AlfalfaGEDB | MsG0480020923.01

M. sativa cultivar ZhongmuNo.1 / MsG0480020923.01

KEGG: -
GO: GO:0003676
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480020923.01.T01	ACL97383.1	96.457	254	9	0	1	254	1052	1305	3.22E-172	519

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480020923.01.T01	P10978	56.175	251	110	0	1	251	1075	1325	1.77E-99	319

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480020923.01.T01	B8YLY3	96.457	254	9	0	1	254	1052	1305	1.54e-172	519

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048177.01	MsG0480020923.01	0.805850	1.093615e-49	5.847799e-47
MsG0080048178.01	MsG0480020923.01	0.810516	1.108736e-50	6.697103e-48
MsG0080048830.01	MsG0480020923.01	0.849510	3.087177e-60	5.865881e-57
MsG0180000494.01	MsG0480020923.01	0.813368	2.652270e-51	1.728791e-48
MsG0180000555.01	MsG0480020923.01	0.819184	1.326740e-52	1.013769e-49
MsG0180000585.01	MsG0480020923.01	0.810243	1.270146e-50	7.616886e-48
MsG0180000680.01	MsG0480020923.01	0.804333	2.272266e-49	1.168399e-46
MsG0180000855.01	MsG0480020923.01	0.812417	4.285124e-51	2.723168e-48
MsG0180001312.01	MsG0480020923.01	0.806083	9.772892e-50	5.256634e-47
MsG0180001922.01	MsG0480020923.01	0.859541	3.851232e-63	1.020671e-59
MsG0180002709.01	MsG0480020923.01	0.803803	2.928274e-49	1.485380e-46
MsG0180003744.01	MsG0480020923.01	0.804861	1.762935e-49	9.190054e-47
MsG0180004372.01	MsG0480020923.01	0.801971	6.997965e-49	3.387240e-46
MsG0180004449.01	MsG0480020923.01	0.807028	6.175005e-50	3.402904e-47
MsG0180005354.01	MsG0480020923.01	0.802091	6.614330e-49	3.211497e-46
MsG0180005773.01	MsG0480020923.01	0.841987	3.404165e-58	5.088534e-55
MsG0180005944.01	MsG0480020923.01	0.836445	9.318673e-57	1.174651e-53
MsG0180006016.01	MsG0480020923.01	0.820133	8.055600e-53	6.321086e-50
MsG0180006050.01	MsG0480020923.01	0.831079	2.045749e-55	2.196501e-52
MsG0280006440.01	MsG0480020923.01	0.801229	9.938108e-49	4.721062e-46
MsG0280010784.01	MsG0480020923.01	0.823427	1.392989e-53	1.198974e-50
MsG0280010816.01	MsG0480020923.01	0.811299	7.503688e-51	4.627627e-48
MsG0280010901.01	MsG0480020923.01	0.806001	1.016562e-49	5.456811e-47
MsG0280010976.01	MsG0480020923.01	0.807771	4.294370e-50	2.412703e-47
MsG0280011043.01	MsG0480020923.01	0.807151	5.814861e-50	3.214660e-47
MsG0280011131.01	MsG0480020923.01	0.831721	1.421648e-55	1.555982e-52
MsG0280011410.01	MsG0480020923.01	0.806133	9.539161e-50	5.137406e-47
MsG0380011663.01	MsG0480020923.01	0.806876	6.649704e-50	3.650070e-47
MsG0380011729.01	MsG0480020923.01	0.801455	8.930684e-49	4.266792e-46
MsG0380012458.01	MsG0480020923.01	0.814163	1.771933e-51	1.180099e-48
MsG0380014913.01	MsG0480020923.01	0.816111	6.543767e-52	4.595577e-49
MsG0480018460.01	MsG0480020923.01	0.813966	1.958053e-51	1.297159e-48
MsG0480019289.01	MsG0480020923.01	0.829317	5.507508e-55	5.617932e-52
MsG0480020416.01	MsG0480020923.01	0.805511	1.288340e-49	6.828631e-47
MsG0480020719.01	MsG0480020923.01	0.809938	1.477513e-50	8.790417e-48
MsG0480020923.01	MsG0480021240.01	0.821540	3.823892e-53	3.119858e-50
MsG0480020923.01	MsG0480022026.01	0.801517	8.675333e-49	4.151317e-46
MsG0480020923.01	MsG0480022318.01	0.807619	4.626754e-50	2.589137e-47
MsG0480020923.01	MsG0480022392.01	-0.800225	1.592910e-48	7.376942e-46
MsG0480020923.01	MsG0480022678.01	0.809687	1.672583e-50	9.885810e-48
MsG0480020923.01	MsG0480023224.01	0.824804	6.617370e-54	5.924120e-51
MsG0480020923.01	MsG0480023245.01	0.814273	1.675414e-51	1.119192e-48
MsG0480020923.01	MsG0480023270.01	0.801147	1.032851e-48	4.896556e-46
MsG0480020923.01	MsG0480023412.01	0.808341	3.247646e-50	1.852309e-47
MsG0480020923.01	MsG0480023517.01	0.842495	2.497022e-58	3.792963e-55
MsG0480020923.01	MsG0480023554.01	0.825765	3.920322e-54	3.606922e-51
MsG0480020923.01	MsG0480023729.01	0.818997	1.463780e-52	1.112852e-49
MsG0480020923.01	MsG0580024205.01	0.807369	5.228828e-50	2.907084e-47
MsG0480020923.01	MsG0580024581.01	0.815021	1.144366e-51	7.800392e-49
MsG0480020923.01	MsG0580025009.01	0.801867	7.352627e-49	3.549816e-46
MsG0480020923.01	MsG0580025026.01	0.813861	2.065264e-51	1.364268e-48
MsG0480020923.01	MsG0580025278.01	0.824699	7.005912e-54	6.253174e-51
MsG0480020923.01	MsG0580025328.01	0.802625	5.133592e-49	2.526671e-46
MsG0480020923.01	MsG0580025453.01	0.800326	1.518712e-48	7.051770e-46
MsG0480020923.01	MsG0580026596.01	0.836961	6.882865e-57	8.811846e-54
MsG0480020923.01	MsG0580027476.01	0.809230	2.097346e-50	1.224634e-47
MsG0480020923.01	MsG0580029629.01	0.817376	3.404460e-52	2.475237e-49
MsG0480020923.01	MsG0580029639.01	0.811962	5.384648e-51	3.379766e-48
MsG0480020923.01	MsG0580029758.01	0.805894	1.070656e-49	5.731181e-47
MsG0480020923.01	MsG0680030351.01	0.801370	9.299569e-49	4.433567e-46
MsG0480020923.01	MsG0680030841.01	0.801914	7.192327e-49	3.476417e-46
MsG0480020923.01	MsG0780035958.01	0.816457	5.476709e-52	3.882436e-49
MsG0480020923.01	MsG0780036633.01	0.800535	1.376889e-48	6.426906e-46
MsG0480020923.01	MsG0780036635.01	0.805914	1.060417e-49	5.679363e-47
MsG0480020923.01	MsG0780038092.01	0.804719	1.887684e-49	9.804236e-47
MsG0480020923.01	MsG0780038836.01	0.800971	1.121765e-48	5.294680e-46
MsG0480020923.01	MsG0780039405.01	0.819309	1.243059e-52	9.530530e-50
MsG0480020923.01	MsG0780039777.01	0.801538	8.589539e-49	4.112373e-46
MsG0480020923.01	MsG0780039900.01	0.803052	4.189303e-49	2.084410e-46
MsG0480020923.01	MsG0780040125.01	0.814311	1.643517e-51	1.099044e-48
MsG0480020923.01	MsG0780040505.01	0.805816	1.112179e-49	5.941530e-47
MsG0480020923.01	MsG0780040516.01	0.806219	9.147608e-50	4.937633e-47
MsG0480020923.01	MsG0780040679.01	0.825096	5.646249e-54	5.096893e-51
MsG0480020923.01	MsG0780040742.01	0.825308	5.030931e-54	4.568700e-51
MsG0480020923.01	MsG0780040758.01	0.841773	3.877109e-58	5.756467e-55
MsG0480020923.01	MsG0780041161.01	0.811133	8.154338e-51	5.007170e-48
MsG0480020923.01	MsG0780041210.01	0.808430	3.109705e-50	1.777723e-47
MsG0480020923.01	MsG0780041368.01	0.811456	6.937636e-51	4.296624e-48
MsG0480020923.01	MsG0780041370.01	0.807384	5.189740e-50	2.886573e-47
MsG0480020923.01	MsG0880042329.01	0.802675	5.012469e-49	2.470204e-46
MsG0480020923.01	MsG0880043001.01	0.825188	5.369916e-54	4.860257e-51
MsG0480020923.01	MsG0880043059.01	0.815454	9.168812e-52	6.324441e-49
MsG0480020923.01	MsG0880043116.01	0.838488	2.791638e-57	3.744751e-54
MsG0480020923.01	MsG0880043162.01	0.808876	2.496694e-50	1.443966e-47
MsG0480020923.01	MsG0880043341.01	0.812385	4.353211e-51	2.763981e-48
MsG0480020923.01	MsG0880043522.01	0.800564	1.358527e-48	6.345849e-46
MsG0480020923.01	MsG0880044732.01	0.806018	1.008397e-49	5.415137e-47
MsG0480020923.01	MsG0880045106.01	0.833135	6.344093e-56	7.240825e-53
MsG0480020923.01	MsG0880046209.01	0.813807	2.123092e-51	1.400452e-48
MsG0480020923.01	MsG0880046244.01	0.855090	7.962815e-62	1.817149e-58
MsG0480020923.01	MsG0880046329.01	0.852453	4.571904e-61	9.557198e-58
MsG0480020923.01	MsG0880046404.01	0.813962	1.962514e-51	1.299930e-48
MsG0480020923.01	MsG0880046733.01	0.807916	4.000627e-50	2.256106e-47
MsG0480020923.01	MsG0880047019.01	0.829528	4.893767e-55	5.021687e-52
MsG0480020923.01	MsG0880047497.01	0.800223	1.593678e-48	7.380257e-46
MsG0380015607.01	MsG0480020923.01	0.809190	2.138849e-50	1.247539e-47
MsG0380015614.01	MsG0480020923.01	0.832329	1.005695e-55	1.120339e-52
MsG0380016223.01	MsG0480020923.01	0.829469	5.057741e-55	5.181109e-52
MsG0380017003.01	MsG0480020923.01	0.801624	8.248204e-49	3.957370e-46
MsG0380017229.01	MsG0480020923.01	0.806977	6.328859e-50	3.483059e-47
MsG0380017403.01	MsG0480020923.01	0.800528	1.381586e-48	6.447621e-46
MsG0480018332.01	MsG0480020923.01	0.801918	7.176173e-49	3.468998e-46
MsG0280006595.01	MsG0480020923.01	0.805002	1.646844e-49	8.615716e-47
MsG0280006892.01	MsG0480020923.01	0.819202	1.314769e-52	1.005100e-49
MsG0280006906.01	MsG0480020923.01	0.820643	6.154377e-53	4.897047e-50
MsG0280006935.01	MsG0480020923.01	0.838619	2.582559e-57	3.478366e-54
MsG0280007549.01	MsG0480020923.01	0.809078	2.259706e-50	1.314066e-47
MsG0280007585.01	MsG0480020923.01	0.809409	1.919005e-50	1.125903e-47
MsG0280007691.01	MsG0480020923.01	0.807983	3.870996e-50	2.186963e-47
MsG0280008295.01	MsG0480020923.01	0.831049	2.079884e-55	2.231192e-52
MsG0280008502.01	MsG0480020923.01	0.820922	5.310504e-53	4.258965e-50
MsG0280008720.01	MsG0480020923.01	0.800798	1.216847e-48	5.717924e-46
MsG0280009235.01	MsG0480020923.01	0.806460	8.138819e-50	4.420153e-47
MsG0280009598.01	MsG0480020923.01	0.813992	1.933000e-51	1.281387e-48
MsG0280010416.01	MsG0480020923.01	0.812517	4.075045e-51	2.596427e-48

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480020923.01.T01	MTR_6g472230	42.051	195	110	3	45	237	1	194	4.11e-46	165
MsG0480020923.01.T01	MTR_3g093120	35.743	249	150	6	5	251	287	527	7.11e-45	158
MsG0480020923.01.T01	MTR_3g022740	33.659	205	87	4	38	242	5	160	6.19e-30	118
MsG0480020923.01.T01	MTR_3g448730	33.607	122	81	0	130	251	101	222	1.98e-26	103
MsG0480020923.01.T01	MTR_3g452820	32.222	180	83	4	37	216	21	161	2.50e-23	94.0
MsG0480020923.01.T01	MTR_8g059225	35.577	104	67	0	112	215	71	174	6.35e-23	92.4
MsG0480020923.01.T01	MTR_7g026095	36.641	131	81	2	41	170	30	159	1.20e-20	89.7
MsG0480020923.01.T01	MTR_6g033925	35.915	142	86	3	13	153	1	138	4.62e-20	85.9
MsG0480020923.01.T01	MTR_2g075320	28.505	214	121	5	41	253	105	287	7.65e-19	84.3
MsG0480020923.01.T01	MTR_6g060522	34.746	118	76	1	138	254	3	120	7.77e-18	79.3
MsG0480020923.01.T01	MTR_7g056567	34.234	111	72	1	144	253	24	134	9.23e-17	75.9
MsG0480020923.01.T01	MTR_8g011410	30.337	178	101	4	67	242	815	971	3.78e-16	78.2
MsG0480020923.01.T01	MTR_2g460640	36.111	108	62	3	11	117	1	102	2.20e-15	71.6
MsG0480020923.01.T01	MTR_1g051400	35.556	90	57	1	81	169	73	162	1.13e-14	70.5
MsG0480020923.01.T01	MTR_7g056447	37.037	81	51	0	173	253	212	292	1.34e-14	72.4
MsG0480020923.01.T01	MTR_2g017850	21.608	199	110	3	58	254	187	341	4.66e-12	65.5
MsG0480020923.01.T01	MTR_0303s0010	41.791	67	39	0	96	162	98	164	2.06e-11	61.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480020923.01.T01	AT4G23160	36.667	210	124	4	4	211	351	553	1.40e-31	123
MsG0480020923.01.T01	AT4G23160	36.667	210	124	4	4	211	351	553	1.40e-31	123

Find 70 sgRNAs with CRISPR-Local

Find 71 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGGATTGGTTAGTCGGTTTA+TGG	0.209777	4:+50623313	MsG0480020923.01.T01:CDS
ACAGGAAGTGGGGTAGAAAT+TGG	0.289482	4:-50623152	None:intergenic
TATTTGGATGCAAAGGTTAA+TGG	0.314202	4:+50623616	MsG0480020923.01.T01:CDS
GGTTATGTGTTCACGCTTGC+TGG	0.317322	4:+50623497	MsG0480020923.01.T01:CDS
AAGCGTGTAAGGAAGCTATT+TGG	0.329376	4:+50623600	MsG0480020923.01.T01:CDS
AGAATCATGAGGTACATTAA+AGG	0.348284	4:+50623371	MsG0480020923.01.T01:CDS
TAGTCGGTTTATGGCGGATC+CGG	0.358965	4:+50623322	MsG0480020923.01.T01:CDS
TCGATCCTCATATGGCCTAT+TGG	0.390032	4:+50623871	MsG0480020923.01.T01:CDS
TCAGGTGTTGCAATATGTTT+CGG	0.402671	4:+50623398	MsG0480020923.01.T01:CDS
CCCACTGCTTGTGCAATGTC+TGG	0.403345	4:-50623293	None:intergenic
ATCCTCTCCGCTTCGTTGCT+AGG	0.409917	4:-50623203	None:intergenic
TACATCTGCTAGGTTATCAT+TGG	0.424692	4:-50623810	None:intergenic
TTTGTTCTTGAATGAAAAGC+TGG	0.436926	4:-50623713	None:intergenic
AAATAGCTTCCTTACACGCT+TGG	0.437349	4:-50623598	None:intergenic
TCAGTCGCTACGTTTCCAAT+AGG	0.437994	4:-50623886	None:intergenic
TGTTCGAGAAGTAGTAGAGG+AGG	0.444479	4:+50623760	MsG0480020923.01.T01:CDS
GGCAGCTACCCAAGCGTGTA+AGG	0.445104	4:+50623589	MsG0480020923.01.T01:CDS
AGCTACAACTGGTTGTAACT+TGG	0.445412	4:-50623540	None:intergenic
AATTTAAAATTCACAGGAAG+TGG	0.448026	4:-50623164	None:intergenic
GTATGGTGTCGATCCTCATA+TGG	0.454773	4:+50623863	MsG0480020923.01.T01:CDS
GTCGTTGACAGAGCTACAAC+TGG	0.468469	4:-50623551	None:intergenic
AATAGCTTCCTTACACGCTT+GGG	0.469268	4:-50623597	None:intergenic
GTTCGAGAAGTAGTAGAGGA+GGG	0.470336	4:+50623761	MsG0480020923.01.T01:CDS
AGTAGTAGAGGAGGGGAGTG+TGG	0.471646	4:+50623769	MsG0480020923.01.T01:CDS
CATTGCACAAGCAGTGGGAT+TGG	0.476054	4:+50623298	MsG0480020923.01.T01:CDS
TACATATCATGGCATACATA+AGG	0.477860	4:-50623265	None:intergenic
AGTCGGTTTATGGCGGATCC+GGG	0.479418	4:+50623323	MsG0480020923.01.T01:CDS
AAGCAGTGGGATTGGTTAGT+CGG	0.481735	4:+50623306	MsG0480020923.01.T01:CDS
CGTTTCCAATAGGCCATATG+AGG	0.487317	4:-50623876	None:intergenic
TTCGAGAAGTAGTAGAGGAG+GGG	0.490811	4:+50623762	MsG0480020923.01.T01:CDS
GTCTGGTCTTGTACATATCA+TGG	0.492315	4:-50623276	None:intergenic
GATAAAAGAAAATCTACTAC+TGG	0.492564	4:+50623476	MsG0480020923.01.T01:CDS
GAGGATAATTTAAAATTCAC+AGG	0.497866	4:-50623170	None:intergenic
CATTCAAGAACAAAATACAT+AGG	0.502125	4:+50623722	MsG0480020923.01.T01:CDS
GTCTCGAGTACCGTATGAAT+CGG	0.503843	4:+50623232	MsG0480020923.01.T01:CDS
CAAAGGTTAATGGAGGAACT+CGG	0.514212	4:+50623626	MsG0480020923.01.T01:CDS
GAGGATCAGAGTTAACTGTC+AGG	0.516487	4:+50623420	MsG0480020923.01.T01:CDS
CGGATCCGGGTAAAGAGCAT+TGG	0.525904	4:+50623336	MsG0480020923.01.T01:CDS
TTGCTGGAGGAGCAGTAAGT+TGG	0.528057	4:+50623513	MsG0480020923.01.T01:CDS
AGGTACATTAAAGGAACCTC+AGG	0.532112	4:+50623380	MsG0480020923.01.T01:CDS
ATTTAAAATTCACAGGAAGT+GGG	0.535808	4:-50623163	None:intergenic
TCAACGCTGACAAGTTTGTA+TGG	0.540945	4:+50623846	MsG0480020923.01.T01:CDS
AACGACAGAAGCTGAGTACA+TGG	0.553131	4:+50623568	MsG0480020923.01.T01:CDS
TAGCAACGAAGCGGAGAGGA+TGG	0.554421	4:+50623205	MsG0480020923.01.T01:CDS
CTTCCCACCGCCGATTCATA+CGG	0.557007	4:-50623242	None:intergenic
ACCAGACATTGCACAAGCAG+TGG	0.557126	4:+50623292	MsG0480020923.01.T01:CDS
AGGAAGCTATTTGGATGCAA+AGG	0.561391	4:+50623609	MsG0480020923.01.T01:CDS
GCATTCCAATGCTCTTTACC+CGG	0.576147	4:-50623341	None:intergenic
ACTTTGTCATTACATCTGCT+AGG	0.578060	4:-50623820	None:intergenic
TTTAAAATTCACAGGAAGTG+GGG	0.578255	4:-50623162	None:intergenic
AGGATCAGAGTTAACTGTCA+GGG	0.582959	4:+50623421	MsG0480020923.01.T01:CDS
GGAGGAACTCGGGCACAAGC+AGG	0.583526	4:+50623637	MsG0480020923.01.T01:CDS
AGAGTGCCTTGCATATTGCA+AGG	0.594651	4:+50623687	MsG0480020923.01.T01:CDS
AGTACCGTATGAATCGGCGG+TGG	0.599601	4:+50623238	MsG0480020923.01.T01:CDS
ATTGGTTAGTCGGTTTATGG+CGG	0.603784	4:+50623316	MsG0480020923.01.T01:CDS
CCAGACATTGCACAAGCAGT+GGG	0.614822	4:+50623293	MsG0480020923.01.T01:CDS
TTGGATGCAAAGGTTAATGG+AGG	0.617483	4:+50623619	MsG0480020923.01.T01:CDS
AAAGGTTAATGGAGGAACTC+GGG	0.623045	4:+50623627	MsG0480020923.01.T01:CDS
TGGATCCCTTGCAATATGCA+AGG	0.625026	4:-50623693	None:intergenic
GAGTGCCTTGCATATTGCAA+GGG	0.638056	4:+50623688	MsG0480020923.01.T01:CDS
GTTGCTAGGACTCATACTTG+AGG	0.638288	4:-50623189	None:intergenic
GTACCGTATGAATCGGCGGT+GGG	0.638767	4:+50623239	MsG0480020923.01.T01:CDS
GGTGTTGCAATATGTTTCGG+AGG	0.640818	4:+50623401	MsG0480020923.01.T01:CDS
TATGTGTTCACGCTTGCTGG+AGG	0.654870	4:+50623500	MsG0480020923.01.T01:CDS
TATGAGTCCTAGCAACGAAG+CGG	0.667310	4:+50623196	MsG0480020923.01.T01:CDS
GGATCAGAGTTAACTGTCAG+GGG	0.668527	4:+50623422	MsG0480020923.01.T01:CDS
GTCCTAGCAACGAAGCGGAG+AGG	0.675999	4:+50623201	MsG0480020923.01.T01:CDS
TCGAGTACCGTATGAATCGG+CGG	0.678195	4:+50623235	MsG0480020923.01.T01:CDS
GAAACATATTGCAACACCTG+AGG	0.695845	4:-50623396	None:intergenic
ATGCTGTTAAAAGAATCATG+AGG	0.723101	4:+50623360	MsG0480020923.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	CATTCAAGAACAAAATACAT+AGG	+	Chr4:50623722-50623741	MsG0480020923.01.T01:CDS	25.0%
!	GATAAAAGAAAATCTACTAC+TGG	+	Chr4:50623476-50623495	MsG0480020923.01.T01:CDS	25.0%
!!	AATTTAAAATTCACAGGAAG+TGG	-	Chr4:50623167-50623186	None:intergenic	25.0%
!!	ATTTAAAATTCACAGGAAGT+GGG	-	Chr4:50623166-50623185	None:intergenic	25.0%
!!	GAGGATAATTTAAAATTCAC+AGG	-	Chr4:50623173-50623192	None:intergenic	25.0%
	AGAATCATGAGGTACATTAA+AGG	+	Chr4:50623371-50623390	MsG0480020923.01.T01:CDS	30.0%
	ATGCTGTTAAAAGAATCATG+AGG	+	Chr4:50623360-50623379	MsG0480020923.01.T01:CDS	30.0%
	TACATATCATGGCATACATA+AGG	-	Chr4:50623268-50623287	None:intergenic	30.0%
	TATTTGGATGCAAAGGTTAA+TGG	+	Chr4:50623616-50623635	MsG0480020923.01.T01:CDS	30.0%
	TTTGTTCTTGAATGAAAAGC+TGG	-	Chr4:50623716-50623735	None:intergenic	30.0%
!	TTTAAAATTCACAGGAAGTG+GGG	-	Chr4:50623165-50623184	None:intergenic	30.0%
!!!	TATGTTGATTCAGATTTTGC+AGG	+	Chr4:50623446-50623465	MsG0480020923.01.T01:CDS	30.0%
	ACTTTGTCATTACATCTGCT+AGG	-	Chr4:50623823-50623842	None:intergenic	35.0%
	TACATCTGCTAGGTTATCAT+TGG	-	Chr4:50623813-50623832	None:intergenic	35.0%
!	TCAGGTGTTGCAATATGTTT+CGG	+	Chr4:50623398-50623417	MsG0480020923.01.T01:CDS	35.0%
!	TTTTGTTCGAGAAGTAGTAG+AGG	+	Chr4:50623757-50623776	MsG0480020923.01.T01:CDS	35.0%
	AAAGGTTAATGGAGGAACTC+GGG	+	Chr4:50623627-50623646	MsG0480020923.01.T01:CDS	40.0%
	AAATAGCTTCCTTACACGCT+TGG	-	Chr4:50623601-50623620	None:intergenic	40.0%
	AAGCGTGTAAGGAAGCTATT+TGG	+	Chr4:50623600-50623619	MsG0480020923.01.T01:CDS	40.0%
	AATAGCTTCCTTACACGCTT+GGG	-	Chr4:50623600-50623619	None:intergenic	40.0%
	AGCTACAACTGGTTGTAACT+TGG	-	Chr4:50623543-50623562	None:intergenic	40.0%
	AGGAAGCTATTTGGATGCAA+AGG	+	Chr4:50623609-50623628	MsG0480020923.01.T01:CDS	40.0%
	AGGATCAGAGTTAACTGTCA+GGG	+	Chr4:50623421-50623440	MsG0480020923.01.T01:CDS	40.0%
	AGGTACATTAAAGGAACCTC+AGG	+	Chr4:50623380-50623399	MsG0480020923.01.T01:CDS	40.0%
	CAAAGGTTAATGGAGGAACT+CGG	+	Chr4:50623626-50623645	MsG0480020923.01.T01:CDS	40.0%
	GAAACATATTGCAACACCTG+AGG	-	Chr4:50623399-50623418	None:intergenic	40.0%
	TCAACGCTGACAAGTTTGTA+TGG	+	Chr4:50623846-50623865	MsG0480020923.01.T01:CDS	40.0%
	TTGGATGCAAAGGTTAATGG+AGG	+	Chr4:50623619-50623638	MsG0480020923.01.T01:CDS	40.0%
!	ATTGGTTAGTCGGTTTATGG+CGG	+	Chr4:50623316-50623335	MsG0480020923.01.T01:CDS	40.0%
!!	GTCTGGTCTTGTACATATCA+TGG	-	Chr4:50623279-50623298	None:intergenic	40.0%
	AACGACAGAAGCTGAGTACA+TGG	+	Chr4:50623568-50623587	MsG0480020923.01.T01:CDS	45.0%
	ACAGGAAGTGGGGTAGAAAT+TGG	-	Chr4:50623155-50623174	None:intergenic	45.0%
	CGTTTCCAATAGGCCATATG+AGG	-	Chr4:50623879-50623898	None:intergenic	45.0%
	GAGGATCAGAGTTAACTGTC+AGG	+	Chr4:50623420-50623439	MsG0480020923.01.T01:CDS	45.0%
	GAGTGCCTTGCATATTGCAA+GGG	+	Chr4:50623688-50623707	MsG0480020923.01.T01:CDS	45.0%
	GCATTCCAATGCTCTTTACC+CGG	-	Chr4:50623344-50623363	None:intergenic	45.0%
	GGATCAGAGTTAACTGTCAG+GGG	+	Chr4:50623422-50623441	MsG0480020923.01.T01:CDS	45.0%
	GTTCGAGAAGTAGTAGAGGA+GGG	+	Chr4:50623761-50623780	MsG0480020923.01.T01:CDS	45.0%
	GTTGCTAGGACTCATACTTG+AGG	-	Chr4:50623192-50623211	None:intergenic	45.0%
	TATGAGTCCTAGCAACGAAG+CGG	+	Chr4:50623196-50623215	MsG0480020923.01.T01:CDS	45.0%
	TCGATCCTCATATGGCCTAT+TGG	+	Chr4:50623871-50623890	MsG0480020923.01.T01:CDS	45.0%
	TGGATCCCTTGCAATATGCA+AGG	-	Chr4:50623696-50623715	None:intergenic	45.0%
	TGTTCGAGAAGTAGTAGAGG+AGG	+	Chr4:50623760-50623779	MsG0480020923.01.T01:CDS	45.0%
	TTCGAGAAGTAGTAGAGGAG+GGG	+	Chr4:50623762-50623781	MsG0480020923.01.T01:CDS	45.0%
!	AGAGTGCCTTGCATATTGCA+AGG	+	Chr4:50623687-50623706	MsG0480020923.01.T01:CDS	45.0%
!	GGTGTTGCAATATGTTTCGG+AGG	+	Chr4:50623401-50623420	MsG0480020923.01.T01:CDS	45.0%
!	GTCTCGAGTACCGTATGAAT+CGG	+	Chr4:50623232-50623251	MsG0480020923.01.T01:CDS	45.0%
!!	AAGCAGTGGGATTGGTTAGT+CGG	+	Chr4:50623306-50623325	MsG0480020923.01.T01:CDS	45.0%
!!	GGGATTGGTTAGTCGGTTTA+TGG	+	Chr4:50623313-50623332	MsG0480020923.01.T01:CDS	45.0%
!!	GTATGGTGTCGATCCTCATA+TGG	+	Chr4:50623863-50623882	MsG0480020923.01.T01:CDS	45.0%
	ACCAGACATTGCACAAGCAG+TGG	+	Chr4:50623292-50623311	MsG0480020923.01.T01:CDS	50.0%
	CATTGCACAAGCAGTGGGAT+TGG	+	Chr4:50623298-50623317	MsG0480020923.01.T01:CDS	50.0%
	CCAGACATTGCACAAGCAGT+GGG	+	Chr4:50623293-50623312	MsG0480020923.01.T01:CDS	50.0%
	GGTTATGTGTTCACGCTTGC+TGG	+	Chr4:50623497-50623516	MsG0480020923.01.T01:CDS	50.0%
	GTCGTTGACAGAGCTACAAC+TGG	-	Chr4:50623554-50623573	None:intergenic	50.0%
	TTGCTGGAGGAGCAGTAAGT+TGG	+	Chr4:50623513-50623532	MsG0480020923.01.T01:CDS	50.0%
!	TATGTGTTCACGCTTGCTGG+AGG	+	Chr4:50623500-50623519	MsG0480020923.01.T01:CDS	50.0%
!	TCGAGTACCGTATGAATCGG+CGG	+	Chr4:50623235-50623254	MsG0480020923.01.T01:CDS	50.0%
!!	TAGTCGGTTTATGGCGGATC+CGG	+	Chr4:50623322-50623341	MsG0480020923.01.T01:CDS	50.0%
	AGTACCGTATGAATCGGCGG+TGG	+	Chr4:50623238-50623257	MsG0480020923.01.T01:CDS	55.0%
	AGTAGTAGAGGAGGGGAGTG+TGG	+	Chr4:50623769-50623788	MsG0480020923.01.T01:CDS	55.0%
	ATCCTCTCCGCTTCGTTGCT+AGG	-	Chr4:50623206-50623225	None:intergenic	55.0%
	CCCACTGCTTGTGCAATGTC+TGG	-	Chr4:50623296-50623315	None:intergenic	55.0%
	GTACCGTATGAATCGGCGGT+GGG	+	Chr4:50623239-50623258	MsG0480020923.01.T01:CDS	55.0%
	TAGCAACGAAGCGGAGAGGA+TGG	+	Chr4:50623205-50623224	MsG0480020923.01.T01:CDS	55.0%
!	CGGATCCGGGTAAAGAGCAT+TGG	+	Chr4:50623336-50623355	MsG0480020923.01.T01:CDS	55.0%
!!	AGTCGGTTTATGGCGGATCC+GGG	+	Chr4:50623323-50623342	MsG0480020923.01.T01:CDS	55.0%
!!	CTTCCCACCGCCGATTCATA+CGG	-	Chr4:50623245-50623264	None:intergenic	55.0%
	GGCAGCTACCCAAGCGTGTA+AGG	+	Chr4:50623589-50623608	MsG0480020923.01.T01:CDS	60.0%
	GTCCTAGCAACGAAGCGGAG+AGG	+	Chr4:50623201-50623220	MsG0480020923.01.T01:CDS	60.0%
	GGAGGAACTCGGGCACAAGC+AGG	+	Chr4:50623637-50623656	MsG0480020923.01.T01:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	50623137	50623901	50623137	ID=MsG0480020923.01;Name=MsG0480020923.01
Chr4	mRNA	50623137	50623901	50623137	ID=MsG0480020923.01.T01;Parent=MsG0480020923.01;Name=MsG0480020923.01.T01;_AED=0.49;_eAED=0.49;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|254
Chr4	exon	50623137	50623901	50623137	ID=MsG0480020923.01.T01:exon:315;Parent=MsG0480020923.01.T01
Chr4	CDS	50623137	50623901	50623137	ID=MsG0480020923.01.T01:cds;Parent=MsG0480020923.01.T01

Gene Sequence

>MsG0480020923.01.T01

ATGCAAGACTGTAAGCCAATTTCTACCCCACTTCCTGTGAATTTTAAATTATCCTCAAGTATGAGTCCTAGCAACGAAGCGGAGAGGATGGAAATGTCTCGAGTACCGTATGAATCGGCGGTGGGAAGCCTTATGTATGCCATGATATGTACAAGACCAGACATTGCACAAGCAGTGGGATTGGTTAGTCGGTTTATGGCGGATCCGGGTAAAGAGCATTGGAATGCTGTTAAAAGAATCATGAGGTACATTAAAGGAACCTCAGGTGTTGCAATATGTTTCGGAGGATCAGAGTTAACTGTCAGGGGTTATGTTGATTCAGATTTTGCAGGTGATCTTGATAAAAGAAAATCTACTACTGGTTATGTGTTCACGCTTGCTGGAGGAGCAGTAAGTTGGTTGTCCAAGTTACAACCAGTTGTAGCTCTGTCAACGACAGAAGCTGAGTACATGGCAGCTACCCAAGCGTGTAAGGAAGCTATTTGGATGCAAAGGTTAATGGAGGAACTCGGGCACAAGCAGGAACAAATTACTGTGTATTGTGACAGTCAGAGTGCCTTGCATATTGCAAGGGATCCAGCTTTTCATTCAAGAACAAAATACATAGGCGTTCAATATCATTTTGTTCGAGAAGTAGTAGAGGAGGGGAGTGTGGATATGCAAAAGATTCACACCAATGATAACCTAGCAGATGTAATGACAAAGTCGATCAACGCTGACAAGTTTGTATGGTGTCGATCCTCATATGGCCTATTGGAAACGTAG

Protein sequence

>MsG0480020923.01.T01

MQDCKPISTPLPVNFKLSSSMSPSNEAERMEMSRVPYESAVGSLMYAMICTRPDIAQAVGLVSRFMADPGKEHWNAVKRIMRYIKGTSGVAICFGGSELTVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQPVVALSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSALHIARDPAFHSRTKYIGVQYHFVREVVEEGSVDMQKIHTNDNLADVMTKSINADKFVWCRSSYGLLET*