Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030839.01.T01 | XP_003618543.1 | 94.538 | 238 | 12 | 1 | 1 | 238 | 1 | 237 | 6.77E-167 | 470 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030839.01.T01 | G7KKZ0 | 94.538 | 238 | 12 | 1 | 1 | 238 | 1 | 237 | 3.23e-167 | 470 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047959.01 | MsG0680030839.01 | 0.808090 | 3.673526e-50 | 2.081308e-47 |
| MsG0080048461.01 | MsG0680030839.01 | 0.803687 | 3.095113e-49 | 1.565340e-46 |
| MsG0080048982.01 | MsG0680030839.01 | 0.804105 | 2.534665e-49 | 1.295742e-46 |
| MsG0180000220.01 | MsG0680030839.01 | 0.808225 | 3.438092e-50 | 1.954932e-47 |
| MsG0180000235.01 | MsG0680030839.01 | 0.835094 | 2.049439e-56 | 2.480161e-53 |
| MsG0180000271.01 | MsG0680030839.01 | 0.810966 | 8.860956e-51 | 5.417610e-48 |
| MsG0180000284.01 | MsG0680030839.01 | 0.808401 | 3.153550e-50 | 1.801438e-47 |
| MsG0180000503.01 | MsG0680030839.01 | 0.838229 | 3.256162e-57 | 4.333056e-54 |
| MsG0180000777.01 | MsG0680030839.01 | 0.815658 | 8.257522e-52 | 5.727823e-49 |
| MsG0180000982.01 | MsG0680030839.01 | 0.814743 | 1.318886e-51 | 8.922561e-49 |
| MsG0180001141.01 | MsG0680030839.01 | 0.800355 | 1.498476e-48 | 6.962794e-46 |
| MsG0180001312.01 | MsG0680030839.01 | 0.841428 | 4.779924e-58 | 7.021822e-55 |
| MsG0180001381.01 | MsG0680030839.01 | 0.820893 | 5.391515e-53 | 4.320500e-50 |
| MsG0180001391.01 | MsG0680030839.01 | 0.825179 | 5.398570e-54 | 4.884903e-51 |
| MsG0180001453.01 | MsG0680030839.01 | 0.821175 | 4.641946e-53 | 3.749095e-50 |
| MsG0180001570.01 | MsG0680030839.01 | 0.801858 | 7.384156e-49 | 3.564198e-46 |
| MsG0180001663.01 | MsG0680030839.01 | 0.836337 | 9.926172e-57 | 1.247255e-53 |
| MsG0180001886.01 | MsG0680030839.01 | 0.811456 | 6.937627e-51 | 4.296623e-48 |
| MsG0180001904.01 | MsG0680030839.01 | 0.825677 | 4.113428e-54 | 3.774999e-51 |
| MsG0180001922.01 | MsG0680030839.01 | 0.814158 | 1.776352e-51 | 1.182881e-48 |
| MsG0180002071.01 | MsG0680030839.01 | 0.800083 | 1.701840e-48 | 7.853279e-46 |
| MsG0180002489.01 | MsG0680030839.01 | 0.818233 | 2.181323e-52 | 1.623487e-49 |
| MsG0180002952.01 | MsG0680030839.01 | 0.808014 | 3.812582e-50 | 2.155726e-47 |
| MsG0180003671.01 | MsG0680030839.01 | 0.843362 | 1.468648e-58 | 2.292453e-55 |
| MsG0180003673.01 | MsG0680030839.01 | 0.811416 | 7.078666e-51 | 4.379244e-48 |
| MsG0180003686.01 | MsG0680030839.01 | 0.804624 | 1.975861e-49 | 1.023614e-46 |
| MsG0180003744.01 | MsG0680030839.01 | 0.802127 | 6.502097e-49 | 3.159812e-46 |
| MsG0180003810.01 | MsG0680030839.01 | 0.803919 | 2.770735e-49 | 1.409752e-46 |
| MsG0180003864.01 | MsG0680030839.01 | 0.814213 | 1.727560e-51 | 1.152083e-48 |
| MsG0180004157.01 | MsG0680030839.01 | 0.832439 | 9.447121e-56 | 1.055965e-52 |
| MsG0180004403.01 | MsG0680030839.01 | 0.807335 | 5.316000e-50 | 2.953045e-47 |
| MsG0180004599.01 | MsG0680030839.01 | 0.813261 | 2.799535e-51 | 1.819326e-48 |
| MsG0180004600.01 | MsG0680030839.01 | 0.815056 | 1.124037e-51 | 7.668793e-49 |
| MsG0180004667.01 | MsG0680030839.01 | -0.806141 | 9.502639e-50 | 5.118861e-47 |
| MsG0180004730.01 | MsG0680030839.01 | 0.811880 | 5.610093e-51 | 3.513466e-48 |
| MsG0180004779.01 | MsG0680030839.01 | 0.804149 | 2.481550e-49 | 1.270037e-46 |
| MsG0180004984.01 | MsG0680030839.01 | 0.822719 | 2.038238e-53 | 1.719738e-50 |
| MsG0180004996.01 | MsG0680030839.01 | 0.835567 | 1.556281e-56 | 1.910411e-53 |
| MsG0180005050.01 | MsG0680030839.01 | 0.803785 | 2.953814e-49 | 1.497675e-46 |
| MsG0180005398.01 | MsG0680030839.01 | 0.830640 | 2.620830e-55 | 2.777671e-52 |
| MsG0180005813.01 | MsG0680030839.01 | 0.821714 | 3.485942e-53 | 2.858162e-50 |
| MsG0180005842.01 | MsG0680030839.01 | 0.801460 | 8.909190e-49 | 4.257088e-46 |
| MsG0180006016.01 | MsG0680030839.01 | 0.832717 | 8.061626e-56 | 9.086291e-53 |
| MsG0180006050.01 | MsG0680030839.01 | 0.814979 | 1.169377e-51 | 7.961600e-49 |
| MsG0180006138.01 | MsG0680030839.01 | 0.818416 | 1.983224e-52 | 1.483746e-49 |
| MsG0180006207.01 | MsG0680030839.01 | 0.803235 | 3.840206e-49 | 1.919722e-46 |
| MsG0280006356.01 | MsG0680030839.01 | 0.815814 | 7.624433e-52 | 5.311079e-49 |
| MsG0280006411.01 | MsG0680030839.01 | 0.801565 | 8.480598e-49 | 4.062954e-46 |
| MsG0280010614.01 | MsG0680030839.01 | 0.800965 | 1.125226e-48 | 5.310134e-46 |
| MsG0280010702.01 | MsG0680030839.01 | 0.859117 | 5.161454e-63 | 1.347943e-59 |
| MsG0280010784.01 | MsG0680030839.01 | 0.833474 | 5.225223e-56 | 6.023693e-53 |
| MsG0280010901.01 | MsG0680030839.01 | 0.835331 | 1.785782e-56 | 2.177001e-53 |
| MsG0280011032.01 | MsG0680030839.01 | 0.810642 | 1.041471e-50 | 6.312133e-48 |
| MsG0280011131.01 | MsG0680030839.01 | 0.808723 | 2.691621e-50 | 1.550425e-47 |
| MsG0280011141.01 | MsG0680030839.01 | 0.809286 | 2.039881e-50 | 1.192850e-47 |
| MsG0280011182.01 | MsG0680030839.01 | 0.800009 | 1.762248e-48 | 8.116496e-46 |
| MsG0280011235.01 | MsG0680030839.01 | 0.811118 | 8.212845e-51 | 5.041102e-48 |
| MsG0280011410.01 | MsG0680030839.01 | 0.838014 | 3.697950e-57 | 4.889970e-54 |
| MsG0380014138.01 | MsG0680030839.01 | 0.800450 | 1.433436e-48 | 6.676384e-46 |
| MsG0380014248.01 | MsG0680030839.01 | 0.813262 | 2.798038e-51 | 1.818411e-48 |
| MsG0380014561.01 | MsG0680030839.01 | 0.802250 | 6.132348e-49 | 2.989653e-46 |
| MsG0380014573.01 | MsG0680030839.01 | 0.817024 | 4.086268e-52 | 2.942387e-49 |
| MsG0380014770.01 | MsG0680030839.01 | 0.800558 | 1.362418e-48 | 6.363106e-46 |
| MsG0680030839.01 | MsG0680031468.01 | 0.803475 | 3.425256e-49 | 1.722896e-46 |
| MsG0680030839.01 | MsG0680033391.01 | 0.816890 | 4.378680e-52 | 3.141278e-49 |
| MsG0680030839.01 | MsG0680034037.01 | 0.811926 | 5.484263e-51 | 3.438742e-48 |
| MsG0680030839.01 | MsG0680034219.01 | 0.816962 | 4.220342e-52 | 3.033932e-49 |
| MsG0680030839.01 | MsG0680035346.01 | 0.845063 | 5.130980e-59 | 8.448681e-56 |
| MsG0680030839.01 | MsG0780035958.01 | 0.835740 | 1.407646e-56 | 1.737018e-53 |
| MsG0680030839.01 | MsG0780038231.01 | 0.811897 | 5.561918e-51 | 3.484852e-48 |
| MsG0680030839.01 | MsG0780038401.01 | 0.802712 | 4.925439e-49 | 2.429672e-46 |
| MsG0680030839.01 | MsG0780038827.01 | 0.823438 | 1.384799e-53 | 1.192323e-50 |
| MsG0680030839.01 | MsG0780038911.01 | 0.831660 | 1.471735e-55 | 1.607705e-52 |
| MsG0680030839.01 | MsG0780039143.01 | 0.829471 | 5.053878e-55 | 5.177340e-52 |
| MsG0680030839.01 | MsG0780039144.01 | 0.820613 | 6.251755e-53 | 4.970447e-50 |
| MsG0680030839.01 | MsG0780039222.01 | -0.809665 | 1.691384e-50 | 9.991140e-48 |
| MsG0680030839.01 | MsG0780039252.01 | 0.810020 | 1.418318e-50 | 8.456826e-48 |
| MsG0680030839.01 | MsG0780039587.01 | 0.802494 | 5.463957e-49 | 2.680235e-46 |
| MsG0680030839.01 | MsG0780040442.01 | 0.803033 | 4.229217e-49 | 2.103241e-46 |
| MsG0680030839.01 | MsG0780040445.01 | 0.817874 | 2.628947e-52 | 1.937589e-49 |
| MsG0680030839.01 | MsG0780041065.01 | 0.824410 | 8.193995e-54 | 7.251475e-51 |
| MsG0680030839.01 | MsG0780041134.01 | 0.800990 | 1.112150e-48 | 5.251920e-46 |
| MsG0680030839.01 | MsG0780041255.01 | 0.838137 | 3.438079e-57 | 4.562518e-54 |
| MsG0680030839.01 | MsG0880042055.01 | 0.812015 | 5.242736e-51 | 3.295464e-48 |
| MsG0680030839.01 | MsG0880042065.01 | 0.826218 | 3.061207e-54 | 2.852907e-51 |
| MsG0680030839.01 | MsG0880042518.01 | 0.807603 | 4.663287e-50 | 2.608417e-47 |
| MsG0680030839.01 | MsG0880043082.01 | 0.803173 | 3.954961e-49 | 1.974013e-46 |
| MsG0680030839.01 | MsG0880043292.01 | 0.802927 | 4.446290e-49 | 2.205315e-46 |
| MsG0680030839.01 | MsG0880043341.01 | 0.814614 | 1.408420e-51 | 9.495466e-49 |
| MsG0680030839.01 | MsG0880043591.01 | 0.821543 | 3.817497e-53 | 3.114946e-50 |
| MsG0680030839.01 | MsG0880044415.01 | 0.806668 | 7.354492e-50 | 4.015173e-47 |
| MsG0680030839.01 | MsG0880044416.01 | 0.826330 | 2.878179e-54 | 2.690884e-51 |
| MsG0680030839.01 | MsG0880045106.01 | 0.808659 | 2.778534e-50 | 1.597805e-47 |
| MsG0680030839.01 | MsG0880045145.01 | 0.807765 | 4.307394e-50 | 2.419626e-47 |
| MsG0680030839.01 | MsG0880045290.01 | 0.805512 | 1.288231e-49 | 6.828076e-47 |
| MsG0680030839.01 | MsG0880045450.01 | 0.813508 | 2.470322e-51 | 1.616336e-48 |
| MsG0680030839.01 | MsG0880045535.01 | 0.811907 | 5.535331e-51 | 3.469093e-48 |
| MsG0680030839.01 | MsG0880045613.01 | 0.816077 | 6.659006e-52 | 4.672298e-49 |
| MsG0680030839.01 | MsG0880045736.01 | 0.809009 | 2.337957e-50 | 1.357016e-47 |
| MsG0680030839.01 | MsG0880046047.01 | 0.824726 | 6.905398e-54 | 6.168197e-51 |
| MsG0680030839.01 | MsG0880046113.01 | 0.809223 | 2.104383e-50 | 1.228510e-47 |
| MsG0680030839.01 | MsG0880046244.01 | 0.804866 | 1.758785e-49 | 9.169753e-47 |
| MsG0680030839.01 | MsG0880046531.01 | 0.822203 | 2.686326e-53 | 2.233398e-50 |
| MsG0680030839.01 | MsG0880046995.01 | 0.815661 | 8.246737e-52 | 5.720675e-49 |
| MsG0680030839.01 | MsG0880047019.01 | 0.825146 | 5.494977e-54 | 4.967582e-51 |
| MsG0680030839.01 | MsG0880047590.01 | 0.810008 | 1.426856e-50 | 8.504987e-48 |
| MsG0680030839.01 | MsG0880047745.01 | 0.827151 | 1.832408e-54 | 1.754245e-51 |
| MsG0480018460.01 | MsG0680030839.01 | 0.822921 | 1.829164e-53 | 1.552183e-50 |
| MsG0480018473.01 | MsG0680030839.01 | 0.821614 | 3.676286e-53 | 3.005535e-50 |
| MsG0480019434.01 | MsG0680030839.01 | 0.821947 | 3.079726e-53 | 2.541765e-50 |
| MsG0480020085.01 | MsG0680030839.01 | 0.801991 | 6.933185e-49 | 3.357675e-46 |
| MsG0480020090.01 | MsG0680030839.01 | 0.822411 | 2.403302e-53 | 2.010131e-50 |
| MsG0480020416.01 | MsG0680030839.01 | 0.815902 | 7.287866e-52 | 5.088607e-49 |
| MsG0480020445.01 | MsG0680030839.01 | 0.809230 | 2.097061e-50 | 1.224479e-47 |
| MsG0480020447.01 | MsG0680030839.01 | 0.801044 | 1.084305e-48 | 5.127300e-46 |
| MsG0480020839.01 | MsG0680030839.01 | 0.801244 | 9.867367e-49 | 4.689410e-46 |
| MsG0480021034.01 | MsG0680030839.01 | 0.809026 | 2.318947e-50 | 1.346581e-47 |
| MsG0480021240.01 | MsG0680030839.01 | 0.827461 | 1.544691e-54 | 1.492335e-51 |
| MsG0480021426.01 | MsG0680030839.01 | 0.804987 | 1.658789e-49 | 8.674906e-47 |
| MsG0480021464.01 | MsG0680030839.01 | 0.830994 | 2.145646e-55 | 2.297981e-52 |
| MsG0480021465.01 | MsG0680030839.01 | 0.817251 | 3.632501e-52 | 2.631818e-49 |
| MsG0480021695.01 | MsG0680030839.01 | 0.816356 | 5.767417e-52 | 4.077723e-49 |
| MsG0480022164.01 | MsG0680030839.01 | 0.813010 | 3.178329e-51 | 2.051559e-48 |
| MsG0480022198.01 | MsG0680030839.01 | 0.800509 | 1.393892e-48 | 6.501999e-46 |
| MsG0480022678.01 | MsG0680030839.01 | 0.810783 | 9.706286e-51 | 5.905179e-48 |
| MsG0480022750.01 | MsG0680030839.01 | 0.834031 | 3.791371e-56 | 4.444656e-53 |
| MsG0480022752.01 | MsG0680030839.01 | 0.870699 | 1.198303e-66 | 4.705171e-63 |
| MsG0480023088.01 | MsG0680030839.01 | 0.849161 | 3.862880e-60 | 7.259130e-57 |
| MsG0480023174.01 | MsG0680030839.01 | 0.806554 | 7.775989e-50 | 4.233193e-47 |
| MsG0480023224.01 | MsG0680030839.01 | 0.814817 | 1.270086e-51 | 8.609593e-49 |
| MsG0480023248.01 | MsG0680030839.01 | 0.816814 | 4.553816e-52 | 3.260129e-49 |
| MsG0480023270.01 | MsG0680030839.01 | 0.822719 | 2.038474e-53 | 1.719923e-50 |
| MsG0480023412.01 | MsG0680030839.01 | 0.810488 | 1.124093e-50 | 6.784944e-48 |
| MsG0480023468.01 | MsG0680030839.01 | 0.806402 | 8.369919e-50 | 4.538719e-47 |
| MsG0480023654.01 | MsG0680030839.01 | 0.801875 | 7.324109e-49 | 3.536837e-46 |
| MsG0480023835.01 | MsG0680030839.01 | 0.809156 | 2.174996e-50 | 1.267462e-47 |
| MsG0480023994.01 | MsG0680030839.01 | 0.820350 | 7.186573e-53 | 5.672555e-50 |
| MsG0480024014.01 | MsG0680030839.01 | 0.822209 | 2.677201e-53 | 2.226228e-50 |
| MsG0580024114.01 | MsG0680030839.01 | 0.811561 | 6.582621e-51 | 4.087951e-48 |
| MsG0580024274.01 | MsG0680030839.01 | 0.812901 | 3.357500e-51 | 2.160958e-48 |
| MsG0580025009.01 | MsG0680030839.01 | 0.829717 | 4.401999e-55 | 4.542633e-52 |
| MsG0580025026.01 | MsG0680030839.01 | 0.839557 | 1.475842e-57 | 2.045354e-54 |
| MsG0580025448.01 | MsG0680030839.01 | 0.803245 | 3.821309e-49 | 1.910802e-46 |
| MsG0580025749.01 | MsG0680030839.01 | 0.821175 | 4.643904e-53 | 3.750592e-50 |
| MsG0580025758.01 | MsG0680030839.01 | 0.831320 | 1.784782e-55 | 1.929998e-52 |
| MsG0580025907.01 | MsG0680030839.01 | 0.805663 | 1.197611e-49 | 6.372740e-47 |
| MsG0580026047.01 | MsG0680030839.01 | 0.844211 | 8.698613e-59 | 1.394430e-55 |
| MsG0380015436.01 | MsG0680030839.01 | 0.804382 | 2.218775e-49 | 1.142375e-46 |
| MsG0380015564.01 | MsG0680030839.01 | 0.802538 | 5.349528e-49 | 2.627152e-46 |
| MsG0380015771.01 | MsG0680030839.01 | 0.820262 | 7.525218e-53 | 5.925423e-50 |
| MsG0380016133.01 | MsG0680030839.01 | 0.800073 | 1.709979e-48 | 7.888715e-46 |
| MsG0380016209.01 | MsG0680030839.01 | 0.800093 | 1.693740e-48 | 7.817772e-46 |
| MsG0380016581.01 | MsG0680030839.01 | 0.879852 | 8.882431e-70 | 4.892700e-66 |
| MsG0380016624.01 | MsG0680030839.01 | 0.878030 | 3.903234e-69 | 2.006416e-65 |
| MsG0380016923.01 | MsG0680030839.01 | 0.814025 | 1.901148e-51 | 1.261423e-48 |
| MsG0380017039.01 | MsG0680030839.01 | 0.802073 | 6.670960e-49 | 3.237491e-46 |
| MsG0380017146.01 | MsG0680030839.01 | 0.803329 | 3.671425e-49 | 1.839769e-46 |
| MsG0380017285.01 | MsG0680030839.01 | 0.844938 | 5.543812e-59 | 9.092422e-56 |
| MsG0380017326.01 | MsG0680030839.01 | 0.827864 | 1.236362e-54 | 1.208526e-51 |
| MsG0380017351.01 | MsG0680030839.01 | 0.802263 | 6.095139e-49 | 2.972448e-46 |
| MsG0380017403.01 | MsG0680030839.01 | 0.817075 | 3.979947e-52 | 2.869719e-49 |
| MsG0380017543.01 | MsG0680030839.01 | 0.822687 | 2.072712e-53 | 1.747258e-50 |
| MsG0380017551.01 | MsG0680030839.01 | -0.825311 | 5.024659e-54 | 4.563345e-51 |
| MsG0480018163.01 | MsG0680030839.01 | 0.816443 | 5.515684e-52 | 3.908619e-49 |
| MsG0580026086.01 | MsG0680030839.01 | 0.801629 | 8.228216e-49 | 3.948349e-46 |
| MsG0580026340.01 | MsG0680030839.01 | 0.827283 | 1.704149e-54 | 1.637848e-51 |
| MsG0580026718.01 | MsG0680030839.01 | 0.800546 | 1.369691e-48 | 6.395138e-46 |
| MsG0580026777.01 | MsG0680030839.01 | 0.804044 | 2.609120e-49 | 1.331750e-46 |
| MsG0580027074.01 | MsG0680030839.01 | 0.839389 | 1.631220e-57 | 2.249479e-54 |
| MsG0580027152.01 | MsG0680030839.01 | 0.832181 | 1.094422e-55 | 1.213934e-52 |
| MsG0580027228.01 | MsG0680030839.01 | 0.871602 | 6.031073e-67 | 2.447552e-63 |
| MsG0580027344.01 | MsG0680030839.01 | 0.837817 | 4.154446e-57 | 5.460309e-54 |
| MsG0580027605.01 | MsG0680030839.01 | 0.856976 | 2.235288e-62 | 5.431428e-59 |
| MsG0580027615.01 | MsG0680030839.01 | 0.835812 | 1.349442e-56 | 1.668673e-53 |
| MsG0580028284.01 | MsG0680030839.01 | 0.844216 | 8.673527e-59 | 1.390602e-55 |
| MsG0580028289.01 | MsG0680030839.01 | 0.822608 | 2.162956e-53 | 1.819409e-50 |
| MsG0680030351.01 | MsG0680030839.01 | 0.809938 | 1.477292e-50 | 8.789226e-48 |
| MsG0680030415.01 | MsG0680030839.01 | 0.805791 | 1.125714e-49 | 6.010069e-47 |
| MsG0680030463.01 | MsG0680030839.01 | 0.824846 | 6.468476e-54 | 5.797581e-51 |
| MsG0280006595.01 | MsG0680030839.01 | 0.840603 | 7.870690e-58 | 1.126836e-54 |
| MsG0280007117.01 | MsG0680030839.01 | 0.820943 | 5.251527e-53 | 4.214196e-50 |
| MsG0280007311.01 | MsG0680030839.01 | 0.813747 | 2.188839e-51 | 1.441381e-48 |
| MsG0280007549.01 | MsG0680030839.01 | 0.805286 | 1.436784e-49 | 7.571528e-47 |
| MsG0280007564.01 | MsG0680030839.01 | 0.812745 | 3.631698e-51 | 2.327888e-48 |
| MsG0280007636.01 | MsG0680030839.01 | 0.829362 | 5.369828e-55 | 5.484281e-52 |
| MsG0280007815.01 | MsG0680030839.01 | 0.837472 | 5.094875e-57 | 6.625317e-54 |
| MsG0280008286.01 | MsG0680030839.01 | 0.802717 | 4.915014e-49 | 2.424843e-46 |
| MsG0280008363.01 | MsG0680030839.01 | 0.822649 | 2.115587e-53 | 1.781505e-50 |
| MsG0280008414.01 | MsG0680030839.01 | 0.804147 | 2.483369e-49 | 1.270917e-46 |
| MsG0280008417.01 | MsG0680030839.01 | 0.863725 | 2.027294e-64 | 6.209160e-61 |
| MsG0280008615.01 | MsG0680030839.01 | 0.824874 | 6.369976e-54 | 5.714028e-51 |
| MsG0280008907.01 | MsG0680030839.01 | 0.825184 | 5.383727e-54 | 4.872212e-51 |
| MsG0280008936.01 | MsG0680030839.01 | 0.814646 | 1.385869e-51 | 9.351530e-49 |
| MsG0280008970.01 | MsG0680030839.01 | 0.827274 | 1.712306e-54 | 1.645274e-51 |
| MsG0280009024.01 | MsG0680030839.01 | 0.863622 | 2.183525e-64 | 6.662122e-61 |
| MsG0280009637.01 | MsG0680030839.01 | -0.804525 | 2.071973e-49 | 1.070659e-46 |
| MsG0280009739.01 | MsG0680030839.01 | 0.851954 | 6.335964e-61 | 1.303496e-57 |
| MsG0280010287.01 | MsG0680030839.01 | 0.800239 | 1.581892e-48 | 7.328594e-46 |
| MsG0280010416.01 | MsG0680030839.01 | 0.827584 | 1.443252e-54 | 1.399092e-51 |
| MsG0280010531.01 | MsG0680030839.01 | 0.807933 | 3.967967e-50 | 2.238730e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030839.01.T01 | MTR_6g012830 | 94.538 | 238 | 12 | 1 | 1 | 238 | 1 | 237 | 8.20e-171 | 470 |
| MsG0680030839.01.T01 | MTR_6g012830 | 94.146 | 205 | 11 | 1 | 1 | 205 | 1 | 204 | 7.39e-145 | 403 |
| MsG0680030839.01.T01 | MTR_6g012830 | 83.613 | 238 | 10 | 2 | 1 | 238 | 1 | 209 | 1.36e-143 | 400 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030839.01.T01 | AT5G39530 | 45.550 | 191 | 103 | 1 | 39 | 229 | 43 | 232 | 3.02e-60 | 190 |
| MsG0680030839.01.T01 | AT5G39520 | 41.624 | 197 | 113 | 2 | 39 | 235 | 35 | 229 | 1.83e-54 | 175 |
| MsG0680030839.01.T01 | AT5G39530 | 43.784 | 185 | 95 | 2 | 39 | 223 | 43 | 218 | 2.22e-53 | 172 |
Find 53 sgRNAs with CRISPR-Local
Find 114 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTACTCTTTCCCTTCCTTTC+TGG | 0.048858 | 6:-10272379 | None:intergenic |
| CTTAACCTTACATCTGCTTT+TGG | 0.219654 | 6:-10271996 | None:intergenic |
| ATGATTCCAAAAGGACATTA+TGG | 0.257673 | 6:+10273242 | MsG0680030839.01.T01:three_prime_UTR |
| ACCCCTGGTAACTCATAAAA+AGG | 0.262948 | 6:-10271260 | None:intergenic |
| TAGAATCCATAATGTCCTTT+TGG | 0.266170 | 6:-10273248 | None:intergenic |
| GGCTTCCTTTGATCAATATA+TGG | 0.278362 | 6:+10271373 | MsG0680030839.01.T01:intron |
| TTTGGCTTGCACAATGTTCT+TGG | 0.289668 | 6:+10273181 | MsG0680030839.01.T01:three_prime_UTR |
| AAAGCAGTGTTTCCTGAAAA+AGG | 0.293804 | 6:+10271416 | MsG0680030839.01.T01:CDS |
| AGAATTCATTGCAGTTAATC+AGG | 0.305063 | 6:-10273056 | None:intergenic |
| TGATCCATCATTGATTCAAT+TGG | 0.342949 | 6:-10272998 | None:intergenic |
| CATCATGTTCATCAGTGATT+AGG | 0.371639 | 6:+10271192 | MsG0680030839.01.T01:CDS |
| TATACAATGCTTCATCTTGA+AGG | 0.378322 | 6:+10271968 | MsG0680030839.01.T01:CDS |
| GCATCTCGCAAGACATGTTC+AGG | 0.391227 | 6:-10272466 | None:intergenic |
| CTGTCAAAGTTGTAAACAAA+TGG | 0.407838 | 6:-10272951 | None:intergenic |
| TGTATAAGGTATTGAGTCCT+TGG | 0.417418 | 6:-10272312 | None:intergenic |
| GACTTCAACTTAGATGTAAG+AGG | 0.434676 | 6:+10272346 | MsG0680030839.01.T01:CDS |
| AACACTGCTTTGACTACTCT+TGG | 0.446906 | 6:-10271404 | None:intergenic |
| TCAGCCAATTGAATCAATGA+TGG | 0.448266 | 6:+10272994 | MsG0680030839.01.T01:three_prime_UTR |
| CAAGTATTAGTGTGGTTCCT+TGG | 0.454957 | 6:+10271111 | MsG0680030839.01.T01:CDS |
| AGGTTAAGAATAAAGTCTAA+TGG | 0.464292 | 6:+10272011 | MsG0680030839.01.T01:CDS |
| GTCGTAAGGATCATTGTATA+AGG | 0.478912 | 6:-10272326 | None:intergenic |
| CAAATGAAGCAGGAATTTCA+TGG | 0.480806 | 6:+10272853 | MsG0680030839.01.T01:CDS |
| TTCAACCAAAAGCAGATGTA+AGG | 0.481494 | 6:+10271991 | MsG0680030839.01.T01:CDS |
| TCAGGAACAAAAGTCATTGT+TGG | 0.485860 | 6:-10272448 | None:intergenic |
| TTATATGTATACAGGAAGAA+TGG | 0.489509 | 6:+10271928 | MsG0680030839.01.T01:intron |
| AAAGGAAGGGAAAGAGTAGT+TGG | 0.497535 | 6:+10272383 | MsG0680030839.01.T01:CDS |
| TTCAAGATGAAGCATTGTAT+AGG | 0.516620 | 6:-10271966 | None:intergenic |
| TATTATATATCCAGAAAGGA+AGG | 0.525308 | 6:+10272369 | MsG0680030839.01.T01:CDS |
| TGTACTAATAATGGTTGCCA+AGG | 0.529607 | 6:-10271128 | None:intergenic |
| TTAAATCCTATCAGACGAAG+TGG | 0.531858 | 6:+10272284 | MsG0680030839.01.T01:intron |
| ACTTTAGAAATGATTCCAAA+AGG | 0.532077 | 6:+10273233 | MsG0680030839.01.T01:three_prime_UTR |
| GCTTGCACAATGTTCTTGGA+AGG | 0.535078 | 6:+10273185 | MsG0680030839.01.T01:three_prime_UTR |
| CTTGCGAGATGCATTAGAGT+TGG | 0.545831 | 6:+10272477 | MsG0680030839.01.T01:CDS |
| TATTAGTACAAAAGAAGCAT+AGG | 0.548171 | 6:+10271141 | MsG0680030839.01.T01:CDS |
| AAAGTTGTAAACAAATGGAA+TGG | 0.548320 | 6:-10272946 | None:intergenic |
| ACATCTAAGTTGAAGTCGTA+AGG | 0.548661 | 6:-10272340 | None:intergenic |
| AATACTTCTATAGCTGAATG+AGG | 0.548861 | 6:-10271228 | None:intergenic |
| GATGTGGAATCAAATGAAGC+AGG | 0.560904 | 6:+10272843 | MsG0680030839.01.T01:CDS |
| AATGGACCACATGTTTAGAC+TGG | 0.571782 | 6:-10272928 | None:intergenic |
| AAGATGAAGCATTGTATAGG+AGG | 0.579892 | 6:-10271963 | None:intergenic |
| TAGTTGGCTCAAGAATCAAA+TGG | 0.580045 | 6:+10272399 | MsG0680030839.01.T01:CDS |
| ATCATCCATATATTGATCAA+AGG | 0.580382 | 6:-10271378 | None:intergenic |
| GAGGTATTATATATCCAGAA+AGG | 0.582099 | 6:+10272365 | MsG0680030839.01.T01:CDS |
| ATGTGATGAGGAATGTGAGG+TGG | 0.585549 | 6:-10272044 | None:intergenic |
| AACTTTGACAGCAATTGCTG+AGG | 0.594475 | 6:+10272963 | MsG0680030839.01.T01:three_prime_UTR |
| CAGACGAAGTGGGAGCTCCA+AGG | 0.602105 | 6:+10272295 | MsG0680030839.01.T01:intron |
| ATTATATATCCAGAAAGGAA+GGG | 0.617916 | 6:+10272370 | MsG0680030839.01.T01:CDS |
| TATTATGGCAAGTATTAGTG+TGG | 0.633104 | 6:+10271103 | None:intergenic |
| AAAAGTCCAGTCTAAACATG+TGG | 0.642223 | 6:+10272922 | MsG0680030839.01.T01:exon |
| AACAGGTATTCAAAACGATG+TGG | 0.655966 | 6:+10272827 | MsG0680030839.01.T01:intron |
| AAACTCTAAACAGCTCAATG+AGG | 0.660173 | 6:+10271439 | MsG0680030839.01.T01:CDS |
| TAAATCCTATCAGACGAAGT+GGG | 0.661835 | 6:+10272285 | MsG0680030839.01.T01:intron |
| CTAATGTGATGAGGAATGTG+AGG | 0.705321 | 6:-10272047 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTTATGTTAGAATCAT+TGG | - | Chr6:10271337-10271356 | None:intergenic | 15.0% |
| !! | ATATACAAATATAAGCTATT+TGG | - | Chr6:10272755-10272774 | None:intergenic | 15.0% |
| !! | CATATAACTTTAACAAATTA+TGG | - | Chr6:10271703-10271722 | None:intergenic | 15.0% |
| !! | TATATTTGTATATCAAATAG+TGG | + | Chr6:10272785-10272804 | MsG0680030839.01.T01:intron | 15.0% |
| !!! | AGTTATATGGTTTTAAATTA+TGG | + | Chr6:10271714-10271733 | MsG0680030839.01.T01:intron | 15.0% |
| !!! | CATAATTTGTTAAAGTTATA+TGG | + | Chr6:10271701-10271720 | MsG0680030839.01.T01:intron | 15.0% |
| !!! | TAAATTAGTTTAAGCAAATT+TGG | - | Chr6:10272575-10272594 | None:intergenic | 15.0% |
| !!! | TATATGTTGATAAAATTAAC+AGG | + | Chr6:10272810-10272829 | MsG0680030839.01.T01:intron | 15.0% |
| !! | AACTTATCTAATTTGAACTA+AGG | + | Chr6:10272625-10272644 | MsG0680030839.01.T01:intron | 20.0% |
| !! | ACTATTGTTTATATGTATAC+AGG | + | Chr6:10271920-10271939 | MsG0680030839.01.T01:intron | 20.0% |
| !! | ACTTATCTAATTTGAACTAA+GGG | + | Chr6:10272626-10272645 | MsG0680030839.01.T01:intron | 20.0% |
| !! | TAAATGCAAAAACAAAAATG+TGG | + | Chr6:10271764-10271783 | MsG0680030839.01.T01:intron | 20.0% |
| !! | TGCATTTAACTGTAATATAA+AGG | - | Chr6:10271752-10271771 | None:intergenic | 20.0% |
| !!! | ACTAGTGTAATTTTTTCTTT+TGG | + | Chr6:10273163-10273182 | MsG0680030839.01.T01:three_prime_UTR | 20.0% |
| !!! | GATCATTGTTATTTCATTTT+CGG | + | Chr6:10272155-10272174 | MsG0680030839.01.T01:intron | 20.0% |
| !!! | TAAACTAATTTAGACTTGTT+TGG | + | Chr6:10272583-10272602 | MsG0680030839.01.T01:intron | 20.0% |
| !!! | TACTCATTAGCTTTAATTAA+GGG | - | Chr6:10271891-10271910 | None:intergenic | 20.0% |
| !!! | TTTAGAACTATATATGTGTA+TGG | + | Chr6:10271673-10271692 | MsG0680030839.01.T01:intron | 20.0% |
| ! | AAAGTTGTAAACAAATGGAA+TGG | - | Chr6:10272949-10272968 | None:intergenic | 25.0% |
| ! | ACAATAGTTTAATTCTCATC+CGG | - | Chr6:10272680-10272699 | None:intergenic | 25.0% |
| ! | AGGTTAAGAATAAAGTCTAA+TGG | + | Chr6:10272011-10272030 | MsG0680030839.01.T01:CDS | 25.0% |
| ! | ATCATCCATATATTGATCAA+AGG | - | Chr6:10271381-10271400 | None:intergenic | 25.0% |
| ! | ATTATATATCCAGAAAGGAA+GGG | + | Chr6:10272370-10272389 | MsG0680030839.01.T01:CDS | 25.0% |
| ! | TATTATATATCCAGAAAGGA+AGG | + | Chr6:10272369-10272388 | MsG0680030839.01.T01:CDS | 25.0% |
| ! | TCACGAATATAATTGATTGA+CGG | + | Chr6:10272231-10272250 | MsG0680030839.01.T01:intron | 25.0% |
| ! | TTATATGTATACAGGAAGAA+TGG | + | Chr6:10271928-10271947 | MsG0680030839.01.T01:intron | 25.0% |
| ! | TTGTTGAACAAACTCTAATA+TGG | - | Chr6:10272525-10272544 | None:intergenic | 25.0% |
| ! | TTTAATTAAGGGACACAATA+TGG | - | Chr6:10271880-10271899 | None:intergenic | 25.0% |
| !! | AAAAGATGACATGTTTGTTA+CGG | - | Chr6:10272727-10272746 | None:intergenic | 25.0% |
| !! | ACATCTAAAACCTTATATTG+AGG | + | Chr6:10271615-10271634 | MsG0680030839.01.T01:intron | 25.0% |
| !! | ACTTTAGAAATGATTCCAAA+AGG | + | Chr6:10273233-10273252 | MsG0680030839.01.T01:three_prime_UTR | 25.0% |
| !! | ATTTTTGTGATTTTCTTTGC+AGG | + | Chr6:10271352-10271371 | MsG0680030839.01.T01:intron | 25.0% |
| !! | TATTAGTACAAAAGAAGCAT+AGG | + | Chr6:10271141-10271160 | MsG0680030839.01.T01:CDS | 25.0% |
| !! | TGCTTCTTTTGTACTAATAA+TGG | - | Chr6:10271140-10271159 | None:intergenic | 25.0% |
| !! | TTATGTTAGAATCATTGGTT+TGG | - | Chr6:10271332-10271351 | None:intergenic | 25.0% |
| !!! | CCTCTAAAATTGTTATATTG+CGG | + | Chr6:10271822-10271841 | MsG0680030839.01.T01:intron | 25.0% |
| !!! | GTACTCATTAGCTTTAATTA+AGG | - | Chr6:10271892-10271911 | None:intergenic | 25.0% |
| AATACTTCTATAGCTGAATG+AGG | - | Chr6:10271231-10271250 | None:intergenic | 30.0% | |
| AGAATTCATTGCAGTTAATC+AGG | - | Chr6:10273059-10273078 | None:intergenic | 30.0% | |
| ATGATTCCAAAAGGACATTA+TGG | + | Chr6:10273242-10273261 | MsG0680030839.01.T01:three_prime_UTR | 30.0% | |
| CAATAGTTTAATTCTCATCC+GGG | - | Chr6:10272679-10272698 | None:intergenic | 30.0% | |
| CTAATTTGAACTAAGGGATA+AGG | + | Chr6:10272632-10272651 | MsG0680030839.01.T01:intron | 30.0% | |
| CTGTCAAAGTTGTAAACAAA+TGG | - | Chr6:10272954-10272973 | None:intergenic | 30.0% | |
| GAAGATGAAGATGGTAATTA+AGG | - | Chr6:10271305-10271324 | None:intergenic | 30.0% | |
| TATACAATGCTTCATCTTGA+AGG | + | Chr6:10271968-10271987 | MsG0680030839.01.T01:CDS | 30.0% | |
| TGAGTCTAAATTGCGTAATT+CGG | - | Chr6:10271641-10271660 | None:intergenic | 30.0% | |
| TTACGTTGCAAACCTTTATA+TGG | + | Chr6:10271539-10271558 | MsG0680030839.01.T01:intron | 30.0% | |
| ! | AAACAAAAATGTGGTTGATG+TGG | + | Chr6:10271773-10271792 | MsG0680030839.01.T01:intron | 30.0% |
| ! | AAACTTTGATAATATACCCC+TGG | - | Chr6:10271278-10271297 | None:intergenic | 30.0% |
| ! | AGAATTTTGCTAATGTGATG+AGG | - | Chr6:10272059-10272078 | None:intergenic | 30.0% |
| ! | CATTTTGTAAGCACTTTCAT+TGG | + | Chr6:10272086-10272105 | MsG0680030839.01.T01:intron | 30.0% |
| ! | CCGCAATATAACAATTTTAG+AGG | - | Chr6:10271825-10271844 | None:intergenic | 30.0% |
| ! | GAGGTATTATATATCCAGAA+AGG | + | Chr6:10272365-10272384 | MsG0680030839.01.T01:CDS | 30.0% |
| ! | TTCCTTTTTATGAGTTACCA+GGG | + | Chr6:10271258-10271277 | MsG0680030839.01.T01:CDS | 30.0% |
| !! | TGATCCATCATTGATTCAAT+TGG | - | Chr6:10273001-10273020 | None:intergenic | 30.0% |
| !! | TGTTTAGAGTTTCCTTTTTC+AGG | - | Chr6:10271431-10271450 | None:intergenic | 30.0% |
| !! | TTAGAATCATTGGTTTGGAT+TGG | - | Chr6:10271327-10271346 | None:intergenic | 30.0% |
| !! | TTCAAGATGAAGCATTGTAT+AGG | - | Chr6:10271969-10271988 | None:intergenic | 30.0% |
| AAAAGTCCAGTCTAAACATG+TGG | + | Chr6:10272922-10272941 | MsG0680030839.01.T01:exon | 35.0% | |
| AAACTCTAAACAGCTCAATG+AGG | + | Chr6:10271439-10271458 | MsG0680030839.01.T01:CDS | 35.0% | |
| AAAGCAGTGTTTCCTGAAAA+AGG | + | Chr6:10271416-10271435 | MsG0680030839.01.T01:CDS | 35.0% | |
| AACAGGTATTCAAAACGATG+TGG | + | Chr6:10272827-10272846 | MsG0680030839.01.T01:intron | 35.0% | |
| CAAATGAAGCAGGAATTTCA+TGG | + | Chr6:10272853-10272872 | MsG0680030839.01.T01:CDS | 35.0% | |
| CATCATGTTCATCAGTGATT+AGG | + | Chr6:10271192-10271211 | MsG0680030839.01.T01:CDS | 35.0% | |
| GACTTCAACTTAGATGTAAG+AGG | + | Chr6:10272346-10272365 | MsG0680030839.01.T01:CDS | 35.0% | |
| GGCTTCCTTTGATCAATATA+TGG | + | Chr6:10271373-10271392 | MsG0680030839.01.T01:intron | 35.0% | |
| GTCGTAAGGATCATTGTATA+AGG | - | Chr6:10272329-10272348 | None:intergenic | 35.0% | |
| TAAATCCTATCAGACGAAGT+GGG | + | Chr6:10272285-10272304 | MsG0680030839.01.T01:intron | 35.0% | |
| TAGTAGTTTCCGTTATGATG+CGG | + | Chr6:10271796-10271815 | MsG0680030839.01.T01:intron | 35.0% | |
| TCAGCCAATTGAATCAATGA+TGG | + | Chr6:10272994-10273013 | MsG0680030839.01.T01:three_prime_UTR | 35.0% | |
| TCAGGAACAAAAGTCATTGT+TGG | - | Chr6:10272451-10272470 | None:intergenic | 35.0% | |
| TGTACTAATAATGGTTGCCA+AGG | - | Chr6:10271131-10271150 | None:intergenic | 35.0% | |
| TTAAATCCTATCAGACGAAG+TGG | + | Chr6:10272284-10272303 | MsG0680030839.01.T01:intron | 35.0% | |
| TTCAACCAAAAGCAGATGTA+AGG | + | Chr6:10271991-10272010 | MsG0680030839.01.T01:CDS | 35.0% | |
| TTTCGGATAATGCATCGTTA+GGG | + | Chr6:10272172-10272191 | MsG0680030839.01.T01:intron | 35.0% | |
| ! | ACATCTAAGTTGAAGTCGTA+AGG | - | Chr6:10272343-10272362 | None:intergenic | 35.0% |
| ! | CTTAACCTTACATCTGCTTT+TGG | - | Chr6:10271999-10272018 | None:intergenic | 35.0% |
| ! | GTTCCTTTTTATGAGTTACC+AGG | + | Chr6:10271257-10271276 | MsG0680030839.01.T01:CDS | 35.0% |
| ! | TAGTTGGCTCAAGAATCAAA+TGG | + | Chr6:10272399-10272418 | MsG0680030839.01.T01:CDS | 35.0% |
| ! | TCCTTTTTATGAGTTACCAG+GGG | + | Chr6:10271259-10271278 | MsG0680030839.01.T01:CDS | 35.0% |
| ! | TGCATTTTACGGCCATATAA+AGG | - | Chr6:10271554-10271573 | None:intergenic | 35.0% |
| ! | TGTTTAGACTGGACTTTTCT+TGG | - | Chr6:10272920-10272939 | None:intergenic | 35.0% |
| ! | TTTGGATTGGAAGATGAAGA+TGG | - | Chr6:10271314-10271333 | None:intergenic | 35.0% |
| ! | TTTTCGGATAATGCATCGTT+AGG | + | Chr6:10272171-10272190 | MsG0680030839.01.T01:intron | 35.0% |
| !! | AAGATGAAGCATTGTATAGG+AGG | - | Chr6:10271966-10271985 | None:intergenic | 35.0% |
| !! | TGTATAAGGTATTGAGTCCT+TGG | - | Chr6:10272315-10272334 | None:intergenic | 35.0% |
| AAAGGAAGGGAAAGAGTAGT+TGG | + | Chr6:10272383-10272402 | MsG0680030839.01.T01:CDS | 40.0% | |
| AACACTGCTTTGACTACTCT+TGG | - | Chr6:10271407-10271426 | None:intergenic | 40.0% | |
| AACTGCAATTGTGGACTCAT+CGG | - | Chr6:10271578-10271597 | None:intergenic | 40.0% | |
| AACTTTGACAGCAATTGCTG+AGG | + | Chr6:10272963-10272982 | MsG0680030839.01.T01:three_prime_UTR | 40.0% | |
| AATGGACCACATGTTTAGAC+TGG | - | Chr6:10272931-10272950 | None:intergenic | 40.0% | |
| ACCCCTGGTAACTCATAAAA+AGG | - | Chr6:10271263-10271282 | None:intergenic | 40.0% | |
| ACTAAGGGATAAGGAGTTTG+AGG | + | Chr6:10272641-10272660 | MsG0680030839.01.T01:intron | 40.0% | |
| CAAGTATTAGTGTGGTTCCT+TGG | + | Chr6:10271111-10271130 | MsG0680030839.01.T01:CDS | 40.0% | |
| CGTAATTCGGCCTCAATATA+AGG | - | Chr6:10271628-10271647 | None:intergenic | 40.0% | |
| CTAATGTGATGAGGAATGTG+AGG | - | Chr6:10272050-10272069 | None:intergenic | 40.0% | |
| GATGTGGAATCAAATGAAGC+AGG | + | Chr6:10272843-10272862 | MsG0680030839.01.T01:CDS | 40.0% | |
| TAGAGGTTTCCGCATCATAA+CGG | - | Chr6:10271808-10271827 | None:intergenic | 40.0% | |
| TTATATTGCGGCTGCAATTG+TGG | + | Chr6:10271834-10271853 | MsG0680030839.01.T01:intron | 40.0% | |
| !! | GACTCATCGGTTGCATTTTA+CGG | - | Chr6:10271565-10271584 | None:intergenic | 40.0% |
| !! | TTGCAGTTGTGATGTCGTTT+TGG | + | Chr6:10271590-10271609 | MsG0680030839.01.T01:intron | 40.0% |
| !! | TTTGGCTTGCACAATGTTCT+TGG | + | Chr6:10273181-10273200 | MsG0680030839.01.T01:three_prime_UTR | 40.0% |
| ATGTGATGAGGAATGTGAGG+TGG | - | Chr6:10272047-10272066 | None:intergenic | 45.0% | |
| CGACATCACAACTGCAATTG+TGG | - | Chr6:10271587-10271606 | None:intergenic | 45.0% | |
| CTACTCTTTCCCTTCCTTTC+TGG | - | Chr6:10272382-10272401 | None:intergenic | 45.0% | |
| CTTGCGAGATGCATTAGAGT+TGG | + | Chr6:10272477-10272496 | MsG0680030839.01.T01:CDS | 45.0% | |
| GCTTGCACAATGTTCTTGGA+AGG | + | Chr6:10273185-10273204 | MsG0680030839.01.T01:three_prime_UTR | 45.0% | |
| ! | TTGAGGTCTGGTTTCAAACC+CGG | + | Chr6:10272658-10272677 | MsG0680030839.01.T01:intron | 45.0% |
| GCATCTCGCAAGACATGTTC+AGG | - | Chr6:10272469-10272488 | None:intergenic | 50.0% | |
| ! | GGGATAAGGAGTTTGAGGTC+TGG | + | Chr6:10272646-10272665 | MsG0680030839.01.T01:intron | 50.0% |
| GAGCTCCCACTTCGTCTGAT+AGG | - | Chr6:10272293-10272312 | None:intergenic | 55.0% | |
| GCTGCAATTGTGGTTGCGGA+CGG | + | Chr6:10271844-10271863 | MsG0680030839.01.T01:intron | 55.0% | |
| TGCGGCTGCAATTGTGGTTG+CGG | + | Chr6:10271840-10271859 | MsG0680030839.01.T01:intron | 55.0% | |
| CAGACGAAGTGGGAGCTCCA+AGG | + | Chr6:10272295-10272314 | MsG0680030839.01.T01:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 10271107 | 10273267 | 10271107 | ID=MsG0680030839.01;Name=MsG0680030839.01 |
| Chr6 | mRNA | 10271107 | 10273267 | 10271107 | ID=MsG0680030839.01.T01;Parent=MsG0680030839.01;Name=MsG0680030839.01.T01;_AED=0.30;_eAED=0.30;_QI=0|1|1|1|1|1|5|331|238 |
| Chr6 | exon | 10271107 | 10271280 | 10271107 | ID=MsG0680030839.01.T01:exon:7915;Parent=MsG0680030839.01.T01 |
| Chr6 | exon | 10271374 | 10271460 | 10271374 | ID=MsG0680030839.01.T01:exon:7916;Parent=MsG0680030839.01.T01 |
| Chr6 | exon | 10271942 | 10272091 | 10271942 | ID=MsG0680030839.01.T01:exon:7917;Parent=MsG0680030839.01.T01 |
| Chr6 | exon | 10272298 | 10272498 | 10272298 | ID=MsG0680030839.01.T01:exon:7918;Parent=MsG0680030839.01.T01 |
| Chr6 | exon | 10272832 | 10273267 | 10272832 | ID=MsG0680030839.01.T01:exon:7919;Parent=MsG0680030839.01.T01 |
| Chr6 | CDS | 10271107 | 10271280 | 10271107 | ID=MsG0680030839.01.T01:cds;Parent=MsG0680030839.01.T01 |
| Chr6 | CDS | 10271374 | 10271460 | 10271374 | ID=MsG0680030839.01.T01:cds;Parent=MsG0680030839.01.T01 |
| Chr6 | CDS | 10271942 | 10272091 | 10271942 | ID=MsG0680030839.01.T01:cds;Parent=MsG0680030839.01.T01 |
| Chr6 | CDS | 10272298 | 10272498 | 10272298 | ID=MsG0680030839.01.T01:cds;Parent=MsG0680030839.01.T01 |
| Chr6 | CDS | 10272832 | 10272936 | 10272832 | ID=MsG0680030839.01.T01:cds;Parent=MsG0680030839.01.T01 |
| Chr6 | three_prime_UTR | 10272937 | 10273267 | 10272937 | ID=MsG0680030839.01.T01:three_prime_utr;Parent=MsG0680030839.01.T01 |
| Gene Sequence |
| Protein sequence |
