Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028416.01.T01 | AGQ42776.1 | 98.784 | 329 | 4 | 0 | 1 | 329 | 1 | 329 | 0 | 685 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028416.01.T01 | O03376 | 84.242 | 330 | 47 | 4 | 1 | 329 | 1 | 326 | 0 | 582 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028416.01.T01 | S5FR94 | 98.784 | 329 | 4 | 0 | 1 | 329 | 1 | 329 | 0.0 | 685 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048177.01 | MsG0580028416.01 | 0.866972 | 1.927792e-65 | 6.620727e-62 |
| MsG0080048178.01 | MsG0580028416.01 | 0.823093 | 1.667726e-53 | 1.422093e-50 |
| MsG0080048204.01 | MsG0580028416.01 | 0.803755 | 2.995840e-49 | 1.517825e-46 |
| MsG0080048205.01 | MsG0580028416.01 | 0.831737 | 1.408526e-55 | 1.542314e-52 |
| MsG0080048207.01 | MsG0580028416.01 | 0.827393 | 1.603399e-54 | 1.546116e-51 |
| MsG0180000089.01 | MsG0580028416.01 | 0.823283 | 1.505531e-53 | 1.290634e-50 |
| MsG0180000222.01 | MsG0580028416.01 | 0.873172 | 1.806073e-67 | 7.763042e-64 |
| MsG0180000391.01 | MsG0580028416.01 | 0.810577 | 1.075702e-50 | 6.508249e-48 |
| MsG0180000428.01 | MsG0580028416.01 | 0.831944 | 1.252441e-55 | 1.379744e-52 |
| MsG0180000645.01 | MsG0580028416.01 | 0.821658 | 3.591781e-53 | 2.940196e-50 |
| MsG0180000673.01 | MsG0580028416.01 | 0.845868 | 3.104602e-59 | 5.246631e-56 |
| MsG0180001043.01 | MsG0580028416.01 | 0.825936 | 3.571874e-54 | 3.302423e-51 |
| MsG0180001391.01 | MsG0580028416.01 | 0.813149 | 2.961719e-51 | 1.918869e-48 |
| MsG0180001453.01 | MsG0580028416.01 | 0.800224 | 1.593316e-48 | 7.378752e-46 |
| MsG0180001921.01 | MsG0580028416.01 | 0.801481 | 8.821971e-49 | 4.217707e-46 |
| MsG0180001922.01 | MsG0580028416.01 | 0.837802 | 4.192234e-57 | 5.507494e-54 |
| MsG0180002912.01 | MsG0580028416.01 | 0.816101 | 6.576658e-52 | 4.617588e-49 |
| MsG0180003190.01 | MsG0580028416.01 | 0.804219 | 2.399641e-49 | 1.230275e-46 |
| MsG0180003241.01 | MsG0580028416.01 | 0.850850 | 1.300849e-60 | 2.582881e-57 |
| MsG0180004162.01 | MsG0580028416.01 | 0.807270 | 5.486697e-50 | 3.042775e-47 |
| MsG0180004444.01 | MsG0580028416.01 | 0.819919 | 9.016686e-53 | 7.032770e-50 |
| MsG0180004947.01 | MsG0580028416.01 | 0.848542 | 5.736463e-60 | 1.056276e-56 |
| MsG0180004986.01 | MsG0580028416.01 | 0.820748 | 5.820868e-53 | 4.645567e-50 |
| MsG0180005006.01 | MsG0580028416.01 | 0.831652 | 1.478661e-55 | 1.614808e-52 |
| MsG0180005125.01 | MsG0580028416.01 | 0.835490 | 1.627664e-56 | 1.993512e-53 |
| MsG0180005172.01 | MsG0580028416.01 | 0.804748 | 1.861382e-49 | 9.675181e-47 |
| MsG0180005331.01 | MsG0580028416.01 | 0.802077 | 6.656506e-49 | 3.230828e-46 |
| MsG0180005949.01 | MsG0580028416.01 | 0.813031 | 3.144068e-51 | 2.030637e-48 |
| MsG0180005996.01 | MsG0580028416.01 | 0.809755 | 1.617926e-50 | 9.579976e-48 |
| MsG0180006016.01 | MsG0580028416.01 | 0.836037 | 1.183204e-56 | 1.473122e-53 |
| MsG0180006047.01 | MsG0580028416.01 | 0.864599 | 1.083024e-64 | 3.419818e-61 |
| MsG0280006356.01 | MsG0580028416.01 | 0.827464 | 1.541927e-54 | 1.489798e-51 |
| MsG0280010784.01 | MsG0580028416.01 | 0.835051 | 2.101721e-56 | 2.540297e-53 |
| MsG0280011053.01 | MsG0580028416.01 | 0.843729 | 1.171461e-58 | 1.849685e-55 |
| MsG0280011131.01 | MsG0580028416.01 | 0.802290 | 6.017847e-49 | 2.936834e-46 |
| MsG0280011144.01 | MsG0580028416.01 | 0.800563 | 1.359172e-48 | 6.348720e-46 |
| MsG0280011152.01 | MsG0580028416.01 | 0.808755 | 2.649713e-50 | 1.527619e-47 |
| MsG0280011235.01 | MsG0580028416.01 | 0.827699 | 1.354618e-54 | 1.317632e-51 |
| MsG0280011288.01 | MsG0580028416.01 | 0.809145 | 2.186693e-50 | 1.273904e-47 |
| MsG0280011473.01 | MsG0580028416.01 | 0.811346 | 7.330700e-51 | 4.526445e-48 |
| MsG0380011754.01 | MsG0580028416.01 | 0.818954 | 1.496488e-52 | 1.136377e-49 |
| MsG0380013047.01 | MsG0580028416.01 | 0.837815 | 4.159398e-57 | 5.466512e-54 |
| MsG0380013436.01 | MsG0580028416.01 | 0.801957 | 7.044431e-49 | 3.408622e-46 |
| MsG0380014561.01 | MsG0580028416.01 | 0.815194 | 1.047451e-51 | 7.173088e-49 |
| MsG0380014913.01 | MsG0580028416.01 | 0.826370 | 2.816642e-54 | 2.636484e-51 |
| MsG0380014920.01 | MsG0580028416.01 | 0.839384 | 1.636243e-57 | 2.256063e-54 |
| MsG0480018500.01 | MsG0580028416.01 | 0.808820 | 2.566990e-50 | 1.482450e-47 |
| MsG0480018904.01 | MsG0580028416.01 | 0.846047 | 2.775451e-59 | 4.717248e-56 |
| MsG0480019880.01 | MsG0580028416.01 | 0.816281 | 5.994499e-52 | 4.229694e-49 |
| MsG0480020225.01 | MsG0580028416.01 | 0.822258 | 2.607707e-53 | 2.171511e-50 |
| MsG0480020444.01 | MsG0580028416.01 | 0.802417 | 5.666821e-49 | 2.774527e-46 |
| MsG0480020445.01 | MsG0580028416.01 | 0.844749 | 6.232973e-59 | 1.016221e-55 |
| MsG0480020487.01 | MsG0580028416.01 | 0.834703 | 2.571297e-56 | 3.075264e-53 |
| MsG0480020843.01 | MsG0580028416.01 | 0.817191 | 3.748353e-52 | 2.711224e-49 |
| MsG0480021695.01 | MsG0580028416.01 | 0.816360 | 5.756879e-52 | 4.070623e-49 |
| MsG0480022752.01 | MsG0580028416.01 | 0.817902 | 2.591233e-52 | 1.911192e-49 |
| MsG0480023088.01 | MsG0580028416.01 | 0.829052 | 6.388006e-55 | 6.463492e-52 |
| MsG0480023174.01 | MsG0580028416.01 | 0.801711 | 7.916791e-49 | 3.806810e-46 |
| MsG0480023224.01 | MsG0580028416.01 | 0.819849 | 9.357870e-53 | 7.284251e-50 |
| MsG0480023245.01 | MsG0580028416.01 | 0.803035 | 4.225045e-49 | 2.101252e-46 |
| MsG0480023280.01 | MsG0580028416.01 | 0.838759 | 2.375743e-57 | 3.213398e-54 |
| MsG0480023417.01 | MsG0580028416.01 | 0.842662 | 2.254400e-58 | 3.441987e-55 |
| MsG0480023517.01 | MsG0580028416.01 | 0.862150 | 6.214310e-64 | 1.801723e-60 |
| MsG0480023923.01 | MsG0580028416.01 | 0.801171 | 1.020981e-48 | 4.843157e-46 |
| MsG0580024204.01 | MsG0580028416.01 | 0.809967 | 1.456166e-50 | 8.670122e-48 |
| MsG0580024205.01 | MsG0580028416.01 | 0.830868 | 2.304194e-55 | 2.458583e-52 |
| MsG0580024407.01 | MsG0580028416.01 | 0.804092 | 2.550525e-49 | 1.303432e-46 |
| MsG0580024910.01 | MsG0580028416.01 | 0.817934 | 2.548427e-52 | 1.881324e-49 |
| MsG0580025278.01 | MsG0580028416.01 | 0.859283 | 4.603285e-63 | 1.209221e-59 |
| MsG0580025328.01 | MsG0580028416.01 | 0.825574 | 4.352493e-54 | 3.982531e-51 |
| MsG0580025338.01 | MsG0580028416.01 | 0.800490 | 1.406417e-48 | 6.557325e-46 |
| MsG0580025453.01 | MsG0580028416.01 | 0.841434 | 4.763848e-58 | 6.999355e-55 |
| MsG0580025497.01 | MsG0580028416.01 | 0.822818 | 1.932417e-53 | 1.635050e-50 |
| MsG0580025563.01 | MsG0580028416.01 | 0.815528 | 8.828651e-52 | 6.101977e-49 |
| MsG0580025769.01 | MsG0580028416.01 | 0.809480 | 1.853194e-50 | 1.089280e-47 |
| MsG0580026011.01 | MsG0580028416.01 | 0.830286 | 3.198703e-55 | 3.355258e-52 |
| MsG0380015686.01 | MsG0580028416.01 | 0.823404 | 1.410342e-53 | 1.213074e-50 |
| MsG0380015931.01 | MsG0580028416.01 | 0.853625 | 2.111787e-61 | 4.591541e-58 |
| MsG0380015986.01 | MsG0580028416.01 | 0.849319 | 3.490270e-60 | 6.591756e-57 |
| MsG0380017158.01 | MsG0580028416.01 | 0.860561 | 1.895846e-63 | 5.204419e-60 |
| MsG0380017226.01 | MsG0580028416.01 | 0.835025 | 2.133755e-56 | 2.576941e-53 |
| MsG0380017286.01 | MsG0580028416.01 | 0.839001 | 2.056848e-57 | 2.802654e-54 |
| MsG0480018332.01 | MsG0580028416.01 | 0.818772 | 1.646552e-52 | 1.243960e-49 |
| MsG0580026596.01 | MsG0580028416.01 | 0.813479 | 2.506456e-51 | 1.638718e-48 |
| MsG0580027034.01 | MsG0580028416.01 | 0.831225 | 1.883602e-55 | 2.031130e-52 |
| MsG0580027073.01 | MsG0580028416.01 | 0.820835 | 5.558989e-53 | 4.447512e-50 |
| MsG0580027129.01 | MsG0580028416.01 | 0.821633 | 3.640252e-53 | 2.977674e-50 |
| MsG0580027227.01 | MsG0580028416.01 | 0.829694 | 4.460722e-55 | 4.600062e-52 |
| MsG0580027228.01 | MsG0580028416.01 | 0.801087 | 1.062185e-48 | 5.028246e-46 |
| MsG0580027345.01 | MsG0580028416.01 | 0.800768 | 1.234210e-48 | 5.794967e-46 |
| MsG0580027360.01 | MsG0580028416.01 | 0.849862 | 2.461519e-60 | 4.731499e-57 |
| MsG0580028185.01 | MsG0580028416.01 | 0.807671 | 4.511495e-50 | 2.527998e-47 |
| MsG0580028355.01 | MsG0580028416.01 | 0.803443 | 3.477643e-49 | 1.747817e-46 |
| MsG0580028416.01 | MsG0580029691.01 | 0.806135 | 9.527470e-50 | 5.131521e-47 |
| MsG0580028416.01 | MsG0580029758.01 | 0.859743 | 3.348468e-63 | 8.936690e-60 |
| MsG0580028416.01 | MsG0580029906.01 | 0.830817 | 2.372374e-55 | 2.527467e-52 |
| MsG0580028416.01 | MsG0580029930.01 | 0.808010 | 3.820123e-50 | 2.159794e-47 |
| MsG0580028416.01 | MsG0680030841.01 | 0.818022 | 2.434676e-52 | 1.801622e-49 |
| MsG0580028416.01 | MsG0680031538.01 | 0.841434 | 4.763399e-58 | 6.998726e-55 |
| MsG0580028416.01 | MsG0680031802.01 | 0.864468 | 1.190203e-64 | 3.740806e-61 |
| MsG0580028416.01 | MsG0680033951.01 | 0.836834 | 7.419652e-57 | 9.461956e-54 |
| MsG0580028416.01 | MsG0680034190.01 | 0.831446 | 1.661308e-55 | 1.803325e-52 |
| MsG0580028416.01 | MsG0680034450.01 | 0.827397 | 1.600095e-54 | 1.543094e-51 |
| MsG0580028416.01 | MsG0680034672.01 | 0.802588 | 5.223450e-49 | 2.568529e-46 |
| MsG0580028416.01 | MsG0680035460.01 | 0.819110 | 1.379679e-52 | 1.052086e-49 |
| MsG0580028416.01 | MsG0780036291.01 | 0.802382 | 5.761104e-49 | 2.818214e-46 |
| MsG0580028416.01 | MsG0780036854.01 | 0.846761 | 1.772652e-59 | 3.083275e-56 |
| MsG0580028416.01 | MsG0780037258.01 | 0.828447 | 8.945420e-55 | 8.894089e-52 |
| MsG0580028416.01 | MsG0780037415.01 | 0.824082 | 9.787635e-54 | 8.581895e-51 |
| MsG0580028416.01 | MsG0780038135.01 | 0.853495 | 2.300852e-61 | 4.981123e-58 |
| MsG0580028416.01 | MsG0780038444.01 | 0.859678 | 3.502639e-63 | 9.326920e-60 |
| MsG0580028416.01 | MsG0780038921.01 | 0.838749 | 2.390334e-57 | 3.231969e-54 |
| MsG0580028416.01 | MsG0780038925.01 | 0.836149 | 1.108271e-56 | 1.384621e-53 |
| MsG0580028416.01 | MsG0780038930.01 | 0.854109 | 1.531995e-61 | 3.385162e-58 |
| MsG0580028416.01 | MsG0780039875.01 | 0.813080 | 3.067305e-51 | 1.983559e-48 |
| MsG0580028416.01 | MsG0780039966.01 | 0.804821 | 1.797486e-49 | 9.360470e-47 |
| MsG0580028416.01 | MsG0780040442.01 | 0.805093 | 1.576468e-49 | 8.266776e-47 |
| MsG0580028416.01 | MsG0780040505.01 | 0.842189 | 3.010823e-58 | 4.528958e-55 |
| MsG0580028416.01 | MsG0780040516.01 | 0.834898 | 2.296078e-56 | 2.762534e-53 |
| MsG0580028416.01 | MsG0780040609.01 | 0.806841 | 6.761785e-50 | 3.708385e-47 |
| MsG0580028416.01 | MsG0780040679.01 | 0.870513 | 1.378331e-66 | 5.376223e-63 |
| MsG0580028416.01 | MsG0780040758.01 | 0.824041 | 1.000321e-53 | 8.760408e-51 |
| MsG0580028416.01 | MsG0780041357.01 | 0.817937 | 2.544224e-52 | 1.878361e-49 |
| MsG0580028416.01 | MsG0880041985.01 | 0.874381 | 7.059802e-68 | 3.171176e-64 |
| MsG0580028416.01 | MsG0880042811.01 | 0.817469 | 3.244735e-52 | 2.365153e-49 |
| MsG0580028416.01 | MsG0880042843.01 | 0.875199 | 3.720464e-68 | 1.722411e-64 |
| MsG0580028416.01 | MsG0880042960.01 | 0.812343 | 4.447603e-51 | 2.820736e-48 |
| MsG0580028416.01 | MsG0880043001.01 | 0.859728 | 3.382417e-63 | 9.022763e-60 |
| MsG0580028416.01 | MsG0880043082.01 | 0.821894 | 3.168166e-53 | 2.610953e-50 |
| MsG0580028416.01 | MsG0880043094.01 | 0.800659 | 1.299268e-48 | 6.083859e-46 |
| MsG0580028416.01 | MsG0880043286.01 | 0.814833 | 1.259517e-51 | 8.541655e-49 |
| MsG0580028416.01 | MsG0880043288.01 | 0.821757 | 3.407837e-53 | 2.797385e-50 |
| MsG0580028416.01 | MsG0880043415.01 | 0.816035 | 6.804692e-52 | 4.769031e-49 |
| MsG0580028416.01 | MsG0880043835.01 | 0.805397 | 1.361774e-49 | 7.196794e-47 |
| MsG0580028416.01 | MsG0880044039.01 | 0.805952 | 1.040925e-49 | 5.580425e-47 |
| MsG0580028416.01 | MsG0880044100.01 | 0.814861 | 1.241491e-51 | 8.425683e-49 |
| MsG0580028416.01 | MsG0880045106.01 | 0.864938 | 8.482775e-65 | 2.710712e-61 |
| MsG0580028416.01 | MsG0880045290.01 | 0.802329 | 5.907451e-49 | 2.885875e-46 |
| MsG0580028416.01 | MsG0880045914.01 | 0.803368 | 3.603630e-49 | 1.807586e-46 |
| MsG0580028416.01 | MsG0880046058.01 | 0.832997 | 6.868201e-56 | 7.806447e-53 |
| MsG0580028416.01 | MsG0880046113.01 | 0.801357 | 9.356527e-49 | 4.459233e-46 |
| MsG0580028416.01 | MsG0880046209.01 | 0.852872 | 3.472035e-61 | 7.359235e-58 |
| MsG0580028416.01 | MsG0880046226.01 | 0.809465 | 1.867539e-50 | 1.097262e-47 |
| MsG0580028416.01 | MsG0880046244.01 | 0.839692 | 1.361307e-57 | 1.894520e-54 |
| MsG0580028416.01 | MsG0880046329.01 | 0.855242 | 7.192571e-62 | 1.649682e-58 |
| MsG0580028416.01 | MsG0880046395.01 | 0.802659 | 5.050892e-49 | 2.488075e-46 |
| MsG0580028416.01 | MsG0880046467.01 | 0.803060 | 4.175133e-49 | 2.077713e-46 |
| MsG0580028416.01 | MsG0880046586.01 | 0.837954 | 3.830662e-57 | 5.056031e-54 |
| MsG0580028416.01 | MsG0880046642.01 | 0.861121 | 1.281885e-63 | 3.587543e-60 |
| MsG0580028416.01 | MsG0880046731.01 | 0.811212 | 7.839118e-51 | 4.823674e-48 |
| MsG0580028416.01 | MsG0880046733.01 | 0.811227 | 7.779757e-51 | 4.788964e-48 |
| MsG0580028416.01 | MsG0880046888.01 | 0.804671 | 1.931279e-49 | 1.001786e-46 |
| MsG0580028416.01 | MsG0880047019.01 | 0.824768 | 6.747777e-54 | 6.034770e-51 |
| MsG0580028416.01 | MsG0880047143.01 | 0.805629 | 1.217401e-49 | 6.472389e-47 |
| MsG0580028416.01 | MsG0880047497.01 | 0.800745 | 1.248022e-48 | 5.856407e-46 |
| MsG0580028416.01 | MsG0880047590.01 | 0.814597 | 1.420855e-51 | 9.574886e-49 |
| MsG0280006936.01 | MsG0580028416.01 | 0.811098 | 8.295232e-51 | 5.089048e-48 |
| MsG0280007272.01 | MsG0580028416.01 | 0.907277 | 6.031465e-81 | 1.062528e-76 |
| MsG0280007351.01 | MsG0580028416.01 | 0.810951 | 8.928272e-51 | 5.456642e-48 |
| MsG0280007369.01 | MsG0580028416.01 | 0.848460 | 6.045327e-60 | 1.110274e-56 |
| MsG0280007391.01 | MsG0580028416.01 | 0.855724 | 5.207394e-62 | 1.213724e-58 |
| MsG0280007439.01 | MsG0580028416.01 | 0.807288 | 5.438680e-50 | 3.017546e-47 |
| MsG0280007481.01 | MsG0580028416.01 | 0.824490 | 7.847683e-54 | 6.961472e-51 |
| MsG0280007549.01 | MsG0580028416.01 | 0.868267 | 7.411754e-66 | 2.664717e-62 |
| MsG0280007714.01 | MsG0580028416.01 | 0.834310 | 3.227083e-56 | 3.815215e-53 |
| MsG0280008220.01 | MsG0580028416.01 | 0.822981 | 1.771037e-53 | 1.505419e-50 |
| MsG0280008286.01 | MsG0580028416.01 | 0.800033 | 1.742732e-48 | 8.031498e-46 |
| MsG0280008295.01 | MsG0580028416.01 | 0.813270 | 2.786292e-51 | 1.811189e-48 |
| MsG0280008907.01 | MsG0580028416.01 | 0.809842 | 1.549004e-50 | 9.192903e-48 |
| MsG0280009235.01 | MsG0580028416.01 | 0.833039 | 6.705194e-56 | 7.630574e-53 |
| MsG0280009838.01 | MsG0580028416.01 | 0.808473 | 3.044178e-50 | 1.742232e-47 |
| MsG0280009899.01 | MsG0580028416.01 | 0.808044 | 3.756938e-50 | 2.125922e-47 |
| MsG0280010276.01 | MsG0580028416.01 | -0.814640 | 1.390169e-51 | 9.379123e-49 |
| MsG0280010416.01 | MsG0580028416.01 | 0.852195 | 5.413350e-61 | 1.122471e-57 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0580028416.01 | MsG0580025338.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028416.01.T01 | MTR_5g070870 | 94.225 | 329 | 14 | 1 | 1 | 329 | 1 | 324 | 0.0 | 626 |
| MsG0580028416.01.T01 | MTR_5g070680 | 90.578 | 329 | 25 | 2 | 1 | 329 | 1 | 323 | 0.0 | 619 |
| MsG0580028416.01.T01 | MTR_4g094222 | 69.811 | 318 | 85 | 3 | 22 | 329 | 29 | 345 | 3.54e-166 | 466 |
| MsG0580028416.01.T01 | MTR_5g026620 | 63.830 | 282 | 99 | 1 | 51 | 329 | 49 | 330 | 3.15e-140 | 400 |
| MsG0580028416.01.T01 | MTR_5g026620 | 71.239 | 226 | 65 | 0 | 104 | 329 | 37 | 262 | 6.30e-125 | 358 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028416.01.T01 | AT5G64210 | 67.241 | 290 | 87 | 3 | 44 | 329 | 68 | 353 | 1.70e-148 | 422 |
| MsG0580028416.01.T01 | AT3G22370 | 66.788 | 274 | 91 | 0 | 56 | 329 | 81 | 354 | 3.44e-145 | 414 |
| MsG0580028416.01.T01 | AT3G22360 | 64.748 | 278 | 98 | 0 | 52 | 329 | 48 | 325 | 5.85e-142 | 404 |
| MsG0580028416.01.T01 | AT3G27620 | 66.923 | 260 | 86 | 0 | 70 | 329 | 70 | 329 | 7.46e-138 | 394 |
| MsG0580028416.01.T01 | AT1G32350 | 58.044 | 317 | 127 | 1 | 19 | 329 | 2 | 318 | 2.00e-136 | 390 |
| MsG0580028416.01.T01 | AT1G32350 | 57.047 | 298 | 122 | 1 | 19 | 310 | 2 | 299 | 1.00e-124 | 360 |
| MsG0580028416.01.T01 | AT4G22260 | 30.570 | 193 | 110 | 5 | 131 | 302 | 110 | 299 | 7.31e-14 | 72.0 |
Find 80 sgRNAs with CRISPR-Local
Find 135 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTATACATGCAACAAATTT+TGG | 0.107684 | 5:+80276898 | MsG0580028417.01.T01:intron |
| CTGCTATTGCTATTGATTAT+TGG | 0.140551 | 5:-80275099 | MsG0580028416.01.T01:CDS |
| ATGAATACTGGTAAACTTTC+AGG | 0.172842 | 5:+80274337 | MsG0580028417.01.T01:intron |
| ACATAGGTTTGTTGGTTATT+TGG | 0.199576 | 5:-80275197 | MsG0580028416.01.T01:CDS |
| CCTTCCTCGACCTTTCTTCT+TGG | 0.219102 | 5:-80276991 | MsG0580028416.01.T01:five_prime_UTR |
| TCAGATCTGTCAAGTTTCTA+AGG | 0.232736 | 5:-80275818 | MsG0580028416.01.T01:CDS |
| ACGCCGTTGTTTCGAGTTAC+TGG | 0.248772 | 5:-80276593 | MsG0580028416.01.T01:CDS |
| TATTTACTTTAGGAACGATA+TGG | 0.332787 | 5:-80275487 | MsG0580028416.01.T01:intron |
| AGCATCCCTCCCACCATTCC+AGG | 0.354203 | 5:+80275427 | MsG0580028417.01.T01:intron |
| GCTCTCTGATTTGTACTTCA+AGG | 0.392316 | 5:-80275793 | MsG0580028416.01.T01:intron |
| CAGTAGGCCTAAGGTTCTTA+AGG | 0.396717 | 5:-80276565 | MsG0580028416.01.T01:CDS |
| AAGTTGGCATGAAAGGCTTT+TGG | 0.400981 | 5:-80275287 | MsG0580028416.01.T01:CDS |
| CGCCGTTGTTTCGAGTTACT+GGG | 0.409023 | 5:-80276592 | MsG0580028416.01.T01:CDS |
| TCCTAAGGATGCAACTCTTA+AGG | 0.422607 | 5:-80275071 | MsG0580028416.01.T01:CDS |
| CGAGCTTTGTTCCGCAGTGG+TGG | 0.429833 | 5:-80276789 | MsG0580028416.01.T01:CDS |
| GTGCTGATGAGGCTCATCAT+AGG | 0.433399 | 5:-80275030 | MsG0580028416.01.T01:CDS |
| AGATATTGTGTAATGAATAC+TGG | 0.440402 | 5:+80274325 | MsG0580028417.01.T01:intron |
| GTGCTTGTGGAAGCTTGTAC+TGG | 0.442938 | 5:-80276701 | MsG0580028416.01.T01:CDS |
| TGTTGGTTATTTGGAGGAAG+AGG | 0.444234 | 5:-80275188 | MsG0580028416.01.T01:CDS |
| AAAACAGCACATAGGTTTGT+TGG | 0.451661 | 5:-80275205 | MsG0580028416.01.T01:CDS |
| AAAAGCCTTTCATGCCAACT+TGG | 0.452120 | 5:+80275289 | MsG0580028417.01.T01:intron |
| TGAAACCAAGTTGGCATGAA+AGG | 0.472407 | 5:-80275294 | MsG0580028416.01.T01:CDS |
| TCCTTAAGAGTTGCATCCTT+AGG | 0.476176 | 5:+80275070 | MsG0580028417.01.T01:intron |
| CAGATCTGTCAAGTTTCTAA+GGG | 0.482561 | 5:-80275817 | MsG0580028416.01.T01:CDS |
| TTGTAGGATATTCACCATCA+AGG | 0.489202 | 5:-80274508 | MsG0580028416.01.T01:intron |
| CAATGATAACCAACAGGAGC+TGG | 0.493882 | 5:+80274466 | MsG0580028417.01.T01:intron |
| TGATTATTGGAGACTTCCTA+AGG | 0.494224 | 5:-80275086 | MsG0580028416.01.T01:CDS |
| CCATCCTCCTTAAGAACCTT+AGG | 0.498410 | 5:+80276558 | MsG0580028417.01.T01:intron |
| CACTGTTATTCGTGCTGATG+AGG | 0.498752 | 5:-80275041 | MsG0580028416.01.T01:CDS |
| CATTTAAATGCAATTGAAAG+TGG | 0.502291 | 5:-80275145 | MsG0580028416.01.T01:CDS |
| GAAACAATAGCAGCTGTCCC+TGG | 0.502375 | 5:-80275445 | MsG0580028416.01.T01:CDS |
| GTGGCCATGGAACTGCTTCA+TGG | 0.504226 | 5:-80276529 | MsG0580028416.01.T01:intron |
| AATTTCAACACGCTGGTGGT+TGG | 0.504805 | 5:-80275381 | MsG0580028416.01.T01:CDS |
| TTGGAGTTACCTTGTCCTTG+TGG | 0.506908 | 5:-80276972 | MsG0580028416.01.T01:five_prime_UTR |
| ATGACTCAATGATAACCAAC+AGG | 0.508368 | 5:+80274460 | MsG0580028417.01.T01:intron |
| CGAGTTACTGGGGTATCAGT+AGG | 0.516108 | 5:-80276581 | MsG0580028416.01.T01:CDS |
| TTGAAGAAGCAGAGAATGAA+AGG | 0.517469 | 5:-80275345 | MsG0580028416.01.T01:CDS |
| AGGATGGAACTGAGTGGCCA+TGG | 0.518415 | 5:-80276542 | MsG0580028416.01.T01:CDS |
| TGCTGATGAGGCTCATCATA+GGG | 0.523825 | 5:-80275029 | MsG0580028416.01.T01:CDS |
| CCTAAGGTTCTTAAGGAGGA+TGG | 0.531919 | 5:-80276558 | MsG0580028416.01.T01:CDS |
| TAGGTTTGTTGGTTATTTGG+AGG | 0.534495 | 5:-80275194 | MsG0580028416.01.T01:CDS |
| AGCAGCTGTCCCTGGAATGG+TGG | 0.537892 | 5:-80275437 | MsG0580028416.01.T01:CDS |
| CAGCATGGCGGTGGTGCTTG+TGG | 0.537975 | 5:-80276714 | MsG0580028416.01.T01:CDS |
| CTGTCCCTGGAATGGTGGGA+GGG | 0.543809 | 5:-80275432 | MsG0580028416.01.T01:CDS |
| CTGGGGTATCAGTAGGCCTA+AGG | 0.544437 | 5:-80276574 | MsG0580028416.01.T01:CDS |
| CCGCCATGCTGATGTTGTCT+CGG | 0.548514 | 5:+80276726 | MsG0580028417.01.T01:intron |
| AGACAACATCAGCATGGCGG+TGG | 0.550470 | 5:-80276723 | MsG0580028416.01.T01:CDS |
| CAATAATCAATAGCAATAGC+AGG | 0.550641 | 5:+80275100 | MsG0580028417.01.T01:intron |
| TCAATAGCAATAGCAGGAGC+AGG | 0.557374 | 5:+80275106 | MsG0580028417.01.T01:intron |
| AAAGAGGCTCCAGCTCCTGT+TGG | 0.560458 | 5:-80274475 | MsG0580028416.01.T01:CDS |
| AGAAAATTTCAACACGCTGG+TGG | 0.561109 | 5:-80275385 | MsG0580028416.01.T01:CDS |
| GAGCTTTGTTCCGCAGTGGT+GGG | 0.563025 | 5:-80276788 | MsG0580028416.01.T01:CDS |
| TCAAGGAAAAGAATTGAAAG+AGG | 0.563176 | 5:-80274491 | MsG0580028416.01.T01:CDS |
| CAAGGTAACTCCAAGAAGAA+AGG | 0.563616 | 5:+80276981 | MsG0580028417.01.T01:intron |
| CTTACCATGAAGCAGTTCCA+TGG | 0.568629 | 5:+80276525 | MsG0580028417.01.T01:intron |
| AATAGCAGCTGTCCCTGGAA+TGG | 0.571632 | 5:-80275440 | MsG0580028416.01.T01:CDS |
| AACTCCAAGAAGAAAGGTCG+AGG | 0.579967 | 5:+80276987 | MsG0580028417.01.T01:intron |
| GTGGAAGCTTGTACTGGCAG+AGG | 0.584497 | 5:-80276695 | MsG0580028416.01.T01:CDS |
| GCTGTCCCTGGAATGGTGGG+AGG | 0.588333 | 5:-80275433 | MsG0580028416.01.T01:CDS |
| GCAGCTGTCCCTGGAATGGT+GGG | 0.590768 | 5:-80275436 | MsG0580028416.01.T01:CDS |
| CCAAGAAGAAAGGTCGAGGA+AGG | 0.596141 | 5:+80276991 | MsG0580028417.01.T01:intron |
| TCAACTTTGTGTTTGCCACA+AGG | 0.597892 | 5:+80276957 | MsG0580028417.01.T01:intron |
| TTGTGTTTGCCACAAGGACA+AGG | 0.607869 | 5:+80276963 | MsG0580028417.01.T01:intron |
| CTAAGAAAATTTCAACACGC+TGG | 0.618947 | 5:-80275388 | MsG0580028416.01.T01:CDS |
| GCATCCCTCCCACCATTCCA+GGG | 0.622243 | 5:+80275428 | MsG0580028417.01.T01:intron |
| TAGAGCTTGTGAAACCAAGT+TGG | 0.623322 | 5:-80275303 | MsG0580028416.01.T01:CDS |
| ATTGAAAGTTTAGACAACAA+AGG | 0.628890 | 5:+80274413 | MsG0580028417.01.T01:intron |
| GCCGTTGTTTCGAGTTACTG+GGG | 0.628977 | 5:-80276591 | MsG0580028416.01.T01:CDS |
| TCTGAACTGTAACTTTCCCA+TGG | 0.639567 | 5:+80275900 | MsG0580028417.01.T01:intron |
| AGGTCGAGGAAGGTTTCATG+TGG | 0.643294 | 5:+80277001 | MsG0580028417.01.T01:intron |
| GGATGTCAATCACTTTGCGT+CGG | 0.643344 | 5:-80275008 | MsG0580028416.01.T01:intron |
| TTGTTTCGAGCATCATTGCG+TGG | 0.646519 | 5:+80275461 | MsG0580028417.01.T01:intron |
| GCACGAGCTTTGTTCCGCAG+TGG | 0.647126 | 5:-80276792 | MsG0580028416.01.T01:CDS |
| TAGGCCTAAGGTTCTTAAGG+AGG | 0.663923 | 5:-80276562 | MsG0580028416.01.T01:CDS |
| CAGCCGAGACAACATCAGCA+TGG | 0.676336 | 5:-80276729 | MsG0580028416.01.T01:CDS |
| ACCCCAGTAACTCGAAACAA+CGG | 0.693976 | 5:+80276590 | MsG0580028417.01.T01:intron |
| AAGGATGCATTTGATGACAA+TGG | 0.707267 | 5:-80275326 | MsG0580028416.01.T01:CDS |
| CCGAGACAACATCAGCATGG+CGG | 0.731392 | 5:-80276726 | MsG0580028416.01.T01:CDS |
| TTAAGGAGGATGGAACTGAG+TGG | 0.746044 | 5:-80276548 | MsG0580028416.01.T01:CDS |
| GGTGGTAGTTCCCACCACTG+CGG | 0.755021 | 5:+80276778 | MsG0580028417.01.T01:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTGAATTTTATTTACTTT+AGG | - | Chr5:80275878-80275897 | MsG0580028416.01.T01:CDS | 10.0% |
| !! | AAAACAAAAGTCTATTTATA+AGG | - | Chr5:80276719-80276738 | MsG0580028416.01.T01:CDS | 15.0% |
| !! | ATGAAACATAAAAATTACTT+AGG | - | Chr5:80275670-80275689 | MsG0580028416.01.T01:intron | 15.0% |
| !! | TGAAACATAAAAATTACTTA+GGG | - | Chr5:80275671-80275690 | MsG0580028416.01.T01:intron | 15.0% |
| !!! | ACATTTTCTCAAAAAAAAAA+TGG | - | Chr5:80276749-80276768 | MsG0580028416.01.T01:CDS | 15.0% |
| !!! | GTAAATGTTTTATAACTTTT+TGG | + | Chr5:80274529-80274548 | MsG0580028417.01.T01:intron | 15.0% |
| !!! | TCAATTTAAAGTTAATTCTA+GGG | - | Chr5:80275369-80275388 | MsG0580028416.01.T01:CDS | 15.0% |
| !! | AAAGAATTTATGAAAAAAGC+CGG | + | Chr5:80275058-80275077 | MsG0580028417.01.T01:intron | 20.0% |
| !! | AAATAGATTAAAATCAAGAG+TGG | + | Chr5:80276812-80276831 | MsG0580028417.01.T01:intron | 20.0% |
| !! | AAGAATACATATATAGAAAG+AGG | - | Chr5:80274870-80274889 | MsG0580028416.01.T01:intron | 20.0% |
| !! | TATCATATGAAAGTAATCAA+TGG | + | Chr5:80275190-80275209 | MsG0580028417.01.T01:intron | 20.0% |
| !!! | ACATGAGAAACATTTTAATA+AGG | - | Chr5:80274554-80274573 | MsG0580028416.01.T01:intron | 20.0% |
| !!! | ATGAAGAAAGTTTTTAACAA+AGG | + | Chr5:80275777-80275796 | MsG0580028417.01.T01:intron | 20.0% |
| !!! | CTCAATTTAAAGTTAATTCT+AGG | - | Chr5:80275368-80275387 | MsG0580028416.01.T01:CDS | 20.0% |
| !!! | CTCGAATCAAATTTTTTTAA+TGG | + | Chr5:80275297-80275316 | MsG0580028417.01.T01:intron | 20.0% |
| !!! | TTTATACATGCAACAAATTT+TGG | + | Chr5:80274480-80274499 | MsG0580028417.01.T01:intron | 20.0% |
| ! | ATTGAAAGTTTAGACAACAA+AGG | + | Chr5:80276965-80276984 | MsG0580028417.01.T01:intron | 25.0% |
| ! | CATTTAAATGCAATTGAAAG+TGG | - | Chr5:80276230-80276249 | MsG0580028416.01.T01:intron | 25.0% |
| !! | AAAAAATTTGATTCGAGAGT+TGG | - | Chr5:80275300-80275319 | MsG0580028416.01.T01:CDS | 25.0% |
| !! | AAAACTTTTGACAATATCAC+CGG | - | Chr5:80275036-80275055 | MsG0580028416.01.T01:CDS | 25.0% |
| !! | TATTTACTTTAGGAACGATA+TGG | - | Chr5:80275888-80275907 | MsG0580028416.01.T01:CDS | 25.0% |
| !! | TTTTCTTGGATTGTAATGTT+GGG | + | Chr5:80275724-80275743 | MsG0580028417.01.T01:intron | 25.0% |
| !!! | ATCATTGAGTCATGTTTTTA+TGG | - | Chr5:80276925-80276944 | MsG0580028416.01.T01:five_prime_UTR | 25.0% |
| !!! | TTAATCATACTTTGAAGTCT+CGG | - | Chr5:80276528-80276547 | MsG0580028416.01.T01:intron | 25.0% |
| AAGAATGATGCCAAAAACAA+CGG | - | Chr5:80274748-80274767 | MsG0580028416.01.T01:intron | 30.0% | |
| ATCATGTGCCAAAAACATTT+GGG | - | Chr5:80275521-80275540 | MsG0580028416.01.T01:intron | 30.0% | |
| ATGAATACTGGTAAACTTTC+AGG | + | Chr5:80277041-80277060 | MsG0580028417.01.T01:intron | 30.0% | |
| ATTTGTACTTCAAGGTATGT+GGG | - | Chr5:80275590-80275609 | MsG0580028416.01.T01:intron | 30.0% | |
| CAATAATCAATAGCAATAGC+AGG | + | Chr5:80276278-80276297 | MsG0580028417.01.T01:intron | 30.0% | |
| CATTACAATCCAAGAAAACT+TGG | - | Chr5:80275726-80275745 | MsG0580028416.01.T01:intron | 30.0% | |
| GACACTATAGTTAAAATGCA+AGG | - | Chr5:80276627-80276646 | MsG0580028416.01.T01:CDS | 30.0% | |
| GTATTTGGATGATTTCTCAT+AGG | - | Chr5:80275420-80275439 | MsG0580028416.01.T01:CDS | 30.0% | |
| GTGTGTATTGCTTATAATTG+TGG | - | Chr5:80275835-80275854 | MsG0580028416.01.T01:CDS | 30.0% | |
| TCAAGGAAAAGAATTGAAAG+AGG | - | Chr5:80276884-80276903 | MsG0580028416.01.T01:five_prime_UTR | 30.0% | |
| ! | ATATTGTAGCCAAGTTTTCT+TGG | + | Chr5:80275738-80275757 | MsG0580028417.01.T01:intron | 30.0% |
| ! | CTGCTATTGCTATTGATTAT+TGG | - | Chr5:80276276-80276295 | MsG0580028416.01.T01:intron | 30.0% |
| ! | CTTTCAATTCTTTTCCTTGA+TGG | + | Chr5:80276884-80276903 | MsG0580028417.01.T01:intron | 30.0% |
| ! | GTTTTCTTGGATTGTAATGT+TGG | + | Chr5:80275725-80275744 | MsG0580028417.01.T01:intron | 30.0% |
| ! | TGTTGTGTTCATCTTTTTGT+AGG | - | Chr5:80276851-80276870 | MsG0580028416.01.T01:five_prime_UTR | 30.0% |
| !! | ACATAGGTTTGTTGGTTATT+TGG | - | Chr5:80276178-80276197 | MsG0580028416.01.T01:intron | 30.0% |
| AAAACAGCACATAGGTTTGT+TGG | - | Chr5:80276170-80276189 | MsG0580028416.01.T01:intron | 35.0% | |
| AAAGAGACACTAACTCTGTT+TGG | - | Chr5:80275129-80275148 | MsG0580028416.01.T01:CDS | 35.0% | |
| AACATTCAGAGCAAATGAAG+AGG | + | Chr5:80276835-80276854 | MsG0580028417.01.T01:intron | 35.0% | |
| ATCTCAAAGTTTACGTCAGT+AGG | - | Chr5:80275085-80275104 | MsG0580028416.01.T01:CDS | 35.0% | |
| ATGACTCAATGATAACCAAC+AGG | + | Chr5:80276918-80276937 | MsG0580028417.01.T01:intron | 35.0% | |
| ATGAGTTACTTGATCTTGCA+TGG | - | Chr5:80275393-80275412 | MsG0580028416.01.T01:CDS | 35.0% | |
| CAGATCTGTCAAGTTTCTAA+GGG | - | Chr5:80275558-80275577 | MsG0580028416.01.T01:intron | 35.0% | |
| CATCATGTGCCAAAAACATT+TGG | - | Chr5:80275520-80275539 | MsG0580028416.01.T01:intron | 35.0% | |
| CTAAGAAAATTTCAACACGC+TGG | - | Chr5:80275987-80276006 | MsG0580028416.01.T01:intron | 35.0% | |
| GATTTGTACTTCAAGGTATG+TGG | - | Chr5:80275589-80275608 | MsG0580028416.01.T01:intron | 35.0% | |
| TCAGATCTGTCAAGTTTCTA+AGG | - | Chr5:80275557-80275576 | MsG0580028416.01.T01:intron | 35.0% | |
| TCATGTGCCAAAAACATTTG+GGG | - | Chr5:80275522-80275541 | MsG0580028416.01.T01:intron | 35.0% | |
| TGATTATTGGAGACTTCCTA+AGG | - | Chr5:80276289-80276308 | MsG0580028416.01.T01:intron | 35.0% | |
| TTGAAGAAGCAGAGAATGAA+AGG | - | Chr5:80276030-80276049 | MsG0580028416.01.T01:intron | 35.0% | |
| TTGGCTACAATATGTGTTCT+TGG | - | Chr5:80275745-80275764 | MsG0580028416.01.T01:intron | 35.0% | |
| TTGTAGGATATTCACCATCA+AGG | - | Chr5:80276867-80276886 | MsG0580028416.01.T01:five_prime_UTR | 35.0% | |
| TTTCACCAAAAACAGCACAT+AGG | - | Chr5:80276162-80276181 | MsG0580028416.01.T01:intron | 35.0% | |
| ! | AACTTGTCCCCAAATGTTTT+TGG | + | Chr5:80275532-80275551 | MsG0580028417.01.T01:intron | 35.0% |
| ! | AAGGATGCATTTGATGACAA+TGG | - | Chr5:80276049-80276068 | MsG0580028416.01.T01:intron | 35.0% |
| !! | ATCTTGCATGGTGTTGTATT+TGG | - | Chr5:80275405-80275424 | MsG0580028416.01.T01:CDS | 35.0% |
| !! | CTTTTGGTTATTACTGCACA+AGG | - | Chr5:80276104-80276123 | MsG0580028416.01.T01:intron | 35.0% |
| !! | GCTGTTATTACCGTTGTTTT+TGG | + | Chr5:80274761-80274780 | MsG0580028417.01.T01:intron | 35.0% |
| !! | TAGGTTTGTTGGTTATTTGG+AGG | - | Chr5:80276181-80276200 | MsG0580028416.01.T01:intron | 35.0% |
| !!! | ACAAACCTATGTGCTGTTTT+TGG | + | Chr5:80276170-80276189 | MsG0580028417.01.T01:intron | 35.0% |
| !!! | TATGTGCTGTTTTTGGTGAA+AGG | + | Chr5:80276163-80276182 | MsG0580028417.01.T01:intron | 35.0% |
| AAAAGCCTTTCATGCCAACT+TGG | + | Chr5:80276089-80276108 | MsG0580028417.01.T01:intron | 40.0% | |
| AGAAAATTTCAACACGCTGG+TGG | - | Chr5:80275990-80276009 | MsG0580028416.01.T01:intron | 40.0% | |
| CAAGGTAACTCCAAGAAGAA+AGG | + | Chr5:80274397-80274416 | MsG0580028417.01.T01:intron | 40.0% | |
| GAAAAAAGATCAGCAGACAG+AGG | - | Chr5:80274720-80274739 | MsG0580028416.01.T01:intron | 40.0% | |
| TAGAGCTTGTGAAACCAAGT+TGG | - | Chr5:80276072-80276091 | MsG0580028416.01.T01:intron | 40.0% | |
| TCAACTTTGTGTTTGCCACA+AGG | + | Chr5:80274421-80274440 | MsG0580028417.01.T01:intron | 40.0% | |
| TCCTAAGGATGCAACTCTTA+AGG | - | Chr5:80276304-80276323 | MsG0580028416.01.T01:intron | 40.0% | |
| TCCTTAAGAGTTGCATCCTT+AGG | + | Chr5:80276308-80276327 | MsG0580028417.01.T01:intron | 40.0% | |
| TCTGAACTGTAACTTTCCCA+TGG | + | Chr5:80275478-80275497 | MsG0580028417.01.T01:intron | 40.0% | |
| ! | AAGTTGGCATGAAAGGCTTT+TGG | - | Chr5:80276088-80276107 | MsG0580028416.01.T01:intron | 40.0% |
| ! | ATGATCTTTGTTTGCAGCCA+TGG | - | Chr5:80275458-80275477 | MsG0580028416.01.T01:CDS | 40.0% |
| ! | GCTCTCTGATTTGTACTTCA+AGG | - | Chr5:80275582-80275601 | MsG0580028416.01.T01:intron | 40.0% |
| ! | TGAAACCAAGTTGGCATGAA+AGG | - | Chr5:80276081-80276100 | MsG0580028416.01.T01:intron | 40.0% |
| ! | TGATCTTTGTTTGCAGCCAT+GGG | - | Chr5:80275459-80275478 | MsG0580028416.01.T01:CDS | 40.0% |
| ! | TGTTGGTTATTTGGAGGAAG+AGG | - | Chr5:80276187-80276206 | MsG0580028416.01.T01:intron | 40.0% |
| !!! | GTCTGCTGATCTTTTTTCTC+TGG | + | Chr5:80274718-80274737 | MsG0580028417.01.T01:intron | 40.0% |
| !!! | TGTTTTTGGCACATGATGCT+TGG | + | Chr5:80275518-80275537 | MsG0580028417.01.T01:intron | 40.0% |
| AACTCCAAGAAGAAAGGTCG+AGG | + | Chr5:80274391-80274410 | MsG0580028417.01.T01:intron | 45.0% | |
| AATTTCAACACGCTGGTGGT+TGG | - | Chr5:80275994-80276013 | MsG0580028416.01.T01:intron | 45.0% | |
| ACCCCAGTAACTCGAAACAA+CGG | + | Chr5:80274788-80274807 | MsG0580028417.01.T01:intron | 45.0% | |
| CAATGATAACCAACAGGAGC+TGG | + | Chr5:80276912-80276931 | MsG0580028417.01.T01:intron | 45.0% | |
| CAGTAGGCCTAAGGTTCTTA+AGG | - | Chr5:80274810-80274829 | MsG0580028416.01.T01:intron | 45.0% | |
| CCATCCTCCTTAAGAACCTT+AGG | + | Chr5:80274820-80274839 | MsG0580028417.01.T01:intron | 45.0% | |
| CCTAAGGTTCTTAAGGAGGA+TGG | - | Chr5:80274817-80274836 | MsG0580028416.01.T01:intron | 45.0% | |
| CTTACCATGAAGCAGTTCCA+TGG | + | Chr5:80274853-80274872 | MsG0580028417.01.T01:intron | 45.0% | |
| GGATGTCAATCACTTTGCGT+CGG | - | Chr5:80276367-80276386 | MsG0580028416.01.T01:intron | 45.0% | |
| TAGGCCTAAGGTTCTTAAGG+AGG | - | Chr5:80274813-80274832 | MsG0580028416.01.T01:intron | 45.0% | |
| TCAATAGCAATAGCAGGAGC+AGG | + | Chr5:80276272-80276291 | MsG0580028417.01.T01:intron | 45.0% | |
| TCACCGCTGTTGAAAAACTG+CGG | + | Chr5:80274621-80274640 | MsG0580028417.01.T01:intron | 45.0% | |
| TGCTGATGAGGCTCATCATA+GGG | - | Chr5:80276346-80276365 | MsG0580028416.01.T01:intron | 45.0% | |
| TTAAGGAGGATGGAACTGAG+TGG | - | Chr5:80274827-80274846 | MsG0580028416.01.T01:intron | 45.0% | |
| TTGGAGTTACCTTGTCCTTG+TGG | - | Chr5:80274403-80274422 | MsG0580028416.01.T01:three_prime_UTR | 45.0% | |
| TTGTGTTTGCCACAAGGACA+AGG | + | Chr5:80274415-80274434 | MsG0580028417.01.T01:intron | 45.0% | |
| TTGTTTCGAGCATCATTGCG+TGG | + | Chr5:80275917-80275936 | MsG0580028417.01.T01:intron | 45.0% | |
| ! | CACTGTTATTCGTGCTGATG+AGG | - | Chr5:80276334-80276353 | MsG0580028416.01.T01:intron | 45.0% |
| !!! | TAATATAAGTTTTTTTTTTT+TGG | + | Chr5:80276600-80276619 | MsG0580028417.01.T01:intron | 5.0% |
| !!! | TATTTTTATATATATAGTAA+TGG | + | Chr5:80275647-80275666 | MsG0580028417.01.T01:intron | 5.0% |
| AATAGCAGCTGTCCCTGGAA+TGG | - | Chr5:80275935-80275954 | MsG0580028416.01.T01:intron | 50.0% | |
| AGGTCGAGGAAGGTTTCATG+TGG | + | Chr5:80274377-80274396 | MsG0580028417.01.T01:intron | 50.0% | |
| CCAAGAAGAAAGGTCGAGGA+AGG | + | Chr5:80274387-80274406 | MsG0580028417.01.T01:intron | 50.0% | |
| CCTTCCTCGACCTTTCTTCT+TGG | - | Chr5:80274384-80274403 | MsG0580028416.01.T01:three_prime_UTR | 50.0% | |
| GAAACAATAGCAGCTGTCCC+TGG | - | Chr5:80275930-80275949 | MsG0580028416.01.T01:intron | 50.0% | |
| GTGCTTGTGGAAGCTTGTAC+TGG | - | Chr5:80274674-80274693 | MsG0580028416.01.T01:intron | 50.0% | |
| ! | CGAGTTACTGGGGTATCAGT+AGG | - | Chr5:80274794-80274813 | MsG0580028416.01.T01:intron | 50.0% |
| ! | GTGCTGATGAGGCTCATCAT+AGG | - | Chr5:80276345-80276364 | MsG0580028416.01.T01:intron | 50.0% |
| !! | ACGCCGTTGTTTCGAGTTAC+TGG | - | Chr5:80274782-80274801 | MsG0580028416.01.T01:intron | 50.0% |
| !! | CCACCGCAGTTTTTCAACAG+CGG | - | Chr5:80274615-80274634 | MsG0580028416.01.T01:intron | 50.0% |
| !! | CGCCGTTGTTTCGAGTTACT+GGG | - | Chr5:80274783-80274802 | MsG0580028416.01.T01:intron | 50.0% |
| !! | GCCGTTGTTTCGAGTTACTG+GGG | - | Chr5:80274784-80274803 | MsG0580028416.01.T01:intron | 50.0% |
| AAAGAGGCTCCAGCTCCTGT+TGG | - | Chr5:80276900-80276919 | MsG0580028416.01.T01:five_prime_UTR | 55.0% | |
| AGACAACATCAGCATGGCGG+TGG | - | Chr5:80274652-80274671 | MsG0580028416.01.T01:intron | 55.0% | |
| AGGATGGAACTGAGTGGCCA+TGG | - | Chr5:80274833-80274852 | MsG0580028416.01.T01:intron | 55.0% | |
| CAGCCGAGACAACATCAGCA+TGG | - | Chr5:80274646-80274665 | MsG0580028416.01.T01:intron | 55.0% | |
| CCGAGACAACATCAGCATGG+CGG | - | Chr5:80274649-80274668 | MsG0580028416.01.T01:intron | 55.0% | |
| CCGCCATGCTGATGTTGTCT+CGG | + | Chr5:80274652-80274671 | MsG0580028417.01.T01:intron | 55.0% | |
| CCGCTGTTGAAAAACTGCGG+TGG | + | Chr5:80274618-80274637 | MsG0580028417.01.T01:intron | 55.0% | |
| GTGGCCATGGAACTGCTTCA+TGG | - | Chr5:80274846-80274865 | MsG0580028416.01.T01:intron | 55.0% | |
| ! | CTGGGGTATCAGTAGGCCTA+AGG | - | Chr5:80274801-80274820 | MsG0580028416.01.T01:intron | 55.0% |
| ! | GTGGAAGCTTGTACTGGCAG+AGG | - | Chr5:80274680-80274699 | MsG0580028416.01.T01:intron | 55.0% |
| !! | GAGCTTTGTTCCGCAGTGGT+GGG | - | Chr5:80274587-80274606 | MsG0580028416.01.T01:intron | 55.0% |
| AGCAGCTGTCCCTGGAATGG+TGG | - | Chr5:80275938-80275957 | MsG0580028416.01.T01:intron | 60.0% | |
| AGCATCCCTCCCACCATTCC+AGG | + | Chr5:80275951-80275970 | MsG0580028417.01.T01:intron | 60.0% | |
| GCAGCTGTCCCTGGAATGGT+GGG | - | Chr5:80275939-80275958 | MsG0580028416.01.T01:intron | 60.0% | |
| GCATCCCTCCCACCATTCCA+GGG | + | Chr5:80275950-80275969 | MsG0580028417.01.T01:intron | 60.0% | |
| GGTGGTAGTTCCCACCACTG+CGG | + | Chr5:80274600-80274619 | MsG0580028417.01.T01:intron | 60.0% | |
| ! | CTGTCCCTGGAATGGTGGGA+GGG | - | Chr5:80275943-80275962 | MsG0580028416.01.T01:intron | 60.0% |
| !! | CGAGCTTTGTTCCGCAGTGG+TGG | - | Chr5:80274586-80274605 | MsG0580028416.01.T01:intron | 60.0% |
| !! | GCACGAGCTTTGTTCCGCAG+TGG | - | Chr5:80274583-80274602 | MsG0580028416.01.T01:intron | 60.0% |
| CAGCATGGCGGTGGTGCTTG+TGG | - | Chr5:80274661-80274680 | MsG0580028416.01.T01:intron | 65.0% | |
| ! | GCTGTCCCTGGAATGGTGGG+AGG | - | Chr5:80275942-80275961 | MsG0580028416.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 80274336 | 80277061 | 80274336 | ID=MsG0580028416.01;Name=MsG0580028416.01 |
| Chr5 | mRNA | 80274336 | 80277061 | 80274336 | ID=MsG0580028416.01.T01;Parent=MsG0580028416.01;Name=MsG0580028416.01.T01;_AED=0.49;_eAED=0.49;_QI=220|1|1|1|1|1|4|129|329 |
| Chr5 | exon | 80274336 | 80274524 | 80274336 | ID=MsG0580028416.01.T01:exon:32891;Parent=MsG0580028416.01.T01 |
| Chr5 | exon | 80275009 | 80275497 | 80275009 | ID=MsG0580028416.01.T01:exon:32890;Parent=MsG0580028416.01.T01 |
| Chr5 | exon | 80275794 | 80275922 | 80275794 | ID=MsG0580028416.01.T01:exon:32889;Parent=MsG0580028416.01.T01 |
| Chr5 | exon | 80276530 | 80277061 | 80276530 | ID=MsG0580028416.01.T01:exon:32888;Parent=MsG0580028416.01.T01 |
| Chr5 | five_prime_UTR | 80276842 | 80277061 | 80276842 | ID=MsG0580028416.01.T01:five_prime_utr;Parent=MsG0580028416.01.T01 |
| Chr5 | CDS | 80276530 | 80276841 | 80276530 | ID=MsG0580028416.01.T01:cds;Parent=MsG0580028416.01.T01 |
| Chr5 | CDS | 80275794 | 80275922 | 80275794 | ID=MsG0580028416.01.T01:cds;Parent=MsG0580028416.01.T01 |
| Chr5 | CDS | 80275009 | 80275497 | 80275009 | ID=MsG0580028416.01.T01:cds;Parent=MsG0580028416.01.T01 |
| Chr5 | CDS | 80274465 | 80274524 | 80274465 | ID=MsG0580028416.01.T01:cds;Parent=MsG0580028416.01.T01 |
| Chr5 | three_prime_UTR | 80274336 | 80274464 | 80274336 | ID=MsG0580028416.01.T01:three_prime_utr;Parent=MsG0580028416.01.T01 |
| Gene Sequence |
| Protein sequence |
