AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000284.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000284.01.T01 MTR_1g019110 92.778 180 8 2 1 175 1 180 1.78e-97 280
MsG0180000284.01.T01 MTR_3g102100 59.302 172 57 4 3 174 13 171 5.17e-64 194
MsG0180000284.01.T01 MTR_5g016750 51.149 174 56 4 21 173 9 174 5.36e-49 157
MsG0180000284.01.T01 MTR_5g012910 69.492 59 18 0 41 99 28 86 2.61e-24 94.0
MsG0180000284.01.T01 MTR_4g100650 67.797 59 19 0 41 99 74 132 5.11e-24 95.1
MsG0180000284.01.T01 MTR_2g101340 66.102 59 20 0 41 99 41 99 1.12e-23 92.8
MsG0180000284.01.T01 MTR_1g014800 53.846 78 36 0 20 97 10 87 1.12e-23 93.2
MsG0180000284.01.T01 MTR_6g088405 69.492 59 18 0 41 99 44 102 1.75e-23 92.8
MsG0180000284.01.T01 MTR_3g110205 66.102 59 20 0 41 99 43 101 1.91e-23 91.7
MsG0180000284.01.T01 MTR_1g014820 65.079 63 22 0 39 101 25 87 2.47e-23 93.2
MsG0180000284.01.T01 MTR_1g014860 67.797 59 19 0 39 97 20 78 2.89e-23 92.0
MsG0180000284.01.T01 MTR_7g117690 65.517 58 20 0 41 98 28 85 3.80e-23 90.5
MsG0180000284.01.T01 MTR_8g102800 54.430 79 35 1 22 99 17 95 5.43e-23 91.7
MsG0180000284.01.T01 MTR_5g008790 48.000 100 43 3 39 135 16 109 8.62e-23 89.4
MsG0180000284.01.T01 MTR_1g014780 48.913 92 44 1 9 97 3 94 8.88e-23 91.3
MsG0180000284.01.T01 MTR_7g046260 55.422 83 29 1 25 99 37 119 2.97e-22 89.7
MsG0180000284.01.T01 MTR_2g043030 64.912 57 20 0 41 97 19 75 1.75e-21 87.0
MsG0180000284.01.T01 MTR_2g043040 64.912 57 20 0 41 97 19 75 5.05e-21 86.7
MsG0180000284.01.T01 MTR_8g006410 63.333 60 22 0 41 100 52 111 8.04e-21 85.5
MsG0180000284.01.T01 MTR_7g021010 45.055 91 47 1 31 118 2 92 9.98e-21 83.2
MsG0180000284.01.T01 MTR_3g105510 58.730 63 26 0 34 96 30 92 1.00e-20 85.9
MsG0180000284.01.T01 MTR_5g062700 46.535 101 43 3 36 136 168 257 1.13e-20 87.8
MsG0180000284.01.T01 MTR_7g021010 43.956 91 48 1 31 118 41 131 1.44e-20 84.0
MsG0180000284.01.T01 MTR_8g013860 61.017 59 23 0 41 99 47 105 1.98e-20 84.3
MsG0180000284.01.T01 MTR_5g083340 62.712 59 22 0 41 99 85 143 2.62e-20 87.0
MsG0180000284.01.T01 MTR_3g053690 42.063 126 63 3 41 166 27 142 2.66e-20 84.3
MsG0180000284.01.T01 MTR_2g089170 59.322 59 24 0 41 99 65 123 2.69e-20 83.6
MsG0180000284.01.T01 MTR_2g043050 64.912 57 20 0 41 97 19 75 3.72e-20 84.0
MsG0180000284.01.T01 MTR_8g027465 60.345 58 23 0 41 98 39 96 3.79e-20 82.8
MsG0180000284.01.T01 MTR_1g101600 55.405 74 32 1 30 102 29 102 3.94e-20 83.6
MsG0180000284.01.T01 MTR_7g092190 62.712 59 22 0 41 99 30 88 4.55e-20 85.1
MsG0180000284.01.T01 MTR_4g086160 59.649 57 23 0 41 97 96 152 4.72e-20 84.0
MsG0180000284.01.T01 MTR_1g090170 59.016 61 25 0 39 99 150 210 5.52e-20 85.1
MsG0180000284.01.T01 MTR_4g086165 59.649 57 23 0 41 97 82 138 7.30e-20 82.8
MsG0180000284.01.T01 MTR_8g092460 48.235 85 43 1 28 111 132 216 7.48e-20 84.7
MsG0180000284.01.T01 MTR_1g090170 59.016 61 25 0 39 99 237 297 1.15e-19 85.1
MsG0180000284.01.T01 MTR_4g086220 59.649 57 23 0 41 97 96 152 1.22e-19 82.8
MsG0180000284.01.T01 MTR_4g035430 50.746 67 33 0 32 98 23 89 1.30e-19 82.4
MsG0180000284.01.T01 MTR_3g074130 49.438 89 39 1 11 99 126 208 1.30e-19 84.3
MsG0180000284.01.T01 MTR_4g100420 65.517 58 19 1 41 97 157 214 2.02e-19 83.6
MsG0180000284.01.T01 MTR_2g043020 61.404 57 22 0 41 97 19 75 2.09e-19 81.6
MsG0180000284.01.T01 MTR_4g086190 59.649 57 23 0 41 97 96 152 2.32e-19 82.0
MsG0180000284.01.T01 MTR_7g020980 48.611 72 37 0 31 102 41 112 2.33e-19 80.9
MsG0180000284.01.T01 MTR_4g100450 63.793 58 20 1 41 97 154 211 4.09e-19 82.8
MsG0180000284.01.T01 MTR_0939s0010 55.932 59 26 0 41 99 65 123 5.25e-19 80.5
MsG0180000284.01.T01 MTR_8g090350 56.061 66 29 0 36 101 108 173 8.50e-19 81.6
MsG0180000284.01.T01 MTR_1g048610 55.224 67 29 1 41 106 89 155 9.31e-19 80.5
MsG0180000284.01.T01 MTR_2g090235 59.016 61 25 0 41 101 218 278 9.80e-19 82.8
MsG0180000284.01.T01 MTR_7g081815 40.196 102 56 2 12 108 28 129 1.14e-18 79.7
MsG0180000284.01.T01 MTR_7g081795 48.810 84 39 2 24 103 40 123 1.30e-18 79.7
MsG0180000284.01.T01 MTR_6g465530 40.367 109 61 2 30 134 21 129 1.86e-18 79.0
MsG0180000284.01.T01 MTR_2g435590 53.521 71 31 1 28 98 85 153 2.03e-18 80.1
MsG0180000284.01.T01 MTR_7g028925 48.315 89 37 2 9 97 3 82 2.47e-18 75.9
MsG0180000284.01.T01 MTR_3g105480 62.963 54 20 0 43 96 33 86 3.04e-18 79.0
MsG0180000284.01.T01 MTR_1g090290 46.341 82 38 2 22 97 89 170 3.05e-18 78.6
MsG0180000284.01.T01 MTR_1g070070 51.351 74 35 1 25 97 5 78 3.26e-18 77.0
MsG0180000284.01.T01 MTR_5g008590 49.505 101 42 2 41 141 11 102 6.73e-18 77.4
MsG0180000284.01.T01 MTR_2g014340 51.429 70 32 1 28 97 8 75 8.17e-18 77.4
MsG0180000284.01.T01 MTR_5g008470 58.621 58 24 0 43 100 77 134 8.42e-18 77.0
MsG0180000284.01.T01 MTR_1g087920 51.351 74 34 1 24 97 62 133 1.16e-17 78.6
MsG0180000284.01.T01 MTR_2g105380 45.349 86 45 1 13 98 91 174 1.21e-17 79.3
MsG0180000284.01.T01 MTR_7g081805 54.545 66 29 1 39 103 59 124 1.86e-17 76.6
MsG0180000284.01.T01 MTR_8g006815 53.731 67 30 1 41 106 96 162 2.08e-17 76.3
MsG0180000284.01.T01 MTR_4g078710 56.140 57 25 0 41 97 28 84 2.15e-17 76.6
MsG0180000284.01.T01 MTR_6g465420 38.739 111 64 2 30 136 42 152 2.83e-17 77.0
MsG0180000284.01.T01 MTR_1g074230 52.857 70 32 1 29 97 7 76 2.86e-17 74.3
MsG0180000284.01.T01 MTR_2g015040 43.333 90 46 2 13 97 31 120 3.34e-17 74.7
MsG0180000284.01.T01 MTR_5g008550 51.136 88 35 1 41 128 21 100 3.34e-17 75.5
MsG0180000284.01.T01 MTR_1g074310 48.718 78 37 2 21 97 3 78 3.91e-17 74.3
MsG0180000284.01.T01 MTR_6g465510 51.351 74 35 1 30 102 21 94 5.93e-17 75.1
MsG0180000284.01.T01 MTR_8g022820 58.621 58 24 0 41 98 124 181 7.78e-17 77.0
MsG0180000284.01.T01 MTR_8g022820 58.621 58 24 0 41 98 124 181 7.78e-17 77.0
MsG0180000284.01.T01 MTR_8g022820 58.621 58 24 0 41 98 123 180 7.90e-17 77.0
MsG0180000284.01.T01 MTR_2g015050 54.286 70 30 2 30 97 122 191 8.19e-17 76.3
MsG0180000284.01.T01 MTR_5g082950 60.714 56 22 0 41 96 66 121 8.43e-17 76.6
MsG0180000284.01.T01 MTR_5g083330 52.055 73 34 1 28 99 21 93 9.40e-17 76.3
MsG0180000284.01.T01 MTR_6g466130 52.857 70 32 1 30 98 54 123 1.02e-16 75.1
MsG0180000284.01.T01 MTR_4g008860 56.140 57 25 0 41 97 8 64 1.03e-16 74.3
MsG0180000284.01.T01 MTR_6g088425 44.554 101 45 1 10 99 7 107 1.20e-16 75.1
MsG0180000284.01.T01 MTR_3g090760 55.172 58 26 0 39 96 111 168 1.21e-16 76.3
MsG0180000284.01.T01 MTR_5g009620 46.154 78 38 1 23 96 90 167 1.23e-16 75.9
MsG0180000284.01.T01 MTR_8g006825 55.556 63 27 1 39 100 94 156 1.48e-16 74.3
MsG0180000284.01.T01 MTR_6g465450 50.000 74 36 1 30 102 42 115 1.53e-16 74.7
MsG0180000284.01.T01 MTR_6g466000 42.157 102 50 2 30 130 45 138 1.80e-16 74.3
MsG0180000284.01.T01 MTR_8g006840 54.688 64 28 1 41 103 125 188 1.88e-16 73.9
MsG0180000284.01.T01 MTR_1g028560 55.357 56 25 0 41 96 115 170 2.08e-16 75.9
MsG0180000284.01.T01 MTR_1g006660 52.941 85 36 2 17 99 23 105 2.32e-16 74.7
MsG0180000284.01.T01 MTR_6g465690 52.857 70 32 1 30 98 51 120 2.97e-16 74.3
MsG0180000284.01.T01 MTR_6g465430 36.937 111 66 2 30 136 42 152 3.21e-16 73.9
MsG0180000284.01.T01 MTR_5g008540 47.761 67 35 0 43 109 26 92 4.28e-16 70.1
MsG0180000284.01.T01 MTR_2g078680 53.333 60 28 0 41 100 31 90 4.91e-16 72.8
MsG0180000284.01.T01 MTR_4g088005 46.512 86 43 2 13 97 31 114 5.45e-16 70.5
MsG0180000284.01.T01 MTR_4g114570 50.847 59 29 0 39 97 5 63 6.30e-16 72.8
MsG0180000284.01.T01 MTR_2g085015 40.000 120 59 4 41 158 47 155 6.36e-16 72.8
MsG0180000284.01.T01 MTR_7g096750 54.839 62 27 1 41 101 20 81 6.44e-16 70.9
MsG0180000284.01.T01 MTR_4g010640 50.847 59 29 0 39 97 5 63 8.83e-16 72.4
MsG0180000284.01.T01 MTR_5g058470 66.667 60 19 1 39 97 94 153 1.05e-15 73.2
MsG0180000284.01.T01 MTR_3g072610 63.934 61 20 1 39 97 23 83 1.13e-15 72.0
MsG0180000284.01.T01 MTR_2g014300 56.140 57 25 0 41 97 15 71 1.25e-15 70.9
MsG0180000284.01.T01 MTR_6g465850 53.448 58 27 0 41 98 63 120 1.54e-15 72.8
MsG0180000284.01.T01 MTR_7g096700 56.897 58 24 1 41 97 20 77 1.76e-15 69.7
MsG0180000284.01.T01 MTR_7g070220 53.968 63 22 1 41 96 78 140 1.94e-15 73.6
MsG0180000284.01.T01 MTR_3g106290 54.386 57 26 0 41 97 8 64 2.11e-15 70.9
MsG0180000284.01.T01 MTR_2g438180 54.839 62 27 1 41 101 14 75 2.43e-15 69.3
MsG0180000284.01.T01 MTR_4g102670 61.404 57 21 1 41 97 15 70 2.62e-15 70.1
MsG0180000284.01.T01 MTR_6g465460 36.036 111 67 2 30 136 42 152 2.87e-15 71.6
MsG0180000284.01.T01 MTR_6g466020 51.471 68 32 1 32 98 33 100 2.89e-15 70.1
MsG0180000284.01.T01 MTR_2g103700 49.153 59 30 0 39 97 5 63 3.67e-15 69.7
MsG0180000284.01.T01 MTR_4g054740 50.000 64 31 1 41 103 97 160 4.27e-15 70.9
MsG0180000284.01.T01 MTR_8g085960 45.000 80 41 1 20 96 1 80 8.82e-15 70.1
MsG0180000284.01.T01 MTR_4g054360 50.000 64 31 1 41 103 124 187 8.84e-15 70.5
MsG0180000284.01.T01 MTR_5g010940 54.688 64 23 1 41 98 54 117 1.67e-14 68.9
MsG0180000284.01.T01 MTR_5g010910 54.688 64 23 1 41 98 49 112 2.91e-14 68.6
MsG0180000284.01.T01 MTR_8g032610 44.737 76 42 0 28 103 14 89 3.31e-14 69.3
MsG0180000284.01.T01 MTR_5g085070 52.632 57 27 0 41 97 51 107 3.94e-14 68.9
MsG0180000284.01.T01 MTR_5g075570 39.241 79 48 0 41 119 124 202 3.95e-14 68.9
MsG0180000284.01.T01 MTR_2g019750 31.159 138 89 3 29 164 39 172 4.39e-14 68.9
MsG0180000284.01.T01 MTR_5g010930 41.905 105 46 3 41 139 49 144 4.46e-14 67.8
MsG0180000284.01.T01 MTR_3g095190 57.576 66 28 0 33 98 162 227 5.17e-14 68.9
MsG0180000284.01.T01 MTR_5g085100 50.877 57 28 0 41 97 46 102 5.38e-14 68.6
MsG0180000284.01.T01 MTR_4g054860 50.794 63 30 1 42 103 132 194 6.31e-14 68.2
MsG0180000284.01.T01 MTR_4g100380 50.000 70 34 1 29 97 133 202 6.34e-14 68.2
MsG0180000284.01.T01 MTR_3g112440 47.561 82 43 0 29 110 27 108 9.56e-14 67.0
MsG0180000284.01.T01 MTR_8g099215 53.448 58 27 0 39 96 105 162 1.07e-13 67.8
MsG0180000284.01.T01 MTR_8g023680 40.260 77 42 1 6 82 85 157 1.12e-13 68.2
MsG0180000284.01.T01 MTR_1g040430 56.000 50 21 1 49 97 119 168 1.69e-13 65.9
MsG0180000284.01.T01 MTR_3g098580 58.621 58 24 0 41 98 76 133 1.87e-13 66.6
MsG0180000284.01.T01 MTR_7g085810 38.095 84 51 1 13 96 3 85 1.87e-13 66.6
MsG0180000284.01.T01 MTR_1g069985 50.847 59 28 1 39 96 73 131 2.10e-13 65.9
MsG0180000284.01.T01 MTR_4g082345 46.269 67 36 0 30 96 37 103 2.47e-13 67.0
MsG0180000284.01.T01 MTR_1g074250 50.847 59 27 1 41 97 19 77 2.84e-13 63.9
MsG0180000284.01.T01 MTR_8g069360 50.000 56 28 0 41 96 44 99 4.09e-13 66.6
MsG0180000284.01.T01 MTR_7g011630 43.243 74 38 1 27 96 24 97 5.58e-13 66.2
MsG0180000284.01.T01 MTR_1g023170 52.113 71 34 0 29 99 28 98 7.87e-13 65.1
MsG0180000284.01.T01 MTR_1g070035 49.153 59 29 1 39 96 75 133 8.20e-13 64.3
MsG0180000284.01.T01 MTR_4g102660 53.425 73 30 3 30 98 32 104 9.63e-13 64.3
MsG0180000284.01.T01 MTR_7g096810 59.375 64 25 1 35 97 7 70 1.08e-12 62.0
MsG0180000284.01.T01 MTR_8g023700 41.558 77 42 1 6 82 85 158 1.27e-12 65.1
MsG0180000284.01.T01 MTR_1g012470 50.704 71 33 1 41 111 7 75 1.60e-12 63.2
MsG0180000284.01.T01 MTR_1g070045 44.595 74 37 2 24 96 52 122 2.26e-12 62.4
MsG0180000284.01.T01 MTR_4g111915 39.506 81 47 1 19 97 29 109 2.46e-12 61.6
MsG0180000284.01.T01 MTR_2g016730 40.260 77 46 0 20 96 2 78 2.63e-12 63.9
MsG0180000284.01.T01 MTR_6g012970 43.548 62 35 0 35 96 32 93 2.65e-12 64.3
MsG0180000284.01.T01 MTR_5g032820 50.000 56 28 0 41 96 46 101 4.29e-12 63.5
MsG0180000284.01.T01 MTR_5g009410 48.421 95 47 1 39 133 115 207 4.85e-12 63.2
MsG0180000284.01.T01 MTR_6g033255 52.055 73 31 1 28 100 11 79 4.99e-12 62.0
MsG0180000284.01.T01 MTR_4g112490 39.506 81 47 1 19 97 29 109 6.84e-12 61.6
MsG0180000284.01.T01 MTR_1g070015 49.123 57 28 1 41 96 84 140 6.90e-12 62.0
MsG0180000284.01.T01 MTR_1g070020 45.312 64 34 1 34 96 63 126 8.27e-12 61.6
MsG0180000284.01.T01 MTR_1g069960 60.345 58 22 1 41 97 27 84 1.45e-11 59.7
MsG0180000284.01.T01 MTR_1g070000 49.091 55 27 1 43 96 86 140 2.35e-11 60.5
MsG0180000284.01.T01 MTR_1g069945 47.945 73 37 1 39 110 99 171 2.53e-11 60.8
MsG0180000284.01.T01 MTR_4g119270 39.706 68 40 1 29 96 42 108 2.80e-11 61.2
MsG0180000284.01.T01 MTR_6g029180 41.176 68 40 0 29 96 21 88 5.39e-11 60.1
MsG0180000284.01.T01 MTR_3g107380 50.725 69 32 1 39 107 6 72 5.92e-11 59.3
MsG0180000284.01.T01 MTR_1g101550 57.377 61 25 1 41 101 57 116 7.22e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000284.01.T01 AT2G23340 55.333 150 60 2 30 174 17 164 2.75e-50 160
MsG0180000284.01.T01 AT1G46768 57.664 137 46 2 39 175 29 153 4.54e-49 156
MsG0180000284.01.T01 AT1G46768 57.664 137 46 2 39 175 29 153 4.54e-49 156
MsG0180000284.01.T01 AT3G50260 58.219 146 46 4 31 175 15 146 8.45e-49 155
MsG0180000284.01.T01 AT5G67190 66.102 118 32 2 35 152 15 124 3.37e-48 155
MsG0180000284.01.T01 AT1G46768 64.035 114 39 1 39 152 29 140 4.20e-47 150
MsG0180000284.01.T01 AT4G36900 50.000 168 55 3 35 173 24 191 1.15e-44 146
MsG0180000284.01.T01 AT4G06746 74.227 97 22 1 39 135 34 127 3.97e-44 143
MsG0180000284.01.T01 AT1G71450 39.860 143 68 2 24 166 7 131 1.07e-26 100
MsG0180000284.01.T01 AT4G16750 55.696 79 31 1 23 101 26 100 1.24e-25 97.4
MsG0180000284.01.T01 AT1G21910 52.083 96 33 3 41 130 50 138 5.83e-25 97.1
MsG0180000284.01.T01 AT2G35700 62.295 61 23 0 41 101 45 105 3.68e-23 91.3
MsG0180000284.01.T01 AT5G11590 66.102 59 20 0 41 99 51 109 4.90e-23 92.0
MsG0180000284.01.T01 AT4G32800 60.294 68 27 0 32 99 10 77 5.30e-23 91.7
MsG0180000284.01.T01 AT1G74930 60.811 74 24 2 29 97 4 77 6.56e-23 90.5
MsG0180000284.01.T01 AT3G16280 62.712 59 22 0 41 99 61 119 7.40e-23 91.7
MsG0180000284.01.T01 AT3G16280 62.712 59 22 0 41 99 79 137 7.57e-23 92.0
MsG0180000284.01.T01 AT1G19210 57.971 69 28 1 31 98 1 69 2.50e-22 89.0
MsG0180000284.01.T01 AT2G20880 51.111 90 42 1 37 124 183 272 3.71e-22 91.3
MsG0180000284.01.T01 AT3G60490 66.102 59 20 0 41 99 71 129 5.02e-22 89.7
MsG0180000284.01.T01 AT2G44940 64.407 59 21 0 41 99 100 158 6.49e-22 90.1
MsG0180000284.01.T01 AT2G33710 40.000 110 52 2 3 98 18 127 7.44e-22 88.6
MsG0180000284.01.T01 AT1G01250 65.517 58 20 0 41 98 45 102 8.32e-22 87.8
MsG0180000284.01.T01 AT2G33710 40.000 110 52 2 3 98 18 127 8.59e-22 88.2
MsG0180000284.01.T01 AT2G25820 66.102 59 20 0 41 99 26 84 1.10e-21 88.2
MsG0180000284.01.T01 AT5G25810 62.712 59 22 0 41 99 36 94 3.29e-21 86.7
MsG0180000284.01.T01 AT2G22200 48.810 84 43 0 41 124 71 154 3.31e-21 87.8
MsG0180000284.01.T01 AT5G21960 63.793 58 21 0 41 98 7 64 6.90e-21 85.9
MsG0180000284.01.T01 AT4G28140 62.903 62 23 0 37 98 139 200 1.09e-20 86.7
MsG0180000284.01.T01 AT1G71520 39.837 123 54 3 41 159 14 120 1.18e-20 83.6
MsG0180000284.01.T01 AT1G36060 46.602 103 42 2 36 136 138 229 1.53e-20 86.7
MsG0180000284.01.T01 AT2G47520 50.588 85 36 2 32 116 43 121 1.59e-20 84.0
MsG0180000284.01.T01 AT4G27950 35.404 161 81 4 21 173 95 240 2.05e-20 86.7
MsG0180000284.01.T01 AT4G13620 62.295 61 23 0 39 99 230 290 2.92e-20 86.7
MsG0180000284.01.T01 AT4G39780 54.930 71 32 0 33 103 85 155 3.09e-20 85.1
MsG0180000284.01.T01 AT1G77640 50.000 96 46 1 35 130 37 130 5.53e-20 84.0
MsG0180000284.01.T01 AT5G65130 54.795 73 30 1 31 100 98 170 7.45e-20 84.3
MsG0180000284.01.T01 AT1G22190 54.930 71 32 0 36 106 78 148 7.45e-20 84.0
MsG0180000284.01.T01 AT5G65130 54.795 73 30 1 31 100 100 172 7.74e-20 84.3
MsG0180000284.01.T01 AT5G47230 67.241 58 18 1 41 97 156 213 1.03e-19 84.3
MsG0180000284.01.T01 AT1G75490 60.000 60 24 0 41 100 42 101 1.65e-19 82.0
MsG0180000284.01.T01 AT1G22810 45.361 97 42 2 41 135 14 101 1.83e-19 80.5
MsG0180000284.01.T01 AT3G57600 54.930 71 32 0 29 99 16 86 1.93e-19 83.2
MsG0180000284.01.T01 AT4G31060 56.522 69 29 1 29 97 16 83 2.35e-19 81.3
MsG0180000284.01.T01 AT1G33760 70.000 60 18 0 41 100 20 79 5.36e-19 80.1
MsG0180000284.01.T01 AT1G78080 53.425 73 34 0 27 99 138 210 5.37e-19 82.8
MsG0180000284.01.T01 AT4G11140 57.895 57 24 0 41 97 87 143 8.65e-19 81.6
MsG0180000284.01.T01 AT5G05410 61.404 57 22 0 41 97 79 135 9.74e-19 81.6
MsG0180000284.01.T01 AT2G40340 49.296 71 36 0 29 99 2 72 9.79e-19 81.3
MsG0180000284.01.T01 AT2G40340 49.296 71 36 0 29 99 2 72 9.79e-19 81.3
MsG0180000284.01.T01 AT2G40340 49.296 71 36 0 29 99 2 72 9.79e-19 81.3
MsG0180000284.01.T01 AT2G44840 58.209 67 26 2 35 100 87 152 1.17e-18 80.1
MsG0180000284.01.T01 AT5G05410 61.404 57 22 0 41 97 79 135 1.33e-18 81.6
MsG0180000284.01.T01 AT4G25480 55.714 70 30 1 30 98 39 108 1.40e-18 79.7
MsG0180000284.01.T01 AT4G25490 57.353 68 28 1 30 96 36 103 1.43e-18 79.7
MsG0180000284.01.T01 AT1G77200 61.765 68 26 0 32 99 34 101 1.71e-18 80.1
MsG0180000284.01.T01 AT5G51990 58.824 68 27 1 30 96 42 109 1.74e-18 79.7
MsG0180000284.01.T01 AT5G61600 63.793 58 20 1 41 97 88 145 1.88e-18 80.1
MsG0180000284.01.T01 AT4G25470 55.714 70 30 1 30 98 39 108 2.20e-18 79.3
MsG0180000284.01.T01 AT5G51190 60.345 58 22 1 41 97 72 129 2.73e-18 79.0
MsG0180000284.01.T01 AT5G07580 62.069 58 21 1 41 97 110 167 3.38e-18 78.6
MsG0180000284.01.T01 AT3G20310 59.649 57 23 0 41 97 27 83 3.46e-18 79.3
MsG0180000284.01.T01 AT5G61890 56.897 58 25 0 41 98 90 147 3.53e-18 79.3
MsG0180000284.01.T01 AT2G40340 49.296 71 36 0 29 99 60 130 3.55e-18 80.1
MsG0180000284.01.T01 AT2G40340 49.296 71 36 0 29 99 67 137 3.66e-18 80.5
MsG0180000284.01.T01 AT2G40340 49.296 71 36 0 29 99 60 130 3.72e-18 80.5
MsG0180000284.01.T01 AT4G17490 62.069 58 21 1 41 97 137 194 3.99e-18 79.7
MsG0180000284.01.T01 AT3G16770 55.224 67 30 0 33 99 71 137 4.34e-18 79.0
MsG0180000284.01.T01 AT5G13330 56.897 58 25 0 41 98 39 96 4.72e-18 78.2
MsG0180000284.01.T01 AT3G15210 53.030 66 30 1 41 105 25 90 8.14e-18 77.8
MsG0180000284.01.T01 AT1G44830 66.667 63 20 1 38 99 32 94 1.14e-17 77.4
MsG0180000284.01.T01 AT3G61630 56.897 58 25 0 39 96 103 160 1.33e-17 79.0
MsG0180000284.01.T01 AT1G03800 48.649 74 36 1 28 101 42 113 2.65e-17 77.0
MsG0180000284.01.T01 AT5G53290 43.011 93 51 1 4 96 90 180 2.65e-17 78.2
MsG0180000284.01.T01 AT5G18450 51.471 68 33 0 29 96 22 89 4.03e-17 77.4
MsG0180000284.01.T01 AT1G28360 53.968 63 29 0 41 103 12 74 4.26e-17 75.5
MsG0180000284.01.T01 AT4G23750 58.621 58 24 0 39 96 120 177 4.44e-17 77.4
MsG0180000284.01.T01 AT4G23750 58.621 58 24 0 39 96 120 177 4.44e-17 77.4
MsG0180000284.01.T01 AT1G72360 47.368 76 40 0 22 97 57 132 4.59e-17 76.6
MsG0180000284.01.T01 AT5G25390 50.820 61 30 0 39 99 5 65 4.98e-17 75.1
MsG0180000284.01.T01 AT1G28370 56.140 57 25 0 41 97 20 76 1.08e-16 73.6
MsG0180000284.01.T01 AT1G72360 53.968 63 29 0 35 97 19 81 1.19e-16 74.7
MsG0180000284.01.T01 AT1G28370 56.140 57 25 0 41 97 58 114 1.46e-16 74.3
MsG0180000284.01.T01 AT1G15360 54.237 59 27 0 39 97 5 63 1.63e-16 73.9
MsG0180000284.01.T01 AT1G15360 54.237 59 27 0 39 97 5 63 1.63e-16 73.9
MsG0180000284.01.T01 AT5G44210 54.386 57 26 0 41 97 33 89 1.68e-16 73.9
MsG0180000284.01.T01 AT1G72360 53.968 63 29 0 35 97 68 130 1.75e-16 75.1
MsG0180000284.01.T01 AT2G36450 53.521 71 31 2 29 97 2 72 2.23e-16 73.2
MsG0180000284.01.T01 AT5G25190 54.386 57 26 0 41 97 8 64 3.34e-16 72.8
MsG0180000284.01.T01 AT3G11020 55.172 58 26 0 41 98 78 135 6.49e-16 74.3
MsG0180000284.01.T01 AT1G50640 54.386 57 26 0 41 97 28 84 1.07e-15 72.4
MsG0180000284.01.T01 AT1G12610 62.500 56 21 0 41 96 30 85 1.11e-15 72.0
MsG0180000284.01.T01 AT5G47220 47.561 82 33 2 26 97 93 174 1.11e-15 72.4
MsG0180000284.01.T01 AT1G63030 42.222 90 44 1 41 130 30 111 1.32e-15 71.2
MsG0180000284.01.T01 AT1G63030 42.222 90 44 1 41 130 30 111 1.32e-15 71.2
MsG0180000284.01.T01 AT3G23230 56.897 58 24 1 41 97 20 77 1.50e-15 70.1
MsG0180000284.01.T01 AT5G43410 55.172 58 25 1 41 97 15 72 1.92e-15 69.7
MsG0180000284.01.T01 AT2G40350 41.975 81 47 0 19 99 52 132 2.02e-15 70.5
MsG0180000284.01.T01 AT2G40350 41.975 81 47 0 19 99 45 125 2.72e-15 69.7
MsG0180000284.01.T01 AT2G38340 49.351 77 31 1 41 109 70 146 5.69e-15 70.5
MsG0180000284.01.T01 AT4G17500 56.667 60 25 1 39 97 146 205 1.42e-14 70.1
MsG0180000284.01.T01 AT5G25390 49.180 61 28 1 39 99 5 62 1.84e-14 68.2
MsG0180000284.01.T01 AT1G71130 41.284 109 48 4 5 108 52 149 1.92e-14 67.8
MsG0180000284.01.T01 AT3G23240 50.794 63 30 1 35 96 76 138 1.99e-14 68.9
MsG0180000284.01.T01 AT1G43160 61.667 60 23 0 39 98 59 118 2.57e-14 68.2
MsG0180000284.01.T01 AT2G46310 47.541 61 32 0 36 96 94 154 2.64e-14 69.3
MsG0180000284.01.T01 AT5G50080 50.000 86 34 2 20 98 60 143 1.14e-13 67.0
MsG0180000284.01.T01 AT5G52020 60.656 61 23 1 41 101 65 124 1.20e-13 67.0
MsG0180000284.01.T01 AT5G64750 58.000 50 21 0 49 98 193 242 1.22e-13 68.2
MsG0180000284.01.T01 AT5G50080 50.000 86 34 2 20 98 51 134 1.50e-13 66.6
MsG0180000284.01.T01 AT5G07310 58.621 58 24 0 41 98 92 149 3.72e-13 65.9
MsG0180000284.01.T01 AT2G31230 41.892 74 42 1 39 111 84 157 6.60e-13 65.1
MsG0180000284.01.T01 AT2G40220 64.286 56 20 0 41 96 55 110 1.79e-12 64.7
MsG0180000284.01.T01 AT1G53910 35.338 133 79 2 41 169 123 252 2.45e-12 64.3
MsG0180000284.01.T01 AT1G64380 60.563 71 26 1 36 106 131 199 2.60e-12 64.3
MsG0180000284.01.T01 AT1G53910 35.338 133 79 2 41 169 125 254 2.69e-12 64.3
MsG0180000284.01.T01 AT1G53910 35.338 133 79 2 41 169 125 254 2.69e-12 64.3
MsG0180000284.01.T01 AT5G19790 40.260 77 46 0 20 96 1 77 2.97e-12 63.5
MsG0180000284.01.T01 AT4G34410 57.895 57 24 0 41 97 136 192 2.97e-12 63.5
MsG0180000284.01.T01 AT5G61590 63.793 58 20 1 41 97 107 164 5.05e-12 62.0
MsG0180000284.01.T01 AT1G22985 50.820 61 27 1 39 96 73 133 5.91e-12 60.8
MsG0180000284.01.T01 AT1G12980 50.000 56 28 0 41 96 57 112 6.51e-12 63.2
MsG0180000284.01.T01 AT5G18560 39.706 68 41 0 29 96 43 110 1.11e-11 62.4
MsG0180000284.01.T01 AT3G14230 62.069 58 22 0 41 98 123 180 1.64e-11 62.0
MsG0180000284.01.T01 AT3G14230 62.069 58 22 0 41 98 124 181 1.73e-11 62.0
MsG0180000284.01.T01 AT1G12890 43.662 71 38 1 28 96 6 76 1.82e-11 60.8
MsG0180000284.01.T01 AT3G14230 62.069 58 22 0 41 98 128 185 1.97e-11 61.6
MsG0180000284.01.T01 AT1G68550 61.538 39 15 0 43 81 115 153 2.29e-11 61.2
MsG0180000284.01.T01 AT1G68550 61.538 39 15 0 43 81 115 153 2.29e-11 61.2
MsG0180000284.01.T01 AT1G24590 50.000 56 28 0 41 96 58 113 2.46e-11 61.2
MsG0180000284.01.T01 AT1G28160 48.214 56 29 0 41 96 39 94 5.13e-11 59.7
MsG0180000284.01.T01 AT5G13910 41.538 65 38 0 32 96 11 75 7.27e-11 58.9

Find 29 sgRNAs with CRISPR-Local

Find 32 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCAACAATCTTCAGGTTT+TGG 0.213321 1:+3830732 None:intergenic
CAAACAAGAGATCAAGAATT+TGG 0.229206 1:-3831064 MsG0180000284.01.T01:CDS
CTCATCCTTATTCCTCTATA+TGG 0.230567 1:+3831122 None:intergenic
ACAACAGTTCTGGAAAATTA+AGG 0.258743 1:+3830961 None:intergenic
CTTGGAGTGAACATGATTAT+TGG 0.270551 1:+3830791 None:intergenic
CAAATTCTTGATCTCTTGTT+TGG 0.310510 1:+3831065 None:intergenic
TTGCATGATCAACAATCTTC+AGG 0.324330 1:+3830726 None:intergenic
TGGTCTTTGAACAACAGTTC+TGG 0.346041 1:+3830951 None:intergenic
TGAAACCATATAGAGGAATA+AGG 0.368718 1:-3831127 MsG0180000284.01.T01:CDS
TTTGTGATCTACAGGGATAT+TGG 0.377358 1:+3831193 None:intergenic
AGGGTATGGAAGAAGAAGAT+AGG 0.393416 1:-3831244 None:intergenic
ATATGTCGGCTGATTCAATA+AGG 0.409220 1:-3830893 MsG0180000284.01.T01:CDS
TAAGCACGTGCTGCAGCAAT+AGG 0.431148 1:+3831023 None:intergenic
AAGAGATCAAGAATTTGGTT+AGG 0.437115 1:-3831059 MsG0180000284.01.T01:CDS
GAGGAATAAGGATGAGAAAG+TGG 0.441232 1:-3831115 MsG0180000284.01.T01:CDS
TTTGGAAACTCATTCAAGTC+AGG 0.457299 1:+3830750 None:intergenic
GATGAGAAAGTGGGGTAAGT+GGG 0.457552 1:-3831105 MsG0180000284.01.T01:CDS
AGGAATAAGGATGAGAAAGT+GGG 0.476638 1:-3831114 MsG0180000284.01.T01:CDS
GGATGAGAAAGTGGGGTAAG+TGG 0.483953 1:-3831106 MsG0180000284.01.T01:CDS
TTTGAGAGAAGAAGTAGACT+TGG 0.487930 1:+3830773 None:intergenic
GGGTATGGAAGAAGAAGATA+GGG 0.511618 1:-3831243 None:intergenic
AAAGCTATGAAACCATATAG+AGG 0.522157 1:-3831134 MsG0180000284.01.T01:CDS
AAAATAACAATTACAATAAG+GGG 0.554605 1:-3831172 MsG0180000284.01.T01:CDS
GAGAAAGTGGGGTAAGTGGG+TGG 0.554706 1:-3831102 MsG0180000284.01.T01:CDS
GGAAAATTAAGGTTTGCAGA+AGG 0.561895 1:+3830972 None:intergenic
GGAATAAGGATGAGAAAGTG+GGG 0.610907 1:-3831113 MsG0180000284.01.T01:CDS
ACAACAACGTGGGAATATGT+CGG 0.633780 1:-3830907 MsG0180000284.01.T01:CDS
AAGAAAATCTACAACAACGT+GGG 0.641819 1:-3830917 MsG0180000284.01.T01:CDS
GAAGAAAATCTACAACAACG+TGG 0.766530 1:-3830918 MsG0180000284.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAACAATTACAATAA+GGG - Chr1:3830800-3830819 MsG0180000284.01.T01:CDS 10.0%
!! AAAATAACAATTACAATAAG+GGG - Chr1:3830801-3830820 MsG0180000284.01.T01:CDS 15.0%
!! CAAAAATAACAATTACAATA+AGG - Chr1:3830799-3830818 MsG0180000284.01.T01:CDS 15.0%
!!! TGTTATTTTTGTGATCTACA+GGG + Chr1:3830790-3830809 None:intergenic 25.0%
!!! TTGTTATTTTTGTGATCTAC+AGG + Chr1:3830791-3830810 None:intergenic 25.0%
AAAGCTATGAAACCATATAG+AGG - Chr1:3830839-3830858 MsG0180000284.01.T01:CDS 30.0%
AAGAAAATCTACAACAACGT+GGG - Chr1:3831056-3831075 MsG0180000284.01.T01:CDS 30.0%
AAGAGATCAAGAATTTGGTT+AGG - Chr1:3830914-3830933 MsG0180000284.01.T01:CDS 30.0%
CAAACAAGAGATCAAGAATT+TGG - Chr1:3830909-3830928 MsG0180000284.01.T01:CDS 30.0%
CAAATTCTTGATCTCTTGTT+TGG + Chr1:3830911-3830930 None:intergenic 30.0%
TGAAACCATATAGAGGAATA+AGG - Chr1:3830846-3830865 MsG0180000284.01.T01:CDS 30.0%
! GATTTTCTTCATCTTCTTGT+TGG + Chr1:3831045-3831064 None:intergenic 30.0%
!! ACAACAGTTCTGGAAAATTA+AGG + Chr1:3831015-3831034 None:intergenic 30.0%
AGGAAAAAAGCTACACAAGT+TGG - Chr1:3831100-3831119 MsG0180000284.01.T01:CDS 35.0%
AGGAATAAGGATGAGAAAGT+GGG - Chr1:3830859-3830878 MsG0180000284.01.T01:CDS 35.0%
CTCATCCTTATTCCTCTATA+TGG + Chr1:3830854-3830873 None:intergenic 35.0%
CTTGGAGTGAACATGATTAT+TGG + Chr1:3831185-3831204 None:intergenic 35.0%
GAAGAAAATCTACAACAACG+TGG - Chr1:3831055-3831074 MsG0180000284.01.T01:CDS 35.0%
GGAAAATTAAGGTTTGCAGA+AGG + Chr1:3831004-3831023 None:intergenic 35.0%
TTTGAGAGAAGAAGTAGACT+TGG + Chr1:3831203-3831222 None:intergenic 35.0%
TTTGGAAACTCATTCAAGTC+AGG + Chr1:3831226-3831245 None:intergenic 35.0%
TTTGTGATCTACAGGGATAT+TGG + Chr1:3830783-3830802 None:intergenic 35.0%
! ACTGCTGTGTTTTATCTTAG+AGG - Chr1:3830977-3830996 MsG0180000284.01.T01:CDS 35.0%
! ATATGTCGGCTGATTCAATA+AGG - Chr1:3831080-3831099 MsG0180000284.01.T01:CDS 35.0%
ACAACAACGTGGGAATATGT+CGG - Chr1:3831066-3831085 MsG0180000284.01.T01:CDS 40.0%
GAGGAATAAGGATGAGAAAG+TGG - Chr1:3830858-3830877 MsG0180000284.01.T01:CDS 40.0%
GGAATAAGGATGAGAAAGTG+GGG - Chr1:3830860-3830879 MsG0180000284.01.T01:CDS 40.0%
TGGTCTTTGAACAACAGTTC+TGG + Chr1:3831025-3831044 None:intergenic 40.0%
GATGAGAAAGTGGGGTAAGT+GGG - Chr1:3830868-3830887 MsG0180000284.01.T01:CDS 45.0%
GGATGAGAAAGTGGGGTAAG+TGG - Chr1:3830867-3830886 MsG0180000284.01.T01:CDS 50.0%
TAAGCACGTGCTGCAGCAAT+AGG + Chr1:3830953-3830972 None:intergenic 50.0%
GAGAAAGTGGGGTAAGTGGG+TGG - Chr1:3830871-3830890 MsG0180000284.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr1 gene 3830734 3831261 3830734 ID=MsG0180000284.01;Name=MsG0180000284.01
Chr1 mRNA 3830734 3831261 3830734 ID=MsG0180000284.01.T01;Parent=MsG0180000284.01;Name=MsG0180000284.01.T01;_AED=0.31;_eAED=0.31;_QI=0|-1|0|1|-1|1|1|0|175
Chr1 exon 3830734 3831261 3830734 ID=MsG0180000284.01.T01:exon:5850;Parent=MsG0180000284.01.T01
Chr1 CDS 3830734 3831261 3830734 ID=MsG0180000284.01.T01:cds;Parent=MsG0180000284.01.T01
Gene Sequence

>MsG0180000284.01.T01

ATGGAAGAAGAAGATAGGGAATATTGTTGTTCGATGAATTCAAGAACCAATATCCCTGTAGATCACAAAAATAACAATTACAATAAGGGGATGAAAAAAGAGAAAAAAGCTATGAAACCATATAGAGGAATAAGGATGAGAAAGTGGGGTAAGTGGGTGGCAGAGATTAGAGAACCAAACAAGAGATCAAGAATTTGGTTAGGTTCTTACATAACACCTATTGCTGCAGCACGTGCTTATGATACTGCTGTGTTTTATCTTAGAGGTCCTTCTGCAAACCTTAATTTTCCAGAACTGTTGTTCAAAGACCAACAAGAAGATGAAGAAAATCTACAACAACGTGGGAATATGTCGGCTGATTCAATAAGGAAAAAAGCTACACAAGTTGGTGCTAGAGTTGATGCTATTGAAACTAATTCTCTAATTAATCATCATCATCATGTTTCTTCCAATAATCATGTTCACTCCAAGTCTACTTCTTCTCTCAAACCTGACTTGAATGAGTTTCCAAAACCTGAAGATTGTTGA

Protein sequence

>MsG0180000284.01.T01

MEEEDREYCCSMNSRTNIPVDHKNNNYNKGMKKEKKAMKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYITPIAAARAYDTAVFYLRGPSANLNFPELLFKDQQEDEENLQQRGNMSADSIRKKATQVGARVDAIETNSLINHHHHVSSNNHVHSKSTSSLKPDLNEFPKPEDC*