AlfalfaGEDB | MsG0580027605.01

M. sativa cultivar ZhongmuNo.1 / MsG0580027605.01

KEGG: -
GO: GO:0004553 GO:0005975
PFAM: PF01915

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580027605.01.T01	KEH28065.1	96.714	213	7	0	1	213	375	587	7.53E-143	421

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580027605.01.T01	Q9SGZ5	60	215	82	3	1	213	363	575	1.88E-77	250

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580027605.01.T01	A0A072UQD1	96.714	213	7	0	1	213	375	587	3.60e-143	421

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047791.01	MsG0580027605.01	0.822344	2.491076e-53	2.079529e-50
MsG0080048815.01	MsG0580027605.01	0.805357	1.388407e-49	7.330180e-47
MsG0080048982.01	MsG0580027605.01	0.801808	7.560862e-49	3.644730e-46
MsG0180000205.01	MsG0580027605.01	0.803671	3.119507e-49	1.576965e-46
MsG0180000271.01	MsG0580027605.01	0.807499	4.906994e-50	2.737543e-47
MsG0180000284.01	MsG0580027605.01	0.831124	1.994084e-55	2.143819e-52
MsG0180000777.01	MsG0580027605.01	0.832790	7.729808e-56	8.730821e-53
MsG0180000982.01	MsG0580027605.01	0.826366	2.821749e-54	2.640897e-51
MsG0180001141.01	MsG0580027605.01	0.810512	1.110919e-50	6.709490e-48
MsG0180001381.01	MsG0580027605.01	0.810528	1.102049e-50	6.658718e-48
MsG0180001886.01	MsG0580027605.01	0.846539	2.038400e-59	3.520053e-56
MsG0180002459.01	MsG0580027605.01	0.815583	8.583899e-52	5.941634e-49
MsG0180003124.01	MsG0580027605.01	0.805552	1.263340e-49	6.703138e-47
MsG0180003189.01	MsG0580027605.01	0.820796	5.676032e-53	4.535986e-50
MsG0180004481.01	MsG0580027605.01	0.808206	3.470464e-50	1.972364e-47
MsG0180004725.01	MsG0580027605.01	0.810225	1.281268e-50	7.679752e-48
MsG0180004765.01	MsG0580027605.01	0.814657	1.378088e-51	9.301512e-49
MsG0180005990.01	MsG0580027605.01	0.807469	4.978208e-50	2.775150e-47
MsG0180006046.01	MsG0580027605.01	0.807989	3.860602e-50	2.181438e-47
MsG0180006050.01	MsG0580027605.01	0.806826	6.811473e-50	3.734093e-47
MsG0180006096.01	MsG0580027605.01	0.809016	2.330192e-50	1.352760e-47
MsG0180006144.01	MsG0580027605.01	0.801332	9.465793e-49	4.508407e-46
MsG0280010595.01	MsG0580027605.01	0.825488	4.561389e-54	4.163483e-51
MsG0280010702.01	MsG0580027605.01	0.839649	1.396559e-57	1.941096e-54
MsG0280010778.01	MsG0580027605.01	0.807517	4.863772e-50	2.714673e-47
MsG0280011032.01	MsG0580027605.01	0.804696	1.908200e-49	9.904729e-47
MsG0280011371.01	MsG0580027605.01	0.830819	2.368750e-55	2.523836e-52
MsG0380011704.01	MsG0580027605.01	0.809869	1.528550e-50	9.077684e-48
MsG0480018473.01	MsG0580027605.01	0.820395	7.017539e-53	5.546312e-50
MsG0480018906.01	MsG0580027605.01	0.808877	2.495559e-50	1.443351e-47
MsG0480019434.01	MsG0580027605.01	0.866319	3.109383e-65	1.043637e-61
MsG0480019435.01	MsG0580027605.01	0.809460	1.871772e-50	1.099597e-47
MsG0480020447.01	MsG0580027605.01	0.811331	7.387003e-51	4.559358e-48
MsG0480021041.01	MsG0580027605.01	0.820095	8.221321e-53	6.444311e-50
MsG0480021280.01	MsG0580027605.01	0.841149	5.659755e-58	8.241300e-55
MsG0480021451.01	MsG0580027605.01	0.811343	7.340982e-51	4.532473e-48
MsG0480021464.01	MsG0580027605.01	0.802508	5.427832e-49	2.663548e-46
MsG0480021465.01	MsG0580027605.01	0.824822	6.554206e-54	5.870469e-51
MsG0480021750.01	MsG0580027605.01	0.822927	1.822698e-53	1.546974e-50
MsG0480021994.01	MsG0580027605.01	0.811242	7.722789e-51	4.755708e-48
MsG0480022164.01	MsG0580027605.01	0.812097	5.033156e-51	3.170780e-48
MsG0480022222.01	MsG0580027605.01	0.827058	1.929391e-54	1.842036e-51
MsG0480022223.01	MsG0580027605.01	0.828388	9.244782e-55	9.175872e-52
MsG0480022750.01	MsG0580027605.01	0.806251	9.009082e-50	4.866783e-47
MsG0480022752.01	MsG0580027605.01	0.807938	3.957306e-50	2.233045e-47
MsG0480023088.01	MsG0580027605.01	0.803986	2.682856e-49	1.367393e-46
MsG0480023174.01	MsG0580027605.01	0.828999	6.576397e-55	6.643904e-52
MsG0480023356.01	MsG0580027605.01	0.816732	4.751855e-52	3.394237e-49
MsG0480023638.01	MsG0580027605.01	0.801563	8.486394e-49	4.065622e-46
MsG0480023943.01	MsG0580027605.01	0.822817	1.933143e-53	1.635644e-50
MsG0480023994.01	MsG0580027605.01	0.846509	2.077239e-59	3.583891e-56
MsG0580024274.01	MsG0580027605.01	0.811444	6.981081e-51	4.322176e-48
MsG0580024935.01	MsG0580027605.01	0.801029	1.091619e-48	5.160070e-46
MsG0580025009.01	MsG0580027605.01	0.802890	4.525501e-49	2.242543e-46
MsG0580025448.01	MsG0580027605.01	0.830741	2.475704e-55	2.631738e-52
MsG0580025756.01	MsG0580027605.01	0.842271	2.863868e-58	4.319422e-55
MsG0580026047.01	MsG0580027605.01	0.843558	1.301858e-58	2.044569e-55
MsG0380015027.01	MsG0580027605.01	0.813152	2.957945e-51	1.916561e-48
MsG0380015216.01	MsG0580027605.01	0.815831	7.555462e-52	5.265370e-49
MsG0380016133.01	MsG0580027605.01	0.829468	5.062816e-55	5.186058e-52
MsG0380016560.01	MsG0580027605.01	0.818658	1.747632e-52	1.316046e-49
MsG0380016581.01	MsG0580027605.01	0.829886	4.005976e-55	4.154231e-52
MsG0380016624.01	MsG0580027605.01	0.823663	1.226790e-53	1.063137e-50
MsG0380016923.01	MsG0580027605.01	0.804406	2.193969e-49	1.130237e-46
MsG0380017326.01	MsG0580027605.01	0.811059	8.461066e-51	5.185456e-48
MsG0380017543.01	MsG0580027605.01	0.819637	1.046195e-52	8.095387e-50
MsG0480018110.01	MsG0580027605.01	0.836562	8.702826e-57	1.100740e-53
MsG0480018163.01	MsG0580027605.01	0.807249	5.542973e-50	3.072290e-47
MsG0480018214.01	MsG0580027605.01	0.807466	4.985121e-50	2.778805e-47
MsG0580026086.01	MsG0580027605.01	0.824160	9.383995e-54	8.246368e-51
MsG0580026137.01	MsG0580027605.01	0.821191	4.602456e-53	3.719021e-50
MsG0580026301.01	MsG0580027605.01	0.833751	4.453997e-56	5.177567e-53
MsG0580026340.01	MsG0580027605.01	0.834812	2.413935e-56	2.896696e-53
MsG0580026439.01	MsG0580027605.01	0.824680	7.080366e-54	6.316105e-51
MsG0580026485.01	MsG0580027605.01	0.830831	2.353100e-55	2.508062e-52
MsG0580026718.01	MsG0580027605.01	0.839055	1.991539e-57	2.718075e-54
MsG0580027228.01	MsG0580027605.01	0.839629	1.413255e-57	1.963069e-54
MsG0580027344.01	MsG0580027605.01	0.804622	1.977037e-49	1.024193e-46
MsG0580027605.01	MsG0580027615.01	0.878474	2.726870e-69	1.425891e-65
MsG0580027605.01	MsG0580028284.01	0.813373	2.644645e-51	1.724087e-48
MsG0580027605.01	MsG0580028289.01	0.814654	1.379822e-51	9.312706e-49
MsG0580027605.01	MsG0580029717.01	0.810687	1.018208e-50	6.178749e-48
MsG0580027605.01	MsG0580029924.01	0.811048	8.505045e-51	5.211033e-48
MsG0580027605.01	MsG0580029925.01	0.812395	4.331663e-51	2.751163e-48
MsG0580027605.01	MsG0680030320.01	0.823409	1.407232e-53	1.210542e-50
MsG0580027605.01	MsG0680030351.01	0.817494	3.203592e-52	2.336664e-49
MsG0580027605.01	MsG0680030415.01	0.826745	2.291661e-54	2.168019e-51
MsG0580027605.01	MsG0680030839.01	0.856976	2.235288e-62	5.431428e-59
MsG0580027605.01	MsG0680031334.01	0.844237	8.561779e-59	1.373541e-55
MsG0580027605.01	MsG0680031355.01	0.802069	6.682702e-49	3.242908e-46
MsG0580027605.01	MsG0680031468.01	0.849110	3.991432e-60	7.487335e-57
MsG0580027605.01	MsG0680031628.01	0.803806	2.923947e-49	1.483294e-46
MsG0580027605.01	MsG0680033459.01	0.818140	2.289440e-52	1.699701e-49
MsG0580027605.01	MsG0680034190.01	0.822326	2.515347e-53	2.098654e-50
MsG0580027605.01	MsG0680034219.01	0.826327	2.882429e-54	2.694672e-51
MsG0580027605.01	MsG0680034913.01	0.809743	1.627272e-50	9.632436e-48
MsG0580027605.01	MsG0780035958.01	0.804575	2.022362e-49	1.046434e-46
MsG0580027605.01	MsG0780036078.01	0.802107	6.564161e-49	3.188393e-46
MsG0580027605.01	MsG0780038827.01	0.814925	1.201654e-51	8.169114e-49
MsG0580027605.01	MsG0780038836.01	0.805433	1.338175e-49	7.078760e-47
MsG0580027605.01	MsG0780038911.01	0.805839	1.099544e-49	5.877624e-47
MsG0580027605.01	MsG0780039143.01	0.824781	6.703088e-54	5.996617e-51
MsG0580027605.01	MsG0780039144.01	0.832912	7.210462e-56	8.173816e-53
MsG0580027605.01	MsG0780039222.01	-0.802793	4.740278e-49	2.343206e-46
MsG0580027605.01	MsG0780040384.01	0.824065	9.874925e-54	8.654391e-51
MsG0580027605.01	MsG0780040445.01	0.813813	2.116846e-51	1.396531e-48
MsG0580027605.01	MsG0780040545.01	0.840204	1.001070e-57	1.415711e-54
MsG0580027605.01	MsG0780040579.01	-0.801898	7.244005e-49	3.500114e-46
MsG0580027605.01	MsG0780041137.01	0.805419	1.347212e-49	7.123947e-47
MsG0580027605.01	MsG0780041268.01	0.804731	1.876664e-49	9.750265e-47
MsG0580027605.01	MsG0780041387.01	0.809042	2.301050e-50	1.336783e-47
MsG0580027605.01	MsG0880042031.01	0.803911	2.781298e-49	1.414845e-46
MsG0580027605.01	MsG0880042065.01	0.837995	3.740229e-57	4.942703e-54
MsG0580027605.01	MsG0880042134.01	0.810700	1.011911e-50	6.142569e-48
MsG0580027605.01	MsG0880042622.01	0.805233	1.473721e-49	7.755776e-47
MsG0580027605.01	MsG0880042857.01	0.803350	3.636182e-49	1.823024e-46
MsG0580027605.01	MsG0880043509.01	0.804113	2.524388e-49	1.290785e-46
MsG0580027605.01	MsG0880043749.01	0.819897	9.124674e-53	7.112339e-50
MsG0580027605.01	MsG0880043867.01	0.843029	1.800661e-58	2.780902e-55
MsG0580027605.01	MsG0880044394.01	0.800352	1.500823e-48	6.973072e-46
MsG0580027605.01	MsG0880044728.01	0.817830	2.690288e-52	1.980427e-49
MsG0580027605.01	MsG0880044975.01	0.817486	3.217124e-52	2.346000e-49
MsG0580027605.01	MsG0880045362.01	0.809670	1.686990e-50	9.966527e-48
MsG0580027605.01	MsG0880045535.01	0.816393	5.659423e-52	4.005271e-49
MsG0580027605.01	MsG0880045613.01	0.825075	5.711450e-54	5.152672e-51
MsG0580027605.01	MsG0880045765.01	0.808339	3.250803e-50	1.853991e-47
MsG0580027605.01	MsG0880047019.01	0.818682	1.725335e-52	1.300172e-49
MsG0580027605.01	MsG0880047038.01	0.806898	6.578843e-50	3.613140e-47
MsG0580027605.01	MsG0880047045.01	0.803371	3.600034e-49	1.805892e-46
MsG0580027605.01	MsG0880047052.01	0.819876	9.225894e-53	7.187017e-50
MsG0580027605.01	MsG0880047763.01	0.803992	2.674705e-49	1.363455e-46
MsG0280006694.01	MsG0580027605.01	0.810215	1.287862e-50	7.717173e-48
MsG0280007636.01	MsG0580027605.01	0.800049	1.729413e-48	7.973461e-46
MsG0280008417.01	MsG0580027605.01	0.853788	1.895511e-61	4.143553e-58
MsG0280008936.01	MsG0580027605.01	0.820878	5.435551e-53	4.353935e-50
MsG0280009024.01	MsG0580027605.01	0.830914	2.245776e-55	2.399614e-52
MsG0280009739.01	MsG0580027605.01	0.828592	8.251916e-55	8.238712e-52
MsG0280010205.01	MsG0580027605.01	0.806352	8.576256e-50	4.644681e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580027605.01.T01	MTR_5g062370	96.714	213	7	0	1	213	375	587	9.12e-147	421
MsG0580027605.01.T01	MTR_5g062370	96.714	213	7	0	1	213	375	587	1.91e-144	422
MsG0580027605.01.T01	MTR_5g062320	95.775	213	9	0	1	213	373	585	1.02e-142	417
MsG0580027605.01.T01	MTR_5g062430	92.958	213	15	0	1	213	375	587	1.97e-137	403
MsG0580027605.01.T01	MTR_5g062650	76.168	214	50	1	1	213	377	590	1.17e-110	334
MsG0580027605.01.T01	MTR_3g074060	70.423	213	62	1	2	213	369	581	2.23e-100	307
MsG0580027605.01.T01	MTR_7g109390	50.698	215	102	3	1	213	359	571	3.76e-63	209
MsG0580027605.01.T01	MTR_1g087240	49.302	215	105	3	1	213	354	566	1.23e-61	205
MsG0580027605.01.T01	MTR_2g008240	51.869	214	98	4	1	212	375	585	6.86e-61	203
MsG0580027605.01.T01	MTR_5g030860	49.074	216	104	4	1	213	370	582	2.21e-60	202
MsG0580027605.01.T01	MTR_4g094285	48.131	214	106	4	1	212	374	584	1.01e-58	197
MsG0580027605.01.T01	MTR_1g106860	51.628	215	99	4	2	213	361	573	3.39e-57	193
MsG0580027605.01.T01	MTR_2g034720	47.196	214	107	4	1	212	359	568	9.60e-55	186

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580027605.01.T01	AT1G78060	60.000	215	82	3	1	213	363	575	1.92e-78	250
MsG0580027605.01.T01	AT5G09700	53.271	214	96	3	1	212	120	331	6.93e-69	219
MsG0580027605.01.T01	AT5G10560	52.558	215	99	2	1	213	380	593	9.17e-69	224
MsG0580027605.01.T01	AT5G09730	52.804	214	95	4	1	212	369	578	1.74e-63	210
MsG0580027605.01.T01	AT5G64570	51.643	213	99	4	1	212	379	588	7.88e-63	206
MsG0580027605.01.T01	AT5G64570	51.643	213	99	4	1	212	221	430	1.30e-62	205
MsG0580027605.01.T01	AT5G64570	51.643	213	99	4	1	212	379	588	9.80e-62	205
MsG0580027605.01.T01	AT1G02640	50.463	216	101	5	1	213	361	573	1.64e-61	204
MsG0580027605.01.T01	AT3G19620	50.926	216	99	6	1	212	362	574	3.15e-61	204
MsG0580027605.01.T01	AT5G49360	49.074	216	102	6	1	213	367	577	2.13e-54	185

Find 49 sgRNAs with CRISPR-Local

Find 56 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAGAACTATTGATGATTTAT+TGG	0.145046	5:-64124132	None:intergenic
AATAAGTGATTATGTTATTT+TGG	0.156153	5:+64124304	MsG0580027605.01.T01:CDS
TTCTAAGAAGCCTGTTATTT+TGG	0.174390	5:+64124427	MsG0580027605.01.T01:CDS
GCTAAGAATAATGACAAAAT+TGG	0.212120	5:+64124485	MsG0580027605.01.T01:CDS
TTGATGATTTATTGGCATTA+GGG	0.250324	5:-64124124	None:intergenic
GTAAATACCCTTGGAGTTAT+AGG	0.279725	5:+64124101	MsG0580027605.01.T01:CDS
ACAAAATTGGAGGCATCATT+TGG	0.281644	5:+64124498	MsG0580027605.01.T01:CDS
ATTGATGATTTATTGGCATT+AGG	0.294469	5:-64124125	None:intergenic
TTGGACCAATTCTTCCATAT+TGG	0.298934	5:-64123977	None:intergenic
TCTTTAGAGCATACTTGATT+TGG	0.301730	5:-64123996	None:intergenic
AATTCTTCCATATTGGAGTT+TGG	0.331399	5:-64123970	None:intergenic
CACAAAATTACCAAAATAAC+AGG	0.354358	5:-64124437	None:intergenic
AAACTCCAATATGGAAGAAT+TGG	0.357083	5:+64123972	MsG0580027605.01.T01:CDS
TATCGTTCTGGATGTCTTGA+TGG	0.362209	5:+64124233	MsG0580027605.01.T01:CDS
TGGTGGAAGGGCTCTTGCTC+AGG	0.371596	5:+64124541	MsG0580027605.01.T01:CDS
AGCCAAACACATTATCGTTC+TGG	0.371977	5:+64124221	MsG0580027605.01.T01:CDS
GCTCTTGCTCAGGTTGTGTT+TGG	0.377174	5:+64124551	MsG0580027605.01.T01:CDS
ATCATTTGGGCTGGTTATCC+TGG	0.383440	5:+64124512	MsG0580027605.01.T01:CDS
AATCCAACCAAACTCCAATA+TGG	0.383933	5:+64123963	MsG0580027605.01.T01:CDS
GCTGGTTATCCTGGTGAACT+TGG	0.414067	5:+64124521	MsG0580027605.01.T01:CDS
ACTCCAAGGGTATTTACTCT+TGG	0.414446	5:-64124095	None:intergenic
ATAAGTTCCTGTTGCTTACC+TGG	0.420423	5:-64124386	None:intergenic
GTGTTTGGTGACTATAACCC+AGG	0.425278	5:+64124566	MsG0580027605.01.T01:CDS
ATAAGACTAGGCTTGTTTGA+TGG	0.425928	5:+64123939	None:intergenic
CAGCTTCAAGAGCAAGGTCT+AGG	0.436293	5:-64124022	None:intergenic
ATCCAGAACGATAATGTGTT+TGG	0.439275	5:-64124223	None:intergenic
CAAAATTGGAGGCATCATTT+GGG	0.439628	5:+64124499	MsG0580027605.01.T01:CDS
TAAGACTAGGCTTGTTTGAT+GGG	0.462964	5:+64123940	None:intergenic
TTAGCAAAAGTAATATCAAC+AGG	0.467973	5:-64124467	None:intergenic
CTTCCATATTGGAGTTTGGT+TGG	0.474146	5:-64123966	None:intergenic
AGAGTTACCAGGTAAGCAAC+AGG	0.474539	5:+64124379	MsG0580027605.01.T01:CDS
AGCATAGAAGAAAACTAACC+TGG	0.479258	5:-64124584	None:intergenic
AGGGTATTTACTCTTGGAAG+TGG	0.494590	5:-64124089	None:intergenic
GGTTATCCTGGTGAACTTGG+TGG	0.497246	5:+64124524	MsG0580027605.01.T01:CDS
ATCCTGGTGAACTTGGTGGA+AGG	0.508629	5:+64124528	MsG0580027605.01.T01:CDS
TTCTTGCAGCTTCAAGAGCA+AGG	0.526483	5:-64124028	None:intergenic
AAGAATAATGACAAAATTGG+AGG	0.530513	5:+64124488	MsG0580027605.01.T01:CDS
ATTGGAGGCATCATTTGGGC+TGG	0.536363	5:+64124503	MsG0580027605.01.T01:CDS
TCCTGGTGAACTTGGTGGAA+GGG	0.537602	5:+64124529	MsG0580027605.01.T01:CDS
TCTTGGAAGTGGGAGAATTG+AGG	0.537861	5:-64124078	None:intergenic
CTTCCAAGAGTAAATACCCT+TGG	0.550798	5:+64124092	MsG0580027605.01.T01:CDS
GCCCTTCCACCAAGTTCACC+AGG	0.555057	5:-64124530	None:intergenic
GCTCTTGAAGCTGCAAGAAG+TGG	0.571675	5:+64124032	MsG0580027605.01.T01:CDS
AGAGATCATTTAGAGTTACC+AGG	0.586212	5:+64124368	MsG0580027605.01.T01:CDS
CATTAGGGCCTATAACTCCA+AGG	0.594911	5:-64124109	None:intergenic
GGGTATTTACTCTTGGAAGT+GGG	0.605290	5:-64124088	None:intergenic
ATTGGATCAAAGTCAAGAGA+CGG	0.630240	5:+64124334	MsG0580027605.01.T01:CDS
GCATAGAAGAAAACTAACCT+GGG	0.643449	5:-64124583	None:intergenic
ATTAGGGCCTATAACTCCAA+GGG	0.662705	5:-64124108	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAAATGTATCAATCTTAAA+AGG	+	Chr5:64124182-64124201	MsG0580027605.01.T01:CDS	15.0%
!!!	AATAAGTGATTATGTTATTT+TGG	+	Chr5:64124304-64124323	MsG0580027605.01.T01:CDS	15.0%
!!!	AAATCATCAATAGTTCTTTT+AGG	+	Chr5:64124137-64124156	MsG0580027605.01.T01:CDS	20.0%
!!!	AAGAACTATTGATGATTTAT+TGG	-	Chr5:64124135-64124154	None:intergenic	20.0%
!!!	AAGATTGATACATTTTTACA+AGG	-	Chr5:64124179-64124198	None:intergenic	20.0%
!!!	GATTATGTTATTTTGGTTAT+GGG	+	Chr5:64124311-64124330	MsG0580027605.01.T01:CDS	20.0%
!!!	TGATTATGTTATTTTGGTTA+TGG	+	Chr5:64124310-64124329	MsG0580027605.01.T01:CDS	20.0%
!	AAGAATAATGACAAAATTGG+AGG	+	Chr5:64124488-64124507	MsG0580027605.01.T01:CDS	25.0%
!	CACAAAATTACCAAAATAAC+AGG	-	Chr5:64124440-64124459	None:intergenic	25.0%
!	GCTAAGAATAATGACAAAAT+TGG	+	Chr5:64124485-64124504	MsG0580027605.01.T01:CDS	25.0%
!	TTAGCAAAAGTAATATCAAC+AGG	-	Chr5:64124470-64124489	None:intergenic	25.0%
!!	ATTGATACATTTTTACAAGG+AGG	-	Chr5:64124176-64124195	None:intergenic	25.0%
!!	ATTGATGATTTATTGGCATT+AGG	-	Chr5:64124128-64124147	None:intergenic	25.0%
!!	TTGATGATTTATTGGCATTA+GGG	-	Chr5:64124127-64124146	None:intergenic	25.0%
!!!	GTTATTTTGGTAATTTTGTG+TGG	+	Chr5:64124440-64124459	MsG0580027605.01.T01:CDS	25.0%
!!!	GTTCTTTTAGGAAACTATAT+TGG	+	Chr5:64124149-64124168	MsG0580027605.01.T01:CDS	25.0%
	AAACTCCAATATGGAAGAAT+TGG	+	Chr5:64123972-64123991	MsG0580027605.01.T01:CDS	30.0%
	AATTCTTCCATATTGGAGTT+TGG	-	Chr5:64123973-64123992	None:intergenic	30.0%
!!	ATTTTGGTAATTTTGTGTGG+TGG	+	Chr5:64124443-64124462	MsG0580027605.01.T01:CDS	30.0%
!!	TCTTTAGAGCATACTTGATT+TGG	-	Chr5:64123999-64124018	None:intergenic	30.0%
!!	TTCTAAGAAGCCTGTTATTT+TGG	+	Chr5:64124427-64124446	MsG0580027605.01.T01:CDS	30.0%
!!!	TGTTATTTTGGTTATGGGAT+TGG	+	Chr5:64124316-64124335	MsG0580027605.01.T01:CDS	30.0%
	AATCCAACCAAACTCCAATA+TGG	+	Chr5:64123963-64123982	MsG0580027605.01.T01:CDS	35.0%
	ATCCAGAACGATAATGTGTT+TGG	-	Chr5:64124226-64124245	None:intergenic	35.0%
	ATTGGATCAAAGTCAAGAGA+CGG	+	Chr5:64124334-64124353	MsG0580027605.01.T01:CDS	35.0%
	GTAAATACCCTTGGAGTTAT+AGG	+	Chr5:64124101-64124120	MsG0580027605.01.T01:CDS	35.0%
	TTGGACCAATTCTTCCATAT+TGG	-	Chr5:64123980-64123999	None:intergenic	35.0%
!	AGAGATCATTTAGAGTTACC+AGG	+	Chr5:64124368-64124387	MsG0580027605.01.T01:CDS	35.0%
!	TTTTAGCAACTTCAACTGCT+TGG	-	Chr5:64124286-64124305	None:intergenic	35.0%
!!	ACAAAATTGGAGGCATCATT+TGG	+	Chr5:64124498-64124517	MsG0580027605.01.T01:CDS	35.0%
!!	CAAAATTGGAGGCATCATTT+GGG	+	Chr5:64124499-64124518	MsG0580027605.01.T01:CDS	35.0%
	AGCCAAACACATTATCGTTC+TGG	+	Chr5:64124221-64124240	MsG0580027605.01.T01:CDS	40.0%
	ATTAGGGCCTATAACTCCAA+GGG	-	Chr5:64124111-64124130	None:intergenic	40.0%
	CTTCCAAGAGTAAATACCCT+TGG	+	Chr5:64124092-64124111	MsG0580027605.01.T01:CDS	40.0%
	CTTCCATATTGGAGTTTGGT+TGG	-	Chr5:64123969-64123988	None:intergenic	40.0%
	GGGTATTTACTCTTGGAAGT+GGG	-	Chr5:64124091-64124110	None:intergenic	40.0%
!	AGGGTATTTACTCTTGGAAG+TGG	-	Chr5:64124092-64124111	None:intergenic	40.0%
!	ATAAGTTCCTGTTGCTTACC+TGG	-	Chr5:64124389-64124408	None:intergenic	40.0%
!	TATCGTTCTGGATGTCTTGA+TGG	+	Chr5:64124233-64124252	MsG0580027605.01.T01:CDS	40.0%
!!	ACTCCAAGGGTATTTACTCT+TGG	-	Chr5:64124098-64124117	None:intergenic	40.0%
	AGAGTTACCAGGTAAGCAAC+AGG	+	Chr5:64124379-64124398	MsG0580027605.01.T01:CDS	45.0%
	CATTAGGGCCTATAACTCCA+AGG	-	Chr5:64124112-64124131	None:intergenic	45.0%
	TCTTGGAAGTGGGAGAATTG+AGG	-	Chr5:64124081-64124100	None:intergenic	45.0%
	TTCTTGCAGCTTCAAGAGCA+AGG	-	Chr5:64124031-64124050	None:intergenic	45.0%
!	GTGTTTGGTGACTATAACCC+AGG	+	Chr5:64124566-64124585	MsG0580027605.01.T01:CDS	45.0%
!!	ATCATTTGGGCTGGTTATCC+TGG	+	Chr5:64124512-64124531	MsG0580027605.01.T01:CDS	45.0%
	CAGCTTCAAGAGCAAGGTCT+AGG	-	Chr5:64124025-64124044	None:intergenic	50.0%
	GCTCTTGAAGCTGCAAGAAG+TGG	+	Chr5:64124032-64124051	MsG0580027605.01.T01:CDS	50.0%
	GCTGGTTATCCTGGTGAACT+TGG	+	Chr5:64124521-64124540	MsG0580027605.01.T01:CDS	50.0%
	GGTTATCCTGGTGAACTTGG+TGG	+	Chr5:64124524-64124543	MsG0580027605.01.T01:CDS	50.0%
!	ATCCTGGTGAACTTGGTGGA+AGG	+	Chr5:64124528-64124547	MsG0580027605.01.T01:CDS	50.0%
!	GCTCTTGCTCAGGTTGTGTT+TGG	+	Chr5:64124551-64124570	MsG0580027605.01.T01:CDS	50.0%
!	TCCTGGTGAACTTGGTGGAA+GGG	+	Chr5:64124529-64124548	MsG0580027605.01.T01:CDS	50.0%
!!	ATTGGAGGCATCATTTGGGC+TGG	+	Chr5:64124503-64124522	MsG0580027605.01.T01:CDS	50.0%
	GCCCTTCCACCAAGTTCACC+AGG	-	Chr5:64124533-64124552	None:intergenic	60.0%
	TGGTGGAAGGGCTCTTGCTC+AGG	+	Chr5:64124541-64124560	MsG0580027605.01.T01:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	64123951	64124592	64123951	ID=MsG0580027605.01;Name=MsG0580027605.01
Chr5	mRNA	64123951	64124592	64123951	ID=MsG0580027605.01.T01;Parent=MsG0580027605.01;Name=MsG0580027605.01.T01;_AED=0.23;_eAED=0.23;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|213
Chr5	exon	64123951	64124592	64123951	ID=MsG0580027605.01.T01:exon:4510;Parent=MsG0580027605.01.T01
Chr5	CDS	64123951	64124592	64123951	ID=MsG0580027605.01.T01:cds;Parent=MsG0580027605.01.T01

Gene Sequence

>MsG0580027605.01.T01

TTGTTTGATGGGAATCCAACCAAACTCCAATATGGAAGAATTGGTCCAAATCAAGTATGCTCTAAAGAAAACCTAGACCTTGCTCTTGAAGCTGCAAGAAGTGGCATTGTACTTTTAAAAAACACTGCCTCAATTCTCCCACTTCCAAGAGTAAATACCCTTGGAGTTATAGGCCCTAATGCCAATAAATCATCAATAGTTCTTTTAGGAAACTATATTGGTCCTCCTTGTAAAAATGTATCAATCTTAAAAGGCTTTTACACTTATGCTAGCCAAACACATTATCGTTCTGGATGTCTTGATGGAACAAAGTGTGTTTCAGCTGAAATTGACCAAGCAGTTGAAGTTGCTAAAATAAGTGATTATGTTATTTTGGTTATGGGATTGGATCAAAGTCAAGAGACGGAAACACTTGACAGAGATCATTTAGAGTTACCAGGTAAGCAACAGGAACTTATTAAAAGTGTTGCTAAAGCTTCTAAGAAGCCTGTTATTTTGGTAATTTTGTGTGGTGGTCCTGTTGATATTACTTTTGCTAAGAATAATGACAAAATTGGAGGCATCATTTGGGCTGGTTATCCTGGTGAACTTGGTGGAAGGGCTCTTGCTCAGGTTGTGTTTGGTGACTATAACCCAGGTTAG

Protein sequence

>MsG0580027605.01.T01

LFDGNPTKLQYGRIGPNQVCSKENLDLALEAARSGIVLLKNTASILPLPRVNTLGVIGPNANKSSIVLLGNYIGPPCKNVSILKGFYTYASQTHYRSGCLDGTKCVSAEIDQAVEVAKISDYVILVMGLDQSQETETLDRDHLELPGKQQELIKSVAKASKKPVILVILCGGPVDITFAKNNDKIGGIIWAGYPGELGGRALAQVVFGDYNPG*