Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580026226.01.T01 | XP_003613885.1 | 84.698 | 281 | 13 | 1 | 1 | 281 | 244 | 494 | 2.44E-168 | 485 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580026226.01.T01 | Q6NQ51 | 64.982 | 277 | 67 | 1 | 1 | 277 | 250 | 496 | 2.45E-127 | 374 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580026226.01.T01 | G7JWH1 | 84.698 | 281 | 13 | 1 | 1 | 281 | 244 | 494 | 1.16e-168 | 485 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048687.01 | MsG0580026226.01 | 0.879566 | 1.122095e-69 | 6.112867e-66 |
| MsG0080048971.01 | MsG0580026226.01 | 0.834424 | 3.022264e-56 | 3.585227e-53 |
| MsG0180000139.01 | MsG0580026226.01 | 0.825454 | 4.647334e-54 | 4.237623e-51 |
| MsG0180000331.01 | MsG0580026226.01 | 0.839344 | 1.676286e-57 | 2.308302e-54 |
| MsG0180000339.01 | MsG0580026226.01 | 0.814709 | 1.342147e-51 | 9.071641e-49 |
| MsG0180000824.01 | MsG0580026226.01 | 0.821142 | 4.724597e-53 | 3.812344e-50 |
| MsG0180001237.01 | MsG0580026226.01 | 0.813251 | 2.813757e-51 | 1.828064e-48 |
| MsG0180001260.01 | MsG0580026226.01 | 0.818118 | 2.315772e-52 | 1.718216e-49 |
| MsG0180003493.01 | MsG0580026226.01 | 0.812853 | 3.439309e-51 | 2.210678e-48 |
| MsG0180003548.01 | MsG0580026226.01 | 0.807122 | 5.896482e-50 | 3.257258e-47 |
| MsG0180003793.01 | MsG0580026226.01 | 0.855635 | 5.525433e-62 | 1.284044e-58 |
| MsG0180004398.01 | MsG0580026226.01 | 0.809681 | 1.678191e-50 | 9.917188e-48 |
| MsG0180004481.01 | MsG0580026226.01 | 0.805348 | 1.394003e-49 | 7.357940e-47 |
| MsG0180004509.01 | MsG0580026226.01 | 0.817559 | 3.097415e-52 | 2.263166e-49 |
| MsG0180004854.01 | MsG0580026226.01 | 0.829107 | 6.193081e-55 | 6.277025e-52 |
| MsG0180004991.01 | MsG0580026226.01 | 0.803133 | 4.032527e-49 | 2.010541e-46 |
| MsG0180005049.01 | MsG0580026226.01 | 0.808602 | 2.857468e-50 | 1.640797e-47 |
| MsG0180005334.01 | MsG0580026226.01 | 0.817389 | 3.383114e-52 | 2.460515e-49 |
| MsG0180005575.01 | MsG0580026226.01 | 0.831710 | 1.430855e-55 | 1.565488e-52 |
| MsG0280010776.01 | MsG0580026226.01 | 0.810565 | 1.082342e-50 | 6.546185e-48 |
| MsG0280011339.01 | MsG0580026226.01 | 0.810191 | 1.303086e-50 | 7.803600e-48 |
| MsG0280011388.01 | MsG0580026226.01 | 0.800885 | 1.168107e-48 | 5.501411e-46 |
| MsG0380012073.01 | MsG0580026226.01 | 0.856056 | 4.162664e-62 | 9.809840e-59 |
| MsG0380013579.01 | MsG0580026226.01 | 0.832008 | 1.207513e-55 | 1.332711e-52 |
| MsG0380013641.01 | MsG0580026226.01 | 0.832079 | 1.159604e-55 | 1.282455e-52 |
| MsG0380014175.01 | MsG0580026226.01 | 0.819216 | 1.305184e-52 | 9.981700e-50 |
| MsG0380014778.01 | MsG0580026226.01 | 0.807563 | 4.755421e-50 | 2.657213e-47 |
| MsG0480018477.01 | MsG0580026226.01 | 0.859349 | 4.397817e-63 | 1.158067e-59 |
| MsG0480018894.01 | MsG0580026226.01 | 0.843129 | 1.694196e-58 | 2.624744e-55 |
| MsG0480021006.01 | MsG0580026226.01 | 0.814717 | 1.336282e-51 | 9.034229e-49 |
| MsG0480021077.01 | MsG0580026226.01 | -0.819151 | 1.349849e-52 | 1.030448e-49 |
| MsG0480022960.01 | MsG0580026226.01 | 0.832816 | 7.617678e-56 | 8.610599e-53 |
| MsG0480023149.01 | MsG0580026226.01 | 0.822666 | 2.096566e-53 | 1.766293e-50 |
| MsG0480023221.01 | MsG0580026226.01 | 0.818891 | 1.546929e-52 | 1.172592e-49 |
| MsG0480023272.01 | MsG0580026226.01 | 0.805968 | 1.032908e-49 | 5.539763e-47 |
| MsG0480023559.01 | MsG0580026226.01 | 0.840117 | 1.054811e-57 | 1.487725e-54 |
| MsG0580024191.01 | MsG0580026226.01 | 0.819319 | 1.236300e-52 | 9.481351e-50 |
| MsG0580026059.01 | MsG0580026226.01 | 0.816271 | 6.026773e-52 | 4.251178e-49 |
| MsG0380015027.01 | MsG0580026226.01 | 0.811348 | 7.322220e-51 | 4.521468e-48 |
| MsG0380016290.01 | MsG0580026226.01 | 0.810302 | 1.233347e-50 | 7.407395e-48 |
| MsG0380016389.01 | MsG0580026226.01 | 0.823445 | 1.379620e-53 | 1.188104e-50 |
| MsG0380016604.01 | MsG0580026226.01 | 0.808857 | 2.520702e-50 | 1.457131e-47 |
| MsG0480018278.01 | MsG0580026226.01 | 0.819118 | 1.373550e-52 | 1.047654e-49 |
| MsG0480018335.01 | MsG0580026226.01 | 0.805840 | 1.099382e-49 | 5.876782e-47 |
| MsG0580026226.01 | MsG0580028597.01 | 0.809492 | 1.842468e-50 | 1.083293e-47 |
| MsG0580026226.01 | MsG0580028897.01 | 0.810309 | 1.228878e-50 | 7.382141e-48 |
| MsG0580026226.01 | MsG0580029127.01 | 0.811950 | 5.417733e-51 | 3.399478e-48 |
| MsG0580026226.01 | MsG0580029132.01 | 0.815287 | 9.987895e-52 | 6.857856e-49 |
| MsG0580026226.01 | MsG0580029729.01 | 0.816159 | 6.383165e-52 | 4.488663e-49 |
| MsG0580026226.01 | MsG0680030865.01 | 0.816485 | 5.396760e-52 | 3.828815e-49 |
| MsG0580026226.01 | MsG0680030968.01 | 0.806733 | 7.126564e-50 | 3.897494e-47 |
| MsG0580026226.01 | MsG0680031628.01 | 0.826924 | 2.076585e-54 | 1.975019e-51 |
| MsG0580026226.01 | MsG0680035306.01 | 0.818427 | 1.970934e-52 | 1.474973e-49 |
| MsG0580026226.01 | MsG0680035577.01 | 0.814636 | 1.393104e-51 | 9.397685e-49 |
| MsG0580026226.01 | MsG0680035888.01 | 0.854655 | 1.065464e-61 | 2.396695e-58 |
| MsG0580026226.01 | MsG0780036240.01 | 0.839474 | 1.550544e-57 | 2.143661e-54 |
| MsG0580026226.01 | MsG0780037093.01 | 0.821466 | 3.978670e-53 | 3.239261e-50 |
| MsG0580026226.01 | MsG0780037240.01 | 0.828751 | 7.553203e-55 | 7.575517e-52 |
| MsG0580026226.01 | MsG0780038400.01 | 0.862889 | 3.681465e-64 | 1.095291e-60 |
| MsG0580026226.01 | MsG0780038403.01 | 0.802956 | 4.385149e-49 | 2.176581e-46 |
| MsG0580026226.01 | MsG0780038587.01 | 0.824409 | 8.198222e-54 | 7.255027e-51 |
| MsG0580026226.01 | MsG0780039643.01 | 0.801452 | 8.943291e-49 | 4.272530e-46 |
| MsG0580026226.01 | MsG0780040569.01 | 0.811290 | 7.539780e-51 | 4.648734e-48 |
| MsG0580026226.01 | MsG0780040926.01 | 0.833891 | 4.108795e-56 | 4.796898e-53 |
| MsG0580026226.01 | MsG0780041016.01 | 0.816069 | 6.687122e-52 | 4.691015e-49 |
| MsG0580026226.01 | MsG0780041223.01 | 0.850340 | 1.808638e-60 | 3.531325e-57 |
| MsG0580026226.01 | MsG0780041268.01 | 0.818138 | 2.292338e-52 | 1.701737e-49 |
| MsG0580026226.01 | MsG0780041423.01 | 0.814203 | 1.735975e-51 | 1.157398e-48 |
| MsG0580026226.01 | MsG0880042128.01 | 0.817229 | 3.675587e-52 | 2.661373e-49 |
| MsG0580026226.01 | MsG0880042129.01 | 0.807485 | 4.938939e-50 | 2.754329e-47 |
| MsG0580026226.01 | MsG0880042519.01 | 0.805086 | 1.581750e-49 | 8.293010e-47 |
| MsG0580026226.01 | MsG0880042991.01 | 0.828223 | 1.013112e-54 | 1.000733e-51 |
| MsG0580026226.01 | MsG0880045145.01 | 0.809596 | 1.750391e-50 | 1.032069e-47 |
| MsG0580026226.01 | MsG0880045656.01 | 0.814667 | 1.370846e-51 | 9.255045e-49 |
| MsG0580026226.01 | MsG0880046074.01 | 0.820406 | 6.974929e-53 | 5.514283e-50 |
| MsG0580026226.01 | MsG0880046177.01 | 0.828448 | 8.939581e-55 | 8.888661e-52 |
| MsG0580026226.01 | MsG0880046933.01 | 0.824959 | 6.083085e-54 | 5.469837e-51 |
| MsG0580026226.01 | MsG0880047212.01 | 0.817237 | 3.659542e-52 | 2.650395e-49 |
| MsG0580026226.01 | MsG0880047470.01 | 0.819769 | 9.757184e-53 | 7.578767e-50 |
| MsG0580026226.01 | MsG0880047743.01 | 0.820256 | 7.551992e-53 | 5.945444e-50 |
| MsG0280006993.01 | MsG0580026226.01 | 0.806436 | 8.233852e-50 | 4.468863e-47 |
| MsG0280007161.01 | MsG0580026226.01 | 0.806111 | 9.642054e-50 | 5.189943e-47 |
| MsG0280007196.01 | MsG0580026226.01 | 0.814588 | 1.427063e-51 | 9.614614e-49 |
| MsG0280007226.01 | MsG0580026226.01 | 0.807319 | 5.355805e-50 | 2.974012e-47 |
| MsG0280007527.01 | MsG0580026226.01 | 0.808019 | 3.804907e-50 | 2.151647e-47 |
| MsG0280007847.01 | MsG0580026226.01 | 0.806630 | 7.494629e-50 | 4.087571e-47 |
| MsG0280008118.01 | MsG0580026226.01 | 0.838554 | 2.683493e-57 | 3.607064e-54 |
| MsG0280008614.01 | MsG0580026226.01 | 0.800677 | 1.288002e-48 | 6.033848e-46 |
| MsG0280008885.01 | MsG0580026226.01 | 0.804248 | 2.366739e-49 | 1.214268e-46 |
| MsG0280008909.01 | MsG0580026226.01 | 0.831681 | 1.454637e-55 | 1.590029e-52 |
| MsG0280009141.01 | MsG0580026226.01 | 0.808482 | 3.030271e-50 | 1.734707e-47 |
| MsG0280009375.01 | MsG0580026226.01 | 0.817739 | 2.820772e-52 | 2.071304e-49 |
| MsG0280010002.01 | MsG0580026226.01 | 0.822526 | 2.259603e-53 | 1.896130e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580026226.01.T01 | MTR_5g042200 | 84.698 | 281 | 13 | 1 | 1 | 281 | 244 | 494 | 2.95e-172 | 485 |
| MsG0580026226.01.T01 | MTR_4g082310 | 70.107 | 281 | 54 | 1 | 1 | 281 | 256 | 506 | 1.41e-142 | 410 |
| MsG0580026226.01.T01 | MTR_6g016015 | 56.274 | 263 | 85 | 1 | 1 | 263 | 275 | 507 | 1.81e-102 | 308 |
| MsG0580026226.01.T01 | MTR_4g110030 | 56.274 | 263 | 85 | 1 | 1 | 263 | 276 | 508 | 6.72e-101 | 305 |
| MsG0580026226.01.T01 | MTR_2g059350 | 57.034 | 263 | 83 | 1 | 1 | 263 | 275 | 507 | 1.16e-100 | 304 |
| MsG0580026226.01.T01 | MTR_5g064620 | 44.280 | 271 | 113 | 4 | 2 | 264 | 271 | 511 | 1.14e-67 | 219 |
| MsG0580026226.01.T01 | MTR_5g081690 | 42.146 | 261 | 118 | 5 | 7 | 266 | 284 | 512 | 1.43e-64 | 211 |
| MsG0580026226.01.T01 | MTR_4g019210 | 42.529 | 261 | 117 | 5 | 7 | 266 | 395 | 623 | 1.53e-62 | 208 |
| MsG0580026226.01.T01 | MTR_3g099480 | 43.123 | 269 | 115 | 5 | 6 | 266 | 301 | 539 | 1.68e-62 | 206 |
| MsG0580026226.01.T01 | MTR_3g096020 | 42.007 | 269 | 118 | 4 | 8 | 268 | 352 | 590 | 2.83e-62 | 206 |
| MsG0580026226.01.T01 | MTR_4g125460 | 40.741 | 270 | 123 | 5 | 1 | 267 | 246 | 481 | 8.89e-61 | 200 |
| MsG0580026226.01.T01 | MTR_4g125460 | 40.741 | 270 | 123 | 5 | 1 | 267 | 385 | 620 | 1.19e-59 | 200 |
| MsG0580026226.01.T01 | MTR_7g064210 | 68.531 | 143 | 24 | 2 | 1 | 143 | 67 | 188 | 1.20e-54 | 182 |
| MsG0580026226.01.T01 | MTR_5g099010 | 40.541 | 259 | 114 | 4 | 8 | 266 | 283 | 501 | 6.61e-50 | 173 |
| MsG0580026226.01.T01 | MTR_3g115220 | 38.346 | 266 | 124 | 6 | 1 | 266 | 269 | 494 | 1.89e-48 | 169 |
| MsG0580026226.01.T01 | MTR_5g012770 | 38.577 | 267 | 123 | 6 | 8 | 274 | 279 | 504 | 1.37e-47 | 166 |
| MsG0580026226.01.T01 | MTR_4g100810 | 35.849 | 265 | 129 | 5 | 8 | 272 | 274 | 497 | 1.34e-43 | 155 |
| MsG0580026226.01.T01 | MTR_1g101990 | 34.657 | 277 | 131 | 8 | 2 | 269 | 54 | 289 | 5.22e-42 | 147 |
| MsG0580026226.01.T01 | MTR_4g132590 | 36.641 | 262 | 127 | 8 | 8 | 264 | 265 | 492 | 5.23e-40 | 145 |
| MsG0580026226.01.T01 | MTR_4g132590 | 36.641 | 262 | 127 | 8 | 8 | 264 | 364 | 591 | 2.17e-39 | 145 |
| MsG0580026226.01.T01 | MTR_3g086570 | 34.468 | 235 | 125 | 3 | 6 | 239 | 322 | 528 | 1.86e-38 | 142 |
| MsG0580026226.01.T01 | MTR_5g032100 | 35.385 | 260 | 130 | 6 | 6 | 265 | 281 | 502 | 3.12e-38 | 140 |
| MsG0580026226.01.T01 | MTR_5g059260 | 35.581 | 267 | 129 | 9 | 6 | 264 | 328 | 559 | 2.67e-36 | 136 |
| MsG0580026226.01.T01 | MTR_3g100310 | 33.969 | 262 | 135 | 6 | 3 | 264 | 292 | 515 | 9.80e-36 | 134 |
| MsG0580026226.01.T01 | MTR_2g016470 | 34.733 | 262 | 136 | 5 | 8 | 266 | 387 | 616 | 3.46e-35 | 133 |
| MsG0580026226.01.T01 | MTR_1g031590 | 31.716 | 268 | 133 | 7 | 6 | 264 | 320 | 546 | 2.23e-34 | 130 |
| MsG0580026226.01.T01 | MTR_4g084570 | 30.909 | 275 | 140 | 7 | 6 | 271 | 321 | 554 | 2.84e-34 | 130 |
| MsG0580026226.01.T01 | MTR_4g023030 | 32.721 | 272 | 142 | 6 | 2 | 270 | 389 | 622 | 5.57e-34 | 130 |
| MsG0580026226.01.T01 | MTR_3g005340 | 31.203 | 266 | 141 | 7 | 6 | 266 | 318 | 546 | 2.29e-33 | 128 |
| MsG0580026226.01.T01 | MTR_1g102030 | 32.746 | 284 | 135 | 10 | 2 | 269 | 250 | 493 | 3.12e-32 | 124 |
| MsG0580026226.01.T01 | MTR_3g026650 | 30.189 | 265 | 150 | 5 | 2 | 266 | 329 | 558 | 7.21e-32 | 124 |
| MsG0580026226.01.T01 | MTR_4g010990 | 31.004 | 229 | 114 | 7 | 7 | 232 | 145 | 332 | 4.64e-23 | 97.4 |
| MsG0580026226.01.T01 | MTR_4g010990 | 31.004 | 229 | 114 | 7 | 7 | 232 | 234 | 421 | 8.72e-23 | 97.4 |
| MsG0580026226.01.T01 | MTR_3g026650 | 32.086 | 187 | 99 | 2 | 2 | 188 | 329 | 487 | 2.11e-22 | 96.7 |
| MsG0580026226.01.T01 | MTR_3g086570 | 30.882 | 136 | 69 | 1 | 6 | 141 | 322 | 432 | 7.35e-17 | 80.5 |
| MsG0580026226.01.T01 | MTR_3g092590 | 30.137 | 146 | 76 | 2 | 7 | 152 | 264 | 383 | 7.75e-13 | 68.6 |
| MsG0580026226.01.T01 | MTR_1g007390 | 30.345 | 145 | 75 | 2 | 7 | 151 | 270 | 388 | 8.29e-13 | 68.6 |
| MsG0580026226.01.T01 | MTR_3g092590 | 30.345 | 145 | 75 | 2 | 7 | 151 | 264 | 382 | 9.25e-13 | 68.6 |
| MsG0580026226.01.T01 | MTR_7g017330 | 36.170 | 94 | 59 | 1 | 54 | 147 | 294 | 386 | 1.51e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580026226.01.T01 | AT1G14020 | 64.982 | 277 | 67 | 1 | 1 | 277 | 250 | 496 | 2.50e-128 | 374 |
| MsG0580026226.01.T01 | AT2G03280 | 62.879 | 264 | 67 | 2 | 1 | 263 | 247 | 480 | 2.01e-114 | 338 |
| MsG0580026226.01.T01 | AT2G03280 | 62.879 | 264 | 67 | 2 | 1 | 263 | 274 | 507 | 4.95e-114 | 338 |
| MsG0580026226.01.T01 | AT3G02250 | 53.992 | 263 | 91 | 1 | 1 | 263 | 266 | 498 | 6.41e-93 | 284 |
| MsG0580026226.01.T01 | AT5G15740 | 53.612 | 263 | 92 | 1 | 1 | 263 | 266 | 498 | 2.78e-92 | 282 |
| MsG0580026226.01.T01 | AT1G22460 | 44.485 | 272 | 105 | 5 | 6 | 265 | 321 | 558 | 7.27e-67 | 218 |
| MsG0580026226.01.T01 | AT2G37980 | 40.000 | 275 | 132 | 4 | 7 | 280 | 389 | 631 | 1.94e-62 | 207 |
| MsG0580026226.01.T01 | AT5G64600 | 41.606 | 274 | 122 | 4 | 6 | 271 | 278 | 521 | 2.95e-62 | 205 |
| MsG0580026226.01.T01 | AT5G35570 | 40.824 | 267 | 125 | 4 | 1 | 266 | 408 | 642 | 3.63e-60 | 202 |
| MsG0580026226.01.T01 | AT3G54100 | 40.449 | 267 | 126 | 5 | 7 | 272 | 385 | 619 | 7.15e-60 | 201 |
| MsG0580026226.01.T01 | AT5G01100 | 39.015 | 264 | 123 | 5 | 7 | 265 | 379 | 609 | 3.59e-54 | 186 |
| MsG0580026226.01.T01 | AT1G20550 | 37.729 | 273 | 130 | 4 | 8 | 280 | 273 | 505 | 2.19e-52 | 179 |
| MsG0580026226.01.T01 | AT4G38390 | 40.856 | 257 | 112 | 5 | 8 | 264 | 289 | 505 | 2.63e-52 | 179 |
| MsG0580026226.01.T01 | AT1G76270 | 39.382 | 259 | 117 | 5 | 8 | 266 | 270 | 488 | 3.72e-52 | 179 |
| MsG0580026226.01.T01 | AT4G16650 | 39.147 | 258 | 116 | 6 | 8 | 265 | 288 | 504 | 5.13e-46 | 162 |
| MsG0580026226.01.T01 | AT4G16650 | 39.147 | 258 | 116 | 6 | 8 | 265 | 288 | 504 | 5.13e-46 | 162 |
| MsG0580026226.01.T01 | AT1G62330 | 34.317 | 271 | 137 | 8 | 2 | 266 | 416 | 651 | 2.92e-39 | 145 |
| MsG0580026226.01.T01 | AT4G24530 | 36.154 | 260 | 128 | 6 | 6 | 265 | 296 | 517 | 4.87e-39 | 143 |
| MsG0580026226.01.T01 | AT5G65470 | 33.969 | 262 | 135 | 6 | 3 | 264 | 279 | 502 | 1.47e-37 | 139 |
| MsG0580026226.01.T01 | AT1G29200 | 37.786 | 262 | 126 | 8 | 8 | 265 | 192 | 420 | 4.53e-37 | 136 |
| MsG0580026226.01.T01 | AT1G29200 | 37.786 | 262 | 126 | 8 | 8 | 265 | 266 | 494 | 9.40e-37 | 136 |
| MsG0580026226.01.T01 | AT1G29200 | 37.786 | 262 | 126 | 8 | 8 | 265 | 266 | 494 | 9.40e-37 | 136 |
| MsG0580026226.01.T01 | AT1G29200 | 37.786 | 262 | 126 | 8 | 8 | 265 | 382 | 610 | 2.95e-36 | 136 |
| MsG0580026226.01.T01 | AT5G63390 | 34.221 | 263 | 138 | 6 | 5 | 267 | 324 | 551 | 2.95e-36 | 136 |
| MsG0580026226.01.T01 | AT3G26370 | 35.169 | 236 | 122 | 5 | 6 | 239 | 330 | 536 | 4.42e-36 | 135 |
| MsG0580026226.01.T01 | AT1G11990 | 37.643 | 263 | 123 | 8 | 8 | 264 | 383 | 610 | 5.38e-36 | 135 |
| MsG0580026226.01.T01 | AT1G11990 | 37.643 | 263 | 123 | 8 | 8 | 264 | 361 | 588 | 5.48e-36 | 135 |
| MsG0580026226.01.T01 | AT1G04910 | 34.701 | 268 | 129 | 8 | 2 | 265 | 250 | 475 | 1.45e-35 | 134 |
| MsG0580026226.01.T01 | AT1G38065 | 34.082 | 267 | 133 | 9 | 6 | 264 | 207 | 438 | 3.25e-35 | 132 |
| MsG0580026226.01.T01 | AT1G38065 | 34.457 | 267 | 132 | 9 | 6 | 264 | 197 | 428 | 3.26e-35 | 132 |
| MsG0580026226.01.T01 | AT3G07900 | 32.090 | 268 | 147 | 5 | 2 | 269 | 345 | 577 | 7.88e-35 | 132 |
| MsG0580026226.01.T01 | AT1G38131 | 34.457 | 267 | 132 | 9 | 6 | 264 | 326 | 557 | 8.97e-35 | 132 |
| MsG0580026226.01.T01 | AT1G14970 | 33.083 | 266 | 142 | 8 | 3 | 266 | 177 | 408 | 1.30e-34 | 129 |
| MsG0580026226.01.T01 | AT1G14970 | 33.083 | 266 | 142 | 8 | 3 | 266 | 203 | 434 | 1.94e-34 | 129 |
| MsG0580026226.01.T01 | AT1G35510 | 32.331 | 266 | 138 | 8 | 6 | 266 | 330 | 558 | 3.40e-34 | 130 |
| MsG0580026226.01.T01 | AT1G14970 | 33.083 | 266 | 142 | 8 | 3 | 266 | 323 | 554 | 8.62e-34 | 129 |
| MsG0580026226.01.T01 | AT2G01480 | 32.743 | 226 | 107 | 4 | 8 | 224 | 327 | 516 | 2.07e-31 | 122 |
| MsG0580026226.01.T01 | AT2G01480 | 32.877 | 219 | 105 | 3 | 8 | 217 | 327 | 512 | 3.61e-30 | 119 |
| MsG0580026226.01.T01 | AT2G44500 | 30.000 | 270 | 154 | 5 | 2 | 271 | 334 | 568 | 3.38e-29 | 116 |
| MsG0580026226.01.T01 | AT1G52630 | 30.870 | 230 | 113 | 7 | 7 | 233 | 145 | 331 | 1.10e-23 | 99.0 |
| MsG0580026226.01.T01 | AT1G52630 | 30.870 | 230 | 113 | 7 | 7 | 233 | 233 | 419 | 2.41e-23 | 99.0 |
| MsG0580026226.01.T01 | AT3G03810 | 33.108 | 148 | 73 | 2 | 7 | 154 | 263 | 384 | 3.69e-16 | 79.0 |
| MsG0580026226.01.T01 | AT3G03810 | 33.108 | 148 | 73 | 2 | 7 | 154 | 263 | 384 | 3.69e-16 | 79.0 |
| MsG0580026226.01.T01 | AT3G30300 | 29.252 | 147 | 78 | 2 | 7 | 153 | 274 | 394 | 3.56e-13 | 69.7 |
| MsG0580026226.01.T01 | AT3G30300 | 29.252 | 147 | 78 | 2 | 7 | 153 | 274 | 394 | 3.56e-13 | 69.7 |
Find 83 sgRNAs with CRISPR-Local
Find 140 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGCAGCTGGTGAGATTTA+TGG | 0.210044 | 5:-32728367 | MsG0580026226.01.T01:CDS |
| TTTGCAATTTCAGGTGAAAA+AGG | 0.267125 | 5:-32728112 | MsG0580026226.01.T01:intron |
| CCTACAAAATTCTTGTATAA+TGG | 0.268435 | 5:+32727459 | None:intergenic |
| GTTCTTCGAGCCTTAGGTTT+TGG | 0.287595 | 5:-32728409 | MsG0580026226.01.T01:CDS |
| GGATGCAAAGAAATAGAGTT+TGG | 0.295265 | 5:+32727480 | None:intergenic |
| AGAACTAAGGCCGCCTCTTC+TGG | 0.312939 | 5:+32728427 | None:intergenic |
| ATCATAATGGAACCCTAAAA+TGG | 0.324135 | 5:-32727707 | MsG0580026226.01.T01:CDS |
| CCATCTGCGATGAGTGATTC+TGG | 0.327493 | 5:+32728055 | None:intergenic |
| AGAAATTGTGATGAGTTTCT+AGG | 0.340861 | 5:-32727549 | MsG0580026226.01.T01:CDS |
| AATTGAGGATAAGAGGGATT+TGG | 0.346273 | 5:-32729134 | MsG0580026226.01.T01:CDS |
| CAAGTTCATGAAAAGAGAAT+TGG | 0.355490 | 5:-32727660 | MsG0580026226.01.T01:CDS |
| CTTCTGTAATTGAGGATAAG+AGG | 0.379403 | 5:-32729141 | MsG0580026226.01.T01:CDS |
| TAGAAATAGTCCTCCTCCTT+TGG | 0.381323 | 5:+32727603 | None:intergenic |
| ACCTTTATCCCTACTTATGA+TGG | 0.388352 | 5:-32727997 | MsG0580026226.01.T01:CDS |
| TTACAGAAGCAAGAATGAAT+TGG | 0.392145 | 5:+32729155 | None:intergenic |
| CATTCTTGCTTCTGTAATTG+AGG | 0.394131 | 5:-32729149 | MsG0580026226.01.T01:CDS |
| GCCTTAGTTCTTCGAGCCTT+AGG | 0.411617 | 5:-32728415 | MsG0580026226.01.T01:CDS |
| TGTTGACAAACTCACAAGTT+GGG | 0.416079 | 5:+32728306 | None:intergenic |
| ATGGACATGTTGGCTTTCTC+AGG | 0.416770 | 5:-32729268 | MsG0580026226.01.T01:CDS |
| CCTAAAATGGCACGAGTTTG+CGG | 0.417592 | 5:-32727694 | MsG0580026226.01.T01:CDS |
| CTCATCGCAGATGGCCGCCT+TGG | 0.420168 | 5:-32728046 | MsG0580026226.01.T01:CDS |
| AAGAGGGATTTGGATCTTCT+CGG | 0.426772 | 5:-32729124 | MsG0580026226.01.T01:intron |
| GGCTTTCTCAGGTTGTACTC+AGG | 0.430358 | 5:-32729257 | MsG0580026226.01.T01:CDS |
| GATGCAAAGAAATAGAGTTT+GGG | 0.433046 | 5:+32727481 | None:intergenic |
| CCCATCATAAGTAGGGATAA+AGG | 0.444424 | 5:+32727996 | None:intergenic |
| TCATGTTTGGCCCCATGCCT+CGG | 0.448545 | 5:-32729181 | MsG0580026226.01.T01:CDS |
| TCACCAGCTGCAATATATAT+CGG | 0.453493 | 5:+32728376 | None:intergenic |
| GCTTTCTCAGGTTGTACTCA+GGG | 0.467938 | 5:-32729256 | MsG0580026226.01.T01:CDS |
| TTGGTTGATATGCATCATAA+TGG | 0.483990 | 5:-32727720 | MsG0580026226.01.T01:CDS |
| TAATTAATAAAGGTAAATGA+AGG | 0.486861 | 5:+32727364 | None:intergenic |
| ACCTAAGGCTCGAAGAACTA+AGG | 0.487906 | 5:+32728414 | None:intergenic |
| TGAATTGGAAGCCGAGGCAT+GGG | 0.488863 | 5:+32729170 | None:intergenic |
| CTAAGATGCAGTGCCACAAA+AGG | 0.492255 | 5:+32729298 | None:intergenic |
| GCCATGTTCCCATCATAAGT+AGG | 0.492805 | 5:+32727988 | None:intergenic |
| GCATTCCCTTGGTGAGAGAA+AGG | 0.505080 | 5:-32728497 | MsG0580026226.01.T01:CDS |
| TAGATATGAGATGGACATGT+TGG | 0.506081 | 5:-32729278 | MsG0580026226.01.T01:CDS |
| AGGAGATAATTTCTGAAGAG+AGG | 0.510275 | 5:-32728477 | MsG0580026226.01.T01:CDS |
| CCATGTTCCCATCATAAGTA+GGG | 0.511468 | 5:+32727989 | None:intergenic |
| TTCTGTAATTGAGGATAAGA+GGG | 0.515539 | 5:-32729140 | MsG0580026226.01.T01:CDS |
| AATTCAGGTATGCATTCCCT+TGG | 0.516525 | 5:-32728508 | MsG0580026226.01.T01:intron |
| ATGAATTGGAAGCCGAGGCA+TGG | 0.521492 | 5:+32729169 | None:intergenic |
| GCCGCCTCTTCTGGTGTCAA+AGG | 0.536521 | 5:+32728436 | None:intergenic |
| CCTTTATCCCTACTTATGAT+GGG | 0.537062 | 5:-32727996 | MsG0580026226.01.T01:CDS |
| AGTAGGGATAAAGGTGTCAC+TGG | 0.538681 | 5:+32728005 | None:intergenic |
| TTCTGAAGAGAGGAGATCAC+AGG | 0.544928 | 5:-32728467 | MsG0580026226.01.T01:CDS |
| ATCCGGATGCTTCACGAGAA+GGG | 0.551913 | 5:-32729322 | None:intergenic |
| GATCCGGATGCTTCACGAGA+AGG | 0.552719 | 5:-32729323 | None:intergenic |
| CCCTACTTATGATGGGAACA+TGG | 0.557915 | 5:-32727989 | MsG0580026226.01.T01:CDS |
| CCGAGGAACTCAAAAGATTG+AGG | 0.570538 | 5:-32729216 | MsG0580026226.01.T01:CDS |
| CCAGAATCACTCATCGCAGA+TGG | 0.574783 | 5:-32728055 | MsG0580026226.01.T01:CDS |
| TGGGAACATGGCAAAACTTG+TGG | 0.580054 | 5:-32727977 | MsG0580026226.01.T01:CDS |
| TACTGAAACCATAAAATCCA+AGG | 0.582440 | 5:+32728029 | None:intergenic |
| TATCTCCTTTCTCTCACCAA+GGG | 0.585333 | 5:+32728492 | None:intergenic |
| ACACCGATATATATTGCAGC+TGG | 0.586158 | 5:-32728379 | MsG0580026226.01.T01:CDS |
| TCCTTTGACACCAGAAGAGG+CGG | 0.587100 | 5:-32728437 | MsG0580026226.01.T01:CDS |
| CAAGAATGAATTGGAAGCCG+AGG | 0.588993 | 5:+32729164 | None:intergenic |
| AGAGAATTGGACAGCCAACT+CGG | 0.589262 | 5:-32727647 | MsG0580026226.01.T01:CDS |
| AATTAATAAAGGTAAATGAA+GGG | 0.593666 | 5:+32727365 | None:intergenic |
| CAAGTATAGTATGAGTTGAG+AGG | 0.595061 | 5:-32727510 | MsG0580026226.01.T01:exon |
| GCATATTCTGCAAGCCTCAG+TGG | 0.596243 | 5:+32727387 | None:intergenic |
| TGTCTCCCTACCAAAACCTA+AGG | 0.604346 | 5:+32728399 | None:intergenic |
| AGATTTATGGCGGTGAACGT+AGG | 0.606142 | 5:-32728354 | MsG0580026226.01.T01:CDS |
| TATAATCGACAGACCAAAGG+AGG | 0.606405 | 5:-32727616 | MsG0580026226.01.T01:CDS |
| AACTTGTGGAAGGCCATCGA+AGG | 0.608718 | 5:-32727963 | MsG0580026226.01.T01:intron |
| AACATGGCAAAACTTGTGGA+AGG | 0.609196 | 5:-32727973 | MsG0580026226.01.T01:CDS |
| ACATAGACACTCGTGAGGGT+TGG | 0.612994 | 5:+32727578 | None:intergenic |
| GTTGACAAACTCACAAGTTG+GGG | 0.614088 | 5:+32728307 | None:intergenic |
| AAATGGCACGAGTTTGCGGA+TGG | 0.616122 | 5:-32727690 | MsG0580026226.01.T01:CDS |
| ATGTCCTTTGACACCAGAAG+AGG | 0.616187 | 5:-32728440 | MsG0580026226.01.T01:CDS |
| TTGCTCAGAGAAAGAAGCCG+AGG | 0.622924 | 5:-32729233 | MsG0580026226.01.T01:CDS |
| AGTTATAATCGACAGACCAA+AGG | 0.626511 | 5:-32727619 | MsG0580026226.01.T01:CDS |
| ACTGCATCTTAGATATGAGA+TGG | 0.633287 | 5:-32729287 | MsG0580026226.01.T01:CDS |
| TTATCTCCTTTCTCTCACCA+AGG | 0.634323 | 5:+32728491 | None:intergenic |
| GGGTAAATACATACCTTCGA+TGG | 0.636072 | 5:+32727950 | None:intergenic |
| CCCTCACGAGTGTCTATGTG+AGG | 0.640114 | 5:-32727574 | MsG0580026226.01.T01:CDS |
| AATCGACAGACCAAAGGAGG+AGG | 0.642909 | 5:-32727613 | MsG0580026226.01.T01:CDS |
| AGGAAATATTTGTTCCACTG+AGG | 0.653180 | 5:-32727401 | MsG0580026226.01.T01:three_prime_UTR |
| TCCTCACATAGACACTCGTG+AGG | 0.666757 | 5:+32727573 | None:intergenic |
| CCTCACATAGACACTCGTGA+GGG | 0.677641 | 5:+32727574 | None:intergenic |
| GAATTGGAAGCCGAGGCATG+GGG | 0.687373 | 5:+32729171 | None:intergenic |
| TCTGAAGAGAGGAGATCACA+GGG | 0.690255 | 5:-32728466 | MsG0580026226.01.T01:CDS |
| GCAGCTGGTGAGATTTATGG+CGG | 0.732613 | 5:-32728364 | MsG0580026226.01.T01:CDS |
| TGAAACCATAAAATCCAAGG+CGG | 0.765862 | 5:+32728032 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATACTAAAAATACAATAAA+TGG | + | Chr5:32727920-32727939 | None:intergenic | 10.0% |
| !! | GAAAAATTAGTAATTAATAA+AGG | + | Chr5:32729316-32729335 | None:intergenic | 10.0% |
| !! | TAAATTATTTAGAGATATTA+AGG | - | Chr5:32727675-32727694 | MsG0580026226.01.T01:CDS | 10.0% |
| !! | AAATATCATTTACTAATATG+AGG | + | Chr5:32727591-32727610 | None:intergenic | 15.0% |
| !! | AATTAATAAAGGTAAATGAA+GGG | + | Chr5:32729305-32729324 | None:intergenic | 15.0% |
| !! | TAATTAATAAAGGTAAATGA+AGG | + | Chr5:32729306-32729325 | None:intergenic | 15.0% |
| !! | AGCATATAATCAAGTAAATA+AGG | + | Chr5:32728026-32728045 | None:intergenic | 20.0% |
| !! | GCATATAATCAAGTAAATAA+GGG | + | Chr5:32728025-32728044 | None:intergenic | 20.0% |
| !!! | AAAAAAAGTGTAAAAAAGAG+AGG | - | Chr5:32729246-32729265 | MsG0580026226.01.T01:CDS | 20.0% |
| !!! | CAAGATTGTTTTTCTAAAAT+TGG | + | Chr5:32728903-32728922 | None:intergenic | 20.0% |
| !!! | GTATTTTTATGTTTCATGTT+TGG | - | Chr5:32727473-32727492 | MsG0580026226.01.T01:three_prime_UTR | 20.0% |
| !!! | TTTTAGAAAAACAATCTTGT+TGG | - | Chr5:32728904-32728923 | MsG0580026226.01.T01:intron | 20.0% |
| ! | AAGTCTATGAAAACAAGAAA+TGG | + | Chr5:32727782-32727801 | None:intergenic | 25.0% |
| ! | AATTTCAAAGACTGAAAATG+AGG | + | Chr5:32728505-32728524 | None:intergenic | 25.0% |
| ! | ATAGATATCTAATTGCTGTA+AGG | + | Chr5:32728084-32728103 | None:intergenic | 25.0% |
| ! | CCTACAAAATTCTTGTATAA+TGG | + | Chr5:32729211-32729230 | None:intergenic | 25.0% |
| ! | TAGATATCTAATTGCTGTAA+GGG | + | Chr5:32728083-32728102 | None:intergenic | 25.0% |
| !! | ATATTAAAGCCCTTTTACTT+TGG | - | Chr5:32727842-32727861 | MsG0580026226.01.T01:intron | 25.0% |
| !! | CCATTATACAAGAATTTTGT+AGG | - | Chr5:32729208-32729227 | MsG0580026226.01.T01:CDS | 25.0% |
| !! | TATTAAAGCCCTTTTACTTT+GGG | - | Chr5:32727843-32727862 | MsG0580026226.01.T01:intron | 25.0% |
| !! | TATTGTGATTTAAGATTCTG+TGG | - | Chr5:32728055-32728074 | MsG0580026226.01.T01:CDS | 25.0% |
| !!! | CTGTTTTTATTTTCCTTCTA+CGG | - | Chr5:32727723-32727742 | MsG0580026226.01.T01:CDS | 25.0% |
| AAAACGTTTCCCAAAGTAAA+AGG | + | Chr5:32727855-32727874 | None:intergenic | 30.0% | |
| AAACGTTTCCCAAAGTAAAA+GGG | + | Chr5:32727854-32727873 | None:intergenic | 30.0% | |
| AATAACATGTCAGCAACATT+CGG | + | Chr5:32728741-32728760 | None:intergenic | 30.0% | |
| AATCTTGTTGGATCGAAAAA+AGG | - | Chr5:32728916-32728935 | MsG0580026226.01.T01:intron | 30.0% | |
| AGAAATTGTGATGAGTTTCT+AGG | - | Chr5:32729118-32729137 | MsG0580026226.01.T01:intron | 30.0% | |
| CAAGTTCATGAAAAGAGAAT+TGG | - | Chr5:32729007-32729026 | MsG0580026226.01.T01:intron | 30.0% | |
| GATGCAAAGAAATAGAGTTT+GGG | + | Chr5:32729189-32729208 | None:intergenic | 30.0% | |
| GCATACCTGAATTACAAAAA+GGG | + | Chr5:32728152-32728171 | None:intergenic | 30.0% | |
| TACTGAAACCATAAAATCCA+AGG | + | Chr5:32728641-32728660 | None:intergenic | 30.0% | |
| TGCATACCTGAATTACAAAA+AGG | + | Chr5:32728153-32728172 | None:intergenic | 30.0% | |
| TTACAGAAGCAAGAATGAAT+TGG | + | Chr5:32727515-32727534 | None:intergenic | 30.0% | |
| TTCTGTAATTGAGGATAAGA+GGG | - | Chr5:32727527-32727546 | MsG0580026226.01.T01:CDS | 30.0% | |
| ! | AAGAATTTTGTAGGAAACCA+GGG | - | Chr5:32729217-32729236 | MsG0580026226.01.T01:CDS | 30.0% |
| ! | ATCATAATGGAACCCTAAAA+TGG | - | Chr5:32728960-32728979 | MsG0580026226.01.T01:intron | 30.0% |
| ! | GGTGGATTTGTAATTCAAAA+AGG | - | Chr5:32727955-32727974 | MsG0580026226.01.T01:intron | 30.0% |
| ! | TTGGTTGATATGCATCATAA+TGG | - | Chr5:32728947-32728966 | MsG0580026226.01.T01:intron | 30.0% |
| ! | TTTGCAATTTCAGGTGAAAA+AGG | - | Chr5:32728555-32728574 | MsG0580026226.01.T01:intron | 30.0% |
| AATTGAGGATAAGAGGGATT+TGG | - | Chr5:32727533-32727552 | MsG0580026226.01.T01:CDS | 35.0% | |
| ACCTTTATCCCTACTTATGA+TGG | - | Chr5:32728670-32728689 | MsG0580026226.01.T01:intron | 35.0% | |
| ACTGCATCTTAGATATGAGA+TGG | - | Chr5:32727380-32727399 | MsG0580026226.01.T01:three_prime_UTR | 35.0% | |
| AGGAAATATTTGTTCCACTG+AGG | - | Chr5:32729266-32729285 | MsG0580026226.01.T01:CDS | 35.0% | |
| AGTATTATCTCTTGTACACG+TGG | - | Chr5:32727934-32727953 | MsG0580026226.01.T01:intron | 35.0% | |
| AGTTATAATCGACAGACCAA+AGG | - | Chr5:32729048-32729067 | MsG0580026226.01.T01:intron | 35.0% | |
| ATAACATGTCAGCAACATTC+GGG | + | Chr5:32728740-32728759 | None:intergenic | 35.0% | |
| ATGTTGACAAACTCACAAGT+TGG | + | Chr5:32728365-32728384 | None:intergenic | 35.0% | |
| ATTGTTCTTGCGCTCATTAA+TGG | - | Chr5:32728441-32728460 | MsG0580026226.01.T01:CDS | 35.0% | |
| CATTCTTGCTTCTGTAATTG+AGG | - | Chr5:32727518-32727537 | MsG0580026226.01.T01:exon | 35.0% | |
| CCTTTATCCCTACTTATGAT+GGG | - | Chr5:32728671-32728690 | MsG0580026226.01.T01:intron | 35.0% | |
| CTTCTGTAATTGAGGATAAG+AGG | - | Chr5:32727526-32727545 | MsG0580026226.01.T01:CDS | 35.0% | |
| GAAAATGCATCTTTCAGATC+AGG | + | Chr5:32728472-32728491 | None:intergenic | 35.0% | |
| GGATGCAAAGAAATAGAGTT+TGG | + | Chr5:32729190-32729209 | None:intergenic | 35.0% | |
| GTTTCTGTGTTTGCAATTTC+AGG | - | Chr5:32728546-32728565 | MsG0580026226.01.T01:intron | 35.0% | |
| TAACAGTGTAAGTGCATTGT+TGG | - | Chr5:32728830-32728849 | MsG0580026226.01.T01:intron | 35.0% | |
| TAGATATGAGATGGACATGT+TGG | - | Chr5:32727389-32727408 | MsG0580026226.01.T01:three_prime_UTR | 35.0% | |
| TCACCAGCTGCAATATATAT+CGG | + | Chr5:32728294-32728313 | None:intergenic | 35.0% | |
| TGAAACCATAAAATCCAAGG+CGG | + | Chr5:32728638-32728657 | None:intergenic | 35.0% | |
| TGTTGACAAACTCACAAGTT+GGG | + | Chr5:32728364-32728383 | None:intergenic | 35.0% | |
| ! | ACTGTCCCTTTTTGTAATTC+AGG | - | Chr5:32728144-32728163 | MsG0580026226.01.T01:intron | 35.0% |
| ! | AGGAGATAATTTCTGAAGAG+AGG | - | Chr5:32728190-32728209 | MsG0580026226.01.T01:intron | 35.0% |
| ! | ATTATAACTTTTCGCCGAGT+TGG | + | Chr5:32729037-32729056 | None:intergenic | 35.0% |
| ! | CAAGAATTTTGTAGGAAACC+AGG | - | Chr5:32729216-32729235 | MsG0580026226.01.T01:CDS | 35.0% |
| ! | CAAGTATAGTATGAGTTGAG+AGG | - | Chr5:32729157-32729176 | MsG0580026226.01.T01:CDS | 35.0% |
| ! | CATTTTTCTGCTCGTTGTTT+GGG | - | Chr5:32728398-32728417 | MsG0580026226.01.T01:CDS | 35.0% |
| !! | TAACTAATTTGTTCGTCTGC+AGG | - | Chr5:32728873-32728892 | MsG0580026226.01.T01:intron | 35.0% |
| AACATGGCAAAACTTGTGGA+AGG | - | Chr5:32728694-32728713 | MsG0580026226.01.T01:intron | 40.0% | |
| AAGAGGGATTTGGATCTTCT+CGG | - | Chr5:32727543-32727562 | MsG0580026226.01.T01:CDS | 40.0% | |
| AATTCAGGTATGCATTCCCT+TGG | - | Chr5:32728159-32728178 | MsG0580026226.01.T01:intron | 40.0% | |
| ACAACGAGCAGAAAAATGGA+AGG | + | Chr5:32728396-32728415 | None:intergenic | 40.0% | |
| ACACCGATATATATTGCAGC+TGG | - | Chr5:32728288-32728307 | MsG0580026226.01.T01:intron | 40.0% | |
| ATTATCTCTTGTACACGTGG+TGG | - | Chr5:32727937-32727956 | MsG0580026226.01.T01:intron | 40.0% | |
| ATTGCAGCTGGTGAGATTTA+TGG | - | Chr5:32728300-32728319 | MsG0580026226.01.T01:intron | 40.0% | |
| CCAAACAACGAGCAGAAAAA+TGG | + | Chr5:32728400-32728419 | None:intergenic | 40.0% | |
| CCATGTTCCCATCATAAGTA+GGG | + | Chr5:32728681-32728700 | None:intergenic | 40.0% | |
| CCCATCATAAGTAGGGATAA+AGG | + | Chr5:32728674-32728693 | None:intergenic | 40.0% | |
| CTTCTCGGTTTCTGAATAAC+AGG | - | Chr5:32727558-32727577 | MsG0580026226.01.T01:CDS | 40.0% | |
| GGGTAAATACATACCTTCGA+TGG | + | Chr5:32728720-32728739 | None:intergenic | 40.0% | |
| GTTGACAAACTCACAAGTTG+GGG | + | Chr5:32728363-32728382 | None:intergenic | 40.0% | |
| TAGAAATAGTCCTCCTCCTT+TGG | + | Chr5:32729067-32729086 | None:intergenic | 40.0% | |
| TATAATCGACAGACCAAAGG+AGG | - | Chr5:32729051-32729070 | MsG0580026226.01.T01:intron | 40.0% | |
| TATCTCCTTTCTCTCACCAA+GGG | + | Chr5:32728178-32728197 | None:intergenic | 40.0% | |
| TCGAAAAAAGGTCGTGGAAT+TGG | - | Chr5:32728928-32728947 | MsG0580026226.01.T01:intron | 40.0% | |
| TTATCTCCTTTCTCTCACCA+AGG | + | Chr5:32728179-32728198 | None:intergenic | 40.0% | |
| TTCTTGCGCTCATTAATGGT+TGG | - | Chr5:32728445-32728464 | MsG0580026226.01.T01:CDS | 40.0% | |
| TTGTAACGAAAAGCCGTAGA+AGG | + | Chr5:32727739-32727758 | None:intergenic | 40.0% | |
| ! | GCTCTGATAGAGAAACCTTT+TGG | - | Chr5:32727617-32727636 | MsG0580026226.01.T01:CDS | 40.0% |
| !! | CCATTTTTCTGCTCGTTGTT+TGG | - | Chr5:32728397-32728416 | MsG0580026226.01.T01:CDS | 40.0% |
| !!! | ACACTTTTTTTCAGCTACCC+TGG | + | Chr5:32729237-32729256 | None:intergenic | 40.0% |
| !!! | CCTCAATCTTTTGAGTTCCT+CGG | + | Chr5:32727454-32727473 | None:intergenic | 40.0% |
| ACCTAAGGCTCGAAGAACTA+AGG | + | Chr5:32728256-32728275 | None:intergenic | 45.0% | |
| AGAGAATTGGACAGCCAACT+CGG | - | Chr5:32729020-32729039 | MsG0580026226.01.T01:intron | 45.0% | |
| AGATTTATGGCGGTGAACGT+AGG | - | Chr5:32728313-32728332 | MsG0580026226.01.T01:intron | 45.0% | |
| ATGTCCTTTGACACCAGAAG+AGG | - | Chr5:32728227-32728246 | MsG0580026226.01.T01:intron | 45.0% | |
| CAAGAATGAATTGGAAGCCG+AGG | + | Chr5:32727506-32727525 | None:intergenic | 45.0% | |
| CCACTACTCTCGTATCCAAA+AGG | + | Chr5:32727635-32727654 | None:intergenic | 45.0% | |
| CCGAGGAACTCAAAAGATTG+AGG | - | Chr5:32727451-32727470 | MsG0580026226.01.T01:three_prime_UTR | 45.0% | |
| CCTAAAATGGCACGAGTTTG+CGG | - | Chr5:32728973-32728992 | MsG0580026226.01.T01:intron | 45.0% | |
| CTAAGATGCAGTGCCACAAA+AGG | + | Chr5:32727372-32727391 | None:intergenic | 45.0% | |
| GCCATGTTCCCATCATAAGT+AGG | + | Chr5:32728682-32728701 | None:intergenic | 45.0% | |
| GTTGGATCGAAAAAAGGTCG+TGG | - | Chr5:32728922-32728941 | MsG0580026226.01.T01:intron | 45.0% | |
| TCTGAAGAGAGGAGATCACA+GGG | - | Chr5:32728201-32728220 | MsG0580026226.01.T01:intron | 45.0% | |
| TGGGAACATGGCAAAACTTG+TGG | - | Chr5:32728690-32728709 | MsG0580026226.01.T01:intron | 45.0% | |
| TGTCTCCCTACCAAAACCTA+AGG | + | Chr5:32728271-32728290 | None:intergenic | 45.0% | |
| ! | CCCTACTTATGATGGGAACA+TGG | - | Chr5:32728678-32728697 | MsG0580026226.01.T01:intron | 45.0% |
| ! | CCTTTTGGATACGAGAGTAG+TGG | - | Chr5:32727632-32727651 | MsG0580026226.01.T01:CDS | 45.0% |
| ! | GCTTTCTCAGGTTGTACTCA+GGG | - | Chr5:32727411-32727430 | MsG0580026226.01.T01:three_prime_UTR | 45.0% |
| ! | GTTCTTCGAGCCTTAGGTTT+TGG | - | Chr5:32728258-32728277 | MsG0580026226.01.T01:intron | 45.0% |
| ! | TTCTGAAGAGAGGAGATCAC+AGG | - | Chr5:32728200-32728219 | MsG0580026226.01.T01:intron | 45.0% |
| !! | AGTAGGGATAAAGGTGTCAC+TGG | + | Chr5:32728665-32728684 | None:intergenic | 45.0% |
| !! | ATGGACATGTTGGCTTTCTC+AGG | - | Chr5:32727399-32727418 | MsG0580026226.01.T01:three_prime_UTR | 45.0% |
| !! | TCGAGCCTTAGGTTTTGGTA+GGG | - | Chr5:32728263-32728282 | MsG0580026226.01.T01:intron | 45.0% |
| !! | TTCGAGCCTTAGGTTTTGGT+AGG | - | Chr5:32728262-32728281 | MsG0580026226.01.T01:intron | 45.0% |
| !!! | CGCAAACTCGTGCCATTTTA+GGG | + | Chr5:32728975-32728994 | None:intergenic | 45.0% |
| AAATGGCACGAGTTTGCGGA+TGG | - | Chr5:32728977-32728996 | MsG0580026226.01.T01:intron | 50.0% | |
| AACTTGTGGAAGGCCATCGA+AGG | - | Chr5:32728704-32728723 | MsG0580026226.01.T01:intron | 50.0% | |
| AATCGACAGACCAAAGGAGG+AGG | - | Chr5:32729054-32729073 | MsG0580026226.01.T01:intron | 50.0% | |
| ACATAGACACTCGTGAGGGT+TGG | + | Chr5:32729092-32729111 | None:intergenic | 50.0% | |
| ATGAATTGGAAGCCGAGGCA+TGG | + | Chr5:32727501-32727520 | None:intergenic | 50.0% | |
| CCAGAATCACTCATCGCAGA+TGG | - | Chr5:32728612-32728631 | MsG0580026226.01.T01:intron | 50.0% | |
| CCATCTGCGATGAGTGATTC+TGG | + | Chr5:32728615-32728634 | None:intergenic | 50.0% | |
| CCTCACATAGACACTCGTGA+GGG | + | Chr5:32729096-32729115 | None:intergenic | 50.0% | |
| GCAGCTGGTGAGATTTATGG+CGG | - | Chr5:32728303-32728322 | MsG0580026226.01.T01:intron | 50.0% | |
| GCATATTCTGCAAGCCTCAG+TGG | + | Chr5:32729283-32729302 | None:intergenic | 50.0% | |
| GCATTCCCTTGGTGAGAGAA+AGG | - | Chr5:32728170-32728189 | MsG0580026226.01.T01:intron | 50.0% | |
| TCCTCACATAGACACTCGTG+AGG | + | Chr5:32729097-32729116 | None:intergenic | 50.0% | |
| TCCTTTGACACCAGAAGAGG+CGG | - | Chr5:32728230-32728249 | MsG0580026226.01.T01:intron | 50.0% | |
| TGAATTGGAAGCCGAGGCAT+GGG | + | Chr5:32727500-32727519 | None:intergenic | 50.0% | |
| TTGCTCAGAGAAAGAAGCCG+AGG | - | Chr5:32727434-32727453 | MsG0580026226.01.T01:three_prime_UTR | 50.0% | |
| ! | GATGGCCGCCTTGGATTTTA+TGG | - | Chr5:32728630-32728649 | MsG0580026226.01.T01:intron | 50.0% |
| ! | GCCTTAGTTCTTCGAGCCTT+AGG | - | Chr5:32728252-32728271 | MsG0580026226.01.T01:intron | 50.0% |
| ! | GGCTTTCTCAGGTTGTACTC+AGG | - | Chr5:32727410-32727429 | MsG0580026226.01.T01:three_prime_UTR | 50.0% |
| ! | TCACGAGAAGGGACCTTTTG+TGG | - | Chr5:32727356-32727375 | MsG0580026226.01.T01:three_prime_UTR | 50.0% |
| !!! | CCGCAAACTCGTGCCATTTT+AGG | + | Chr5:32728976-32728995 | None:intergenic | 50.0% |
| AGAACTAAGGCCGCCTCTTC+TGG | + | Chr5:32728243-32728262 | None:intergenic | 55.0% | |
| CCCTCACGAGTGTCTATGTG+AGG | - | Chr5:32729093-32729112 | MsG0580026226.01.T01:intron | 55.0% | |
| GAATTGGAAGCCGAGGCATG+GGG | + | Chr5:32727499-32727518 | None:intergenic | 55.0% | |
| TCATGTTTGGCCCCATGCCT+CGG | - | Chr5:32727486-32727505 | MsG0580026226.01.T01:three_prime_UTR | 55.0% | |
| ! | GCCGCCTCTTCTGGTGTCAA+AGG | + | Chr5:32728234-32728253 | None:intergenic | 60.0% |
| CTCATCGCAGATGGCCGCCT+TGG | - | Chr5:32728621-32728640 | MsG0580026226.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 32727351 | 32729338 | 32727351 | ID=MsG0580026226.01;Name=MsG0580026226.01 |
| Chr5 | mRNA | 32727351 | 32729338 | 32727351 | ID=MsG0580026226.01.T01;Parent=MsG0580026226.01;Name=MsG0580026226.01.T01;_AED=0.49;_eAED=0.53;_QI=0|0.66|0.75|1|1|0.75|4|173|281 |
| Chr5 | exon | 32727351 | 32727794 | 32727351 | ID=MsG0580026226.01.T01:exon:25174;Parent=MsG0580026226.01.T01 |
| Chr5 | exon | 32727964 | 32728121 | 32727964 | ID=MsG0580026226.01.T01:exon:25173;Parent=MsG0580026226.01.T01 |
| Chr5 | exon | 32728321 | 32728523 | 32728321 | ID=MsG0580026226.01.T01:exon:25172;Parent=MsG0580026226.01.T01 |
| Chr5 | exon | 32729125 | 32729338 | 32729125 | ID=MsG0580026226.01.T01:exon:25171;Parent=MsG0580026226.01.T01 |
| Chr5 | CDS | 32729125 | 32729338 | 32729125 | ID=MsG0580026226.01.T01:cds;Parent=MsG0580026226.01.T01 |
| Chr5 | CDS | 32728321 | 32728523 | 32728321 | ID=MsG0580026226.01.T01:cds;Parent=MsG0580026226.01.T01 |
| Chr5 | CDS | 32727964 | 32728121 | 32727964 | ID=MsG0580026226.01.T01:cds;Parent=MsG0580026226.01.T01 |
| Chr5 | CDS | 32727524 | 32727794 | 32727524 | ID=MsG0580026226.01.T01:cds;Parent=MsG0580026226.01.T01 |
| Chr5 | three_prime_UTR | 32727351 | 32727523 | 32727351 | ID=MsG0580026226.01.T01:three_prime_utr;Parent=MsG0580026226.01.T01 |
| Gene Sequence |
| Protein sequence |
