGGTCCTGCTTCCCCGG+AGG | 0.701832 | 6.2:+82849345 | MS.gene80841:CDS |
ATATAATCTTCAGGTATACG+TGG | 0.709959 | 6.2:+82850802 | MS.gene80841:intron |
CTTTACATTGAGTTCCTCCG+GGG | 0.727581 | 6.2:-82849359 | None:intergenic |
TTGTAACCAGGAACTTCACG+GGG | 0.728029 | 6.2:-82849613 | None:intergenic |
GGGAGAAATAGAAATCACCA+AGG | 0.742961 | 6.2:+82849821 | MS.gene80841:intron |
ATGGTGCAGACATTAACAGG+AGG | 0.752569 | 6.2:+82850093 | MS.gene80841:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATAAAAAAAAAAAAAAAAA+AGG | - | chr6.2:82850492-82850511 | None:intergenic | 0.0% |
!! | AAAAAACATAGTTATTTAAT+TGG | - | chr6.2:82850533-82850552 | None:intergenic | 10.0% |
!! | AAATAAAATAACTTAGAATA+TGG | - | chr6.2:82848446-82848465 | None:intergenic | 10.0% |
!! | AAATTATTTAAATCTATAGA+CGG | - | chr6.2:82848607-82848626 | None:intergenic | 10.0% |
!! | AATTATTTAAATCTATAGAC+GGG | - | chr6.2:82848606-82848625 | None:intergenic | 15.0% |
!! | ACAGAAATATAAAAGATAAA+TGG | - | chr6.2:82851142-82851161 | None:intergenic | 15.0% |
!! | ATGATATTATTGAAATAAGT+TGG | + | chr6.2:82848024-82848043 | MS.gene80841:intron | 15.0% |
!! | TTACGAGAAAATAATTTAAT+TGG | - | chr6.2:82851658-82851677 | None:intergenic | 15.0% |
!!! | AGATTTAAATAATTTTTCCA+TGG | + | chr6.2:82848612-82848631 | MS.gene80841:intron | 15.0% |
!! | AAACAACTTATAGAGATATA+CGG | + | chr6.2:82848047-82848066 | MS.gene80841:intron | 20.0% |
!! | AAATAACTTAGAATATGGTT+TGG | - | chr6.2:82848441-82848460 | None:intergenic | 20.0% |
!! | AATATATAAATGTCAACAAC+AGG | - | chr6.2:82851362-82851381 | None:intergenic | 20.0% |
!! | AATTAAGCAAATAAAAGCAA+AGG | - | chr6.2:82848249-82848268 | None:intergenic | 20.0% |
!! | AGATTAAAGAAACTTATGAA+TGG | - | chr6.2:82850755-82850774 | None:intergenic | 20.0% |
!! | ATTTCATTGTTATATATCGT+GGG | + | chr6.2:82850139-82850158 | MS.gene80841:CDS | 20.0% |
!! | ATTTCGCTATTAATATAAAC+AGG | - | chr6.2:82848680-82848699 | None:intergenic | 20.0% |
!! | TAATAAAGCAGACAAAAATA+AGG | - | chr6.2:82851610-82851629 | None:intergenic | 20.0% |
!! | TATTCTCTTAAAATGATGTA+GGG | + | chr6.2:82851491-82851510 | MS.gene80841:intron | 20.0% |
!! | TATTTCATTGTTATATATCG+TGG | + | chr6.2:82850138-82850157 | MS.gene80841:CDS | 20.0% |
!! | TGAATCATTCAAAACAAATT+TGG | - | chr6.2:82851298-82851317 | None:intergenic | 20.0% |
!! | TTACTAATTTAACAAGTTCT+CGG | - | chr6.2:82850873-82850892 | None:intergenic | 20.0% |
!! | TTATTCTCTTAAAATGATGT+AGG | + | chr6.2:82851490-82851509 | MS.gene80841:intron | 20.0% |
!!! | AAACATTGTTTGTTTACTTT+TGG | + | chr6.2:82849210-82849229 | MS.gene80841:intron | 20.0% |
!!! | AAATAATTTTTCCATGGTTT+TGG | + | chr6.2:82848618-82848637 | MS.gene80841:intron | 20.0% |
!!! | CTATTTTCTTAAATTATGAC+TGG | + | chr6.2:82847803-82847822 | MS.gene80841:intron | 20.0% |
!!! | GATTTTTTTTTTAAAAGCAG+AGG | - | chr6.2:82848969-82848988 | None:intergenic | 20.0% |
!!! | TCCTTTATTTCATTTGATAA+GGG | + | chr6.2:82848274-82848293 | MS.gene80841:intron | 20.0% |
!!! | TCTTTTATGATATAATCTTC+AGG | + | chr6.2:82850793-82850812 | MS.gene80841:intron | 20.0% |
!!! | TTCCTTTATTTCATTTGATA+AGG | + | chr6.2:82848273-82848292 | MS.gene80841:intron | 20.0% |
!!! | TTTTTCATGTACTTTATGAA+GGG | + | chr6.2:82849801-82849820 | MS.gene80841:intron | 20.0% |
!!! | TTTTTTCATGTACTTTATGA+AGG | + | chr6.2:82849800-82849819 | MS.gene80841:intron | 20.0% |
! | AAAAGATTACATGAAAGACA+CGG | - | chr6.2:82848656-82848675 | None:intergenic | 25.0% |
! | AAATCAGCTTAAATGAAACT+AGG | - | chr6.2:82848561-82848580 | None:intergenic | 25.0% |
! | AACATGTGAAATTTATCAAG+TGG | + | chr6.2:82851270-82851289 | MS.gene80841:intron | 25.0% |
! | AAGACTAATATATAGTTGTG+CGG | + | chr6.2:82848479-82848498 | MS.gene80841:intron | 25.0% |
! | ACCCTTATCAAATGAAATAA+AGG | - | chr6.2:82848278-82848297 | None:intergenic | 25.0% |
! | AGCAACCTATGTTATTAATT+TGG | - | chr6.2:82848197-82848216 | None:intergenic | 25.0% |
! | ATACAACACATAAACTAGTA+TGG | - | chr6.2:82849024-82849043 | None:intergenic | 25.0% |
! | ATAGGTTGTAACAAGAAATT+AGG | + | chr6.2:82848107-82848126 | MS.gene80841:intron | 25.0% |
! | CATATTGTTGACATGTTAAT+AGG | - | chr6.2:82851436-82851455 | None:intergenic | 25.0% |
! | CTAAAAACAATTCTTTCAAC+AGG | - | chr6.2:82847180-82847199 | None:intergenic | 25.0% |
! | GAACACTAACAATAAACTAA+TGG | + | chr6.2:82849916-82849935 | MS.gene80841:CDS | 25.0% |
! | GTTTCACCAAATAAAAAAGT+GGG | + | chr6.2:82848814-82848833 | MS.gene80841:intron | 25.0% |
! | TAAATTTCACATGTTGAAGT+TGG | - | chr6.2:82851265-82851284 | None:intergenic | 25.0% |
! | TAAGAAAATAGAATCACGTT+CGG | - | chr6.2:82847794-82847813 | None:intergenic | 25.0% |
! | TAGTTATTTAATTGGCATTC+TGG | - | chr6.2:82850525-82850544 | None:intergenic | 25.0% |
! | TATATTAATAGCGAAATGCT+AGG | + | chr6.2:82848683-82848702 | MS.gene80841:intron | 25.0% |
! | TGAATTGTTGAAGGTAAAAT+GGG | + | chr6.2:82847317-82847336 | MS.gene80841:CDS | 25.0% |
! | TTAGTTTATTGTTAGTGTTC+TGG | - | chr6.2:82849916-82849935 | None:intergenic | 25.0% |
! | TTGTTTCCAATTCTGTAATA+TGG | - | chr6.2:82851209-82851228 | None:intergenic | 25.0% |
!! | AGTTTAATTTAGTGCTTGTT+TGG | + | chr6.2:82848001-82848020 | MS.gene80841:intron | 25.0% |
!! | ATGATATCTCTTTTCTGTTA+TGG | + | chr6.2:82850074-82850093 | MS.gene80841:intron | 25.0% |
!! | ATGTTTTATGAAGATATGCT+TGG | + | chr6.2:82850459-82850478 | MS.gene80841:intron | 25.0% |
!! | ATTCTTTCAACAGGATTTTT+CGG | - | chr6.2:82847171-82847190 | None:intergenic | 25.0% |
!! | CCTATGTTATTAATTTGGAT+CGG | - | chr6.2:82848192-82848211 | None:intergenic | 25.0% |
!! | TAACTTGTCACATAGAAAAT+CGG | - | chr6.2:82851114-82851133 | None:intergenic | 25.0% |
!! | TCAACAATATGTTTTCTCTA+AGG | + | chr6.2:82851445-82851464 | MS.gene80841:intron | 25.0% |
!! | TTCTTGTTTCATTTGTTCTA+TGG | - | chr6.2:82851232-82851251 | None:intergenic | 25.0% |
!! | TTTTGGATACTAATTTGGAT+TGG | - | chr6.2:82848167-82848186 | None:intergenic | 25.0% |
!!! | ACTTTTAAAACCCGTTTTAT+AGG | - | chr6.2:82849064-82849083 | None:intergenic | 25.0% |
!!! | ATTAATTTGGATCGGTTTTT+TGG | - | chr6.2:82848184-82848203 | None:intergenic | 25.0% |
!!! | CTGTTGAAAGAATTGTTTTT+AGG | + | chr6.2:82847178-82847197 | MS.gene80841:CDS | 25.0% |
!!! | GTTTTTAGGTTAAGAAACTT+AGG | + | chr6.2:82847192-82847211 | MS.gene80841:intron | 25.0% |
!!! | TACTAATTTGGATTGGTTTT+TGG | - | chr6.2:82848160-82848179 | None:intergenic | 25.0% |
!!! | TAGTAAAGTATTGAAGTGAA+TGG | - | chr6.2:82849753-82849772 | None:intergenic | 25.0% |
!!! | TTTGCTATTATTTACTATCG+TGG | + | chr6.2:82850991-82851010 | MS.gene80841:CDS | 25.0% |
AAAGATTACATGAAAGACAC+GGG | - | chr6.2:82848655-82848674 | None:intergenic | 30.0% | |
ACAAAAATAAGGAGAGAAGA+AGG | - | chr6.2:82851599-82851618 | None:intergenic | 30.0% | |
AGATGAAGATGAGAAAATGT+TGG | + | chr6.2:82847368-82847387 | MS.gene80841:CDS | 30.0% | |
AGGAATCATAACTTATTGAG+AGG | + | chr6.2:82848866-82848885 | MS.gene80841:intron | 30.0% | |
ATATAATCTTCAGGTATACG+TGG | + | chr6.2:82850802-82850821 | MS.gene80841:intron | 30.0% | |
ATCGTGGAAAAAATTACAAG+CGG | + | chr6.2:82851007-82851026 | MS.gene80841:CDS | 30.0% | |
CAAAAATAAGGAGAGAAGAA+GGG | - | chr6.2:82851598-82851617 | None:intergenic | 30.0% | |
CCAAATAAGTTGCGTATATT+TGG | + | chr6.2:82848130-82848149 | MS.gene80841:intron | 30.0% | |
CCAAATATACGCAACTTATT+TGG | - | chr6.2:82848133-82848152 | None:intergenic | 30.0% | |
CCGATCCAAATTAATAACAT+AGG | + | chr6.2:82848189-82848208 | MS.gene80841:intron | 30.0% | |
GAAGTTAAGTGAATTGTTGA+AGG | + | chr6.2:82847308-82847327 | MS.gene80841:CDS | 30.0% | |
GAGTAACCATATTACAGAAT+TGG | + | chr6.2:82851200-82851219 | MS.gene80841:CDS | 30.0% | |
GGTTTCACCAAATAAAAAAG+TGG | + | chr6.2:82848813-82848832 | MS.gene80841:intron | 30.0% | |
GTGAATTGTTGAAGGTAAAA+TGG | + | chr6.2:82847316-82847335 | MS.gene80841:CDS | 30.0% | |
GTGTATTGAAAGACTAGTAT+AGG | + | chr6.2:82848089-82848108 | MS.gene80841:intron | 30.0% | |
TATCACTCTTATGTGTGAAT+AGG | + | chr6.2:82850558-82850577 | MS.gene80841:intron | 30.0% | |
TATCGTGGTAAAAATTACCA+AGG | + | chr6.2:82849328-82849347 | MS.gene80841:CDS | 30.0% | |
TTGAAAATAGTGAGCAAGTT+GGG | + | chr6.2:82849461-82849480 | MS.gene80841:CDS | 30.0% | |
TTTGACAAGCTTAACATTCT+TGG | - | chr6.2:82850403-82850422 | None:intergenic | 30.0% | |
! | AACCATGGATGATTCTATTT+TGG | - | chr6.2:82850620-82850639 | None:intergenic | 30.0% |
! | ATGTGCTATTCTTAAGCTTT+GGG | + | chr6.2:82849850-82849869 | MS.gene80841:CDS | 30.0% |
! | ATTCTTTTGTTGCCAAGATA+TGG | + | chr6.2:82850011-82850030 | MS.gene80841:intron | 30.0% |
! | CTTTGCAATTTTCCTCAAAT+CGG | - | chr6.2:82849698-82849717 | None:intergenic | 30.0% |
! | TCCTTTATTTCACTTGACAA+GGG | + | chr6.2:82847886-82847905 | MS.gene80841:intron | 30.0% |
! | TTCCTTTATTTCACTTGACA+AGG | + | chr6.2:82847885-82847904 | MS.gene80841:intron | 30.0% |
!! | AACTTGCTCACTATTTTCAA+GGG | - | chr6.2:82849461-82849480 | None:intergenic | 30.0% |
!! | AAGTGAATGGATTTTACCTA+AGG | - | chr6.2:82849740-82849759 | None:intergenic | 30.0% |
!! | TTCTAGTCTTAACCATATCT+TGG | - | chr6.2:82850026-82850045 | None:intergenic | 30.0% |
!! | TTTCTCTAAGGTCAGTATAT+CGG | + | chr6.2:82851457-82851476 | MS.gene80841:intron | 30.0% |
!!! | CGGTTTTTTGGATACTAATT+TGG | - | chr6.2:82848172-82848191 | None:intergenic | 30.0% |
!!! | CTAACACCCACTTTTTTATT+TGG | - | chr6.2:82848823-82848842 | None:intergenic | 30.0% |
!!! | CTAACACTCACTTTTTTGTT+TGG | + | chr6.2:82848730-82848749 | MS.gene80841:intron | 30.0% |
!!! | TCATTTGATAAGGGTGTTTT+TGG | + | chr6.2:82848283-82848302 | MS.gene80841:intron | 30.0% |
AAACCTTCTAACAAAGGCAA+AGG | + | chr6.2:82851050-82851069 | MS.gene80841:CDS | 35.0% | |
AAGATTACATGAAAGACACG+GGG | - | chr6.2:82848654-82848673 | None:intergenic | 35.0% | |
AAGCTTAACATTCTTGGCTT+TGG | - | chr6.2:82850397-82850416 | None:intergenic | 35.0% | |
ACAGTAAAGTAAGCAAAGCA+AGG | - | chr6.2:82847722-82847741 | None:intergenic | 35.0% | |
ACATTCGTAATTCTCTCATC+TGG | + | chr6.2:82851331-82851350 | MS.gene80841:intron | 35.0% | |
AGCCAAAATAGAATCATCCA+TGG | + | chr6.2:82850615-82850634 | MS.gene80841:CDS | 35.0% | |
AGGATTAATGTACCTAAAGC+TGG | + | chr6.2:82847564-82847583 | MS.gene80841:CDS | 35.0% | |
AGTGTCAATTCAGCTAAAGA+TGG | - | chr6.2:82847492-82847511 | None:intergenic | 35.0% | |
ATATCTATTCCTTAGCAGCA+AGG | - | chr6.2:82850121-82850140 | None:intergenic | 35.0% | |
ATCTTTAGCTGAGTTCTATG+AGG | + | chr6.2:82850308-82850327 | MS.gene80841:CDS | 35.0% | |
ATTGTTTCCTGGTCATAATC+AGG | - | chr6.2:82850652-82850671 | None:intergenic | 35.0% | |
ATTTCCTTGTTCATCGTTCT+AGG | - | chr6.2:82850050-82850069 | None:intergenic | 35.0% | |
CAGTAAAGTAAGCAAAGCAA+GGG | - | chr6.2:82847721-82847740 | None:intergenic | 35.0% | |
CATATTCGCATTGAATAAGC+AGG | - | chr6.2:82848329-82848348 | None:intergenic | 35.0% | |
CATTGTTATATATCGTGGGA+AGG | + | chr6.2:82850143-82850162 | MS.gene80841:CDS | 35.0% | |
CCTTCATTCTTAAACCAATC+TGG | - | chr6.2:82850702-82850721 | None:intergenic | 35.0% | |
CTATGCTGTGTCCTATAAAA+CGG | + | chr6.2:82849050-82849069 | MS.gene80841:intron | 35.0% | |
CTGGTTACAAAACACCTTAT+AGG | + | chr6.2:82849626-82849645 | MS.gene80841:CDS | 35.0% | |
CTTGAAAATAGTGAGCAAGT+TGG | + | chr6.2:82849460-82849479 | MS.gene80841:CDS | 35.0% | |
GATTGCTCATGAGATTGTTT+AGG | + | chr6.2:82848408-82848427 | MS.gene80841:intron | 35.0% | |
GGAATTGACAAAACAAGTAC+AGG | + | chr6.2:82850209-82850228 | MS.gene80841:CDS | 35.0% | |
GTTTAAGAAGAGGACATTGA+AGG | + | chr6.2:82847464-82847483 | MS.gene80841:CDS | 35.0% | |
TATGCTGTGTCCTATAAAAC+GGG | + | chr6.2:82849051-82849070 | MS.gene80841:intron | 35.0% | |
TCATTCTTAAACCAATCTGG+CGG | - | chr6.2:82850699-82850718 | None:intergenic | 35.0% | |
TCCTCATCCAATAAAACATC+AGG | - | chr6.2:82847348-82847367 | None:intergenic | 35.0% | |
TGCTTATGATTGTTAGGGTT+GGG | + | chr6.2:82848892-82848911 | MS.gene80841:intron | 35.0% | |
TTACCTAAGGCAAAATGACA+AGG | - | chr6.2:82849727-82849746 | None:intergenic | 35.0% | |
TTGAGAACATGCATTTGCAT+TGG | + | chr6.2:82850842-82850861 | MS.gene80841:CDS | 35.0% | |
TTGAGTGCATTGAAAGTTAC+TGG | + | chr6.2:82847279-82847298 | MS.gene80841:intron | 35.0% | |
TTGCTTATGATTGTTAGGGT+TGG | + | chr6.2:82848891-82848910 | MS.gene80841:intron | 35.0% | |
TTGTTGTATGTGACACTTGT+CGG | + | chr6.2:82847765-82847784 | MS.gene80841:intron | 35.0% | |
TTTAGCTGAATTGACACTTG+AGG | + | chr6.2:82847494-82847513 | MS.gene80841:CDS | 35.0% | |
! | ATGAAGGCATACTTACAACT+TGG | + | chr6.2:82850715-82850734 | MS.gene80841:CDS | 35.0% |
! | ATTGTTAGTGTTCTGGATAC+CGG | - | chr6.2:82849909-82849928 | None:intergenic | 35.0% |
! | CATGTGCTATTCTTAAGCTT+TGG | + | chr6.2:82849849-82849868 | MS.gene80841:CDS | 35.0% |
! | GTTGGGGTGTCAATAAAATT+GGG | + | chr6.2:82848909-82848928 | MS.gene80841:intron | 35.0% |
! | TATCTTCTGAAGAACAAGAG+AGG | + | chr6.2:82850355-82850374 | MS.gene80841:CDS | 35.0% |
! | TGAAGTGCTTAAGTTTGATG+AGG | + | chr6.2:82848367-82848386 | MS.gene80841:intron | 35.0% |
! | TGTTGAAGGTAAAATGGGTT+CGG | + | chr6.2:82847322-82847341 | MS.gene80841:CDS | 35.0% |
! | TTATTTGGTGAAACCCATGT+GGG | - | chr6.2:82848808-82848827 | None:intergenic | 35.0% |
! | TTGTCTGCTTTATTATGCGA+AGG | + | chr6.2:82851615-82851634 | MS.gene80841:intron | 35.0% |
! | TTTATTTGGTGAAACCCATG+TGG | - | chr6.2:82848809-82848828 | None:intergenic | 35.0% |
! | TTTTGTAACCAGGAACTTCA+CGG | - | chr6.2:82849618-82849637 | None:intergenic | 35.0% |
!! | AAGAGCTTGCTAAGAATATG+AGG | + | chr6.2:82847661-82847680 | MS.gene80841:CDS | 35.0% |
!! | ACAGGATTTTTCGGTTTTTG+AGG | - | chr6.2:82847162-82847181 | None:intergenic | 35.0% |
!! | AGGTGTTGCTTATGATTGTT+AGG | + | chr6.2:82848886-82848905 | MS.gene80841:intron | 35.0% |
!! | ATGAGAAAATGTTGGTTCCA+TGG | + | chr6.2:82847376-82847395 | MS.gene80841:CDS | 35.0% |
!! | CAACTTGCTCACTATTTTCA+AGG | - | chr6.2:82849462-82849481 | None:intergenic | 35.0% |
!! | CCAGATTGGTTTAAGAATGA+AGG | + | chr6.2:82850699-82850718 | MS.gene80841:CDS | 35.0% |
!! | CTATAAGGTGTTTTGTAACC+AGG | - | chr6.2:82849628-82849647 | None:intergenic | 35.0% |
!! | GAAATGAGGAGTATTGATAG+TGG | + | chr6.2:82847417-82847436 | MS.gene80841:CDS | 35.0% |
!! | GATTCATGGTTTGGTTTGAT+GGG | + | chr6.2:82848527-82848546 | MS.gene80841:intron | 35.0% |
!! | GGTGTTGCTTATGATTGTTA+GGG | + | chr6.2:82848887-82848906 | MS.gene80841:intron | 35.0% |
AAAACATACACTGAGCTCGT+CGG | - | chr6.2:82849942-82849961 | None:intergenic | 40.0% | |
AAATTTCCCGATGAGACATC+CGG | - | chr6.2:82849406-82849425 | None:intergenic | 40.0% | |
AATCACAGATGAAGAACGAG+TGG | + | chr6.2:82850669-82850688 | MS.gene80841:CDS | 40.0% | |
ACCTTATAGGCTTCTTCCTA+CGG | + | chr6.2:82849639-82849658 | MS.gene80841:CDS | 40.0% | |
AGATTACATGAAAGACACGG+GGG | - | chr6.2:82848653-82848672 | None:intergenic | 40.0% | |
AGGTTACTGGAATATGAGAG+TGG | + | chr6.2:82850931-82850950 | MS.gene80841:CDS | 40.0% | |
AGTAAATCAGCATCAACAGG+AGG | - | chr6.2:82849592-82849611 | None:intergenic | 40.0% | |
AGTACAGGATGTTGAAGAGA+AGG | + | chr6.2:82850224-82850243 | MS.gene80841:CDS | 40.0% | |
AGTGAATGTACTCTGCACAA+TGG | - | chr6.2:82849168-82849187 | None:intergenic | 40.0% | |
AGTGTTATGATCGTGTATCG+TGG | + | chr6.2:82849313-82849332 | MS.gene80841:CDS | 40.0% | |
ATGAATTGTTGAGGAGGTTG+AGG | + | chr6.2:82847517-82847536 | MS.gene80841:CDS | 40.0% | |
ATGCCTTTGCCTTTGTTAGA+AGG | - | chr6.2:82851056-82851075 | None:intergenic | 40.0% | |
ATGCTTACTTGACTGAAGCA+CGG | - | chr6.2:82849115-82849134 | None:intergenic | 40.0% | |
CACTTGAGGATGAATTGTTG+AGG | + | chr6.2:82847508-82847527 | MS.gene80841:CDS | 40.0% | |
CATAGAAAATCGGAACCTCA+TGG | - | chr6.2:82851104-82851123 | None:intergenic | 40.0% | |
CTTCATCTGTGATTGTTTCC+TGG | - | chr6.2:82850663-82850682 | None:intergenic | 40.0% | |
GAGGAACTCAATGTAAAGGA+AGG | + | chr6.2:82849364-82849383 | MS.gene80841:CDS | 40.0% | |
GAGTGTCTATAACACGATTG+AGG | + | chr6.2:82848846-82848865 | MS.gene80841:intron | 40.0% | |
GATTGCTCATCAGATTGTTG+AGG | + | chr6.2:82847683-82847702 | MS.gene80841:CDS | 40.0% | |
GCCCTTGTCAAGTGAAATAA+AGG | - | chr6.2:82847890-82847909 | None:intergenic | 40.0% | |
GCCTAGAAACCTTCTAACAA+AGG | + | chr6.2:82851044-82851063 | MS.gene80841:CDS | 40.0% | |
GCCTTTGTTAGAAGGTTTCT+AGG | - | chr6.2:82851048-82851067 | None:intergenic | 40.0% | |
GCTTAAGAATAGCACATGCT+AGG | - | chr6.2:82849847-82849866 | None:intergenic | 40.0% | |
GCTTATGATTGTTAGGGTTG+GGG | + | chr6.2:82848893-82848912 | MS.gene80841:intron | 40.0% | |
GGAAGTAAATCAGCATCAAC+AGG | - | chr6.2:82849595-82849614 | None:intergenic | 40.0% | |
GGAGACATAAACCAAAACCA+TGG | - | chr6.2:82848632-82848651 | None:intergenic | 40.0% | |
GGGAGAAATAGAAATCACCA+AGG | + | chr6.2:82849821-82849840 | MS.gene80841:intron | 40.0% | |
GGTTGCTCATTAGATTGTTG+AGG | + | chr6.2:82848210-82848229 | MS.gene80841:intron | 40.0% | |
GTGCTTGTTCATGTCTTGTA+TGG | + | chr6.2:82847976-82847995 | MS.gene80841:intron | 40.0% | |
GTTATGGTGCAGACATTAAC+AGG | + | chr6.2:82850090-82850109 | MS.gene80841:intron | 40.0% | |
TAAAAGCAGAGGTGAGTCAA+AGG | - | chr6.2:82848958-82848977 | None:intergenic | 40.0% | |
TAAAGCTGGATTGACACAAG+AGG | + | chr6.2:82847578-82847597 | MS.gene80841:CDS | 40.0% | |
TCCTTTACATTGAGTTCCTC+CGG | - | chr6.2:82849364-82849383 | None:intergenic | 40.0% | |
TCGAAATGGATCACCAAAAG+TGG | - | chr6.2:82848776-82848795 | None:intergenic | 40.0% | |
TCTTGTGTCAATCCAGCTTT+AGG | - | chr6.2:82847579-82847598 | None:intergenic | 40.0% | |
TGATCTTGCATGAACTGTAC+AGG | + | chr6.2:82851173-82851192 | MS.gene80841:intron | 40.0% | |
TGGATTGACACAAGAGGTTA+TGG | + | chr6.2:82847584-82847603 | MS.gene80841:CDS | 40.0% | |
TTACTGGAATATGAGAGTGG+TGG | + | chr6.2:82850934-82850953 | MS.gene80841:CDS | 40.0% | |
TTGAGGATGAATTGTTGAGG+AGG | + | chr6.2:82847511-82847530 | MS.gene80841:CDS | 40.0% | |
TTTCTAGGCCTTAGAGTAAG+TGG | - | chr6.2:82851033-82851052 | None:intergenic | 40.0% | |
TTTGTAACCAGGAACTTCAC+GGG | - | chr6.2:82849617-82849636 | None:intergenic | 40.0% | |
! | AAAATAGTGAGCAAGTTGGG+AGG | + | chr6.2:82849464-82849483 | MS.gene80841:CDS | 40.0% |
! | AATGCGCTGCTTGATGATTT+AGG | + | chr6.2:82849532-82849551 | MS.gene80841:CDS | 40.0% |
! | CTTTTGTTGAAGACACAGCT+AGG | + | chr6.2:82850911-82850930 | MS.gene80841:CDS | 40.0% |
! | GATTTAGGTCCTCGATTTGT+TGG | + | chr6.2:82849547-82849566 | MS.gene80841:CDS | 40.0% |
! | GCAAAGATTGCTGTTAAACC+CGG | + | chr6.2:82849887-82849906 | MS.gene80841:CDS | 40.0% |
! | GGTTGGGGTGTCAATAAAAT+TGG | + | chr6.2:82848908-82848927 | MS.gene80841:intron | 40.0% |
! | TGCTCTATGCAATTTGTTCG+CGG | - | chr6.2:82850584-82850603 | None:intergenic | 40.0% |
! | TGGTATTGGGATTCATGGTT+TGG | + | chr6.2:82848518-82848537 | MS.gene80841:intron | 40.0% |
! | TTGTTAGTGTTCTGGATACC+GGG | - | chr6.2:82849908-82849927 | None:intergenic | 40.0% |
! | TTGTTTGGTGAAACCCATGT+GGG | + | chr6.2:82848745-82848764 | MS.gene80841:intron | 40.0% |
! | TTTGAGGCTGTGGTTGAAAA+GGG | - | chr6.2:82847146-82847165 | None:intergenic | 40.0% |
! | TTTGTTTGGTGAAACCCATG+TGG | + | chr6.2:82848744-82848763 | MS.gene80841:intron | 40.0% |
!! | AGAAGCACTAACATTGACAC+CGG | - | chr6.2:82847851-82847870 | None:intergenic | 40.0% |
!! | ATGAGGAGTATTGATAGTGG+TGG | + | chr6.2:82847420-82847439 | MS.gene80841:CDS | 40.0% |
!! | ATTCTGAGGTGTGATCTAGT+TGG | - | chr6.2:82851559-82851578 | None:intergenic | 40.0% |
!! | GCCTGATGTTTTATTGGATG+AGG | + | chr6.2:82847344-82847363 | MS.gene80841:CDS | 40.0% |
!! | GGATTCATGGTTTGGTTTGA+TGG | + | chr6.2:82848526-82848545 | MS.gene80841:intron | 40.0% |
!!! | AGGTGACGATTTTTTCGTTC+CGG | + | chr6.2:82849384-82849403 | MS.gene80841:CDS | 40.0% |
!!! | CTTCCTTGTCATTTTGCCTT+AGG | + | chr6.2:82849721-82849740 | MS.gene80841:CDS | 40.0% |
!!! | TCCTCTTCTGTCATTTTCTC+AGG | - | chr6.2:82849502-82849521 | None:intergenic | 40.0% |
!!! | TTTTGAGGCTGTGGTTGAAA+AGG | - | chr6.2:82847147-82847166 | None:intergenic | 40.0% |
!!! | TTTTTCGGTTTTTGAGGCTG+TGG | - | chr6.2:82847156-82847175 | None:intergenic | 40.0% |
AAAAGTGGTGAGACCCACAT+GGG | - | chr6.2:82848761-82848780 | None:intergenic | 45.0% | |
AACTCAGCTAAAGATCCAGC+CGG | - | chr6.2:82850303-82850322 | None:intergenic | 45.0% | |
AGAAGATTCATGAGAGCTGG+AGG | + | chr6.2:82847607-82847626 | MS.gene80841:CDS | 45.0% | |
AGGAAGAGGGGTTTAAGAAG+AGG | + | chr6.2:82847454-82847473 | MS.gene80841:CDS | 45.0% | |
AGGATGTTGAAGAGAAGGTG+CGG | + | chr6.2:82850229-82850248 | MS.gene80841:CDS | 45.0% | |
AGGGTATGCATTTGAGAGAG+AGG | + | chr6.2:82847544-82847563 | MS.gene80841:CDS | 45.0% | |
AGTTGGTCCTGATTATGACC+AGG | + | chr6.2:82850642-82850661 | MS.gene80841:CDS | 45.0% | |
ATGACTGGAGCATGAAGGAA+GGG | + | chr6.2:82851525-82851544 | MS.gene80841:CDS | 45.0% | |
ATGGTGCAGACATTAACAGG+AGG | + | chr6.2:82850093-82850112 | MS.gene80841:intron | 45.0% | |
ATGTAACCAACCCTCCTGTT+CGG | - | chr6.2:82849282-82849301 | None:intergenic | 45.0% | |
CCTTATAGGCTTCTTCCTAC+GGG | + | chr6.2:82849640-82849659 | MS.gene80841:CDS | 45.0% | |
CCTTTACATTGAGTTCCTCC+GGG | - | chr6.2:82849363-82849382 | None:intergenic | 45.0% | |
CTTATAGGCTTCTTCCTACG+GGG | + | chr6.2:82849641-82849660 | MS.gene80841:CDS | 45.0% | |
CTTCATGCTCCAGTCATCTT+CGG | - | chr6.2:82851522-82851541 | None:intergenic | 45.0% | |
CTTTACATTGAGTTCCTCCG+GGG | - | chr6.2:82849362-82849381 | None:intergenic | 45.0% | |
GAAGCCTAGAACGATGAACA+AGG | + | chr6.2:82850043-82850062 | MS.gene80841:intron | 45.0% | |
GAATCATCCATGGTTCCAGT+TGG | + | chr6.2:82850625-82850644 | MS.gene80841:CDS | 45.0% | |
GAGAGGAAGAGAGAGAAATG+AGG | + | chr6.2:82847403-82847422 | MS.gene80841:CDS | 45.0% | |
GAGGAACTGTTGAGAACATG+AGG | + | chr6.2:82848386-82848405 | MS.gene80841:intron | 45.0% | |
GCCTGAGAAAATGACAGAAG+AGG | + | chr6.2:82849498-82849517 | MS.gene80841:CDS | 45.0% | |
GTTGCTTCACCTTGTACAGA+CGG | - | chr6.2:82850276-82850295 | None:intergenic | 45.0% | |
TCATGAGAGCTGGAGGAAAA+AGG | + | chr6.2:82847614-82847633 | MS.gene80841:CDS | 45.0% | |
TGAAGACACAGCTAGGTTAC+TGG | + | chr6.2:82850918-82850937 | MS.gene80841:CDS | 45.0% | |
TGGAGAAGATTCATGAGAGC+TGG | + | chr6.2:82847604-82847623 | MS.gene80841:CDS | 45.0% | |
TGGTCATAATCAGGACCAAC+TGG | - | chr6.2:82850643-82850662 | None:intergenic | 45.0% | |
TTGTAACCAGGAACTTCACG+GGG | - | chr6.2:82849616-82849635 | None:intergenic | 45.0% | |
TTTCGTTCCGGATGTCTCAT+CGG | + | chr6.2:82849396-82849415 | MS.gene80841:CDS | 45.0% | |
! | ACTCGTGGTATTGGGATTCA+TGG | + | chr6.2:82848513-82848532 | MS.gene80841:intron | 45.0% |
! | GGAGGAAAAAGGAGTTGGTT+AGG | + | chr6.2:82847625-82847644 | MS.gene80841:CDS | 45.0% |
! | GGTATACGTGGTGTTTTCGA+TGG | + | chr6.2:82850814-82850833 | MS.gene80841:intron | 45.0% |
! | GGTTCGGCCTGATGTTTTAT+TGG | + | chr6.2:82847338-82847357 | MS.gene80841:CDS | 45.0% |
! | GTGGTGGAATTAAGGAAGAG+GGG | + | chr6.2:82847442-82847461 | MS.gene80841:CDS | 45.0% |
!! | AAGCTTGCTACTCGTGGTAT+TGG | + | chr6.2:82848504-82848523 | MS.gene80841:intron | 45.0% |
!! | AGAAGAAGGGTATCTCACTC+GGG | - | chr6.2:82851585-82851604 | None:intergenic | 45.0% |
!! | AGCTTGCTACTCGTGGTATT+GGG | + | chr6.2:82848505-82848524 | MS.gene80841:intron | 45.0% |
!! | AGGAGTATTGATAGTGGTGG+TGG | + | chr6.2:82847423-82847442 | MS.gene80841:CDS | 45.0% |
!! | AGTATTGATAGTGGTGGTGG+TGG | + | chr6.2:82847426-82847445 | MS.gene80841:CDS | 45.0% |
!! | ATGACTGGTGCTGACATGTT+AGG | + | chr6.2:82847818-82847837 | MS.gene80841:intron | 45.0% |
!! | GAGAAGAAGGGTATCTCACT+CGG | - | chr6.2:82851586-82851605 | None:intergenic | 45.0% |
!! | GGTGGTGGAATTAAGGAAGA+GGG | + | chr6.2:82847441-82847460 | MS.gene80841:CDS | 45.0% |
!! | TAGGTCCTCGATTTGTTGGA+TGG | + | chr6.2:82849551-82849570 | MS.gene80841:CDS | 45.0% |
!! | TAGTGGTGGTGGTGGAATTA+AGG | + | chr6.2:82847434-82847453 | MS.gene80841:CDS | 45.0% |
!! | TCCTCGATTTGTTGGATGGT+GGG | + | chr6.2:82849555-82849574 | MS.gene80841:CDS | 45.0% |
!! | TGACTGGTGCTGACATGTTA+GGG | + | chr6.2:82847819-82847838 | MS.gene80841:intron | 45.0% |
!! | TGGTGGTGGAATTAAGGAAG+AGG | + | chr6.2:82847440-82847459 | MS.gene80841:CDS | 45.0% |
!!! | TGCAGTTTTGGCTGAAAGAC+AGG | + | chr6.2:82850188-82850207 | MS.gene80841:CDS | 45.0% |
AAAACTGCAGCCACACCTGT+TGG | - | chr6.2:82850177-82850196 | None:intergenic | 50.0% | |
ACAAGCGGCCACTTACTCTA+AGG | + | chr6.2:82851022-82851041 | MS.gene80841:CDS | 50.0% | |
ACAAGGTGAAGCAACAGCAC+CGG | + | chr6.2:82850281-82850300 | MS.gene80841:CDS | 50.0% | |
AGGGTCTATCCGAAGATGAC+TGG | + | chr6.2:82851510-82851529 | MS.gene80841:intron | 50.0% | |
ATCAGGACCAACTGGAACCA+TGG | - | chr6.2:82850635-82850654 | None:intergenic | 50.0% | |
CAAAAGTGGTGAGACCCACA+TGG | - | chr6.2:82848762-82848781 | None:intergenic | 50.0% | |
CCCGGAGGAACTCAATGTAA+AGG | + | chr6.2:82849360-82849379 | MS.gene80841:CDS | 50.0% | |
CCCGTAGGAAGAAGCCTATA+AGG | - | chr6.2:82849643-82849662 | None:intergenic | 50.0% | |
CGAAGATGACTGGAGCATGA+AGG | + | chr6.2:82851520-82851539 | MS.gene80841:CDS | 50.0% | |
CTCTCTTCCTCTCTCTTCCA+TGG | - | chr6.2:82847396-82847415 | None:intergenic | 50.0% | |
GAATAGCACATGCTAGGCCT+TGG | - | chr6.2:82849841-82849860 | None:intergenic | 50.0% | |
GAGCTGGAGGAAAAAGGAGT+TGG | + | chr6.2:82847620-82847639 | MS.gene80841:CDS | 50.0% | |
GATGACTGGAGCATGAAGGA+AGG | + | chr6.2:82851524-82851543 | MS.gene80841:CDS | 50.0% | |
GGACTTTGTTCCAACAGGTG+TGG | + | chr6.2:82850164-82850183 | MS.gene80841:CDS | 50.0% | |
GGGAAGGACTTTGTTCCAAC+AGG | + | chr6.2:82850159-82850178 | MS.gene80841:CDS | 50.0% | |
GTTGCAACTCCGTCTGTACA+AGG | + | chr6.2:82850264-82850283 | MS.gene80841:CDS | 50.0% | |
TCTCACTCGGGTGAATTCTG+AGG | - | chr6.2:82851573-82851592 | None:intergenic | 50.0% | |
TGACATGTTAGGGTCGTGTC+CGG | + | chr6.2:82847829-82847848 | MS.gene80841:intron | 50.0% | |
TTACTTCCCCGTGAAGTTCC+TGG | + | chr6.2:82849607-82849626 | MS.gene80841:CDS | 50.0% | |
TTACTTGACTGAAGCACGGC+AGG | - | chr6.2:82849111-82849130 | None:intergenic | 50.0% | |
TTCGTTCCGGATGTCTCATC+GGG | + | chr6.2:82849397-82849416 | MS.gene80841:CDS | 50.0% | |
TTGAGGAGGTTGAGGAGAGA+GGG | + | chr6.2:82847525-82847544 | MS.gene80841:CDS | 50.0% | |
! | AACAGGTGTGGCTGCAGTTT+TGG | + | chr6.2:82850176-82850195 | MS.gene80841:CDS | 50.0% |
! | AGTCAAAGGCGCGAGTATAG+AGG | - | chr6.2:82848944-82848963 | None:intergenic | 50.0% |
! | CATGTGGGTCTCACCACTTT+TGG | + | chr6.2:82848760-82848779 | MS.gene80841:intron | 50.0% |
! | GTTGGTTCCATGGAAGAGAG+AGG | + | chr6.2:82847386-82847405 | MS.gene80841:CDS | 50.0% |
! | TGAGAGTGGTGGAATACTCG+TGG | + | chr6.2:82850945-82850964 | MS.gene80841:CDS | 50.0% |
!! | AGGGTTGGTTACATGGAGAG+CGG | + | chr6.2:82849288-82849307 | MS.gene80841:CDS | 50.0% |
!! | CCTCGATTTGTTGGATGGTG+GGG | + | chr6.2:82849556-82849575 | MS.gene80841:CDS | 50.0% |
!! | GAACAGGAGGGTTGGTTACA+TGG | + | chr6.2:82849281-82849300 | MS.gene80841:CDS | 50.0% |
!! | GTCCTCGATTTGTTGGATGG+TGG | + | chr6.2:82849554-82849573 | MS.gene80841:CDS | 50.0% |
!! | GTGCAGAGATGACCGATTTG+AGG | + | chr6.2:82849683-82849702 | MS.gene80841:CDS | 50.0% |
!! | GTGGGCTAGCACTTTCGAAA+TGG | - | chr6.2:82848790-82848809 | None:intergenic | 50.0% |
!! | TCACTTGACAAGGGCGTCAA+TGG | + | chr6.2:82847895-82847914 | MS.gene80841:intron | 50.0% |
!! | TCGAAAGTGCTAGCCCACAT+GGG | + | chr6.2:82848792-82848811 | MS.gene80841:intron | 50.0% |
!! | TTCGAAAGTGCTAGCCCACA+TGG | + | chr6.2:82848791-82848810 | MS.gene80841:intron | 50.0% |
CCCCACCATCCAACAAATCG+AGG | - | chr6.2:82849559-82849578 | None:intergenic | 55.0% | |
CTATGAGGCCCAAGCTCGTT+GGG | + | chr6.2:82850323-82850342 | MS.gene80841:CDS | 55.0% | |
GGGATGCGTTCTCGACTAAC+AGG | + | chr6.2:82849661-82849680 | MS.gene80841:CDS | 55.0% | |
GTTGAGGAGGTTGAGGAGAG+AGG | + | chr6.2:82847524-82847543 | MS.gene80841:CDS | 55.0% | |
TATGAGGCCCAAGCTCGTTG+GGG | + | chr6.2:82850324-82850343 | MS.gene80841:CDS | 55.0% | |
TCTATGAGGCCCAAGCTCGT+TGG | + | chr6.2:82850322-82850341 | MS.gene80841:CDS | 55.0% | |
TGTAGCCATGCTACGCCATG+AGG | + | chr6.2:82851086-82851105 | MS.gene80841:CDS | 55.0% | |
TTACCAAGGTCCTGCTTCCC+CGG | + | chr6.2:82849342-82849361 | MS.gene80841:CDS | 55.0% | |
!! | CAGGAGGTACCTTGCTGCTA+AGG | + | chr6.2:82850109-82850128 | MS.gene80841:CDS | 55.0% |
!! | GCGGATAAGCTTGCTACTCG+TGG | + | chr6.2:82848498-82848517 | MS.gene80841:intron | 55.0% |
!! | GGGTTGGTTACATGGAGAGC+GGG | + | chr6.2:82849289-82849308 | MS.gene80841:CDS | 55.0% |
!! | TTTGTTGGATGGTGGGGCAC+AGG | + | chr6.2:82849562-82849581 | MS.gene80841:CDS | 55.0% |
AGTCGAGAACGCATCCCCGT+AGG | - | chr6.2:82849658-82849677 | None:intergenic | 60.0% | |
CGAGTGGTGTTCCGCCAGAT+TGG | + | chr6.2:82850685-82850704 | MS.gene80841:CDS | 60.0% | |
CGGAACCTCATGGCGTAGCA+TGG | - | chr6.2:82851094-82851113 | None:intergenic | 60.0% | |
GTCCCTTCCCCAACGAGCTT+GGG | - | chr6.2:82850334-82850353 | None:intergenic | 60.0% | |
TCGGCGCTGCACACTACAAC+AGG | - | chr6.2:82849263-82849282 | None:intergenic | 60.0% | |
TGTCCCTTCCCCAACGAGCT+TGG | - | chr6.2:82850335-82850354 | None:intergenic | 60.0% | |
TTGAGTTCCTCCGGGGAAGC+AGG | - | chr6.2:82849355-82849374 | None:intergenic | 60.0% | |
! | TGTAGTGTGCAGCGCCGAAC+AGG | + | chr6.2:82849265-82849284 | MS.gene80841:intron | 60.0% |
AGGCCCAAGCTCGTTGGGGA+AGG | + | chr6.2:82850328-82850347 | MS.gene80841:CDS | 65.0% | |
GGCCCAAGCTCGTTGGGGAA+GGG | + | chr6.2:82850329-82850348 | MS.gene80841:CDS | 65.0% | |
! | AGTGTGCAGCGCCGAACAGG+AGG | + | chr6.2:82849268-82849287 | MS.gene80841:intron | 65.0% |
! | GTGTGCAGCGCCGAACAGGA+GGG | + | chr6.2:82849269-82849288 | MS.gene80841:intron | 65.0% |
!! | GGTGAAGCAACAGCACCGGC+TGG | + | chr6.2:82850285-82850304 | MS.gene80841:CDS | 65.0% |
CCAAGGTCCTGCTTCCCCGG+AGG | + | chr6.2:82849345-82849364 | MS.gene80841:CDS | 70.0% | |
CCTCCGGGGAAGCAGGACCT+TGG | - | chr6.2:82849348-82849367 | None:intergenic | 70.0% | |
! | GCAGCGCCGAACAGGAGGGT+TGG | + | chr6.2:82849273-82849292 | MS.gene80841:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 82847139 | 82851698 | 82847139 | ID=MS.gene80841 |
chr6.2 | mRNA | 82847139 | 82851698 | 82847139 | ID=MS.gene80841.t1;Parent=MS.gene80841 |
chr6.2 | exon | 82847139 | 82847199 | 82847139 | ID=MS.gene80841.t1.exon1;Parent=MS.gene80841.t1 |
chr6.2 | CDS | 82847139 | 82847199 | 82847139 | ID=cds.MS.gene80841.t1;Parent=MS.gene80841.t1 |
chr6.2 | exon | 82847295 | 82847704 | 82847295 | ID=MS.gene80841.t1.exon2;Parent=MS.gene80841.t1 |
chr6.2 | CDS | 82847295 | 82847704 | 82847295 | ID=cds.MS.gene80841.t1;Parent=MS.gene80841.t1 |
chr6.2 | exon | 82849277 | 82849742 | 82849277 | ID=MS.gene80841.t1.exon3;Parent=MS.gene80841.t1 |
chr6.2 | CDS | 82849277 | 82849742 | 82849277 | ID=cds.MS.gene80841.t1;Parent=MS.gene80841.t1 |
chr6.2 | exon | 82849822 | 82849952 | 82849822 | ID=MS.gene80841.t1.exon4;Parent=MS.gene80841.t1 |
chr6.2 | CDS | 82849822 | 82849952 | 82849822 | ID=cds.MS.gene80841.t1;Parent=MS.gene80841.t1 |
chr6.2 | exon | 82850102 | 82850446 | 82850102 | ID=MS.gene80841.t1.exon5;Parent=MS.gene80841.t1 |
chr6.2 | CDS | 82850102 | 82850446 | 82850102 | ID=cds.MS.gene80841.t1;Parent=MS.gene80841.t1 |
chr6.2 | exon | 82850580 | 82850736 | 82850580 | ID=MS.gene80841.t1.exon6;Parent=MS.gene80841.t1 |
chr6.2 | CDS | 82850580 | 82850736 | 82850580 | ID=cds.MS.gene80841.t1;Parent=MS.gene80841.t1 |
chr6.2 | exon | 82850815 | 82851107 | 82850815 | ID=MS.gene80841.t1.exon7;Parent=MS.gene80841.t1 |
chr6.2 | CDS | 82850815 | 82851107 | 82850815 | ID=cds.MS.gene80841.t1;Parent=MS.gene80841.t1 |
chr6.2 | exon | 82851195 | 82851254 | 82851195 | ID=MS.gene80841.t1.exon8;Parent=MS.gene80841.t1 |
chr6.2 | CDS | 82851195 | 82851254 | 82851195 | ID=cds.MS.gene80841.t1;Parent=MS.gene80841.t1 |
chr6.2 | exon | 82851512 | 82851586 | 82851512 | ID=MS.gene80841.t1.exon9;Parent=MS.gene80841.t1 |
chr6.2 | CDS | 82851512 | 82851586 | 82851512 | ID=cds.MS.gene80841.t1;Parent=MS.gene80841.t1 |
chr6.2 | exon | 82851684 | 82851698 | 82851684 | ID=MS.gene80841.t1.exon10;Parent=MS.gene80841.t1 |
chr6.2 | CDS | 82851684 | 82851698 | 82851684 | ID=cds.MS.gene80841.t1;Parent=MS.gene80841.t1 |
Gene Sequence |
Protein sequence |