Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004398.01.T01 | XP_013468929.1 | 73.656 | 186 | 10 | 2 | 1 | 149 | 1 | 184 | 5.51E-86 | 259 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004398.01.T01 | Q949S5 | 30.588 | 170 | 81 | 4 | 16 | 148 | 86 | 255 | 2.15E-18 | 82 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047791.01 | MsG0180004398.01 | 0.814917 | 1.206705e-51 | 8.201797e-49 |
| MsG0080048152.01 | MsG0180004398.01 | 0.827142 | 1.841740e-54 | 1.762716e-51 |
| MsG0080048687.01 | MsG0180004398.01 | 0.850222 | 1.952797e-60 | 3.798415e-57 |
| MsG0080048971.01 | MsG0180004398.01 | 0.806913 | 6.530520e-50 | 3.588076e-47 |
| MsG0080049135.01 | MsG0180004398.01 | 0.801391 | 9.203817e-49 | 4.390202e-46 |
| MsG0180000331.01 | MsG0180004398.01 | 0.806370 | 8.502613e-50 | 4.606900e-47 |
| MsG0180000355.01 | MsG0180004398.01 | 0.824283 | 8.777781e-54 | 7.739949e-51 |
| MsG0180000384.01 | MsG0180004398.01 | 0.801559 | 8.505369e-49 | 4.074186e-46 |
| MsG0180000614.01 | MsG0180004398.01 | 0.820736 | 5.857669e-53 | 4.673269e-50 |
| MsG0180000806.01 | MsG0180004398.01 | 0.814199 | 1.740181e-51 | 1.160053e-48 |
| MsG0180001118.01 | MsG0180004398.01 | 0.805188 | 1.506291e-49 | 7.917930e-47 |
| MsG0180002489.01 | MsG0180004398.01 | 0.800846 | 1.189996e-48 | 5.598708e-46 |
| MsG0180002547.01 | MsG0180004398.01 | 0.827656 | 1.386959e-54 | 1.347388e-51 |
| MsG0180003174.01 | MsG0180004398.01 | 0.819951 | 8.867522e-53 | 6.922487e-50 |
| MsG0180003548.01 | MsG0180004398.01 | 0.811911 | 5.524097e-51 | 3.462403e-48 |
| MsG0180003572.01 | MsG0180004398.01 | 0.806864 | 6.688005e-50 | 3.670053e-47 |
| MsG0180003651.01 | MsG0180004398.01 | 0.822482 | 2.313847e-53 | 1.939145e-50 |
| MsG0180003793.01 | MsG0180004398.01 | 0.892019 | 2.333369e-74 | 2.094636e-70 |
| MsG0180003922.01 | MsG0180004398.01 | 0.807995 | 3.849123e-50 | 2.175292e-47 |
| MsG0180004009.01 | MsG0180004398.01 | 0.823168 | 1.601950e-53 | 1.368855e-50 |
| MsG0180004130.01 | MsG0180004398.01 | 0.846300 | 2.369028e-59 | 4.059042e-56 |
| MsG0180004293.01 | MsG0180004398.01 | -0.820147 | 7.997596e-53 | 6.277738e-50 |
| MsG0180004398.01 | MsG0180004481.01 | 0.819423 | 1.170676e-52 | 9.004892e-50 |
| MsG0180004398.01 | MsG0180004482.01 | 0.819946 | 8.893649e-53 | 6.941600e-50 |
| MsG0180004398.01 | MsG0180004854.01 | 0.857321 | 1.767359e-62 | 4.344852e-59 |
| MsG0180004398.01 | MsG0180004861.01 | 0.860436 | 2.068691e-63 | 5.654408e-60 |
| MsG0180004398.01 | MsG0180005334.01 | 0.849230 | 3.694041e-60 | 6.957426e-57 |
| MsG0180004398.01 | MsG0180005424.01 | 0.822471 | 2.327512e-53 | 1.949989e-50 |
| MsG0180004398.01 | MsG0180005575.01 | 0.806679 | 7.317740e-50 | 3.996228e-47 |
| MsG0180004398.01 | MsG0180005913.01 | 0.814090 | 1.838672e-51 | 1.222113e-48 |
| MsG0180004398.01 | MsG0280006376.01 | 0.812123 | 4.966718e-51 | 3.131163e-48 |
| MsG0180004398.01 | MsG0280006422.01 | 0.800046 | 1.731701e-48 | 7.983386e-46 |
| MsG0180004398.01 | MsG0280006545.01 | 0.813841 | 2.086587e-51 | 1.377593e-48 |
| MsG0180004398.01 | MsG0280006596.01 | 0.803100 | 4.095410e-49 | 2.040138e-46 |
| MsG0180004398.01 | MsG0280006993.01 | 0.854563 | 1.132562e-61 | 2.539835e-58 |
| MsG0180004398.01 | MsG0280007161.01 | 0.806479 | 8.061937e-50 | 4.380453e-47 |
| MsG0180004398.01 | MsG0280007847.01 | 0.876640 | 1.188927e-68 | 5.807923e-65 |
| MsG0180004398.01 | MsG0280008118.01 | 0.848082 | 7.687142e-60 | 1.394336e-56 |
| MsG0180004398.01 | MsG0280009141.01 | 0.832626 | 8.489273e-56 | 9.542049e-53 |
| MsG0180004398.01 | MsG0280009575.01 | 0.802911 | 4.480230e-49 | 2.221299e-46 |
| MsG0180004398.01 | MsG0280010013.01 | 0.803503 | 3.380124e-49 | 1.701482e-46 |
| MsG0180004398.01 | MsG0280010776.01 | 0.849575 | 2.961925e-60 | 5.639730e-57 |
| MsG0180004398.01 | MsG0280010801.01 | 0.809361 | 1.965500e-50 | 1.151686e-47 |
| MsG0180004398.01 | MsG0280011304.01 | 0.821096 | 4.840758e-53 | 3.901181e-50 |
| MsG0180004398.01 | MsG0380011614.01 | 0.832691 | 8.180341e-56 | 9.212703e-53 |
| MsG0180004398.01 | MsG0380011747.01 | 0.851698 | 7.489460e-61 | 1.528615e-57 |
| MsG0180004398.01 | MsG0380012073.01 | 0.843623 | 1.250206e-58 | 1.967686e-55 |
| MsG0180004398.01 | MsG0380012570.01 | 0.800236 | 1.584314e-48 | 7.339234e-46 |
| MsG0180004398.01 | MsG0380013085.01 | 0.822302 | 2.547530e-53 | 2.124098e-50 |
| MsG0180004398.01 | MsG0380013579.01 | 0.801888 | 7.280307e-49 | 3.516809e-46 |
| MsG0180004398.01 | MsG0380013641.01 | 0.817209 | 3.713627e-52 | 2.687482e-49 |
| MsG0180004398.01 | MsG0380014175.01 | 0.822544 | 2.238036e-53 | 1.879029e-50 |
| MsG0180004398.01 | MsG0380014580.01 | 0.804153 | 2.477084e-49 | 1.267872e-46 |
| MsG0180004398.01 | MsG0380015027.01 | 0.845598 | 3.674968e-59 | 6.155620e-56 |
| MsG0180004398.01 | MsG0380015118.01 | 0.810312 | 1.227175e-50 | 7.372446e-48 |
| MsG0180004398.01 | MsG0380015435.01 | 0.812555 | 3.997040e-51 | 2.549268e-48 |
| MsG0180004398.01 | MsG0380015466.01 | 0.802127 | 6.502087e-49 | 3.159812e-46 |
| MsG0180004398.01 | MsG0380015598.01 | -0.824231 | 9.026503e-54 | 7.948274e-51 |
| MsG0180004398.01 | MsG0380015818.01 | 0.804010 | 2.652588e-49 | 1.352735e-46 |
| MsG0180004398.01 | MsG0380016290.01 | 0.814485 | 1.504557e-51 | 1.010839e-48 |
| MsG0180004398.01 | MsG0380016505.01 | 0.813633 | 2.318749e-51 | 1.522272e-48 |
| MsG0180004398.01 | MsG0380016560.01 | 0.811690 | 6.172072e-51 | 3.845838e-48 |
| MsG0180004398.01 | MsG0380016671.01 | 0.817595 | 3.039043e-52 | 2.222718e-49 |
| MsG0180004398.01 | MsG0380017556.01 | 0.833881 | 4.132499e-56 | 4.823056e-53 |
| MsG0180004398.01 | MsG0380018033.01 | 0.829930 | 3.907314e-55 | 4.056788e-52 |
| MsG0180004398.01 | MsG0480018213.01 | 0.801201 | 1.006821e-48 | 4.779570e-46 |
| MsG0180004398.01 | MsG0480018278.01 | 0.821025 | 5.027877e-53 | 4.044152e-50 |
| MsG0180004398.01 | MsG0480018477.01 | 0.865668 | 4.998793e-65 | 1.640004e-61 |
| MsG0180004398.01 | MsG0480018894.01 | 0.821702 | 3.507622e-53 | 2.874977e-50 |
| MsG0180004398.01 | MsG0480019380.01 | 0.842392 | 2.659761e-58 | 4.027402e-55 |
| MsG0180004398.01 | MsG0480020879.01 | 0.812595 | 3.917266e-51 | 2.500984e-48 |
| MsG0180004398.01 | MsG0480021037.01 | 0.825131 | 5.541501e-54 | 5.007257e-51 |
| MsG0180004398.01 | MsG0480021077.01 | -0.836778 | 7.664843e-57 | 9.758894e-54 |
| MsG0180004398.01 | MsG0480021448.01 | 0.818563 | 1.836680e-52 | 1.379523e-49 |
| MsG0180004398.01 | MsG0480021706.01 | 0.816896 | 4.364933e-52 | 3.131918e-49 |
| MsG0180004398.01 | MsG0480021768.01 | 0.827071 | 1.915076e-54 | 1.829122e-51 |
| MsG0180004398.01 | MsG0480022035.01 | 0.806554 | 7.776266e-50 | 4.233313e-47 |
| MsG0180004398.01 | MsG0480022223.01 | 0.828161 | 1.048516e-54 | 1.033847e-51 |
| MsG0180004398.01 | MsG0480022696.01 | 0.816900 | 4.356417e-52 | 3.126138e-49 |
| MsG0180004398.01 | MsG0480022780.01 | 0.867387 | 1.421206e-65 | 4.953703e-62 |
| MsG0180004398.01 | MsG0480022960.01 | 0.843273 | 1.550548e-58 | 2.413476e-55 |
| MsG0180004398.01 | MsG0480023149.01 | 0.825857 | 3.728244e-54 | 3.439386e-51 |
| MsG0180004398.01 | MsG0480023221.01 | 0.853920 | 1.737110e-61 | 3.813823e-58 |
| MsG0180004398.01 | MsG0480023387.01 | 0.825075 | 5.711106e-54 | 5.152382e-51 |
| MsG0180004398.01 | MsG0580024084.01 | 0.838337 | 3.052766e-57 | 4.076123e-54 |
| MsG0180004398.01 | MsG0580024191.01 | 0.842751 | 2.136200e-58 | 3.270375e-55 |
| MsG0180004398.01 | MsG0580024339.01 | 0.812381 | 4.362347e-51 | 2.769466e-48 |
| MsG0180004398.01 | MsG0580024619.01 | 0.823158 | 1.609870e-53 | 1.375245e-50 |
| MsG0180004398.01 | MsG0580024727.01 | 0.813875 | 2.051159e-51 | 1.355476e-48 |
| MsG0180004398.01 | MsG0580025268.01 | 0.835440 | 1.675950e-56 | 2.049546e-53 |
| MsG0180004398.01 | MsG0580025363.01 | -0.807634 | 4.592194e-50 | 2.570828e-47 |
| MsG0180004398.01 | MsG0580025400.01 | 0.802863 | 4.583936e-49 | 2.269919e-46 |
| MsG0180004398.01 | MsG0580025756.01 | 0.838128 | 3.455805e-57 | 4.584744e-54 |
| MsG0180004398.01 | MsG0580026226.01 | 0.809681 | 1.678191e-50 | 9.917188e-48 |
| MsG0180004398.01 | MsG0580026301.01 | 0.803065 | 4.164275e-49 | 2.072579e-46 |
| MsG0180004398.01 | MsG0580026485.01 | 0.837411 | 5.279907e-57 | 6.852416e-54 |
| MsG0180004398.01 | MsG0580028044.01 | 0.818284 | 2.124497e-52 | 1.583446e-49 |
| MsG0180004398.01 | MsG0580028094.01 | 0.804608 | 1.990616e-49 | 1.030872e-46 |
| MsG0180004398.01 | MsG0580028597.01 | 0.849721 | 2.696725e-60 | 5.159472e-57 |
| MsG0180004398.01 | MsG0580029132.01 | 0.805894 | 1.070942e-49 | 5.732591e-47 |
| MsG0180004398.01 | MsG0580029258.01 | 0.807827 | 4.179041e-50 | 2.351293e-47 |
| MsG0180004398.01 | MsG0580030010.01 | 0.827500 | 1.511997e-54 | 1.462306e-51 |
| MsG0180004398.01 | MsG0680030350.01 | 0.826082 | 3.297952e-54 | 3.061568e-51 |
| MsG0180004398.01 | MsG0680030555.01 | 0.807039 | 6.141177e-50 | 3.385231e-47 |
| MsG0180004398.01 | MsG0680031628.01 | 0.844627 | 6.725505e-59 | 1.092256e-55 |
| MsG0180004398.01 | MsG0680031964.01 | 0.818477 | 1.920425e-52 | 1.439121e-49 |
| MsG0180004398.01 | MsG0680031967.01 | 0.843264 | 1.559678e-58 | 2.426938e-55 |
| MsG0180004398.01 | MsG0680034602.01 | 0.811638 | 6.333755e-51 | 3.941075e-48 |
| MsG0180004398.01 | MsG0680034671.01 | 0.815730 | 7.958617e-52 | 5.531584e-49 |
| MsG0180004398.01 | MsG0680035577.01 | 0.817706 | 2.869082e-52 | 2.104821e-49 |
| MsG0180004398.01 | MsG0680035888.01 | 0.831156 | 1.958328e-55 | 2.107331e-52 |
| MsG0180004398.01 | MsG0780036186.01 | 0.833291 | 5.804043e-56 | 6.654537e-53 |
| MsG0180004398.01 | MsG0780036240.01 | 0.846581 | 1.985916e-59 | 3.433981e-56 |
| MsG0180004398.01 | MsG0780036544.01 | -0.820614 | 6.248776e-53 | 4.968236e-50 |
| MsG0180004398.01 | MsG0780037093.01 | 0.830057 | 3.637548e-55 | 3.790288e-52 |
| MsG0180004398.01 | MsG0780037240.01 | 0.847228 | 1.320563e-59 | 2.331450e-56 |
| MsG0180004398.01 | MsG0780038400.01 | 0.876847 | 1.008551e-68 | 4.964344e-65 |
| MsG0180004398.01 | MsG0780038892.01 | 0.806424 | 8.281992e-50 | 4.493578e-47 |
| MsG0180004398.01 | MsG0780039643.01 | 0.814598 | 1.420125e-51 | 9.570212e-49 |
| MsG0180004398.01 | MsG0780040569.01 | 0.858331 | 8.864132e-63 | 2.254148e-59 |
| MsG0180004398.01 | MsG0780041016.01 | 0.806236 | 9.074042e-50 | 4.900068e-47 |
| MsG0180004398.01 | MsG0780041137.01 | 0.813862 | 2.064310e-51 | 1.363669e-48 |
| MsG0180004398.01 | MsG0780041223.01 | 0.903998 | 1.941545e-79 | 2.942890e-75 |
| MsG0180004398.01 | MsG0780041268.01 | 0.846285 | 2.391599e-59 | 4.095670e-56 |
| MsG0180004398.01 | MsG0780041423.01 | 0.802220 | 6.221253e-49 | 3.030511e-46 |
| MsG0180004398.01 | MsG0780041440.01 | 0.812233 | 4.699567e-51 | 2.971727e-48 |
| MsG0180004398.01 | MsG0880042033.01 | 0.841829 | 3.748519e-58 | 5.575348e-55 |
| MsG0180004398.01 | MsG0880042128.01 | 0.814551 | 1.454254e-51 | 9.788017e-49 |
| MsG0180004398.01 | MsG0880042129.01 | 0.816113 | 6.536511e-52 | 4.590822e-49 |
| MsG0180004398.01 | MsG0880042519.01 | 0.823179 | 1.592531e-53 | 1.361216e-50 |
| MsG0180004398.01 | MsG0880042795.01 | 0.848864 | 4.671101e-60 | 8.691854e-57 |
| MsG0180004398.01 | MsG0880042978.01 | 0.807214 | 5.639489e-50 | 3.122858e-47 |
| MsG0180004398.01 | MsG0880042991.01 | 0.854429 | 1.238201e-61 | 2.764374e-58 |
| MsG0180004398.01 | MsG0880043592.01 | 0.820334 | 7.246137e-53 | 5.716836e-50 |
| MsG0180004398.01 | MsG0880044975.01 | 0.828766 | 7.490429e-55 | 7.515951e-52 |
| MsG0180004398.01 | MsG0880045145.01 | 0.832250 | 1.052228e-55 | 1.169438e-52 |
| MsG0180004398.01 | MsG0880045631.01 | 0.801547 | 8.553979e-49 | 4.096199e-46 |
| MsG0180004398.01 | MsG0880045656.01 | 0.845712 | 3.423177e-59 | 5.756118e-56 |
| MsG0180004398.01 | MsG0880045684.01 | 0.848147 | 7.374944e-60 | 1.340544e-56 |
| MsG0180004398.01 | MsG0880045951.01 | 0.845211 | 4.676774e-59 | 7.737365e-56 |
| MsG0180004398.01 | MsG0880045965.01 | 0.808391 | 3.169003e-50 | 1.809791e-47 |
| MsG0180004398.01 | MsG0880046074.01 | 0.830971 | 2.174427e-55 | 2.327179e-52 |
| MsG0180004398.01 | MsG0880046177.01 | 0.829966 | 3.829706e-55 | 3.980204e-52 |
| MsG0180004398.01 | MsG0880046517.01 | 0.808952 | 2.405347e-50 | 1.393947e-47 |
| MsG0180004398.01 | MsG0880047212.01 | 0.832778 | 7.782729e-56 | 8.787725e-53 |
| MsG0180004398.01 | MsG0880047427.01 | 0.805842 | 1.098223e-49 | 5.870928e-47 |
| MsG0180004398.01 | MsG0880047428.01 | 0.812007 | 5.265669e-51 | 3.309154e-48 |
| MsG0180004398.01 | MsG0880047470.01 | 0.811640 | 6.328317e-51 | 3.937908e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004398.01.T01 | MTR_1g078470 | 73.656 | 186 | 10 | 2 | 1 | 149 | 1 | 184 | 6.68e-90 | 259 |
| MsG0180004398.01.T01 | MTR_1g079180 | 61.404 | 171 | 27 | 3 | 17 | 149 | 96 | 265 | 5.10e-63 | 194 |
| MsG0180004398.01.T01 | MTR_1g079370 | 54.645 | 183 | 39 | 4 | 11 | 149 | 83 | 265 | 3.83e-56 | 176 |
| MsG0180004398.01.T01 | MTR_1g079200 | 57.143 | 175 | 31 | 4 | 17 | 149 | 92 | 264 | 4.53e-54 | 171 |
| MsG0180004398.01.T01 | MTR_1g079380 | 53.005 | 183 | 42 | 4 | 11 | 149 | 83 | 265 | 1.82e-52 | 168 |
| MsG0180004398.01.T01 | MTR_1g100597 | 48.677 | 189 | 50 | 4 | 8 | 149 | 84 | 272 | 3.06e-48 | 157 |
| MsG0180004398.01.T01 | MTR_1g079460 | 50.000 | 174 | 45 | 4 | 16 | 149 | 95 | 266 | 6.65e-45 | 148 |
| MsG0180004398.01.T01 | MTR_1g079260 | 47.514 | 181 | 48 | 5 | 16 | 149 | 92 | 272 | 1.94e-41 | 139 |
| MsG0180004398.01.T01 | MTR_1g079230 | 44.505 | 182 | 53 | 4 | 16 | 149 | 92 | 273 | 2.77e-37 | 129 |
| MsG0180004398.01.T01 | MTR_1g100613 | 46.341 | 164 | 39 | 3 | 17 | 131 | 78 | 241 | 1.28e-36 | 126 |
| MsG0180004398.01.T01 | MTR_1g079850 | 43.243 | 185 | 53 | 4 | 17 | 149 | 97 | 281 | 3.68e-36 | 126 |
| MsG0180004398.01.T01 | MTR_1g079240 | 45.029 | 171 | 47 | 5 | 17 | 149 | 18 | 179 | 2.30e-30 | 108 |
| MsG0180004398.01.T01 | MTR_1g026510 | 41.489 | 188 | 55 | 6 | 17 | 149 | 96 | 283 | 3.19e-30 | 111 |
| MsG0180004398.01.T01 | MTR_3g452600 | 40.805 | 174 | 61 | 4 | 16 | 149 | 96 | 267 | 9.03e-29 | 106 |
| MsG0180004398.01.T01 | MTR_1g079250 | 41.146 | 192 | 63 | 5 | 8 | 149 | 87 | 278 | 1.39e-27 | 104 |
| MsG0180004398.01.T01 | MTR_1g079410 | 41.808 | 177 | 57 | 6 | 16 | 149 | 100 | 273 | 2.95e-27 | 102 |
| MsG0180004398.01.T01 | MTR_3g450990 | 60.465 | 86 | 29 | 3 | 67 | 149 | 200 | 283 | 1.39e-24 | 95.9 |
| MsG0180004398.01.T01 | MTR_2g079100 | 37.647 | 170 | 66 | 3 | 17 | 146 | 92 | 261 | 1.54e-22 | 90.5 |
| MsG0180004398.01.T01 | MTR_3g006850 | 37.143 | 210 | 58 | 6 | 14 | 149 | 106 | 315 | 4.45e-22 | 90.1 |
| MsG0180004398.01.T01 | MTR_7g112550 | 35.165 | 182 | 65 | 6 | 21 | 149 | 102 | 283 | 1.28e-21 | 88.2 |
| MsG0180004398.01.T01 | MTR_1g079400 | 37.297 | 185 | 70 | 5 | 11 | 149 | 95 | 279 | 1.13e-20 | 85.5 |
| MsG0180004398.01.T01 | MTR_1g076870 | 54.878 | 82 | 20 | 2 | 67 | 131 | 54 | 135 | 6.76e-20 | 80.5 |
| MsG0180004398.01.T01 | MTR_1g083580 | 34.270 | 178 | 68 | 3 | 21 | 149 | 104 | 281 | 1.55e-19 | 82.4 |
| MsG0180004398.01.T01 | MTR_7g096300 | 36.774 | 155 | 55 | 4 | 17 | 133 | 95 | 244 | 1.12e-18 | 82.0 |
| MsG0180004398.01.T01 | MTR_1g079130 | 32.804 | 189 | 63 | 6 | 25 | 149 | 1 | 189 | 6.48e-17 | 73.9 |
| MsG0180004398.01.T01 | MTR_1g079220 | 72.000 | 50 | 12 | 1 | 67 | 116 | 16 | 63 | 1.25e-16 | 70.1 |
| MsG0180004398.01.T01 | MTR_1g079350 | 33.673 | 196 | 81 | 8 | 2 | 149 | 81 | 275 | 1.41e-15 | 72.0 |
| MsG0180004398.01.T01 | MTR_1g079210 | 52.381 | 63 | 18 | 1 | 66 | 116 | 57 | 119 | 1.67e-13 | 63.9 |
| MsG0180004398.01.T01 | MTR_1g079140 | 60.417 | 48 | 19 | 0 | 21 | 68 | 110 | 157 | 8.84e-13 | 64.3 |
| MsG0180004398.01.T01 | MTR_4g023570 | 32.857 | 140 | 77 | 4 | 26 | 149 | 99 | 237 | 1.01e-12 | 63.5 |
| MsG0180004398.01.T01 | MTR_3g058640 | 59.184 | 49 | 18 | 1 | 68 | 116 | 60 | 106 | 1.38e-12 | 60.5 |
| MsG0180004398.01.T01 | MTR_1g079340 | 51.899 | 79 | 31 | 4 | 75 | 149 | 250 | 325 | 2.49e-12 | 63.2 |
| MsG0180004398.01.T01 | MTR_1g079390 | 64.583 | 48 | 16 | 1 | 98 | 144 | 8 | 55 | 9.95e-11 | 54.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004398.01.T01 | AT2G02360 | 31.977 | 172 | 66 | 6 | 21 | 148 | 104 | 268 | 3.01e-20 | 84.3 |
| MsG0180004398.01.T01 | AT5G24560 | 37.405 | 131 | 49 | 2 | 21 | 149 | 93 | 192 | 1.69e-19 | 80.9 |
| MsG0180004398.01.T01 | AT1G80110 | 30.588 | 170 | 81 | 4 | 16 | 148 | 86 | 255 | 2.19e-19 | 82.0 |
| MsG0180004398.01.T01 | AT2G02340 | 30.286 | 175 | 74 | 5 | 21 | 148 | 128 | 301 | 4.52e-17 | 76.3 |
| MsG0180004398.01.T01 | AT2G02300 | 31.111 | 180 | 91 | 7 | 1 | 149 | 104 | 281 | 4.06e-15 | 70.9 |
Find 39 sgRNAs with CRISPR-Local
Find 131 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATTAATATGCCTGATTCT+AGG | 0.268635 | 1:-77482796 | MsG0180004398.01.T01:intron |
| CTACCTTCCACTTCCACATT+TGG | 0.297421 | 1:+77481424 | None:intergenic |
| TTAAGAAGTTGAGCAACTTC+AGG | 0.301199 | 1:+77481624 | None:intergenic |
| GGGTGGTTGGAGATTGAAAT+GGG | 0.384436 | 1:-77481352 | MsG0180004398.01.T01:CDS |
| TTGTTGAAGGAATAGAAGTT+AGG | 0.389505 | 1:-77481252 | MsG0180004398.01.T01:CDS |
| TAGATCTCTCAGCATTGCTT+GGG | 0.393802 | 1:-77482843 | MsG0180004398.01.T01:CDS |
| CTAGATCTCTCAGCATTGCT+TGG | 0.399764 | 1:-77482844 | MsG0180004398.01.T01:CDS |
| ATCTAAGCTAACCTAGAATC+AGG | 0.406679 | 1:+77482785 | None:intergenic |
| ATGATAAGCGCTATTGGAAC+TGG | 0.419916 | 1:-77482817 | MsG0180004398.01.T01:CDS |
| TAGTACTAAAATTGTCTGTT+TGG | 0.420764 | 1:-77481449 | MsG0180004398.01.T01:CDS |
| AAGAGTGGTCTCTTTGTTGA+AGG | 0.429530 | 1:-77481265 | MsG0180004398.01.T01:CDS |
| GTTGCTTAATGGTCTTACTT+AGG | 0.436928 | 1:+77481229 | None:intergenic |
| GGGGTGATGATAAGCGCTAT+TGG | 0.442255 | 1:-77482823 | MsG0180004398.01.T01:CDS |
| TTCAATTCAGGCTTAGAAGA+TGG | 0.449517 | 1:-77481325 | MsG0180004398.01.T01:CDS |
| TAAGAAGTTGAGCAACTTCA+GGG | 0.455579 | 1:+77481625 | None:intergenic |
| TGGGTGGTTGGAGATTGAAA+TGG | 0.464905 | 1:-77481353 | MsG0180004398.01.T01:CDS |
| CTCAACTTCTTAAAGTGTGG+TGG | 0.472753 | 1:-77481614 | MsG0180004398.01.T01:CDS |
| CGTCCTAGTGTGAGAAGCGA+TGG | 0.485861 | 1:-77481373 | MsG0180004398.01.T01:CDS |
| GTAGCTCCTTAACATTCATC+AGG | 0.499214 | 1:+77481296 | None:intergenic |
| AGACGTCCTGATGAATGTTA+AGG | 0.504428 | 1:-77481302 | MsG0180004398.01.T01:CDS |
| AGACAGTTCCGAGCATCAAA+AGG | 0.515262 | 1:-77482996 | MsG0180004398.01.T01:intron |
| AGGCAGCATGACAGAGCAGT+AGG | 0.538263 | 1:-77481403 | MsG0180004398.01.T01:CDS |
| CACCCATCGCTTCTCACACT+AGG | 0.543006 | 1:+77481370 | None:intergenic |
| TCTTCATCTTGGGATACCTA+AGG | 0.562627 | 1:-77483039 | None:intergenic |
| TTTGGATCCAAATGTGGAAG+TGG | 0.569537 | 1:-77481431 | MsG0180004398.01.T01:CDS |
| TGTGAGAAGCGATGGGTGGT+TGG | 0.576323 | 1:-77481365 | MsG0180004398.01.T01:CDS |
| CAAATGTGGAAGTGGAAGGT+AGG | 0.580778 | 1:-77481423 | MsG0180004398.01.T01:CDS |
| GATCCAAATGTGGAAGTGGA+AGG | 0.597012 | 1:-77481427 | MsG0180004398.01.T01:CDS |
| TTATCAGTTGGTGTCGAAGG+TGG | 0.605148 | 1:-77481478 | MsG0180004398.01.T01:intron |
| AGATCTCTCAGCATTGCTTG+GGG | 0.605794 | 1:-77482842 | MsG0180004398.01.T01:CDS |
| TTGCTCAACTTCTTAAAGTG+TGG | 0.607277 | 1:-77481617 | MsG0180004398.01.T01:CDS |
| TTGGGATACCTAAGGATGTG+TGG | 0.610104 | 1:-77483031 | MsG0180004398.01.T01:exon |
| GTGGTTGGAGATTGAAATGG+GGG | 0.620504 | 1:-77481350 | MsG0180004398.01.T01:CDS |
| GAGTTATCAGTTGGTGTCGA+AGG | 0.620810 | 1:-77481481 | MsG0180004398.01.T01:intron |
| TGTCTGTTTGGATCCAAATG+TGG | 0.625217 | 1:-77481437 | MsG0180004398.01.T01:CDS |
| GAGCTACATCTTTCGAAGAG+TGG | 0.627137 | 1:-77481280 | MsG0180004398.01.T01:CDS |
| GTCCTAGTGTGAGAAGCGAT+GGG | 0.643186 | 1:-77481372 | MsG0180004398.01.T01:CDS |
| GGTGGTTGGAGATTGAAATG+GGG | 0.648046 | 1:-77481351 | MsG0180004398.01.T01:CDS |
| CTAGTGTGAGAAGCGATGGG+TGG | 0.709944 | 1:-77481369 | MsG0180004398.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GGATAAAAAATTTAAAAATT+TGG | + | Chr1:77481904-77481923 | None:intergenic | 10.0% |
| !!! | AGTAAATAAAATAATGGAAT+GGG | + | Chr1:77482083-77482102 | None:intergenic | 15.0% |
| !! | CAATGAAAAATATATAGGAT+TGG | + | Chr1:77481871-77481890 | None:intergenic | 20.0% |
| !! | CTACTTTCTTATTATGATAT+AGG | + | Chr1:77482548-77482567 | None:intergenic | 20.0% |
| !! | GTACTGAGTAAATAAAATAA+TGG | + | Chr1:77482089-77482108 | None:intergenic | 20.0% |
| !! | TGATGCAATGAAAAATATAT+AGG | + | Chr1:77481876-77481895 | None:intergenic | 20.0% |
| !! | TTAAGTTAATCAAGACATAT+TGG | + | Chr1:77481559-77481578 | None:intergenic | 20.0% |
| !!! | CATAATCATAGTTTCTTTTT+TGG | - | Chr1:77481827-77481846 | MsG0180004398.01.T01:intron | 20.0% |
| !!! | GAGTAAATAAAATAATGGAA+TGG | + | Chr1:77482084-77482103 | None:intergenic | 20.0% |
| !!! | TTAAGATTTTTTGCTTAGAA+TGG | - | Chr1:77481629-77481648 | MsG0180004398.01.T01:CDS | 20.0% |
| ! | AAAAACAAATTGTGCAAAGT+CGG | + | Chr1:77482004-77482023 | None:intergenic | 25.0% |
| ! | AGCGTTTATAACTTATTAAC+TGG | - | Chr1:77482478-77482497 | MsG0180004398.01.T01:intron | 25.0% |
| ! | GCAAAAAATCTTAACTAACT+TGG | + | Chr1:77481623-77481642 | None:intergenic | 25.0% |
| ! | GCGTTTATAACTTATTAACT+GGG | - | Chr1:77482479-77482498 | MsG0180004398.01.T01:intron | 25.0% |
| ! | TAAGTTATAAACGCTGTTAT+AGG | + | Chr1:77482473-77482492 | None:intergenic | 25.0% |
| ! | TAGTACTAAAATTGTCTGTT+TGG | - | Chr1:77482823-77482842 | MsG0180004398.01.T01:CDS | 25.0% |
| ! | TGCAATGATTAGAATATACT+AGG | + | Chr1:77482607-77482626 | None:intergenic | 25.0% |
| ! | TTAACTAACTTGGTTCATAA+AGG | + | Chr1:77481613-77481632 | None:intergenic | 25.0% |
| ! | TTATAACTTATTAACTGGGT+AGG | - | Chr1:77482483-77482502 | MsG0180004398.01.T01:intron | 25.0% |
| ! | TTGTAAGGTAACAAACAAAT+TGG | + | Chr1:77481925-77481944 | None:intergenic | 25.0% |
| !! | GTTTAAAATGATTGATGCTT+GGG | - | Chr1:77482748-77482767 | MsG0180004398.01.T01:intron | 25.0% |
| !! | TAATAATACCTTTTGATGCT+CGG | + | Chr1:77481287-77481306 | None:intergenic | 25.0% |
| !! | TGTTTAAAATGATTGATGCT+TGG | - | Chr1:77482747-77482766 | MsG0180004398.01.T01:intron | 25.0% |
| !! | TTTAAAATGATTGATGCTTG+GGG | - | Chr1:77482749-77482768 | MsG0180004398.01.T01:intron | 25.0% |
| AACTTGGATGGAAAATAGAT+GGG | + | Chr1:77481770-77481789 | None:intergenic | 30.0% | |
| AAGTGAATTCCTAAGAAAAC+TGG | + | Chr1:77482362-77482381 | None:intergenic | 30.0% | |
| AGGAAAAGAAATAACAGCAA+AGG | + | Chr1:77482453-77482472 | None:intergenic | 30.0% | |
| ATAAGCTGCATATTGAGTAT+TGG | + | Chr1:77482723-77482742 | None:intergenic | 30.0% | |
| ATCAATATGAACTTGAACGA+AGG | + | Chr1:77482031-77482050 | None:intergenic | 30.0% | |
| CAAGAACATGTGTAACAATA+CGG | + | Chr1:77481976-77481995 | None:intergenic | 30.0% | |
| TAAGCTGCATATTGAGTATT+GGG | + | Chr1:77482722-77482741 | None:intergenic | 30.0% | |
| TATCTGCTCAGATATTTGAA+AGG | - | Chr1:77482200-77482219 | MsG0180004398.01.T01:intron | 30.0% | |
| TTAGAATGCTAATAAAGCCT+TGG | - | Chr1:77481349-77481368 | MsG0180004398.01.T01:CDS | 30.0% | |
| TTGTTGAAGGAATAGAAGTT+AGG | - | Chr1:77483020-77483039 | MsG0180004398.01.T01:exon | 30.0% | |
| ! | ATCTATTTTCCATCCAAGTT+GGG | - | Chr1:77481770-77481789 | MsG0180004398.01.T01:intron | 30.0% |
| ! | TTATGAAGCATTACAGATGA+AGG | + | Chr1:77481812-77481831 | None:intergenic | 30.0% |
| !! | AGACAATTTTAGTACTACTC+TGG | + | Chr1:77482820-77482839 | None:intergenic | 30.0% |
| !!! | TGTTTTAAGGCAACTTAGAA+TGG | - | Chr1:77481660-77481679 | MsG0180004398.01.T01:intron | 30.0% |
| AATAGAAGATCATAGCCATG+TGG | + | Chr1:77482226-77482245 | None:intergenic | 35.0% | |
| AATTCCTAAGAAAACTGGCT+TGG | + | Chr1:77482357-77482376 | None:intergenic | 35.0% | |
| ACAATACGGAGGCTTAAAAT+AGG | + | Chr1:77481962-77481981 | None:intergenic | 35.0% | |
| ACATCTAACAGTAGATTGCT+TGG | + | Chr1:77482397-77482416 | None:intergenic | 35.0% | |
| ATAGAAGTTAGGCCTAAGTA+AGG | - | Chr1:77483031-77483050 | MsG0180004398.01.T01:exon | 35.0% | |
| ATCTAAGCTAACCTAGAATC+AGG | + | Chr1:77481490-77481509 | None:intergenic | 35.0% | |
| ATGAGAGAAATCAGCAGTTT+AGG | + | Chr1:77481319-77481338 | None:intergenic | 35.0% | |
| CAACTTGGATGGAAAATAGA+TGG | + | Chr1:77481771-77481790 | None:intergenic | 35.0% | |
| GGATTAATATGCCTGATTCT+AGG | - | Chr1:77481476-77481495 | MsG0180004398.01.T01:intron | 35.0% | |
| GTTAATCAAGACATATTGGC+TGG | + | Chr1:77481555-77481574 | None:intergenic | 35.0% | |
| TAAGAAGTTGAGCAACTTCA+GGG | + | Chr1:77482650-77482669 | None:intergenic | 35.0% | |
| TAAGTTGCCTTAAAACACCA+TGG | + | Chr1:77481657-77481676 | None:intergenic | 35.0% | |
| TACTCAGTACTTCATCACTT+TGG | - | Chr1:77482099-77482118 | MsG0180004398.01.T01:intron | 35.0% | |
| TAGAAGTTAGGCCTAAGTAA+GGG | - | Chr1:77483032-77483051 | MsG0180004398.01.T01:exon | 35.0% | |
| TGAAAAATCCACACATCCTT+AGG | + | Chr1:77481252-77481271 | None:intergenic | 35.0% | |
| TTAAGAAGTTGAGCAACTTC+AGG | + | Chr1:77482651-77482670 | None:intergenic | 35.0% | |
| TTCAATTCAGGCTTAGAAGA+TGG | - | Chr1:77482947-77482966 | MsG0180004398.01.T01:intron | 35.0% | |
| TTGCTCAACTTCTTAAAGTG+TGG | - | Chr1:77482655-77482674 | MsG0180004398.01.T01:intron | 35.0% | |
| TTGGATATCTTGAAATGCAG+CGG | - | Chr1:77481368-77481387 | MsG0180004398.01.T01:CDS | 35.0% | |
| ! | AAGCTGCATATTGAGTATTG+GGG | + | Chr1:77482721-77482740 | None:intergenic | 35.0% |
| ! | CATCTATTTTCCATCCAAGT+TGG | - | Chr1:77481769-77481788 | MsG0180004398.01.T01:intron | 35.0% |
| ! | TTTAAGGCAACTTAGAATGG+CGG | - | Chr1:77481663-77481682 | MsG0180004398.01.T01:intron | 35.0% |
| ! | TTTGAGGAAGACTTTGAAGA+CGG | - | Chr1:77482135-77482154 | MsG0180004398.01.T01:intron | 35.0% |
| !! | AGGATGTGTGGATTTTTCAA+AGG | - | Chr1:77481253-77481272 | MsG0180004398.01.T01:CDS | 35.0% |
| AAGAGTGGTCTCTTTGTTGA+AGG | - | Chr1:77483007-77483026 | MsG0180004398.01.T01:CDS | 40.0% | |
| AGACGTCCTGATGAATGTTA+AGG | - | Chr1:77482970-77482989 | MsG0180004398.01.T01:intron | 40.0% | |
| ATGATAAGCGCTATTGGAAC+TGG | - | Chr1:77481455-77481474 | MsG0180004398.01.T01:CDS | 40.0% | |
| ATTAACTGGGTAGGTCACTA+AGG | - | Chr1:77482492-77482511 | MsG0180004398.01.T01:intron | 40.0% | |
| CAGATATTTGAAAGGCCACA+TGG | - | Chr1:77482208-77482227 | MsG0180004398.01.T01:intron | 40.0% | |
| CTCAACTTCTTAAAGTGTGG+TGG | - | Chr1:77482658-77482677 | MsG0180004398.01.T01:intron | 40.0% | |
| GAACATGTGTAACAATACGG+AGG | + | Chr1:77481973-77481992 | None:intergenic | 40.0% | |
| GAACTGCGTCATTAGTTGTA+AGG | + | Chr1:77481940-77481959 | None:intergenic | 40.0% | |
| GCATTACAGATGAAGGATCT+TGG | + | Chr1:77481805-77481824 | None:intergenic | 40.0% | |
| GCTGCATTTCAAGATATCCA+AGG | + | Chr1:77481369-77481388 | None:intergenic | 40.0% | |
| GTAGCTCCTTAACATTCATC+AGG | + | Chr1:77482979-77482998 | None:intergenic | 40.0% | |
| TAGATCTCTCAGCATTGCTT+GGG | - | Chr1:77481429-77481448 | MsG0180004398.01.T01:CDS | 40.0% | |
| TGTCTGTTTGGATCCAAATG+TGG | - | Chr1:77482835-77482854 | MsG0180004398.01.T01:CDS | 40.0% | |
| TGTGGTGGCTTGATATTAGT+GGG | - | Chr1:77482673-77482692 | MsG0180004398.01.T01:intron | 40.0% | |
| TTAACTGGGTAGGTCACTAA+GGG | - | Chr1:77482493-77482512 | MsG0180004398.01.T01:intron | 40.0% | |
| TTTGGATCCAAATGTGGAAG+TGG | - | Chr1:77482841-77482860 | MsG0180004398.01.T01:CDS | 40.0% | |
| ! | CTTACCAAGCCAGTTTTCTT+AGG | - | Chr1:77482350-77482369 | MsG0180004398.01.T01:intron | 40.0% |
| ! | GATTGGTTATCGCAGCAATT+AGG | + | Chr1:77481854-77481873 | None:intergenic | 40.0% |
| !! | GATGTTGATTTGTGCCATTG+TGG | - | Chr1:77482412-77482431 | MsG0180004398.01.T01:intron | 40.0% |
| AATTCACTCAGCCTCCACAA+TGG | + | Chr1:77482429-77482448 | None:intergenic | 45.0% | |
| ACACCAACTGATAACTCCAC+AGG | + | Chr1:77482788-77482807 | None:intergenic | 45.0% | |
| AGACAGTTCCGAGCATCAAA+AGG | - | Chr1:77481276-77481295 | MsG0180004398.01.T01:CDS | 45.0% | |
| AGATCTCTCAGCATTGCTTG+GGG | - | Chr1:77481430-77481449 | MsG0180004398.01.T01:CDS | 45.0% | |
| ATCCTGATGCTTAGCTGAAG+TGG | + | Chr1:77481714-77481733 | None:intergenic | 45.0% | |
| ATGTCCAGTGTCTACACATG+TGG | + | Chr1:77482307-77482326 | None:intergenic | 45.0% | |
| CAAATGTGGAAGTGGAAGGT+AGG | - | Chr1:77482849-77482868 | MsG0180004398.01.T01:CDS | 45.0% | |
| CTACCTTCCACTTCCACATT+TGG | + | Chr1:77482851-77482870 | None:intergenic | 45.0% | |
| CTAGATCTCTCAGCATTGCT+TGG | - | Chr1:77481428-77481447 | MsG0180004398.01.T01:CDS | 45.0% | |
| GAAATGGGGGAGTTCAATTC+AGG | - | Chr1:77482935-77482954 | MsG0180004398.01.T01:intron | 45.0% | |
| GAGCTACATCTTTCGAAGAG+TGG | - | Chr1:77482992-77483011 | MsG0180004398.01.T01:intron | 45.0% | |
| GATCCAAATGTGGAAGTGGA+AGG | - | Chr1:77482845-77482864 | MsG0180004398.01.T01:CDS | 45.0% | |
| GGGTGGTTGGAGATTGAAAT+GGG | - | Chr1:77482920-77482939 | MsG0180004398.01.T01:intron | 45.0% | |
| GGTGGTTGGAGATTGAAATG+GGG | - | Chr1:77482921-77482940 | MsG0180004398.01.T01:intron | 45.0% | |
| GTAAGATGTAGTGCATCTGC+AGG | + | Chr1:77482335-77482354 | None:intergenic | 45.0% | |
| GTCCTTTGCAAAAGCTGACT+AGG | - | Chr1:77482281-77482300 | MsG0180004398.01.T01:intron | 45.0% | |
| GTGGTTGGAGATTGAAATGG+GGG | - | Chr1:77482922-77482941 | MsG0180004398.01.T01:intron | 45.0% | |
| GTGTGGTGGCTTGATATTAG+TGG | - | Chr1:77482672-77482691 | MsG0180004398.01.T01:intron | 45.0% | |
| TCAGCTAAGCATCAGGATTC+AGG | - | Chr1:77481716-77481735 | MsG0180004398.01.T01:intron | 45.0% | |
| TGGGTGAAGACTGAATAGCA+TGG | + | Chr1:77481751-77481770 | None:intergenic | 45.0% | |
| TGGGTGGTTGGAGATTGAAA+TGG | - | Chr1:77482919-77482938 | MsG0180004398.01.T01:intron | 45.0% | |
| TGTCCTGTGGAGTTATCAGT+TGG | - | Chr1:77482782-77482801 | MsG0180004398.01.T01:intron | 45.0% | |
| ! | AATGGCGCCATGGTGTTTTA+AGG | - | Chr1:77481647-77481666 | MsG0180004398.01.T01:intron | 45.0% |
| ! | TTTTGCTTAGAATGGCGCCA+TGG | - | Chr1:77481637-77481656 | MsG0180004398.01.T01:intron | 45.0% |
| !! | GAGTATTGGGGACAAGCTAA+GGG | + | Chr1:77482709-77482728 | None:intergenic | 45.0% |
| !! | GAGTTATCAGTTGGTGTCGA+AGG | - | Chr1:77482791-77482810 | MsG0180004398.01.T01:intron | 45.0% |
| !! | GTTGATTTGTGCCATTGTGG+AGG | - | Chr1:77482415-77482434 | MsG0180004398.01.T01:intron | 45.0% |
| !! | TGAGTATTGGGGACAAGCTA+AGG | + | Chr1:77482710-77482729 | None:intergenic | 45.0% |
| !! | TGGACGTCAGTTAGTCTTTG+AGG | - | Chr1:77482119-77482138 | MsG0180004398.01.T01:intron | 45.0% |
| !! | TTATCAGTTGGTGTCGAAGG+TGG | - | Chr1:77482794-77482813 | MsG0180004398.01.T01:intron | 45.0% |
| !!! | TTGCAGTGCTACTTTTGAGC+AGG | - | Chr1:77482622-77482641 | MsG0180004398.01.T01:intron | 45.0% |
| ACTCTGCAGCTGCAAGTGTA+AGG | + | Chr1:77482263-77482282 | None:intergenic | 50.0% | |
| ATGCTTAGCTGAAGTGGTGG+TGG | + | Chr1:77481708-77481727 | None:intergenic | 50.0% | |
| ATGTAGTGCATCTGCAGGTG+TGG | + | Chr1:77482330-77482349 | None:intergenic | 50.0% | |
| CACCACTTCAGCTAAGCATC+AGG | - | Chr1:77481709-77481728 | MsG0180004398.01.T01:intron | 50.0% | |
| CTGATGCTTAGCTGAAGTGG+TGG | + | Chr1:77481711-77481730 | None:intergenic | 50.0% | |
| GGGATTTGAGAACTGTCCTG+TGG | - | Chr1:77482769-77482788 | MsG0180004398.01.T01:intron | 50.0% | |
| GGGGTGATGATAAGCGCTAT+TGG | - | Chr1:77481449-77481468 | MsG0180004398.01.T01:CDS | 50.0% | |
| GTCCTAGTGTGAGAAGCGAT+GGG | - | Chr1:77482900-77482919 | MsG0180004398.01.T01:intron | 50.0% | |
| TAGGCCACATGTGTAGACAC+TGG | - | Chr1:77482300-77482319 | MsG0180004398.01.T01:intron | 50.0% | |
| TGCAGCTGCAAGTGTAAGGA+TGG | + | Chr1:77482259-77482278 | None:intergenic | 50.0% | |
| TGCTTCAAGCCCAACTTGGA+TGG | + | Chr1:77481782-77481801 | None:intergenic | 50.0% | |
| ! | GGCCTAGTCAGCTTTTGCAA+AGG | + | Chr1:77482286-77482305 | None:intergenic | 50.0% |
| ! | TTGGTGCTTCAAGCCCAACT+TGG | + | Chr1:77481786-77481805 | None:intergenic | 50.0% |
| !! | GTAGGTCACTAAGGGTGTCA+AGG | - | Chr1:77482501-77482520 | MsG0180004398.01.T01:intron | 50.0% |
| AGGCAGCATGACAGAGCAGT+AGG | - | Chr1:77482869-77482888 | MsG0180004398.01.T01:CDS | 55.0% | |
| CACCCATCGCTTCTCACACT+AGG | + | Chr1:77482905-77482924 | None:intergenic | 55.0% | |
| CGTCCTAGTGTGAGAAGCGA+TGG | - | Chr1:77482899-77482918 | MsG0180004398.01.T01:intron | 55.0% | |
| CTAGTGTGAGAAGCGATGGG+TGG | - | Chr1:77482903-77482922 | MsG0180004398.01.T01:intron | 55.0% | |
| TGTGAGAAGCGATGGGTGGT+TGG | - | Chr1:77482907-77482926 | MsG0180004398.01.T01:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 77481243 | 77483051 | 77481243 | ID=MsG0180004398.01;Name=MsG0180004398.01 |
| Chr1 | mRNA | 77481243 | 77483051 | 77481243 | ID=MsG0180004398.01.T01;Parent=MsG0180004398.01;Name=MsG0180004398.01.T01;_AED=0.50;_eAED=0.50;_QI=13|0.66|0.5|1|1|1|4|0|149 |
| Chr1 | exon | 77481243 | 77481493 | 77481243 | ID=MsG0180004398.01.T01:exon:45135;Parent=MsG0180004398.01.T01 |
| Chr1 | exon | 77481604 | 77481650 | 77481604 | ID=MsG0180004398.01.T01:exon:45134;Parent=MsG0180004398.01.T01 |
| Chr1 | exon | 77482797 | 77482906 | 77482797 | ID=MsG0180004398.01.T01:exon:45133;Parent=MsG0180004398.01.T01 |
| Chr1 | exon | 77482997 | 77483051 | 77482997 | ID=MsG0180004398.01.T01:exon:45132;Parent=MsG0180004398.01.T01 |
| Chr1 | five_prime_UTR | 77483039 | 77483051 | 77483039 | ID=MsG0180004398.01.T01:five_prime_utr;Parent=MsG0180004398.01.T01 |
| Chr1 | CDS | 77482997 | 77483038 | 77482997 | ID=MsG0180004398.01.T01:cds;Parent=MsG0180004398.01.T01 |
| Chr1 | CDS | 77482797 | 77482906 | 77482797 | ID=MsG0180004398.01.T01:cds;Parent=MsG0180004398.01.T01 |
| Chr1 | CDS | 77481604 | 77481650 | 77481604 | ID=MsG0180004398.01.T01:cds;Parent=MsG0180004398.01.T01 |
| Chr1 | CDS | 77481243 | 77481493 | 77481243 | ID=MsG0180004398.01.T01:cds;Parent=MsG0180004398.01.T01 |
| Gene Sequence |
| Protein sequence |
