AlfalfaGEDB | MsG0780040070.01

M. sativa cultivar ZhongmuNo.1 / MsG0780040070.01

KEGG: K00670
GO: -
PFAM: PF00583

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780040070.01.T01	AES80729.1	98.99	198	2	0	1	198	1	198	4.94E-143	406

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780040070.01.T01	O80438	85.443	158	23	0	16	173	11	168	2.51E-101	293

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780040070.01.T01	G7KXA5	98.990	198	2	0	1	198	1	198	2.36e-143	406

TFs/TRs:

Gene ID	Type	Classification
MsG0780040070.01.T01	TR	GNAT

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048197.01	MsG0780040070.01	0.815053	1.125564e-51	7.678648e-49
MsG0080048687.01	MsG0780040070.01	0.831890	1.291364e-55	1.420472e-52
MsG0080048784.01	MsG0780040070.01	0.814867	1.237708e-51	8.401307e-49
MsG0080048968.01	MsG0780040070.01	0.820007	8.609179e-53	6.731345e-50
MsG0080049135.01	MsG0780040070.01	0.816877	4.409560e-52	3.162440e-49
MsG0180000318.01	MsG0780040070.01	-0.803979	2.691251e-49	1.371428e-46
MsG0180000339.01	MsG0780040070.01	0.810351	1.203601e-50	7.238393e-48
MsG0180000384.01	MsG0780040070.01	0.813924	2.000567e-51	1.323760e-48
MsG0180000611.01	MsG0780040070.01	0.858811	6.374567e-63	1.647590e-59
MsG0180001260.01	MsG0780040070.01	0.804063	2.586244e-49	1.320742e-46
MsG0180002547.01	MsG0780040070.01	0.834801	2.429471e-56	2.914331e-53
MsG0180003651.01	MsG0780040070.01	0.805393	1.364282e-49	7.209303e-47
MsG0180003793.01	MsG0780040070.01	0.845235	4.607606e-59	7.628613e-56
MsG0180004009.01	MsG0780040070.01	0.817451	3.274798e-52	2.385869e-49
MsG0180004128.01	MsG0780040070.01	0.857565	1.496386e-62	3.709115e-59
MsG0180004130.01	MsG0780040070.01	0.834904	2.288278e-56	2.753686e-53
MsG0180004854.01	MsG0780040070.01	0.805193	1.501987e-49	7.896453e-47
MsG0180004861.01	MsG0780040070.01	0.834172	3.494323e-56	4.113278e-53
MsG0180005268.01	MsG0780040070.01	0.813901	2.023811e-51	1.338358e-48
MsG0280010776.01	MsG0780040070.01	0.843184	1.637794e-58	2.541823e-55
MsG0280010801.01	MsG0780040070.01	0.835257	1.864586e-56	2.267915e-53
MsG0380011614.01	MsG0780040070.01	0.837973	3.787955e-57	5.002576e-54
MsG0380011747.01	MsG0780040070.01	0.833038	6.709889e-56	7.635597e-53
MsG0380011927.01	MsG0780040070.01	0.836925	7.030271e-57	8.990288e-54
MsG0380012073.01	MsG0780040070.01	0.820366	7.124228e-53	5.625899e-50
MsG0380013085.01	MsG0780040070.01	0.827094	1.891131e-54	1.807445e-51
MsG0380014175.01	MsG0780040070.01	0.810574	1.077309e-50	6.517340e-48
MsG0680031000.01	MsG0780040070.01	0.800744	1.248441e-48	5.858260e-46
MsG0680031507.01	MsG0780040070.01	0.804974	1.669229e-49	8.726787e-47
MsG0680031828.01	MsG0780040070.01	0.801040	1.086227e-48	5.135875e-46
MsG0680035577.01	MsG0780040070.01	0.813377	2.639214e-51	1.720742e-48
MsG0480018477.01	MsG0780040070.01	0.805675	1.190700e-49	6.337885e-47
MsG0480019380.01	MsG0780040070.01	0.833306	5.752652e-56	6.599044e-53
MsG0480021006.01	MsG0780040070.01	0.812380	4.365630e-51	2.771441e-48
MsG0480021077.01	MsG0780040070.01	-0.800302	1.536272e-48	7.128901e-46
MsG0480021706.01	MsG0780040070.01	0.816996	4.146070e-52	2.983230e-49
MsG0480021832.01	MsG0780040070.01	0.817689	2.895479e-52	2.123158e-49
MsG0480022672.01	MsG0780040070.01	0.824039	1.001770e-53	8.772437e-51
MsG0480022780.01	MsG0780040070.01	0.820736	5.857669e-53	4.673269e-50
MsG0480022960.01	MsG0780040070.01	0.849591	2.931742e-60	5.585012e-57
MsG0480023149.01	MsG0780040070.01	0.813444	2.551553e-51	1.666626e-48
MsG0480023221.01	MsG0780040070.01	0.847084	1.446300e-59	2.541887e-56
MsG0480023240.01	MsG0780040070.01	0.808750	2.656303e-50	1.531207e-47
MsG0480023387.01	MsG0780040070.01	0.850234	1.936986e-60	3.769235e-57
MsG0480023396.01	MsG0780040070.01	0.815260	1.012442e-51	6.946077e-49
MsG0480023559.01	MsG0780040070.01	0.818544	1.854887e-52	1.392544e-49
MsG0580024084.01	MsG0780040070.01	0.845161	4.825763e-59	7.970569e-56
MsG0580024191.01	MsG0780040070.01	0.806044	9.959720e-50	5.351807e-47
MsG0580024619.01	MsG0780040070.01	0.824466	7.951283e-54	7.048131e-51
MsG0580025268.01	MsG0780040070.01	0.841526	4.503563e-58	6.635700e-55
MsG0580025439.01	MsG0780040070.01	0.804786	1.827719e-49	9.509080e-47
MsG0380015118.01	MsG0780040070.01	0.810646	1.039516e-50	6.300858e-48
MsG0380015220.01	MsG0780040070.01	0.800073	1.710426e-48	7.890643e-46
MsG0380015435.01	MsG0780040070.01	0.808123	3.614924e-50	2.049868e-47
MsG0380015598.01	MsG0780040070.01	-0.826865	2.145517e-54	2.036801e-51
MsG0380015818.01	MsG0780040070.01	0.819986	8.706839e-53	6.803627e-50
MsG0380016290.01	MsG0780040070.01	0.863236	2.875965e-64	8.657930e-61
MsG0380016636.01	MsG0780040070.01	0.816073	6.674129e-52	4.682329e-49
MsG0380017511.01	MsG0780040070.01	0.818217	2.200070e-52	1.636753e-49
MsG0380018033.01	MsG0780040070.01	0.862045	6.688581e-64	1.932075e-60
MsG0480018235.01	MsG0780040070.01	0.804191	2.431871e-49	1.245900e-46
MsG0580028597.01	MsG0780040070.01	0.850717	1.417371e-60	2.801818e-57
MsG0580029132.01	MsG0780040070.01	0.809774	1.602298e-50	9.492351e-48
MsG0580029283.01	MsG0780040070.01	0.807924	3.985231e-50	2.247911e-47
MsG0580029370.01	MsG0780040070.01	0.815924	7.204160e-52	5.033268e-49
MsG0580030003.01	MsG0780040070.01	0.811094	8.313425e-51	5.099652e-48
MsG0280006545.01	MsG0780040070.01	0.815722	7.993652e-52	5.554550e-49
MsG0280006852.01	MsG0780040070.01	0.818901	1.538585e-52	1.166599e-49
MsG0280006993.01	MsG0780040070.01	0.822113	2.817611e-53	2.336510e-50
MsG0280007440.01	MsG0780040070.01	0.867345	1.465387e-65	5.099538e-62
MsG0280007847.01	MsG0780040070.01	0.844256	8.459898e-59	1.357908e-55
MsG0280008118.01	MsG0780040070.01	0.857126	2.018761e-62	4.930480e-59
MsG0280009141.01	MsG0780040070.01	0.839296	1.724937e-57	2.371674e-54
MsG0280009575.01	MsG0780040070.01	0.865550	5.442571e-65	1.777885e-61
MsG0680035854.01	MsG0780040070.01	0.801585	8.399865e-49	4.026245e-46
MsG0680035877.01	MsG0780040070.01	0.805375	1.376187e-49	7.268953e-47
MsG0680035888.01	MsG0780040070.01	0.826924	2.076756e-54	1.975156e-51
MsG0780036240.01	MsG0780040070.01	0.833852	4.202023e-56	4.900143e-53
MsG0780038400.01	MsG0780040070.01	0.824651	7.191947e-54	6.410208e-51
MsG0780038587.01	MsG0780040070.01	0.805278	1.442101e-49	7.597873e-47
MsG0780038892.01	MsG0780040070.01	0.801437	9.010168e-49	4.302756e-46
MsG0780039340.01	MsG0780040070.01	0.833645	4.733545e-56	5.485083e-53
MsG0780039643.01	MsG0780040070.01	0.816918	4.316892e-52	3.099283e-49
MsG0780039828.01	MsG0780040070.01	0.807614	4.637664e-50	2.594836e-47
MsG0780039848.01	MsG0780040070.01	0.825684	4.099617e-54	3.763076e-51
MsG0780040070.01	MsG0780040110.01	0.801176	1.018839e-48	4.833570e-46
MsG0780040070.01	MsG0780040424.01	0.805865	1.086062e-49	5.809423e-47
MsG0780040070.01	MsG0780040569.01	0.854307	1.342757e-61	2.985949e-58
MsG0780040070.01	MsG0780040718.01	0.826443	2.705260e-54	2.537456e-51
MsG0780040070.01	MsG0780041006.01	0.806835	6.783537e-50	3.719615e-47
MsG0780040070.01	MsG0780041223.01	0.860464	2.029116e-63	5.551503e-60
MsG0780040070.01	MsG0780041258.01	0.846739	1.797450e-59	3.124161e-56
MsG0780040070.01	MsG0780041435.01	0.829318	5.503629e-55	5.614136e-52
MsG0780040070.01	MsG0880042033.01	0.856651	2.785164e-62	6.694235e-59
MsG0780040070.01	MsG0880042399.01	-0.800829	1.199191e-48	5.639441e-46
MsG0780040070.01	MsG0880042795.01	0.815297	9.937243e-52	6.824663e-49
MsG0780040070.01	MsG0880042978.01	0.800137	1.659726e-48	7.669291e-46
MsG0780040070.01	MsG0880042991.01	0.825615	4.257011e-54	3.899825e-51
MsG0780040070.01	MsG0880045656.01	0.858641	7.163675e-63	1.840830e-59
MsG0780040070.01	MsG0880045684.01	0.832927	7.149455e-56	8.108039e-53
MsG0780040070.01	MsG0880046068.01	0.821168	4.659022e-53	3.762056e-50
MsG0780040070.01	MsG0880046074.01	0.800896	1.162138e-48	5.474766e-46
MsG0780040070.01	MsG0880046177.01	0.810700	1.011865e-50	6.142301e-48

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780040070.01.T01	MTR_7g084140	98.990	198	2	0	1	198	1	198	5.98e-147	406
MsG0780040070.01.T01	MTR_3g034200	32.117	137	90	3	43	176	23	159	2.45e-13	65.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780040070.01.T01	AT2G38130	85.443	158	23	0	16	173	11	168	2.56e-102	293
MsG0780040070.01.T01	AT2G38130	85.443	158	23	0	16	173	11	168	2.56e-102	293

Find 53 sgRNAs with CRISPR-Local

Find 194 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATGGCCGCCTTGGCTTTATT+AGG	0.293449	7:-72724445	MsG0780040070.01.T01:CDS
TGGCCGCCTTGGCTTTATTA+GGG	0.308261	7:-72724444	MsG0780040070.01.T01:CDS
GATTTCTGTTTCGTCTTTGT+TGG	0.315027	7:+72727455	None:intergenic
GGGCACGGTGGTTTGTAAAA+TGG	0.322086	7:-72727133	MsG0780040070.01.T01:CDS
TCTAGAGGTGCGTGCAAGTC+TGG	0.341191	7:+72724353	None:intergenic
GGCACGGTGGTTTGTAAAAT+GGG	0.366067	7:-72727132	MsG0780040070.01.T01:CDS
GAAGCAGAAGTCACAAATAA+AGG	0.367029	7:-72724482	MsG0780040070.01.T01:CDS
CTTGCTCTGTATGGCCGCCT+TGG	0.385195	7:-72724455	MsG0780040070.01.T01:CDS
TATAAACTGATGCTATGTTA+TGG	0.407364	7:-72724207	MsG0780040070.01.T01:three_prime_UTR
ATCGCTACTTCGTCTATCTA+TGG	0.412371	7:-72727311	MsG0780040070.01.T01:CDS
ATTTCTGTTTCGTCTTTGTT+GGG	0.419367	7:+72727456	None:intergenic
CTAGACTCACCGGATAAATA+CGG	0.441585	7:-72724335	MsG0780040070.01.T01:CDS
TTAAAGTACATAATCATGAA+TGG	0.452623	7:+72724260	None:intergenic
CGCTGAGTTCTTCGTCGACA+AGG	0.454965	7:+72727355	None:intergenic
CAGCCACAGAACTTGTTACT+AGG	0.457121	7:-72726617	MsG0780040070.01.T01:CDS
CGATAGGTGAAGATGGAGTA+AGG	0.474230	7:+72727330	None:intergenic
ATGTGGCTCCCGTATTTATC+CGG	0.481987	7:+72724326	None:intergenic
AAAGGAGCACTTGCTCTGTA+TGG	0.485924	7:-72724464	MsG0780040070.01.T01:CDS
ATCAAAGTGATGATGGAATC+TGG	0.488662	7:-72726591	MsG0780040070.01.T01:CDS
TAGGTCTATCAAAGTGATGA+TGG	0.496415	7:-72726598	MsG0780040070.01.T01:CDS
CCCTACAGAGGAAGAGGCAT+TGG	0.499482	7:-72727057	MsG0780040070.01.T01:intron
GAAGTAGCGATAGGTGAAGA+TGG	0.509096	7:+72727323	None:intergenic
ATCAATCCCTACAGAGGAAG+AGG	0.512446	7:-72727063	MsG0780040070.01.T01:CDS
CGAGGAACAAGAAGAAGACA+TGG	0.521960	7:-72727484	MsG0780040070.01.T01:exon
CCAATGCCTCTTCCTCTGTA+GGG	0.528181	7:+72727057	None:intergenic
ACCAATGCCTCTTCCTCTGT+AGG	0.550157	7:+72727056	None:intergenic
TTTCATAAGGGTAAATGTGT+GGG	0.560965	7:-72727153	MsG0780040070.01.T01:CDS
CAAGGTTCATGATGAGAGGT+AGG	0.571066	7:+72727373	None:intergenic
TATACATTAACAGGTTACAT+TGG	0.574035	7:-72724504	MsG0780040070.01.T01:intron
GTAGCTGATGTATTCAATCT+CGG	0.580445	7:+72727410	None:intergenic
TAGACTCACCGGATAAATAC+GGG	0.590980	7:-72724334	MsG0780040070.01.T01:CDS
GCACGCACCTCTAGACTCAC+CGG	0.601943	7:-72724345	MsG0780040070.01.T01:CDS
TAAGGGTAAATGTGTGGGCA+CGG	0.602307	7:-72727148	MsG0780040070.01.T01:CDS
CGCCACGATCACTATGCATG+TGG	0.608007	7:+72724309	None:intergenic
GAGATTGAATACATCAGCTA+CGG	0.624186	7:-72727408	MsG0780040070.01.T01:CDS
TATTTATCCGGTGAGTCTAG+AGG	0.626348	7:+72724338	None:intergenic
GGTGCGTGCAAGTCTGGACG+AGG	0.630380	7:+72724359	None:intergenic
GAGGAAATAAAAGTTTAAGA+CGG	0.630576	7:+72724378	None:intergenic
GCTTAGCCCTAATAAAGCCA+AGG	0.631068	7:+72724438	None:intergenic
TAGATAGACGAAGTAGCGAT+AGG	0.633007	7:+72727314	None:intergenic
AGCCACATGCATAGTGATCG+TGG	0.635530	7:-72724311	MsG0780040070.01.T01:CDS
TCGACAAGGTTCATGATGAG+AGG	0.638163	7:+72727369	None:intergenic
GTTGTTATCAATCCCTACAG+AGG	0.638930	7:-72727069	MsG0780040070.01.T01:CDS
CACGGTGGTTTGTAAAATGG+GGG	0.647644	7:-72727130	MsG0780040070.01.T01:CDS
GCACGGTGGTTTGTAAAATG+GGG	0.655026	7:-72727131	MsG0780040070.01.T01:CDS
ATTGAATACATCAGCTACGG+CGG	0.665233	7:-72727405	MsG0780040070.01.T01:CDS
AGACCTAGTAACAAGTTCTG+TGG	0.674745	7:+72726614	None:intergenic
GGTACCAGAAAAGAAAGATG+AGG	0.680873	7:+72727288	None:intergenic
GGGTAAATGTGTGGGCACGG+TGG	0.700892	7:-72727145	MsG0780040070.01.T01:CDS
TTGGCTTTATTAGGGCTAAG+CGG	0.719008	7:-72724436	MsG0780040070.01.T01:CDS
AAAACCGAAGAACATAAACG+AGG	0.729840	7:-72727502	None:intergenic
GATGGAATCTGGTTGTGACG+AGG	0.743372	7:-72726580	MsG0780040070.01.T01:intron
TAGCCCTAATAAAGCCAAGG+CGG	0.755354	7:+72724441	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATATTCAACATTATAAAAT+AGG	+	Chr7:72727042-72727061	None:intergenic	10.0%
!!!	TTAACTTTTTTATTTTCATT+TGG	-	Chr7:72724650-72724669	MsG0780040070.01.T01:intron	10.0%
!!	TAATAAATCAAAGTGATTAA+CGG	+	Chr7:72724435-72724454	None:intergenic	15.0%
!!!	AACAAATTATTTTCACATTT+AGG	-	Chr7:72725584-72725603	MsG0780040070.01.T01:intron	15.0%
!!!	AATGATTTTTTTTGCAAAAT+GGG	+	Chr7:72726437-72726456	None:intergenic	15.0%
!!!	TAAATTGTGTTTAGATTTTT+TGG	-	Chr7:72727076-72727095	MsG0780040070.01.T01:CDS	15.0%
!!!	TTATTTTCATTTGGTATAAT+GGG	-	Chr7:72724659-72724678	MsG0780040070.01.T01:intron	15.0%
!!!	TTTATTTTCATTTGGTATAA+TGG	-	Chr7:72724658-72724677	MsG0780040070.01.T01:intron	15.0%
!!!	TTTTTTTATACTTATTAGCT+GGG	-	Chr7:72725624-72725643	MsG0780040070.01.T01:intron	15.0%
!!!	TTTTTTTTATACTTATTAGC+TGG	-	Chr7:72725623-72725642	MsG0780040070.01.T01:intron	15.0%
!!	AAAAGAACTTATACTTACAT+AGG	-	Chr7:72724862-72724881	MsG0780040070.01.T01:intron	20.0%
!!	AAATATTATAGTCTCACATT+TGG	+	Chr7:72725974-72725993	None:intergenic	20.0%
!!	ACAATTAAAGTTCAAATGTT+TGG	-	Chr7:72726520-72726539	MsG0780040070.01.T01:intron	20.0%
!!	CAATTAAAGTTCAAATGTTT+GGG	-	Chr7:72726521-72726540	MsG0780040070.01.T01:intron	20.0%
!!	GAAAATGTTATTAAGATAAG+TGG	+	Chr7:72726065-72726084	None:intergenic	20.0%
!!	GTATATTTGGATTGTATTAT+TGG	-	Chr7:72724681-72724700	MsG0780040070.01.T01:intron	20.0%
!!	TCAAACAACACTATAATATT+TGG	-	Chr7:72725474-72725493	MsG0780040070.01.T01:intron	20.0%
!!	TTAAAGTACATAATCATGAA+TGG	+	Chr7:72727390-72727409	None:intergenic	20.0%
!!	TTGAATATTTACTAGACATA+TGG	-	Chr7:72727053-72727072	MsG0780040070.01.T01:intron	20.0%
!!!	AGTGTAATTTTTCATTGAAA+AGG	+	Chr7:72726175-72726194	None:intergenic	20.0%
!!!	CAATGATTTTTTTTGCAAAA+TGG	+	Chr7:72726438-72726457	None:intergenic	20.0%
!!!	CATAACAAGTTTAAAATCAA+CGG	+	Chr7:72726842-72726861	None:intergenic	20.0%
!!!	TTAAGTTGTTTATACAAACA+AGG	-	Chr7:72724922-72724941	MsG0780040070.01.T01:intron	20.0%
!!!	TTCTTTCTTTGTTTTGTTTT+AGG	-	Chr7:72724469-72724488	MsG0780040070.01.T01:CDS	20.0%
!!!	TTTTCACCTTTTAATTATCT+GGG	-	Chr7:72724394-72724413	MsG0780040070.01.T01:CDS	20.0%
!!!	TTTTGCAAAAAAAATCATTG+CGG	-	Chr7:72726438-72726457	MsG0780040070.01.T01:intron	20.0%
!!!	TTTTTTATACTTATTAGCTG+GGG	-	Chr7:72725625-72725644	MsG0780040070.01.T01:intron	20.0%
!	AAAAAACAAGCAAAAGCTAA+AGG	+	Chr7:72725006-72725025	None:intergenic	25.0%
!	AAATACTTCAATTATGTTGG+TGG	-	Chr7:72727005-72727024	MsG0780040070.01.T01:intron	25.0%
!	AAATAGTCTATTATTAGACG+CGG	+	Chr7:72725814-72725833	None:intergenic	25.0%
!	AAATGACCCAGATAATTAAA+AGG	+	Chr7:72724403-72724422	None:intergenic	25.0%
!	AAATTCACAAATCACATGAT+CGG	+	Chr7:72726891-72726910	None:intergenic	25.0%
!	AACTCTTTATAATCACGTAT+AGG	+	Chr7:72724948-72724967	None:intergenic	25.0%
!	AAGGATAATCAAATAGTTAG+AGG	+	Chr7:72725884-72725903	None:intergenic	25.0%
!	AATCATAAGCGCTTATTTAT+AGG	-	Chr7:72725128-72725147	MsG0780040070.01.T01:intron	25.0%
!	ATCATAAGCGCTTATTTATA+GGG	-	Chr7:72725129-72725148	MsG0780040070.01.T01:intron	25.0%
!	ATGTTGTATAGATTGTATAC+AGG	+	Chr7:72726132-72726151	None:intergenic	25.0%
!	GAGGAAATAAAAGTTTAAGA+CGG	+	Chr7:72727272-72727291	None:intergenic	25.0%
!	GTTCAAAGTTAAACACTTAT+AGG	-	Chr7:72727104-72727123	MsG0780040070.01.T01:CDS	25.0%
!	TAGCACTTAAATAAGGTAAA+CGG	+	Chr7:72725373-72725392	None:intergenic	25.0%
!	TATAAACTGATGCTATGTTA+TGG	-	Chr7:72727440-72727459	MsG0780040070.01.T01:CDS	25.0%
!	TATACATTAACAGGTTACAT+TGG	-	Chr7:72727143-72727162	MsG0780040070.01.T01:CDS	25.0%
!	TGTTGTATAGATTGTATACA+GGG	+	Chr7:72726131-72726150	None:intergenic	25.0%
!	TTCATCATTGTTCAACTTAT+TGG	-	Chr7:72726974-72726993	MsG0780040070.01.T01:intron	25.0%
!!	AATAAGTTGAAAACAGCTTA+TGG	+	Chr7:72724762-72724781	None:intergenic	25.0%
!!	CTTCTTGTTTATACATTAAC+AGG	-	Chr7:72727134-72727153	MsG0780040070.01.T01:CDS	25.0%
!!!	CTTTTCACCTTTTAATTATC+TGG	-	Chr7:72724393-72724412	MsG0780040070.01.T01:CDS	25.0%
!!!	CTTTTTCACTACTATTTGAA+TGG	-	Chr7:72727234-72727253	MsG0780040070.01.T01:intron	25.0%
!!!	TTGTTTTAGGCTTTTCATAA+GGG	-	Chr7:72724482-72724501	MsG0780040070.01.T01:CDS	25.0%
!!!	TTTGGTATAATGGGTATATT+TGG	-	Chr7:72724668-72724687	MsG0780040070.01.T01:intron	25.0%
!!!	TTTGTTTTAGGCTTTTCATA+AGG	-	Chr7:72724481-72724500	MsG0780040070.01.T01:CDS	25.0%
	AAAAATGCTTGTGTAAACTC+GGG	-	Chr7:72726648-72726667	MsG0780040070.01.T01:intron	30.0%
	AACAAAGATAGATAAGACGA+AGG	+	Chr7:72725910-72725929	None:intergenic	30.0%
	AGACTGTCTATTAAAGCTTA+TGG	-	Chr7:72724718-72724737	MsG0780040070.01.T01:intron	30.0%
	AGGTGAAAAGATGAAAGATT+TGG	+	Chr7:72724383-72724402	None:intergenic	30.0%
	AGTCATCGTATGAAAACATA+GGG	+	Chr7:72726611-72726630	None:intergenic	30.0%
	ATAGATAAGACGAAGGAATA+AGG	+	Chr7:72725903-72725922	None:intergenic	30.0%
	ATTTCTGTTTCGTCTTTGTT+GGG	+	Chr7:72724194-72724213	None:intergenic	30.0%
	CAAAAATGCTTGTGTAAACT+CGG	-	Chr7:72726647-72726666	MsG0780040070.01.T01:intron	30.0%
	CAAAACTACTACAGATTGAA+GGG	+	Chr7:72726796-72726815	None:intergenic	30.0%
	CACAAAAAATCTTTGCAATG+AGG	-	Chr7:72726679-72726698	MsG0780040070.01.T01:intron	30.0%
	CCTATCAAACAAAATAACAG+GGG	+	Chr7:72726245-72726264	None:intergenic	30.0%
	GCCTATCAAACAAAATAACA+GGG	+	Chr7:72726246-72726265	None:intergenic	30.0%
	GCGAAATACTTCAATTATGT+TGG	-	Chr7:72727002-72727021	MsG0780040070.01.T01:intron	30.0%
	TACTACATCTCTTAGTAAAC+TGG	-	Chr7:72726333-72726352	MsG0780040070.01.T01:intron	30.0%
	TCAAAACTACTACAGATTGA+AGG	+	Chr7:72726797-72726816	None:intergenic	30.0%
	TGTCTATTAAAGCTTATGGA+AGG	-	Chr7:72724722-72724741	MsG0780040070.01.T01:intron	30.0%
	TTAAATTGTATGTTTCCCCT+AGG	-	Chr7:72725649-72725668	MsG0780040070.01.T01:intron	30.0%
	TTTATTCGTACAAACTGACA+TGG	+	Chr7:72725408-72725427	None:intergenic	30.0%
	TTTCATAAGGGTAAATGTGT+GGG	-	Chr7:72724494-72724513	MsG0780040070.01.T01:CDS	30.0%
!	AAACCAAAGTGAAACTCTTT+TGG	+	Chr7:72726493-72726512	None:intergenic	30.0%
!	GTCTTATCTATCTTTGTTGT+TGG	-	Chr7:72725912-72725931	MsG0780040070.01.T01:intron	30.0%
!	TCTATTACAAGTTGACTTTC+CGG	-	Chr7:72726091-72726110	MsG0780040070.01.T01:intron	30.0%
!	TTTTCATAAGGGTAAATGTG+TGG	-	Chr7:72724493-72724512	MsG0780040070.01.T01:CDS	30.0%
!!	TTACACTTAAAGCATTGTTC+CGG	-	Chr7:72726188-72726207	MsG0780040070.01.T01:intron	30.0%
!!!	AAAGCTTTTAGTTTTGGTGT+TGG	-	Chr7:72725340-72725359	MsG0780040070.01.T01:intron	30.0%
!!!	ATCACTGTTTTTGTCTAGTA+TGG	-	Chr7:72727468-72727487	MsG0780040070.01.T01:CDS	30.0%
!!!	GTAGAGAAAGCTTTTAGTTT+TGG	-	Chr7:72725334-72725353	MsG0780040070.01.T01:intron	30.0%
	AAAATCATTGCGGAACCAAT+TGG	-	Chr7:72726448-72726467	MsG0780040070.01.T01:intron	35.0%
	AAATAGTTAGAGGTAGAGAG+AGG	+	Chr7:72725874-72725893	None:intergenic	35.0%
	ACATTGCATATAACCTTGAG+TGG	-	Chr7:72726148-72726167	MsG0780040070.01.T01:intron	35.0%
	AGAGTCAACGAGATACTAAT+GGG	+	Chr7:72725999-72726018	None:intergenic	35.0%
	ATGCATCAACTTATCAGAGT+TGG	+	Chr7:72726723-72726742	None:intergenic	35.0%
	CAAACCAAAATCTCAGAAAC+GGG	-	Chr7:72725672-72725691	MsG0780040070.01.T01:intron	35.0%
	CAGTCATCGTATGAAAACAT+AGG	+	Chr7:72726612-72726631	None:intergenic	35.0%
	CGCCTATCAAACAAAATAAC+AGG	+	Chr7:72726247-72726266	None:intergenic	35.0%
	CTTCCAAAAGAGTTTCACTT+TGG	-	Chr7:72726487-72726506	MsG0780040070.01.T01:intron	35.0%
	GAAGCAGAAGTCACAAATAA+AGG	-	Chr7:72727165-72727184	MsG0780040070.01.T01:intron	35.0%
	GAGATTGAATACATCAGCTA+CGG	-	Chr7:72724239-72724258	MsG0780040070.01.T01:three_prime_UTR	35.0%
	GATACAACTAGACATAGACA+TGG	+	Chr7:72725291-72725310	None:intergenic	35.0%
	GATTATTGAGCAGATCCAAT+TGG	+	Chr7:72726466-72726485	None:intergenic	35.0%
	GATTTCTGTTTCGTCTTTGT+TGG	+	Chr7:72724195-72724214	None:intergenic	35.0%
	GCAAACCAAAATCTCAGAAA+CGG	-	Chr7:72725671-72725690	MsG0780040070.01.T01:intron	35.0%
	GTAGCTGATGTATTCAATCT+CGG	+	Chr7:72724240-72724259	None:intergenic	35.0%
	TACAAACTGACATGGAACTA+TGG	+	Chr7:72725400-72725419	None:intergenic	35.0%
	TACCATCACAACTCAATTGA+CGG	+	Chr7:72726916-72726935	None:intergenic	35.0%
	TAGGTCTATCAAAGTGATGA+TGG	-	Chr7:72725049-72725068	MsG0780040070.01.T01:intron	35.0%
	TGAAGCTAGATTAAGCTTTG+TGG	+	Chr7:72726750-72726769	None:intergenic	35.0%
	TGAGTTGTGATGGTATGTTT+GGG	-	Chr7:72726921-72726940	MsG0780040070.01.T01:intron	35.0%
	TGCATCAACTTATCAGAGTT+GGG	+	Chr7:72726722-72726741	None:intergenic	35.0%
	TGGAAGCTAGCACTTAAATA+AGG	+	Chr7:72725380-72725399	None:intergenic	35.0%
!	TTGAGTTGTGATGGTATGTT+TGG	-	Chr7:72726920-72726939	MsG0780040070.01.T01:intron	35.0%
!!	ATCAAAGTGATGATGGAATC+TGG	-	Chr7:72725056-72725075	MsG0780040070.01.T01:intron	35.0%
!!	TATTTTGTTTGATAGGCGCA+AGG	-	Chr7:72726249-72726268	MsG0780040070.01.T01:intron	35.0%
!!	TTTGTTGTTGGTGTTTCTGT+GGG	-	Chr7:72725924-72725943	MsG0780040070.01.T01:intron	35.0%
!!!	ACTGGCTTTTCATATAGTAC+TGG	-	Chr7:72726351-72726370	MsG0780040070.01.T01:intron	35.0%
!!!	ATTGAGAGTATTTTTCCACC+AGG	-	Chr7:72725731-72725750	MsG0780040070.01.T01:intron	35.0%
!!!	CCCCTGTTATTTTGTTTGAT+AGG	-	Chr7:72726242-72726261	MsG0780040070.01.T01:intron	35.0%
!!!	CTGTTTTTGTCTAGTATGGT+AGG	-	Chr7:72727472-72727491	MsG0780040070.01.T01:exon	35.0%
!!!	CTTTTAGTTTTGGTGTTGGT+TGG	-	Chr7:72725344-72725363	MsG0780040070.01.T01:intron	35.0%
	ACTACAGATTGAAGGGTAGT+GGG	+	Chr7:72726789-72726808	None:intergenic	40.0%
	AGACAAGATAGGATCAAGGA+CGG	+	Chr7:72726035-72726054	None:intergenic	40.0%
	AGACCTACAGAGACAAACTT+TGG	+	Chr7:72726409-72726428	None:intergenic	40.0%
	AGACCTAGTAACAAGTTCTG+TGG	+	Chr7:72725036-72725055	None:intergenic	40.0%
	AGTTGTATCCCAATGTCATG+TGG	-	Chr7:72725302-72725321	MsG0780040070.01.T01:intron	40.0%
	ATAAAGAGTGATGCAAACGC+AGG	+	Chr7:72726221-72726240	None:intergenic	40.0%
	ATACCTAGACCACATGACAT+TGG	+	Chr7:72725314-72725333	None:intergenic	40.0%
	ATCGCTACTTCGTCTATCTA+TGG	-	Chr7:72724336-72724355	MsG0780040070.01.T01:CDS	40.0%
	ATTGAATACATCAGCTACGG+CGG	-	Chr7:72724242-72724261	MsG0780040070.01.T01:three_prime_UTR	40.0%
	CACAAGACAAGATAGGATCA+AGG	+	Chr7:72726039-72726058	None:intergenic	40.0%
	CTAGACTCACCGGATAAATA+CGG	-	Chr7:72727312-72727331	MsG0780040070.01.T01:CDS	40.0%
	CTTCCAAAGTTTGTCTCTGT+AGG	-	Chr7:72726403-72726422	MsG0780040070.01.T01:intron	40.0%
	GAGAGTCAACGAGATACTAA+TGG	+	Chr7:72726000-72726019	None:intergenic	40.0%
	GGAACACTGCATGTTTGAAA+AGG	+	Chr7:72725847-72725866	None:intergenic	40.0%
	GGTACCAGAAAAGAAAGATG+AGG	+	Chr7:72724362-72724381	None:intergenic	40.0%
	GGTATGTTTGGGTACTAGTT+TGG	-	Chr7:72726932-72726951	MsG0780040070.01.T01:intron	40.0%
	GTACAAACTGACATTGAAGC+AGG	+	Chr7:72725698-72725717	None:intergenic	40.0%
	GTTGTTATCAATCCCTACAG+AGG	-	Chr7:72724578-72724597	MsG0780040070.01.T01:intron	40.0%
	TACCTAGACCACATGACATT+GGG	+	Chr7:72725313-72725332	None:intergenic	40.0%
	TACTACAGATTGAAGGGTAG+TGG	+	Chr7:72726790-72726809	None:intergenic	40.0%
	TAGACTCACCGGATAAATAC+GGG	-	Chr7:72727313-72727332	MsG0780040070.01.T01:CDS	40.0%
	TAGATAGACGAAGTAGCGAT+AGG	+	Chr7:72724336-72724355	None:intergenic	40.0%
	TATTAGACGCGGTTCAAGAT+GGG	+	Chr7:72725803-72725822	None:intergenic	40.0%
	TATTTATCCGGTGAGTCTAG+AGG	+	Chr7:72727312-72727331	None:intergenic	40.0%
	TCATTGAAAAGGACCACTCA+AGG	+	Chr7:72726164-72726183	None:intergenic	40.0%
	TCTTTGCAATGAGGTCAATG+AGG	-	Chr7:72726688-72726707	MsG0780040070.01.T01:intron	40.0%
	TTATTAGACGCGGTTCAAGA+TGG	+	Chr7:72725804-72725823	None:intergenic	40.0%
!	AGCTTAATCTAGCTTCAACG+AGG	-	Chr7:72726753-72726772	MsG0780040070.01.T01:intron	40.0%
!	ATGGCCTCATCTTTCTTTTC+TGG	-	Chr7:72724355-72724374	MsG0780040070.01.T01:CDS	40.0%
!	CTTAATCTAGCTTCAACGAG+GGG	-	Chr7:72726755-72726774	MsG0780040070.01.T01:intron	40.0%
!	GAACATCGTAGCACTTTTAG+AGG	-	Chr7:72724539-72724558	MsG0780040070.01.T01:intron	40.0%
!	GCTTAATCTAGCTTCAACGA+GGG	-	Chr7:72726754-72726773	MsG0780040070.01.T01:intron	40.0%
!	GGTACTAGTTTGGTTTAGTC+TGG	-	Chr7:72726942-72726961	MsG0780040070.01.T01:intron	40.0%
!!	AGAGTATTTTTCCACCAGGT+GGG	-	Chr7:72725438-72725457	MsG0780040070.01.T01:intron	40.0%
!!	CTTTGTTGTTGGTGTTTCTG+TGG	-	Chr7:72725923-72725942	MsG0780040070.01.T01:intron	40.0%
!!	TTGGCTTTATTAGGGCTAAG+CGG	-	Chr7:72727211-72727230	MsG0780040070.01.T01:intron	40.0%
!!!	AGTGAGAGTATTTTTCCACC+AGG	-	Chr7:72725434-72725453	MsG0780040070.01.T01:intron	40.0%
!!!	CTGAGATTTTGGTTTGCCTA+GGG	+	Chr7:72725668-72725687	None:intergenic	40.0%
!!!	TCTGAGATTTTGGTTTGCCT+AGG	+	Chr7:72725669-72725688	None:intergenic	40.0%
!!!	TGAGATTTTGGTTTGCCTAG+GGG	+	Chr7:72725667-72725686	None:intergenic	40.0%
	ATCAATCCCTACAGAGGAAG+AGG	-	Chr7:72724584-72724603	MsG0780040070.01.T01:intron	45.0%
	ATCCCAATGTCATGTGGTCT+AGG	-	Chr7:72725308-72725327	MsG0780040070.01.T01:intron	45.0%
	ATCTCATAACTAACCCCACC+TGG	+	Chr7:72725455-72725474	None:intergenic	45.0%
	ATGTGGCTCCCGTATTTATC+CGG	+	Chr7:72727324-72727343	None:intergenic	45.0%
	CAAGGTTCATGATGAGAGGT+AGG	+	Chr7:72724277-72724296	None:intergenic	45.0%
	CGAGGAACAAGAAGAAGACA+TGG	-	Chr7:72724163-72724182	MsG0780040070.01.T01:three_prime_UTR	45.0%
	CGATAGGTGAAGATGGAGTA+AGG	+	Chr7:72724320-72724339	None:intergenic	45.0%
	GAAGTAGCGATAGGTGAAGA+TGG	+	Chr7:72724327-72724346	None:intergenic	45.0%
	GCTTAGCCCTAATAAAGCCA+AGG	+	Chr7:72727212-72727231	None:intergenic	45.0%
	GTGGTCACACAAGACAAGAT+AGG	+	Chr7:72726046-72726065	None:intergenic	45.0%
	TAAGGGTAAATGTGTGGGCA+CGG	-	Chr7:72724499-72724518	MsG0780040070.01.T01:intron	45.0%
	TAGCCCTAATAAAGCCAAGG+CGG	+	Chr7:72727209-72727228	None:intergenic	45.0%
	TCGACAAGGTTCATGATGAG+AGG	+	Chr7:72724281-72724300	None:intergenic	45.0%
	TGCAAACGCAGGTGATAAAC+CGG	+	Chr7:72726210-72726229	None:intergenic	45.0%
	TTAGAGGTAGAGAGAGGTCA+AGG	+	Chr7:72725868-72725887	None:intergenic	45.0%
!	CACGGTGGTTTGTAAAATGG+GGG	-	Chr7:72724517-72724536	MsG0780040070.01.T01:intron	45.0%
!	GACCGTCAATTGAGTTGTGA+TGG	-	Chr7:72726911-72726930	MsG0780040070.01.T01:intron	45.0%
!	GAGTATTTTTCCACCAGGTG+GGG	-	Chr7:72725439-72725458	MsG0780040070.01.T01:intron	45.0%
!	GCACGGTGGTTTGTAAAATG+GGG	-	Chr7:72724516-72724535	MsG0780040070.01.T01:intron	45.0%
!	GGCACGGTGGTTTGTAAAAT+GGG	-	Chr7:72724515-72724534	MsG0780040070.01.T01:intron	45.0%
!	TACAAGTTGACTTTCCGGTC+AGG	-	Chr7:72726096-72726115	MsG0780040070.01.T01:intron	45.0%
!!	AAAGGAGCACTTGCTCTGTA+TGG	-	Chr7:72727183-72727202	MsG0780040070.01.T01:intron	45.0%
!!	AGATTGAAGGGTAGTGGGAT+TGG	+	Chr7:72726784-72726803	None:intergenic	45.0%
!!	CAGCCACAGAACTTGTTACT+AGG	-	Chr7:72725030-72725049	MsG0780040070.01.T01:intron	45.0%
!!	GATTGAAGGGTAGTGGGATT+GGG	+	Chr7:72726783-72726802	None:intergenic	45.0%
!!!	GAGAGTATTTTTCCACCAGG+TGG	-	Chr7:72725437-72725456	MsG0780040070.01.T01:intron	45.0%
	ACCAATGCCTCTTCCTCTGT+AGG	+	Chr7:72724594-72724613	None:intergenic	50.0%
	AGCCACATGCATAGTGATCG+TGG	-	Chr7:72727336-72727355	MsG0780040070.01.T01:CDS	50.0%
	CCAATGCCTCTTCCTCTGTA+GGG	+	Chr7:72724593-72724612	None:intergenic	50.0%
	GATGGAATCTGGTTGTGACG+AGG	-	Chr7:72725067-72725086	MsG0780040070.01.T01:intron	50.0%
	TCATAACTAACCCCACCTGG+TGG	+	Chr7:72725452-72725471	None:intergenic	50.0%
!	GGGCACGGTGGTTTGTAAAA+TGG	-	Chr7:72724514-72724533	MsG0780040070.01.T01:intron	50.0%
!!	ATGGCCGCCTTGGCTTTATT+AGG	-	Chr7:72727202-72727221	MsG0780040070.01.T01:intron	50.0%
!!	TGGCCGCCTTGGCTTTATTA+GGG	-	Chr7:72727203-72727222	MsG0780040070.01.T01:intron	50.0%
!!!	CAGGCCCGTTTCTGAGATTT+TGG	+	Chr7:72725679-72725698	None:intergenic	50.0%
	CAGGGCAGAAAAAGCCTGAC+CGG	+	Chr7:72726113-72726132	None:intergenic	55.0%
	CGCCACGATCACTATGCATG+TGG	+	Chr7:72727341-72727360	None:intergenic	55.0%
	CGCTGAGTTCTTCGTCGACA+AGG	+	Chr7:72724295-72724314	None:intergenic	55.0%
!	CCCTACAGAGGAAGAGGCAT+TGG	-	Chr7:72724590-72724609	MsG0780040070.01.T01:intron	55.0%
!	TCTAGAGGTGCGTGCAAGTC+TGG	+	Chr7:72727297-72727316	None:intergenic	55.0%
	CTTGCTCTGTATGGCCGCCT+TGG	-	Chr7:72727192-72727211	MsG0780040070.01.T01:intron	60.0%
	GCACGCACCTCTAGACTCAC+CGG	-	Chr7:72727302-72727321	MsG0780040070.01.T01:CDS	60.0%
	GGGTAAATGTGTGGGCACGG+TGG	-	Chr7:72724502-72724521	MsG0780040070.01.T01:intron	60.0%
	GGTGCGTGCAAGTCTGGACG+AGG	+	Chr7:72727291-72727310	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr7	gene	72724160	72727509	72724160	ID=MsG0780040070.01;Name=MsG0780040070.01
Chr7	mRNA	72724160	72727509	72724160	ID=MsG0780040070.01.T01;Parent=MsG0780040070.01;Name=MsG0780040070.01.T01;_AED=0.40;_eAED=0.40;_QI=22\|1\|1\|1\|1\|1\|4\|129\|198
Chr7	exon	72724160	72724513	72724160	ID=MsG0780040070.01.T01:exon:12949;Parent=MsG0780040070.01.T01
Chr7	exon	72726581	72726636	72726581	ID=MsG0780040070.01.T01:exon:12948;Parent=MsG0780040070.01.T01
Chr7	exon	72727058	72727178	72727058	ID=MsG0780040070.01.T01:exon:12947;Parent=MsG0780040070.01.T01
Chr7	exon	72727293	72727509	72727293	ID=MsG0780040070.01.T01:exon:12946;Parent=MsG0780040070.01.T01
Chr7	five_prime_UTR	72727488	72727509	72727488	ID=MsG0780040070.01.T01:five_prime_utr;Parent=MsG0780040070.01.T01
Chr7	CDS	72727293	72727487	72727293	ID=MsG0780040070.01.T01:cds;Parent=MsG0780040070.01.T01
Chr7	CDS	72727058	72727178	72727058	ID=MsG0780040070.01.T01:cds;Parent=MsG0780040070.01.T01
Chr7	CDS	72726581	72726636	72726581	ID=MsG0780040070.01.T01:cds;Parent=MsG0780040070.01.T01
Chr7	CDS	72724289	72724513	72724289	ID=MsG0780040070.01.T01:cds;Parent=MsG0780040070.01.T01
Chr7	three_prime_UTR	72724160	72724288	72724160	ID=MsG0780040070.01.T01:three_prime_utr;Parent=MsG0780040070.01.T01

Gene Sequence

>MsG0780040070.01.T01

ATGGAAACTCCCAACAAAGACGAAACAGAAATCTCGAAAGTAGAATTCAATGATTCCGAGATTGAATACATCAGCTACGGCGGCGAACATCACCTACCTCTCATCATGAACCTTGTCGACGAAGAACTCAGCGAACCTTACTCCATCTTCACCTATCGCTACTTCGTCTATCTATGGCCTCATCTTTCTTTTCTGGCTTTTCATAAGGGTAAATGTGTGGGCACGGTGGTTTGTAAAATGGGGGAACATCGTAGCACTTTTAGAGGATACATTGCTATGCTTGTTGTTATCAATCCCTACAGAGGAAGAGGCATTGCCACAGAACTTGTTACTAGGTCTATCAAAGTGATGATGGAATCTGGTTGTGACGAGGTTACATTGGAAGCAGAAGTCACAAATAAAGGAGCACTTGCTCTGTATGGCCGCCTTGGCTTTATTAGGGCTAAGCGGCTTTTTCACTACTATTTGAATGGAGTCGATGCTTTCCGTCTTAAACTTTTATTTCCTCGTCCAGACTTGCACGCACCTCTAGACTCACCGGATAAATACGGGAGCCACATGCATAGTGATCGTGGCGATTCACTTATTGAGCAATGA

Protein sequence

>MsG0780040070.01.T01

METPNKDETEISKVEFNDSEIEYISYGGEHHLPLIMNLVDEELSEPYSIFTYRYFVYLWPHLSFLAFHKGKCVGTVVCKMGEHRSTFRGYIAMLVVINPYRGRGIATELVTRSIKVMMESGCDEVTLEAEVTNKGALALYGRLGFIRAKRLFHYYLNGVDAFRLKLLFPRPDLHAPLDSPDKYGSHMHSDRGDSLIEQ*