AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006501.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006501.01.T01 MTR_2g009630 92.737 179 12 1 58 235 1 179 6.55e-111 317
MsG0280006501.01.T01 MTR_3g062480 89.796 49 5 0 1 49 1 49 1.62e-24 92.8
MsG0280006501.01.T01 MTR_4g108770 72.222 54 10 1 1 49 1 54 1.23e-15 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006501.01.T01 AT4G33625 67.760 183 55 1 61 243 5 183 2.98e-88 260
MsG0280006501.01.T01 AT4G33625 67.033 182 56 1 61 242 5 182 8.84e-86 254
MsG0280006501.01.T01 AT4G33625 67.785 149 44 1 61 209 5 149 1.44e-68 209

Find 89 sgRNAs with CRISPR-Local

Find 396 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAATATCTAAAGGCGATAT+TGG 0.249737 2:-2813059 MsG0280006501.01.T01:three_prime_UTR
TAGAAAAGTTGGTAGAAAAT+AGG 0.288105 2:-2819553 MsG0280006501.01.T01:five_prime_UTR
GTAACCAACACTAACATAAA+AGG 0.301548 2:+2813130 None:intergenic
GCAGCACTACCACACGAAAT+TGG 0.313429 2:+2818071 None:intergenic
AAATATCTAAAGGCGATATT+GGG 0.318111 2:-2813058 MsG0280006501.01.T01:three_prime_UTR
GAAAATAGGCTTAGATGGTT+TGG 0.322680 2:-2819539 MsG0280006501.01.T01:five_prime_UTR
CTCTAGTGATCTCTTGCTTC+TGG 0.322823 2:+2813853 None:intergenic
AGTTGTTGATTATAAATTGC+TGG 0.333635 2:-2818117 MsG0280006501.01.T01:CDS
TGGAAACGGATCCAGGAATT+AGG 0.348896 2:-2818097 MsG0280006501.01.T01:CDS
TGGTAGAAAATAGGCTTAGA+TGG 0.349489 2:-2819544 MsG0280006501.01.T01:five_prime_UTR
CTCGAACTCGTACGTAGAAC+TGG 0.363873 2:+2816457 None:intergenic
TTCTCGAGTATTGGGCAGGC+AGG 0.377149 2:-2816018 MsG0280006501.01.T01:CDS
TGCTTACTTTACTCTCGTGT+TGG 0.399784 2:+2819675 None:intergenic
GAAATTGGAGGCCTAATTCC+TGG 0.407000 2:+2818086 None:intergenic
AGAGCTTTCCCTGGCTATAG+TGG 0.408839 2:-2814520 MsG0280006501.01.T01:CDS
TAGAGAATGAACAAACGATA+TGG 0.408890 2:+2813108 None:intergenic
AGACTAGACATGATAGGATT+AGG 0.412117 2:-2819616 MsG0280006501.01.T01:five_prime_UTR
TGGCGTAGTTTACGTTATCT+TGG 0.420109 2:-2814440 MsG0280006501.01.T01:intron
ACACCCTCATTGATCGAGTT+GGG 0.433615 2:+2818143 None:intergenic
AGTCATGTTAAAAGAGGTAG+AGG 0.455911 2:-2819458 MsG0280006501.01.T01:five_prime_UTR
TTTCGTGTGGTAGTGCTGCC+AGG 0.458757 2:-2818067 MsG0280006501.01.T01:intron
CATATTTGGATCCAACTCAT+TGG 0.462823 2:+2819388 None:intergenic
TTCTCTTCATCTTCCTCTCT+AGG 0.465361 2:+2816490 None:intergenic
TGATTATAAATTGCTGGAAA+CGG 0.465509 2:-2818111 MsG0280006501.01.T01:CDS
TGCTATTTGCTTCTTTCTTG+TGG 0.467457 2:-2814460 MsG0280006501.01.T01:CDS
CAAAGCTAGTTCTTCGACTA+CGG 0.467935 2:-2818174 MsG0280006501.01.T01:CDS
CTAACATAAAAGGCATTCAT+AGG 0.469430 2:+2813140 None:intergenic
ACTAAGTGGGGTCGGCTACA+TGG 0.470126 2:+2819315 None:intergenic
AACACCCTCATTGATCGAGT+TGG 0.479925 2:+2818142 None:intergenic
GCTGAAATTGTCTAATTACT+TGG 0.480632 2:-2813196 MsG0280006501.01.T01:three_prime_UTR
AAATTGCTGGAAACGGATCC+AGG 0.484543 2:-2818104 MsG0280006501.01.T01:CDS
TTTCGCTCCCCACTATAGCC+AGG 0.487874 2:+2814511 None:intergenic
AACAGCAGAGAGAACGTTAA+CGG 0.491540 2:+2816336 None:intergenic
TGTAAGAAGAGTAAATCAAA+TGG 0.499792 2:-2819486 MsG0280006501.01.T01:five_prime_UTR
TGGTTCTCGTTGAGACTGAA+TGG 0.505524 2:-2816142 MsG0280006501.01.T01:CDS
CTCGAGTATTGGGCAGGCAG+GGG 0.509030 2:-2816016 MsG0280006501.01.T01:CDS
GTTGTATGGTACGGAGTGTT+GGG 0.511641 2:-2819708 MsG0280006501.01.T01:five_prime_UTR
GAGGAGAGTCATGTTAAAAG+AGG 0.515226 2:-2819464 MsG0280006501.01.T01:five_prime_UTR
CACTAGAGAGCAAGCAGCCA+AGG 0.516229 2:-2813838 MsG0280006501.01.T01:CDS
TCTCGAGTATTGGGCAGGCA+GGG 0.517138 2:-2816017 MsG0280006501.01.T01:CDS
TATTCTGTGTAAATATCTAA+AGG 0.522284 2:-2813068 MsG0280006501.01.T01:three_prime_UTR
AGATTTAGAGACCAATGAGT+TGG 0.523749 2:-2819399 MsG0280006501.01.T01:five_prime_UTR
AGCACCTATAGTAGAAAAGT+TGG 0.529249 2:-2819564 MsG0280006501.01.T01:five_prime_UTR
TTGAAGGGAGTCCTTTGCGT+TGG 0.532783 2:-2813894 MsG0280006501.01.T01:intron
ATAAAAGGCATTCATAGGCC+AGG 0.534215 2:+2813145 None:intergenic
GAGCTTTCCCTGGCTATAGT+GGG 0.535147 2:-2814519 MsG0280006501.01.T01:CDS
TGTTGTATGGTACGGAGTGT+TGG 0.536297 2:-2819709 MsG0280006501.01.T01:five_prime_UTR
ACCGACAATGTTGTATGGTA+CGG 0.541634 2:-2819717 None:intergenic
TGAAACATCTACAAACTATG+AGG 0.542229 2:+2816395 None:intergenic
ACACATCACCTCAAGATCCT+TGG 0.543552 2:+2813821 None:intergenic
CAGGTTCTCGAGTATTGGGC+AGG 0.543908 2:-2816022 MsG0280006501.01.T01:CDS
CGGAGATGAGGATGTTGTGT+TGG 0.544850 2:-2819649 MsG0280006501.01.T01:five_prime_UTR
GCAAGCAGCCAAGGATCTTG+AGG 0.546149 2:-2813829 MsG0280006501.01.T01:intron
GTCAGACCGACAATGTTGTA+TGG 0.551040 2:-2819722 None:intergenic
ATTGTCTAATTACTTGGTGA+AGG 0.551948 2:-2813190 MsG0280006501.01.T01:three_prime_UTR
AAAGCCTTATCCCACTAAGT+GGG 0.568517 2:+2819302 None:intergenic
TTGATTTACTCTTCTTACAA+CGG 0.571739 2:+2819490 None:intergenic
TGACACCATTAGAGAGAGAG+TGG 0.575302 2:-2819591 MsG0280006501.01.T01:five_prime_UTR
ACTATAGCCAGGGAAAGCTC+TGG 0.578804 2:+2814522 None:intergenic
TTCGCTCCCCACTATAGCCA+GGG 0.578838 2:+2814512 None:intergenic
AAGAAGAGTAAATCAAATGG+AGG 0.579017 2:-2819483 MsG0280006501.01.T01:five_prime_UTR
GTGATGACCAGAGCTTTCCC+TGG 0.579648 2:-2814529 MsG0280006501.01.T01:CDS
GCTCCCAACTCGATCAATGA+GGG 0.582512 2:-2818146 MsG0280006501.01.T01:CDS
AGGATGTTGTGTTGGATGAG+TGG 0.583163 2:-2819641 MsG0280006501.01.T01:five_prime_UTR
AAGTAAGCATAGCGGAGATG+AGG 0.583385 2:-2819661 MsG0280006501.01.T01:five_prime_UTR
GCACTACCACACGAAATTGG+AGG 0.585064 2:+2818074 None:intergenic
GTGGTAAGACTAGACATGAT+AGG 0.588491 2:-2819622 MsG0280006501.01.T01:five_prime_UTR
CTTTGTCTCTAGACAACACA+GGG 0.592839 2:+2818192 None:intergenic
AAATGGAGGAGAGTCATGTT+CGG 0.593966 2:-2819349 MsG0280006501.01.T01:five_prime_UTR
CATCTACAAACTATGAGGAA+AGG 0.595696 2:+2816400 None:intergenic
AGAGACAACTAAAGGAAACC+TGG 0.599545 2:-2813163 MsG0280006501.01.T01:three_prime_UTR
AAGGCTGAAGAGACAACTAA+AGG 0.604215 2:-2813171 MsG0280006501.01.T01:three_prime_UTR
CTTATCCCACTAAGTGGGGT+CGG 0.608874 2:+2819307 None:intergenic
GACACCATTAGAGAGAGAGT+GGG 0.610294 2:-2819590 MsG0280006501.01.T01:five_prime_UTR
GCAGAGAATAGCAGCTAAAG+CGG 0.612889 2:+2816363 None:intergenic
AATATCTAAAGGCGATATTG+GGG 0.616863 2:-2813057 MsG0280006501.01.T01:three_prime_UTR
AGCTTTCCCTGGCTATAGTG+GGG 0.618131 2:-2814518 MsG0280006501.01.T01:CDS
TCTAAAGGCGATATTGGGGA+TGG 0.622408 2:-2813053 MsG0280006501.01.T01:three_prime_UTR
TGCTCCCAACTCGATCAATG+AGG 0.629728 2:-2818147 MsG0280006501.01.T01:CDS
AGAGAGGAAGATGAAGAGAA+CGG 0.638221 2:-2816487 MsG0280006501.01.T01:CDS
AGACGTGAAGATGCCTAGAG+AGG 0.640729 2:-2816503 MsG0280006501.01.T01:CDS
ACACCATTAGAGAGAGAGTG+GGG 0.652908 2:-2819589 MsG0280006501.01.T01:five_prime_UTR
ACGAGTTCGAGCAGTAGCAC+AGG 0.654238 2:-2816445 MsG0280006501.01.T01:CDS
ATTAGGCCTCCAATTTCGTG+TGG 0.667331 2:-2818080 MsG0280006501.01.T01:CDS
AAGCCTTATCCCACTAAGTG+GGG 0.671687 2:+2819303 None:intergenic
GCTTTGTCTCTAGACAACAC+AGG 0.699941 2:+2818191 None:intergenic
GAGGAAGATGAAGAGAACGG+TGG 0.701747 2:-2816484 MsG0280006501.01.T01:CDS
CACCATTAGAGAGAGAGTGG+GGG 0.722573 2:-2819588 MsG0280006501.01.T01:five_prime_UTR
CGAGAGTAAAGTAAGCATAG+CGG 0.731239 2:-2819669 MsG0280006501.01.T01:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAATAAAAAAAAAAT+TGG + Chr2:2813874-2813893 None:intergenic 0.0%
!! GTGAAAAATAAAATATTAAA+TGG - Chr2:2813565-2813584 MsG0280006501.01.T01:intron 10.0%
!! TAATAATACAAGTTAAAAAT+TGG - Chr2:2814481-2814500 MsG0280006501.01.T01:CDS 10.0%
!!! AAATAATATATTTTAAGGAA+AGG + Chr2:2816133-2816152 None:intergenic 10.0%
!! AAACAAATTAATATCAGTAA+CGG + Chr2:2819086-2819105 None:intergenic 15.0%
!! AAATAAAAAAAAAATTGGCT+AGG + Chr2:2813869-2813888 None:intergenic 15.0%
!! AGGAGATTAAATTAAATTAA+GGG - Chr2:2817072-2817091 MsG0280006501.01.T01:intron 15.0%
!! ATTATTAGTTAAAGAAATGA+AGG - Chr2:2819197-2819216 MsG0280006501.01.T01:intron 15.0%
!! CTATCATATAGTATTATTTA+AGG + Chr2:2818029-2818048 None:intergenic 15.0%
!! TAGGAGATTAAATTAAATTA+AGG - Chr2:2817071-2817090 MsG0280006501.01.T01:intron 15.0%
!! TATATATGCATATACATATA+AGG - Chr2:2813891-2813910 MsG0280006501.01.T01:CDS 15.0%
!!! AAATCTAAAACAAAAAACAA+TGG + Chr2:2816544-2816563 None:intergenic 15.0%
!!! ATCAGTATAAAACATTATTT+TGG + Chr2:2817465-2817484 None:intergenic 15.0%
!!! CTAACTTTTATATGATATAA+AGG + Chr2:2816871-2816890 None:intergenic 15.0%
!!! TATTGATTTTTCACATTATT+GGG - Chr2:2818516-2818535 MsG0280006501.01.T01:intron 15.0%
!!! TTCATAATCATGTTTTTTAA+TGG - Chr2:2816819-2816838 MsG0280006501.01.T01:intron 15.0%
!! AATTTAGATCTGAACAAAAA+TGG - Chr2:2817556-2817575 MsG0280006501.01.T01:intron 20.0%
!! ACTCTATCAAAAATCATATT+TGG + Chr2:2813380-2813399 None:intergenic 20.0%
!! CAACAAATTAACTAAATTTG+CGG + Chr2:2819055-2819074 None:intergenic 20.0%
!! CAATAAAAACTTATCAGAAT+TGG - Chr2:2817678-2817697 MsG0280006501.01.T01:intron 20.0%
!! GAAATTGCAACAATAAAATT+TGG + Chr2:2819152-2819171 None:intergenic 20.0%
!! TAAAATATTAAATGGGACAA+AGG - Chr2:2813573-2813592 MsG0280006501.01.T01:intron 20.0%
!! TATTCTGTGTAAATATCTAA+AGG - Chr2:2819683-2819702 MsG0280006501.01.T01:five_prime_UTR 20.0%
!! TTAAATATATTTCACACTCT+TGG + Chr2:2815784-2815803 None:intergenic 20.0%
!! TTGCAAGTATTTATCAATTT+GGG + Chr2:2817338-2817357 None:intergenic 20.0%
!! TTTGAATTATTCTGATTTCA+AGG + Chr2:2815163-2815182 None:intergenic 20.0%
!! TTTGAATTTAAGCAACTTTA+GGG - Chr2:2814319-2814338 MsG0280006501.01.T01:intron 20.0%
!!! ACGTTTTTTTTTTCTTTGTA+CGG - Chr2:2817750-2817769 MsG0280006501.01.T01:intron 20.0%
!!! ATTAATTTTCTTGCATTTTC+AGG - Chr2:2816710-2816729 MsG0280006501.01.T01:intron 20.0%
!!! ATTCTACAATTGGTTTTTTA+GGG - Chr2:2814227-2814246 MsG0280006501.01.T01:intron 20.0%
!!! ATTTCTAAAGTATTAAAGTG+AGG + Chr2:2818555-2818574 None:intergenic 20.0%
!!! CTATTGATTTTTCACATTAT+TGG - Chr2:2818515-2818534 MsG0280006501.01.T01:intron 20.0%
!!! CTATTTTAAAATATGAGACA+TGG + Chr2:2816003-2816022 None:intergenic 20.0%
!!! GATTTTTTGTTTTGTTTTGA+GGG + Chr2:2816919-2816938 None:intergenic 20.0%
!!! TCATATTTTGACTAACATTT+TGG + Chr2:2818428-2818447 None:intergenic 20.0%
!!! TGATTTTTTGTTTTGTTTTG+AGG + Chr2:2816920-2816939 None:intergenic 20.0%
!!! TTTAATGTTTTTCATCCAAA+GGG - Chr2:2815109-2815128 MsG0280006501.01.T01:intron 20.0%
!!! TTTCTAGTATTATCAAACAA+GGG + Chr2:2818405-2818424 None:intergenic 20.0%
!!! TTTTTGTTTTAGATTTTCGA+TGG - Chr2:2816548-2816567 MsG0280006501.01.T01:intron 20.0%
! AAAAAAAACTTCCTTAGACA+AGG + Chr2:2817313-2817332 None:intergenic 25.0%
! AAATATCTAAAGGCGATATT+GGG - Chr2:2819693-2819712 MsG0280006501.01.T01:five_prime_UTR 25.0%
! AACAGGTAATTGAGTTAAAA+AGG - Chr2:2817851-2817870 MsG0280006501.01.T01:intron 25.0%
! AACTTAAGTTATACTCTGAT+TGG + Chr2:2815209-2815228 None:intergenic 25.0%
! AAGAAAGAATCATGCTTTAT+AGG - Chr2:2815501-2815520 MsG0280006501.01.T01:intron 25.0%
! AATCGAAACAACAAAACAAT+AGG + Chr2:2817174-2817193 None:intergenic 25.0%
! AATTGGAGATTATGATACTT+AGG - Chr2:2817052-2817071 MsG0280006501.01.T01:intron 25.0%
! ACAATTTACTCCTATGATTT+AGG + Chr2:2814981-2815000 None:intergenic 25.0%
! AGAATTGTGAATTGAGAATT+GGG - Chr2:2814254-2814273 MsG0280006501.01.T01:intron 25.0%
! AGAGAATATTGTATTCGAAT+GGG + Chr2:2815866-2815885 None:intergenic 25.0%
! ATAAGAGCAAAGAAGAAAAA+TGG + Chr2:2818595-2818614 None:intergenic 25.0%
! ATAGCAATAATCATATGGTA+TGG + Chr2:2819239-2819258 None:intergenic 25.0%
! ATATAATCAGATCATGTAGT+TGG + Chr2:2819113-2819132 None:intergenic 25.0%
! ATTGATTATTTCACTTACCT+TGG + Chr2:2814186-2814205 None:intergenic 25.0%
! CAAAGAAAAAAAAAACGTGT+TGG + Chr2:2817748-2817767 None:intergenic 25.0%
! CAATTTACTCCTATGATTTA+GGG + Chr2:2814980-2814999 None:intergenic 25.0%
! CAATTTATTCCTTCATTCAT+CGG - Chr2:2816503-2816522 MsG0280006501.01.T01:CDS 25.0%
! CTATGTTTCTTTCTATCTTT+CGG + Chr2:2816177-2816196 None:intergenic 25.0%
! GACCAAAAAAAAAATTGACT+TGG - Chr2:2817800-2817819 MsG0280006501.01.T01:intron 25.0%
! GTCAAAATGTAAAAATCTCA+CGG - Chr2:2815309-2815328 MsG0280006501.01.T01:intron 25.0%
! GTTGCAAGTATTTATCAATT+TGG + Chr2:2817339-2817358 None:intergenic 25.0%
! GTTTGAATTTAAGCAACTTT+AGG - Chr2:2814318-2814337 MsG0280006501.01.T01:intron 25.0%
! TAAATATCTAAAGGCGATAT+TGG - Chr2:2819692-2819711 MsG0280006501.01.T01:five_prime_UTR 25.0%
! TAAGCAAAAACAAAAGAAGA+TGG + Chr2:2815433-2815452 None:intergenic 25.0%
! TACAGATAGCAATAATCATA+TGG + Chr2:2819244-2819263 None:intergenic 25.0%
! TAGAATAAACTTTGACACTT+AGG + Chr2:2819391-2819410 None:intergenic 25.0%
! TAGAATTGTGAATTGAGAAT+TGG - Chr2:2814253-2814272 MsG0280006501.01.T01:intron 25.0%
! TAGCAATAATCATATGGTAT+GGG + Chr2:2819238-2819257 None:intergenic 25.0%
! TATAAACTTGAGAAATGCTA+GGG - Chr2:2817100-2817119 MsG0280006501.01.T01:intron 25.0%
! TCAGAGTATAACTTAAGTTA+AGG - Chr2:2815210-2815229 MsG0280006501.01.T01:intron 25.0%
! TGATTATAAATTGCTGGAAA+CGG - Chr2:2814640-2814659 MsG0280006501.01.T01:intron 25.0%
! TGCAATTTCAAATCAAATGT+TGG - Chr2:2819163-2819182 MsG0280006501.01.T01:intron 25.0%
! TGTAAATTATGATCGTATCT+TGG + Chr2:2813706-2813725 None:intergenic 25.0%
! TGTAAGAAGAGTAAATCAAA+TGG - Chr2:2813265-2813284 MsG0280006501.01.T01:CDS 25.0%
! TTATAAACTTGAGAAATGCT+AGG - Chr2:2817099-2817118 MsG0280006501.01.T01:intron 25.0%
! TTGATTTACTCTTCTTACAA+CGG + Chr2:2813264-2813283 None:intergenic 25.0%
! TTGTTACATGTAATTGTGTT+TGG - Chr2:2816794-2816813 MsG0280006501.01.T01:intron 25.0%
! TTTCCTTCATTTCATTTCTT+AGG - Chr2:2816665-2816684 MsG0280006501.01.T01:intron 25.0%
! TTTCTCTTTCATTCTACAAT+TGG - Chr2:2814217-2814236 MsG0280006501.01.T01:intron 25.0%
!! ACTTCTCAATCGTATATTTT+TGG + Chr2:2817400-2817419 None:intergenic 25.0%
!! AGTTGTTGATTATAAATTGC+TGG - Chr2:2814634-2814653 MsG0280006501.01.T01:intron 25.0%
!! ATTGAGAATTGGGTATTTTT+AGG - Chr2:2814264-2814283 MsG0280006501.01.T01:intron 25.0%
!! ATTGTTTTCCTTCTATTTGA+CGG - Chr2:2814996-2815015 MsG0280006501.01.T01:intron 25.0%
!! CTTCTCAATCGTATATTTTT+GGG + Chr2:2817399-2817418 None:intergenic 25.0%
!! CTTTAATGTTTTTCATCCAA+AGG - Chr2:2815108-2815127 MsG0280006501.01.T01:intron 25.0%
!! GATTTTTGATAGAGTGAAAA+TGG - Chr2:2813385-2813404 MsG0280006501.01.T01:intron 25.0%
!! GTTTCTCTAATAGTTTTCTT+AGG + Chr2:2813323-2813342 None:intergenic 25.0%
!! TATTATCAAACAAGGGTTTT+GGG + Chr2:2818398-2818417 None:intergenic 25.0%
!!! AGACACTCTTTATTTTTTGA+AGG - Chr2:2815951-2815970 MsG0280006501.01.T01:intron 25.0%
!!! ATTTTTTTTAGGGAGTATAG+TGG + Chr2:2813495-2813514 None:intergenic 25.0%
!!! CACCAAGTCAATTTTTTTTT+TGG + Chr2:2817805-2817824 None:intergenic 25.0%
!!! CATTCTACAATTGGTTTTTT+AGG - Chr2:2814226-2814245 MsG0280006501.01.T01:intron 25.0%
!!! CGGATTTCTTTTTTTTTTAG+AGG - Chr2:2817770-2817789 MsG0280006501.01.T01:intron 25.0%
!!! CTTCATAATTAAGTTTTGTC+AGG - Chr2:2816634-2816653 MsG0280006501.01.T01:intron 25.0%
!!! GTTTCTAGTATTATCAAACA+AGG + Chr2:2818406-2818425 None:intergenic 25.0%
!!! TACAGTATTTGTGTTTTTGA+AGG + Chr2:2816445-2816464 None:intergenic 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG - Chr2:2813198-2813217 MsG0280006501.01.T01:three_prime_UTR 25.0%
!!! TGTTAAAAGAGAGTGTTAAT+GGG - Chr2:2817903-2817922 MsG0280006501.01.T01:intron 25.0%
!!! TTCTCAATCGTATATTTTTG+GGG + Chr2:2817398-2817417 None:intergenic 25.0%
!!! TTGAGAATTGGGTATTTTTA+GGG - Chr2:2814265-2814284 MsG0280006501.01.T01:intron 25.0%
!!! TTTGTTTGTTGTGAGAATAA+AGG + Chr2:2814057-2814076 None:intergenic 25.0%
!!! TTTTGTACAATGCTGTTTAT+AGG - Chr2:2814522-2814541 MsG0280006501.01.T01:CDS 25.0%
AAAAAAAATTGGCTAGGATC+TGG + Chr2:2813863-2813882 None:intergenic 30.0%
AAAGTGTACAAACTCTAAAC+AGG + Chr2:2819326-2819345 None:intergenic 30.0%
AAATATTATTCATCGTCGAG+AGG + Chr2:2814858-2814877 None:intergenic 30.0%
AAGAAGAGTAAATCAAATGG+AGG - Chr2:2813268-2813287 MsG0280006501.01.T01:CDS 30.0%
AAGAAGATGGAAGAAAGAAA+AGG + Chr2:2815420-2815439 None:intergenic 30.0%
AATATCTAAAGGCGATATTG+GGG - Chr2:2819694-2819713 MsG0280006501.01.T01:five_prime_UTR 30.0%
AATATTATTCATCGTCGAGA+GGG + Chr2:2814857-2814876 None:intergenic 30.0%
AATGAATCTCTATATGCTCT+AGG - Chr2:2813529-2813548 MsG0280006501.01.T01:intron 30.0%
AATTGCGAAAAGAAGAAAGA+AGG + Chr2:2816488-2816507 None:intergenic 30.0%
AGCAAAATAAACACAAGGTT+TGG + Chr2:2814424-2814443 None:intergenic 30.0%
AGGTAATTGAGTTAAAAAGG+TGG - Chr2:2817854-2817873 MsG0280006501.01.T01:intron 30.0%
AGTGACAAACATCACTTAAA+AGG + Chr2:2815897-2815916 None:intergenic 30.0%
ATATCCTTTATCAGGAGAAA+AGG + Chr2:2815238-2815257 None:intergenic 30.0%
ATGAATCTCTATATGCTCTA+GGG - Chr2:2813530-2813549 MsG0280006501.01.T01:intron 30.0%
ATGCAATGAAGAGATTCTTT+AGG + Chr2:2818798-2818817 None:intergenic 30.0%
CCAACAACACACTTAAATAA+AGG - Chr2:2815673-2815692 MsG0280006501.01.T01:intron 30.0%
GAGAATATTGTATTCGAATG+GGG + Chr2:2815865-2815884 None:intergenic 30.0%
GAGAGAATATTGTATTCGAA+TGG + Chr2:2815867-2815886 None:intergenic 30.0%
GATCCTAAGAAATGAAATGA+AGG + Chr2:2816671-2816690 None:intergenic 30.0%
GATCTAGACCTTTCATATTA+GGG + Chr2:2814948-2814967 None:intergenic 30.0%
GCTGAAATTGTCTAATTACT+TGG - Chr2:2819555-2819574 MsG0280006501.01.T01:five_prime_UTR 30.0%
GGTAATTGAGTTAAAAAGGT+GGG - Chr2:2817855-2817874 MsG0280006501.01.T01:intron 30.0%
GTAACCAACACTAACATAAA+AGG + Chr2:2819624-2819643 None:intergenic 30.0%
TAACTCAATTACCTGTTTAC+CGG + Chr2:2817848-2817867 None:intergenic 30.0%
TACTGATACACTAGATTTGA+AGG + Chr2:2814136-2814155 None:intergenic 30.0%
TAGAGAATGAACAAACGATA+TGG + Chr2:2819646-2819665 None:intergenic 30.0%
TAGGGTTTGAATTGAGAATT+GGG - Chr2:2814283-2814302 MsG0280006501.01.T01:intron 30.0%
TAGTTAAAGAAATGAAGGCT+AGG - Chr2:2819202-2819221 MsG0280006501.01.T01:intron 30.0%
TATCCTTTATCAGGAGAAAA+GGG + Chr2:2815237-2815256 None:intergenic 30.0%
TCAAACAAAGCCATAAAACT+CGG + Chr2:2814451-2814470 None:intergenic 30.0%
TGAAACATCTACAAACTATG+AGG + Chr2:2816359-2816378 None:intergenic 30.0%
TTAACACACCCAATAACAAT+TGG + Chr2:2817889-2817908 None:intergenic 30.0%
TTAGGGTTTGAATTGAGAAT+TGG - Chr2:2814282-2814301 MsG0280006501.01.T01:intron 30.0%
TTATTCGCATATCCTTTATC+AGG + Chr2:2815246-2815265 None:intergenic 30.0%
! AAATTTGGAGCAAGGAAATA+TGG + Chr2:2819137-2819156 None:intergenic 30.0%
! AATGCCTTTTATGTTAGTGT+TGG - Chr2:2819617-2819636 MsG0280006501.01.T01:five_prime_UTR 30.0%
! AATTTGGAGCAAGGAAATAT+GGG + Chr2:2819136-2819155 None:intergenic 30.0%
! AGCTCTTATTTGATATACCT+TGG - Chr2:2818690-2818709 MsG0280006501.01.T01:intron 30.0%
! ATTGTCTAATTACTTGGTGA+AGG - Chr2:2819561-2819580 MsG0280006501.01.T01:five_prime_UTR 30.0%
! CAACAATAAAATTTGGAGCA+AGG + Chr2:2819145-2819164 None:intergenic 30.0%
! CCTTTATTTAAGTGTGTTGT+TGG + Chr2:2815676-2815695 None:intergenic 30.0%
! GCTCTTATTTGATATACCTT+GGG - Chr2:2818691-2818710 MsG0280006501.01.T01:intron 30.0%
! GTAAGTGAGAGTGATATTTT+AGG + Chr2:2816954-2816973 None:intergenic 30.0%
! GTATTATCAAACAAGGGTTT+TGG + Chr2:2818399-2818418 None:intergenic 30.0%
! GTGTTTTCAACTCGAAATTT+AGG - Chr2:2817956-2817975 MsG0280006501.01.T01:intron 30.0%
! TAAAGGTTAGAGATCTCTTT+TGG - Chr2:2815690-2815709 MsG0280006501.01.T01:intron 30.0%
! TCTACCAACTTTTCTACTAT+AGG + Chr2:2813194-2813213 None:intergenic 30.0%
! TGAAATTTTCAAAGCGAATC+TGG + Chr2:2818628-2818647 None:intergenic 30.0%
! TTAGTGCAATGTTTTGTCAT+TGG + Chr2:2819032-2819051 None:intergenic 30.0%
! TTTCTTTTCTCTAACACTCA+CGG + Chr2:2816071-2816090 None:intergenic 30.0%
! TTTGAAACAATGTGTGAACA+TGG - Chr2:2819264-2819283 MsG0280006501.01.T01:intron 30.0%
! TTTTGATAGAGTGAAAATGG+AGG - Chr2:2813388-2813407 MsG0280006501.01.T01:intron 30.0%
!! CTAACATAAAAGGCATTCAT+AGG + Chr2:2819614-2819633 None:intergenic 30.0%
!! GATTCTTTAGGACATAATTG+AGG + Chr2:2818786-2818805 None:intergenic 30.0%
!! GCTACTGTTTTAGATTTCAA+TGG + Chr2:2817443-2817462 None:intergenic 30.0%
!! GTGTTAAAAGAGAGTGTTAA+TGG - Chr2:2817902-2817921 MsG0280006501.01.T01:intron 30.0%
!!! ACGTTTTGTTTGGTTTGTAT+TGG + Chr2:2813950-2813969 None:intergenic 30.0%
!!! ATCTCTTTTGGTTTAACAGA+AGG - Chr2:2815702-2815721 MsG0280006501.01.T01:intron 30.0%
!!! CGTTTTGTTTGGTTTGTATT+GGG + Chr2:2813949-2813968 None:intergenic 30.0%
!!! GAGAATTGGGGTTTTTTTTA+GGG - Chr2:2814296-2814315 MsG0280006501.01.T01:intron 30.0%
!!! GTTTTGTTTCTTACTGAGTT+TGG - Chr2:2818176-2818195 MsG0280006501.01.T01:CDS 30.0%
!!! TCTCAATCGTATATTTTTGG+GGG + Chr2:2817397-2817416 None:intergenic 30.0%
!!! TGAGAATTGGGGTTTTTTTT+AGG - Chr2:2814295-2814314 MsG0280006501.01.T01:intron 30.0%
!!! TTTTGTTTTGTTTTGAGGGA+AGG + Chr2:2816915-2816934 None:intergenic 30.0%
AAAGTCACAGATGACAATAG+TGG - Chr2:2815340-2815359 MsG0280006501.01.T01:intron 35.0%
AAGGAAAGACTACATATGTG+TGG + Chr2:2818010-2818029 None:intergenic 35.0%
ACAGTCACCAACAACAAAAA+AGG + Chr2:2818756-2818775 None:intergenic 35.0%
AGACTAGACATGATAGGATT+AGG - Chr2:2813135-2813154 MsG0280006501.01.T01:three_prime_UTR 35.0%
AGATTTAGAGACCAATGAGT+TGG - Chr2:2813352-2813371 MsG0280006501.01.T01:intron 35.0%
AGCACCTATAGTAGAAAAGT+TGG - Chr2:2813187-2813206 MsG0280006501.01.T01:three_prime_UTR 35.0%
AGCATGATTCTTTCTTCAAC+TGG + Chr2:2815497-2815516 None:intergenic 35.0%
AGCTAAAAGTGACCGTATAT+AGG + Chr2:2814793-2814812 None:intergenic 35.0%
AGGGTTTGAATTGAGAATTG+GGG - Chr2:2814284-2814303 MsG0280006501.01.T01:intron 35.0%
AGTCATGTTAAAAGAGGTAG+AGG - Chr2:2813293-2813312 MsG0280006501.01.T01:intron 35.0%
ATATTAAATGGGACAAAGGC+AGG - Chr2:2813577-2813596 MsG0280006501.01.T01:intron 35.0%
ATCCTTTATCAGGAGAAAAG+GGG + Chr2:2815236-2815255 None:intergenic 35.0%
ATCGTATCTTGGATGTAATG+CGG + Chr2:2813695-2813714 None:intergenic 35.0%
ATTGTTTGAGAGTAGAGAAG+AGG + Chr2:2813980-2813999 None:intergenic 35.0%
CACAAAAATCGCAATGAGAA+CGG + Chr2:2816591-2816610 None:intergenic 35.0%
CATATTTGGATCCAACTCAT+TGG + Chr2:2813366-2813385 None:intergenic 35.0%
CATCTACAAACTATGAGGAA+AGG + Chr2:2816354-2816373 None:intergenic 35.0%
CTTCTCTACTCTCAAACAAT+CGG - Chr2:2813980-2813999 MsG0280006501.01.T01:intron 35.0%
GAAAACAAGTTAGATCTGGA+AGG + Chr2:2817375-2817394 None:intergenic 35.0%
GAAAATAGGCTTAGATGGTT+TGG - Chr2:2813212-2813231 MsG0280006501.01.T01:three_prime_UTR 35.0%
GAACTATAGACATGCACATA+TGG + Chr2:2818993-2819012 None:intergenic 35.0%
GCAGTAGCAAAATAAACACA+AGG + Chr2:2814429-2814448 None:intergenic 35.0%
GGATCTAGACCTTTCATATT+AGG + Chr2:2814949-2814968 None:intergenic 35.0%
GTGCTAAAATCATACCAAAC+AGG - Chr2:2814386-2814405 MsG0280006501.01.T01:intron 35.0%
GTTAAATGCAGAGACAGTAA+TGG + Chr2:2817274-2817293 None:intergenic 35.0%
TAAAAGTGACCGTATATAGG+CGG + Chr2:2814790-2814809 None:intergenic 35.0%
TAAAGTGAGGACAACATTCA+AGG + Chr2:2818542-2818561 None:intergenic 35.0%
TAATGGTGAAAGGTTGAGTT+GGG + Chr2:2817257-2817276 None:intergenic 35.0%
TACTTGCTTCTATGAACACT+TGG - Chr2:2819456-2819475 MsG0280006501.01.T01:five_prime_UTR 35.0%
TAGGACATAATTGAGGAGTA+AGG + Chr2:2818779-2818798 None:intergenic 35.0%
TATACATATAAGGCACGTGA+AGG - Chr2:2813901-2813920 MsG0280006501.01.T01:intron 35.0%
TGAATCTCTATATGCTCTAG+GGG - Chr2:2813531-2813550 MsG0280006501.01.T01:intron 35.0%
TGGTAGAAAATAGGCTTAGA+TGG - Chr2:2813207-2813226 MsG0280006501.01.T01:three_prime_UTR 35.0%
TTCCATCTGTGTATGTATGT+CGG + Chr2:2815544-2815563 None:intergenic 35.0%
! AAATGAAGGCTAGGATTTTG+GGG - Chr2:2819211-2819230 MsG0280006501.01.T01:intron 35.0%
! ACACATGGCCAATTGTTATT+GGG - Chr2:2817878-2817897 MsG0280006501.01.T01:intron 35.0%
! AGAAATGAAGGCTAGGATTT+TGG - Chr2:2819209-2819228 MsG0280006501.01.T01:intron 35.0%
! AGGAGCATAATTGTAACTTG+AGG + Chr2:2813656-2813675 None:intergenic 35.0%
! ATGTAACTTGTGACTTTGCA+AGG + Chr2:2816988-2817007 None:intergenic 35.0%
! ATGTTTTGTCATTGGAACCA+AGG + Chr2:2819024-2819043 None:intergenic 35.0%
! CTTTCAACTGATTTCGATGT+CGG + Chr2:2815022-2815041 None:intergenic 35.0%
! GAAATGAAGGCTAGGATTTT+GGG - Chr2:2819210-2819229 MsG0280006501.01.T01:intron 35.0%
! GGTCTCTAAATCTTTTCGAA+TGG + Chr2:2813345-2813364 None:intergenic 35.0%
! GTTTCTTTTGCTACTACTGT+CGG - Chr2:2814364-2814383 MsG0280006501.01.T01:intron 35.0%
! TGCTATTTGCTTCTTTCTTG+TGG - Chr2:2818291-2818310 MsG0280006501.01.T01:intron 35.0%
! TGTTTGTATTGCCGTTTGAA+GGG - Chr2:2818842-2818861 MsG0280006501.01.T01:intron 35.0%
! TGTTTTGTCATTGGAACCAA+GGG + Chr2:2819023-2819042 None:intergenic 35.0%
! TTGTTTGTATTGCCGTTTGA+AGG - Chr2:2818841-2818860 MsG0280006501.01.T01:intron 35.0%
! TTTAAGTGTGTTGTTGGTCA+TGG + Chr2:2815670-2815689 None:intergenic 35.0%
! TTTTGCCACCCTAATATGAA+AGG - Chr2:2814937-2814956 MsG0280006501.01.T01:intron 35.0%
!! AGGAGAAAACACGTTTTGTT+TGG + Chr2:2813960-2813979 None:intergenic 35.0%
!! CTTCTAAAGTGAATCCTAGT+GGG + Chr2:2817131-2817150 None:intergenic 35.0%
!! GGTTTTTCTTTTTTGCAGTG+CGG - Chr2:2818197-2818216 MsG0280006501.01.T01:CDS 35.0%
!! TCTTCTAAAGTGAATCCTAG+TGG + Chr2:2817132-2817151 None:intergenic 35.0%
!!! ATTTTCAGGTTCTCGAGTAT+TGG - Chr2:2816724-2816743 MsG0280006501.01.T01:intron 35.0%
!!! GTTTTAGAAAACCAACGCAA+AGG + Chr2:2818871-2818890 None:intergenic 35.0%
!!! TTCCTCACCTTTTTTGTTGT+TGG - Chr2:2818746-2818765 MsG0280006501.01.T01:intron 35.0%
!!! TTTTCAGGTTCTCGAGTATT+GGG - Chr2:2816725-2816744 MsG0280006501.01.T01:intron 35.0%
AAACACGAACCTAGAACGTT+TGG - Chr2:2818085-2818104 MsG0280006501.01.T01:CDS 40.0%
AAATGGAGGAGAGTCATGTT+CGG - Chr2:2813282-2813301 MsG0280006501.01.T01:intron 40.0%
AACACGAACCTAGAACGTTT+GGG - Chr2:2818086-2818105 MsG0280006501.01.T01:CDS 40.0%
AACAGCAGAGAGAACGTTAA+CGG + Chr2:2816418-2816437 None:intergenic 40.0%
AAGGCTGAAGAGACAACTAA+AGG - Chr2:2819580-2819599 MsG0280006501.01.T01:five_prime_UTR 40.0%
ACCTATAGTGAAACATGGTG+TGG - Chr2:2813826-2813845 MsG0280006501.01.T01:intron 40.0%
AGAGACAACTAAAGGAAACC+TGG - Chr2:2819588-2819607 MsG0280006501.01.T01:five_prime_UTR 40.0%
AGAGAGGAAGATGAAGAGAA+CGG - Chr2:2816264-2816283 MsG0280006501.01.T01:intron 40.0%
AGCGAATACATAAACGAGGA+TGG + Chr2:2819368-2819387 None:intergenic 40.0%
AGTGAGAGTGAGAGGTAAAA+GGG + Chr2:2815054-2815073 None:intergenic 40.0%
AGTTAAAAAGGTGGGACACA+TGG - Chr2:2817863-2817882 MsG0280006501.01.T01:intron 40.0%
CACCAACAACAAAAAAGGTG+AGG + Chr2:2818751-2818770 None:intergenic 40.0%
CAGATGACAATAGTGGTATG+TGG - Chr2:2815347-2815366 MsG0280006501.01.T01:intron 40.0%
CATGTATGACGCATGTATCT+CGG + Chr2:2815394-2815413 None:intergenic 40.0%
CGAGAGTAAAGTAAGCATAG+CGG - Chr2:2813082-2813101 MsG0280006501.01.T01:three_prime_UTR 40.0%
CTAGACCTTTCATATTAGGG+TGG + Chr2:2814945-2814964 None:intergenic 40.0%
CTTACTTACTTCCATTTCCC+TGG - Chr2:2815458-2815477 MsG0280006501.01.T01:intron 40.0%
CTTTGTCTCTAGACAACACA+GGG + Chr2:2814562-2814581 None:intergenic 40.0%
GACACATGGCCAATTGTTAT+TGG - Chr2:2817877-2817896 MsG0280006501.01.T01:intron 40.0%
GAGGAGAGTCATGTTAAAAG+AGG - Chr2:2813287-2813306 MsG0280006501.01.T01:intron 40.0%
GGCAAATTCAACCTTGTCTA+AGG - Chr2:2817299-2817318 MsG0280006501.01.T01:intron 40.0%
GTAATGGTGAAAGGTTGAGT+TGG + Chr2:2817258-2817277 None:intergenic 40.0%
GTGGTAAGACTAGACATGAT+AGG - Chr2:2813129-2813148 MsG0280006501.01.T01:three_prime_UTR 40.0%
TACCGACATACATACACAGA+TGG - Chr2:2815539-2815558 MsG0280006501.01.T01:intron 40.0%
TAGGAGCGAATACATAAACG+AGG + Chr2:2819372-2819391 None:intergenic 40.0%
TGATTCTTTCTTCAACTGGC+TGG + Chr2:2815493-2815512 None:intergenic 40.0%
TGCTTACTTTACTCTCGTGT+TGG + Chr2:2813079-2813098 None:intergenic 40.0%
TGGCGTAGTTTACGTTATCT+TGG - Chr2:2818311-2818330 MsG0280006501.01.T01:intron 40.0%
TGTCTCTGCATTTAACGTTC+TGG - Chr2:2817278-2817297 MsG0280006501.01.T01:intron 40.0%
TGTTTCTCAACCTGTAGAAC+CGG - Chr2:2817826-2817845 MsG0280006501.01.T01:intron 40.0%
TTAAGTGTGCCGCCTATATA+CGG - Chr2:2814778-2814797 MsG0280006501.01.T01:intron 40.0%
TTCTCTTCATCTTCCTCTCT+AGG + Chr2:2816264-2816283 None:intergenic 40.0%
TTGGGTGTAATGCAGAGAAT+TGG - Chr2:2818104-2818123 MsG0280006501.01.T01:CDS 40.0%
! AAAGCCTTATCCCACTAAGT+GGG + Chr2:2813452-2813471 None:intergenic 40.0%
! ACTCCTATGATTTAGGGTCA+GGG + Chr2:2814974-2814993 None:intergenic 40.0%
! ACTTTGCATTTTCACCGCAT+TGG - Chr2:2813739-2813758 MsG0280006501.01.T01:intron 40.0%
! AGAAGCAGATTTGAAGCTGA+AGG - Chr2:2817717-2817736 MsG0280006501.01.T01:intron 40.0%
! ATCTGGAAGGTTTTCTGCAA+AGG + Chr2:2817362-2817381 None:intergenic 40.0%
! CAAAGCTAGTTCTTCGACTA+CGG - Chr2:2814577-2814596 MsG0280006501.01.T01:intron 40.0%
! CGTTCTCATTGCGATTTTTG+TGG - Chr2:2816589-2816608 MsG0280006501.01.T01:intron 40.0%
! GGTGAACTTTTCTTCCTGTT+TGG + Chr2:2814403-2814422 None:intergenic 40.0%
! TACTCCTATGATTTAGGGTC+AGG + Chr2:2814975-2814994 None:intergenic 40.0%
! TCTGGAAGGTTTTCTGCAAA+GGG + Chr2:2817361-2817380 None:intergenic 40.0%
! TTTGCTACTGCCGAGTTTTA+TGG - Chr2:2814438-2814457 MsG0280006501.01.T01:intron 40.0%
!! ATAAAAGGCATTCATAGGCC+AGG + Chr2:2819609-2819628 None:intergenic 40.0%
!! ATGTTTTGAACTCAGACCCA+AGG + Chr2:2818710-2818729 None:intergenic 40.0%
AAATTGCTGGAAACGGATCC+AGG - Chr2:2814647-2814666 MsG0280006501.01.T01:intron 45.0%
AAATTGGCTAGGATCTGGTG+TGG + Chr2:2813858-2813877 None:intergenic 45.0%
AACACCCTCATTGATCGAGT+TGG + Chr2:2814612-2814631 None:intergenic 45.0%
AACCTGTAGAACCGGTAAAC+AGG - Chr2:2817834-2817853 MsG0280006501.01.T01:intron 45.0%
ACACATCACCTCAAGATCCT+TGG + Chr2:2818933-2818952 None:intergenic 45.0%
ACACCATTAGAGAGAGAGTG+GGG - Chr2:2813162-2813181 MsG0280006501.01.T01:three_prime_UTR 45.0%
ACACCCTCATTGATCGAGTT+GGG + Chr2:2814611-2814630 None:intergenic 45.0%
AGAGTGAGAGGTAAAAGGGA+GGG + Chr2:2815050-2815069 None:intergenic 45.0%
AGGATGTTGTGTTGGATGAG+TGG - Chr2:2813110-2813129 MsG0280006501.01.T01:three_prime_UTR 45.0%
ATCGGTGAAAATGCTCGTGA+AGG + Chr2:2813771-2813790 None:intergenic 45.0%
ATTAGGCCTCCAATTTCGTG+TGG - Chr2:2814671-2814690 MsG0280006501.01.T01:intron 45.0%
CACTTAGTGGGATAAGGCTT+TGG - Chr2:2813451-2813470 MsG0280006501.01.T01:intron 45.0%
CCTCGCGAGAAAGACAATAA+AGG - Chr2:2817652-2817671 MsG0280006501.01.T01:intron 45.0%
CCTTTATTGTCTTTCTCGCG+AGG + Chr2:2817655-2817674 None:intergenic 45.0%
CGTGAAGGTGATTTCCAATG+CGG + Chr2:2813756-2813775 None:intergenic 45.0%
CTATAGTTCTCTGTCTCCCT+TGG - Chr2:2819004-2819023 MsG0280006501.01.T01:intron 45.0%
CTCACTCTAACTCTAAGCCA+AGG - Chr2:2814166-2814185 MsG0280006501.01.T01:intron 45.0%
CTCTAGTGATCTCTTGCTTC+TGG + Chr2:2818901-2818920 None:intergenic 45.0%
GAAATTGGAGGCCTAATTCC+TGG + Chr2:2814668-2814687 None:intergenic 45.0%
GACACCATTAGAGAGAGAGT+GGG - Chr2:2813161-2813180 MsG0280006501.01.T01:three_prime_UTR 45.0%
GAGTGAGAGTGAGAGGTAAA+AGG + Chr2:2815055-2815074 None:intergenic 45.0%
GATGAGAGTGGAAGAAGAAG+AGG + Chr2:2814084-2814103 None:intergenic 45.0%
GCAGAGAATAGCAGCTAAAG+CGG + Chr2:2816391-2816410 None:intergenic 45.0%
GCAGAGACAGTAATGGTGAA+AGG + Chr2:2817267-2817286 None:intergenic 45.0%
GCATTACACCCAAACGTTCT+AGG + Chr2:2818097-2818116 None:intergenic 45.0%
GCCACACCATGTTTCACTAT+AGG + Chr2:2813830-2813849 None:intergenic 45.0%
GCGATGATTCCGATGAATGA+AGG + Chr2:2816515-2816534 None:intergenic 45.0%
GCTTTGTCTCTAGACAACAC+AGG + Chr2:2814563-2814582 None:intergenic 45.0%
GGACCAGGTAGATGAGTAAT+CGG + Chr2:2813789-2813808 None:intergenic 45.0%
GGGGGAAAACAAGTTAGATC+TGG + Chr2:2817379-2817398 None:intergenic 45.0%
TATAGGTCCGCCCATGTTTA+GGG + Chr2:2813813-2813832 None:intergenic 45.0%
TATGAACACTTGGCAGGAGT+TGG - Chr2:2819466-2819485 MsG0280006501.01.T01:five_prime_UTR 45.0%
TATTGTCTTTCTCGCGAGGT+TGG + Chr2:2817651-2817670 None:intergenic 45.0%
TCTAAAGGCGATATTGGGGA+TGG - Chr2:2819698-2819717 MsG0280006501.01.T01:five_prime_UTR 45.0%
TGACACCATTAGAGAGAGAG+TGG - Chr2:2813160-2813179 MsG0280006501.01.T01:three_prime_UTR 45.0%
TGCTTCTATGAACACTTGGC+AGG - Chr2:2819460-2819479 MsG0280006501.01.T01:five_prime_UTR 45.0%
TGGAAACGGATCCAGGAATT+AGG - Chr2:2814654-2814673 MsG0280006501.01.T01:intron 45.0%
TGGTTCTCGTTGAGACTGAA+TGG - Chr2:2816609-2816628 MsG0280006501.01.T01:intron 45.0%
TGTTGTATGGTACGGAGTGT+TGG - Chr2:2813042-2813061 MsG0280006501.01.T01:three_prime_UTR 45.0%
TTCATCCAAAGGGACACACT+CGG - Chr2:2815119-2815138 MsG0280006501.01.T01:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + Chr2:2813451-2813470 None:intergenic 45.0%
! AAGTAAGCATAGCGGAGATG+AGG - Chr2:2813090-2813109 MsG0280006501.01.T01:three_prime_UTR 45.0%
! CAAAGCCTTATCCCACTAAG+TGG + Chr2:2813453-2813472 None:intergenic 45.0%
! CTCCTATGATTTAGGGTCAG+GGG + Chr2:2814973-2814992 None:intergenic 45.0%
! GTTGTATGGTACGGAGTGTT+GGG - Chr2:2813043-2813062 MsG0280006501.01.T01:three_prime_UTR 45.0%
! TCACCGATTACTCATCTACC+TGG - Chr2:2813783-2813802 MsG0280006501.01.T01:intron 45.0%
! TCCATCTCACGCTCTTTTAG+CGG + Chr2:2817622-2817641 None:intergenic 45.0%
!! ATCTGGATGCTTGTTTTCGC+TGG + Chr2:2817585-2817604 None:intergenic 45.0%
!! CGGTGTCGATTTGTATCATC+TGG + Chr2:2817602-2817621 None:intergenic 45.0%
!! TACCTGTTTACCGGTTCTAC+AGG + Chr2:2817839-2817858 None:intergenic 45.0%
!! TCTGGATGCTTGTTTTCGCT+GGG + Chr2:2817584-2817603 None:intergenic 45.0%
!! TGAAAAATAAAATATTAAAT+GGG - Chr2:2813566-2813585 MsG0280006501.01.T01:intron 5.0%
!!! CTTATAAATAATATATTTTA+AGG + Chr2:2816138-2816157 None:intergenic 5.0%
!!! TAATATATAACATTTTTTTA+CGG + Chr2:2814882-2814901 None:intergenic 5.0%
!!! TAATTTTAACATTTTTTTTA+GGG + Chr2:2813505-2813524 None:intergenic 5.0%
!!! TTAATTTTAACATTTTTTTT+AGG + Chr2:2813506-2813525 None:intergenic 5.0%
ACCTGGTCCACCCTAAACAT+GGG - Chr2:2813800-2813819 MsG0280006501.01.T01:intron 50.0%
ACTATAGCCAGGGAAAGCTC+TGG + Chr2:2818232-2818251 None:intergenic 50.0%
AGACGTGAAGATGCCTAGAG+AGG - Chr2:2816248-2816267 MsG0280006501.01.T01:intron 50.0%
AGAGCTTTCCCTGGCTATAG+TGG - Chr2:2818231-2818250 MsG0280006501.01.T01:intron 50.0%
AGAGTGAGAGTGAGAGTGAG+AGG + Chr2:2815062-2815081 None:intergenic 50.0%
AGCTTTCCCTGGCTATAGTG+GGG - Chr2:2818233-2818252 MsG0280006501.01.T01:intron 50.0%
ATTAGCCGAGTGTGTCCCTT+TGG + Chr2:2815127-2815146 None:intergenic 50.0%
CACCATTAGAGAGAGAGTGG+GGG - Chr2:2813163-2813182 MsG0280006501.01.T01:three_prime_UTR 50.0%
CGCAAAGGACTCCCTTCAAA+CGG + Chr2:2818856-2818875 None:intergenic 50.0%
CGGAGATGAGGATGTTGTGT+TGG - Chr2:2813102-2813121 MsG0280006501.01.T01:three_prime_UTR 50.0%
CTATAGGTCCGCCCATGTTT+AGG + Chr2:2813814-2813833 None:intergenic 50.0%
CTCGAACTCGTACGTAGAAC+TGG + Chr2:2816297-2816316 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + Chr2:2813447-2813466 None:intergenic 50.0%
GAGAGTGAGAGGTAAAAGGG+AGG + Chr2:2815051-2815070 None:intergenic 50.0%
GAGCTTTCCCTGGCTATAGT+GGG - Chr2:2818232-2818251 MsG0280006501.01.T01:intron 50.0%
GAGGAAGATGAAGAGAACGG+TGG - Chr2:2816267-2816286 MsG0280006501.01.T01:intron 50.0%
GATGTCGGCCGTCAAATAGA+AGG + Chr2:2815007-2815026 None:intergenic 50.0%
GCACTACCACACGAAATTGG+AGG + Chr2:2814680-2814699 None:intergenic 50.0%
GCAGCACTACCACACGAAAT+TGG + Chr2:2814683-2814702 None:intergenic 50.0%
GCGGAGACGTGCATATATAG+AGG + Chr2:2813676-2813695 None:intergenic 50.0%
GCTCCCAACTCGATCAATGA+GGG - Chr2:2814605-2814624 MsG0280006501.01.T01:intron 50.0%
GGCGGACCTATAGTGAAACA+TGG - Chr2:2813821-2813840 MsG0280006501.01.T01:intron 50.0%
TAACGAGGAGTCGAGGAGTA+TGG + Chr2:2813615-2813634 None:intergenic 50.0%
TAAGATGCACCCAGTACTCG+CGG + Chr2:2814832-2814851 None:intergenic 50.0%
TACCCCCACTCTCTCTCTAA+TGG + Chr2:2813168-2813187 None:intergenic 50.0%
TACCTGGTCCACCCTAAACA+TGG - Chr2:2813799-2813818 MsG0280006501.01.T01:intron 50.0%
TGCTCCCAACTCGATCAATG+AGG - Chr2:2814604-2814623 MsG0280006501.01.T01:intron 50.0%
TTCTTCAACTGGCTGGCAAG+TGG + Chr2:2815486-2815505 None:intergenic 50.0%
TTGAAGGGAGTCCTTTGCGT+TGG - Chr2:2818857-2818876 MsG0280006501.01.T01:intron 50.0%
! AACGAGGAGTCGAGGAGTAT+GGG + Chr2:2813614-2813633 None:intergenic 50.0%
! ACCGCTAAAAGAGCGTGAGA+TGG - Chr2:2817618-2817637 MsG0280006501.01.T01:intron 50.0%
! CTATGATTTAGGGTCAGGGG+CGG + Chr2:2814970-2814989 None:intergenic 50.0%
! GGCCCCTTTTCTCCTGATAA+AGG - Chr2:2815231-2815250 MsG0280006501.01.T01:intron 50.0%
! TTGCTGCTGACTGATGAGAG+TGG + Chr2:2814096-2814115 None:intergenic 50.0%
AAGATGCACCCAGTACTCGC+GGG + Chr2:2814831-2814850 None:intergenic 55.0%
ACCCAGTACTCGCGGGAAAA+AGG + Chr2:2814824-2814843 None:intergenic 55.0%
ACGAGTTCGAGCAGTAGCAC+AGG - Chr2:2816306-2816325 MsG0280006501.01.T01:intron 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + Chr2:2813439-2813458 None:intergenic 55.0%
AGTACTCGCGGGAAAAAGGC+AGG + Chr2:2814820-2814839 None:intergenic 55.0%
ATGCTAGGGTCACACCCACT+AGG - Chr2:2817114-2817133 MsG0280006501.01.T01:intron 55.0%
ATGTAGCCGACCCCACTTAG+TGG - Chr2:2813438-2813457 MsG0280006501.01.T01:intron 55.0%
CACTAGAGAGCAAGCAGCCA+AGG - Chr2:2818913-2818932 MsG0280006501.01.T01:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - Chr2:2813445-2813464 MsG0280006501.01.T01:intron 55.0%
CGCCCCTGACCCTAAATCAT+AGG - Chr2:2814968-2814987 MsG0280006501.01.T01:intron 55.0%
GCAAGCAGCCAAGGATCTTG+AGG - Chr2:2818922-2818941 MsG0280006501.01.T01:intron 55.0%
GTGATGACCAGAGCTTTCCC+TGG - Chr2:2818222-2818241 MsG0280006501.01.T01:intron 55.0%
TCCATCCTGCCTTGCTAACG+AGG + Chr2:2813630-2813649 None:intergenic 55.0%
TCCTCGACTCCTCGTTAGCA+AGG - Chr2:2813618-2813637 MsG0280006501.01.T01:intron 55.0%
TCCTCGTTAGCAAGGCAGGA+TGG - Chr2:2813626-2813645 MsG0280006501.01.T01:intron 55.0%
TGGTCCACCCTAAACATGGG+CGG - Chr2:2813803-2813822 MsG0280006501.01.T01:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG - Chr2:2813439-2813458 MsG0280006501.01.T01:intron 55.0%
TTCGCTCCCCACTATAGCCA+GGG + Chr2:2818242-2818261 None:intergenic 55.0%
TTTCGCTCCCCACTATAGCC+AGG + Chr2:2818243-2818262 None:intergenic 55.0%
! GCCTTTTTCCCGCGAGTACT+GGG - Chr2:2814820-2814839 MsG0280006501.01.T01:intron 55.0%
! TGCCTTTTTCCCGCGAGTAC+TGG - Chr2:2814819-2814838 MsG0280006501.01.T01:intron 55.0%
! TGTGGTAGTGCTGCCAGGTT+TGG - Chr2:2814689-2814708 MsG0280006501.01.T01:intron 55.0%
! TTTCGTGTGGTAGTGCTGCC+AGG - Chr2:2814684-2814703 MsG0280006501.01.T01:intron 55.0%
!! CAGGTTCTCGAGTATTGGGC+AGG - Chr2:2816729-2816748 MsG0280006501.01.T01:intron 55.0%
!! TCTCGAGTATTGGGCAGGCA+GGG - Chr2:2816734-2816753 MsG0280006501.01.T01:intron 55.0%
!! TTCTCGAGTATTGGGCAGGC+AGG - Chr2:2816733-2816752 MsG0280006501.01.T01:intron 55.0%
AGGTCCGCCCATGTTTAGGG+TGG + Chr2:2813810-2813829 None:intergenic 60.0%
CCACCTAGCTGCACCAAACC+TGG + Chr2:2814705-2814724 None:intergenic 60.0%
CGACTCCTCGTTAGCAAGGC+AGG - Chr2:2813622-2813641 MsG0280006501.01.T01:intron 60.0%
GCCTTGCTAACGAGGAGTCG+AGG + Chr2:2813622-2813641 None:intergenic 60.0%
GGCAAGTGGAGCCAGGGAAA+TGG + Chr2:2815472-2815491 None:intergenic 60.0%
! GCCCATGTTTAGGGTGGACC+AGG + Chr2:2813804-2813823 None:intergenic 60.0%
!! CCAGGTTTGGTGCAGCTAGG+TGG - Chr2:2814702-2814721 MsG0280006501.01.T01:intron 60.0%
!! CTCGAGTATTGGGCAGGCAG+GGG - Chr2:2816735-2816754 MsG0280006501.01.T01:intron 60.0%
!! CTGCCAGGTTTGGTGCAGCT+AGG - Chr2:2814699-2814718 MsG0280006501.01.T01:intron 60.0%
ACTGGCTGGCAAGTGGAGCC+AGG + Chr2:2815479-2815498 None:intergenic 65.0%
CTGGCTGGCAAGTGGAGCCA+GGG + Chr2:2815478-2815497 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 2813041 2819732 2813041 ID=MsG0280006501.01;Name=MsG0280006501.01
Chr2 mRNA 2813041 2819732 2813041 ID=MsG0280006501.01.T01;Parent=MsG0280006501.01;Name=MsG0280006501.01.T01;_AED=0.61;_eAED=0.67;_QI=417|0.71|0.62|0.87|0.85|0.87|8|200|253
Chr2 exon 2813041 2813291 2813041 ID=MsG0280006501.01.T01:exon:560;Parent=MsG0280006501.01.T01
Chr2 exon 2813830 2813910 2813830 ID=MsG0280006501.01.T01:exon:559;Parent=MsG0280006501.01.T01
Chr2 exon 2814441 2814558 2814441 ID=MsG0280006501.01.T01:exon:558;Parent=MsG0280006501.01.T01
Chr2 exon 2816001 2816041 2816001 ID=MsG0280006501.01.T01:exon:557;Parent=MsG0280006501.01.T01
Chr2 exon 2816118 2816213 2816118 ID=MsG0280006501.01.T01:exon:556;Parent=MsG0280006501.01.T01
Chr2 exon 2816312 2816525 2816312 ID=MsG0280006501.01.T01:exon:555;Parent=MsG0280006501.01.T01
Chr2 exon 2818068 2818229 2818068 ID=MsG0280006501.01.T01:exon:554;Parent=MsG0280006501.01.T01
Chr2 exon 2819317 2819732 2819317 ID=MsG0280006501.01.T01:exon:553;Parent=MsG0280006501.01.T01
Chr2 five_prime_UTR 2819317 2819732 2819317 ID=MsG0280006501.01.T01:five_prime_utr;Parent=MsG0280006501.01.T01
Chr2 five_prime_UTR 2818229 2818229 2818229 ID=MsG0280006501.01.T01:five_prime_utr;Parent=MsG0280006501.01.T01
Chr2 CDS 2818068 2818228 2818068 ID=MsG0280006501.01.T01:cds;Parent=MsG0280006501.01.T01
Chr2 CDS 2816312 2816525 2816312 ID=MsG0280006501.01.T01:cds;Parent=MsG0280006501.01.T01
Chr2 CDS 2816118 2816213 2816118 ID=MsG0280006501.01.T01:cds;Parent=MsG0280006501.01.T01
Chr2 CDS 2816001 2816041 2816001 ID=MsG0280006501.01.T01:cds;Parent=MsG0280006501.01.T01
Chr2 CDS 2814441 2814558 2814441 ID=MsG0280006501.01.T01:cds;Parent=MsG0280006501.01.T01
Chr2 CDS 2813830 2813910 2813830 ID=MsG0280006501.01.T01:cds;Parent=MsG0280006501.01.T01
Chr2 CDS 2813241 2813291 2813241 ID=MsG0280006501.01.T01:cds;Parent=MsG0280006501.01.T01
Chr2 three_prime_UTR 2813041 2813240 2813041 ID=MsG0280006501.01.T01:three_prime_utr;Parent=MsG0280006501.01.T01
Gene Sequence

>MsG0280006501.01.T01

ATGAAGAAATTCTTCCCTGTGTTGTCTAGAGACAAAGCTAGTTCTTCGACTACGGATATTGCTCCCAACTCGATCAATGAGGGTGTTAAAGTTGTTGATTATAAATTGCTGGAAACGGATCCAGGAATTAGGCCTCCAATTTCGTGTGGTAGTGCTGCCAGAGACGTGAAGATGCCTAGAGAGGAAGATGAAGAGAACGGTGGCGTGCCAGTTCTACGTACGAGTTCGAGCAGTAGCACAGGACGAGTTGAACGAAGAGCAGATCCTTTCCTCATAGTTTGTAGATGTTTCAGTTTGATTACCGCTTTAGCTGCTATTCTCTGCATCGCCGTTAACGTTCTCTCTGCTGTTCGCTCCTTCAAAAACACAAATACTATTTTCGATGGCATATTTCGTTGTTACGCCGTTCTCATTGCGATTTTTGTGGTTCTCGTTGAGACTGAATGGAGCTTCATAATTAAGTTTTGTCAGGTTCTCGAGTATTGGGCAGGCAGGGGTATGCTGCAGATTTTTGCGGCAGTGATGACCAGAGCTTTCCCTGGCTATAGTGGGGAGCGAAAATATCTCGTTATTCTTCAAAACATTGCATGCTATTTGCTTCTTTCTTGTGGCGTAGTTTACGTTATCTTGGGAGTCCTTTGCGTTGGTTTTCTAAAACGTCGTCGCCAGAAGCAAGAGATCACTAGAGAGCAAGCAGCCAAGGATCTTGAGGAGTTGGAACGACGTAGAGAAGAACTTGAGCAACTGCTTGTGACAGAATAG

Protein sequence

>MsG0280006501.01.T01

MKKFFPVLSRDKASSSTTDIAPNSINEGVKVVDYKLLETDPGIRPPISCGSAARDVKMPREEDEENGGVPVLRTSSSSSTGRVERRADPFLIVCRCFSLITALAAILCIAVNVLSAVRSFKNTNTIFDGIFRCYAVLIAIFVVLVETEWSFIIKFCQVLEYWAGRGMLQIFAAVMTRAFPGYSGERKYLVILQNIACYLLLSCGVVYVILGVLCVGFLKRRRQKQEITREQAAKDLEELERRREELEQLLVTE*