Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005334.01.T01 | AFK38122.1 | 91.837 | 98 | 8 | 0 | 10 | 107 | 159 | 256 | 2.08E-55 | 182 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005334.01.T01 | Q9M9G7 | 73.469 | 98 | 26 | 0 | 10 | 107 | 159 | 256 | 5.83E-49 | 159 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005334.01.T01 | A0A072VNL1 | 91.837 | 98 | 8 | 0 | 10 | 107 | 159 | 256 | 1.02e-55 | 182 |
| MsG0180005334.01.T01 | I3SCY0 | 91.837 | 98 | 8 | 0 | 10 | 107 | 159 | 256 | 9.92e-56 | 182 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047791.01 | MsG0180005334.01 | 0.834103 | 3.636752e-56 | 4.272685e-53 |
| MsG0080048152.01 | MsG0180005334.01 | 0.820285 | 7.436576e-53 | 5.859216e-50 |
| MsG0080048687.01 | MsG0180005334.01 | 0.830277 | 3.215516e-55 | 3.371937e-52 |
| MsG0080048784.01 | MsG0180005334.01 | 0.809585 | 1.759332e-50 | 1.037055e-47 |
| MsG0080048971.01 | MsG0180005334.01 | 0.805690 | 1.182033e-49 | 6.294449e-47 |
| MsG0180000139.01 | MsG0180005334.01 | 0.832405 | 9.630759e-56 | 1.075434e-52 |
| MsG0180000152.01 | MsG0180005334.01 | 0.813274 | 2.780378e-51 | 1.807610e-48 |
| MsG0180000331.01 | MsG0180005334.01 | 0.800411 | 1.459342e-48 | 6.790699e-46 |
| MsG0180000355.01 | MsG0180005334.01 | 0.803962 | 2.714061e-49 | 1.382407e-46 |
| MsG0180000384.01 | MsG0180005334.01 | 0.820491 | 6.669653e-53 | 5.285106e-50 |
| MsG0180000568.01 | MsG0180005334.01 | 0.810808 | 9.586673e-51 | 5.836173e-48 |
| MsG0180000575.01 | MsG0180005334.01 | 0.800483 | 1.411016e-48 | 6.577465e-46 |
| MsG0180000614.01 | MsG0180005334.01 | 0.858791 | 6.463599e-63 | 1.669395e-59 |
| MsG0180000615.01 | MsG0180005334.01 | 0.818927 | 1.518437e-52 | 1.152183e-49 |
| MsG0180001118.01 | MsG0180005334.01 | 0.818187 | 2.233824e-52 | 1.660582e-49 |
| MsG0180001131.01 | MsG0180005334.01 | 0.810905 | 9.134903e-51 | 5.575789e-48 |
| MsG0180001886.01 | MsG0180005334.01 | 0.811269 | 7.618389e-51 | 4.694731e-48 |
| MsG0180002547.01 | MsG0180005334.01 | 0.834694 | 2.584920e-56 | 3.090616e-53 |
| MsG0180002794.01 | MsG0180005334.01 | 0.807334 | 5.318686e-50 | 2.954445e-47 |
| MsG0180003493.01 | MsG0180005334.01 | 0.837360 | 5.443918e-57 | 7.053991e-54 |
| MsG0180003548.01 | MsG0180005334.01 | 0.830589 | 2.697870e-55 | 2.854898e-52 |
| MsG0180003572.01 | MsG0180005334.01 | 0.821770 | 3.383385e-53 | 2.778515e-50 |
| MsG0180003651.01 | MsG0180005334.01 | 0.842717 | 2.179949e-58 | 3.333887e-55 |
| MsG0180003697.01 | MsG0180005334.01 | 0.811068 | 8.421827e-51 | 5.162599e-48 |
| MsG0180003793.01 | MsG0180005334.01 | 0.868681 | 5.447878e-66 | 1.988146e-62 |
| MsG0180004046.01 | MsG0180005334.01 | 0.808581 | 2.886215e-50 | 1.656425e-47 |
| MsG0180004130.01 | MsG0180005334.01 | 0.821197 | 4.587941e-53 | 3.707932e-50 |
| MsG0180004259.01 | MsG0180005334.01 | 0.807205 | 5.663792e-50 | 3.135580e-47 |
| MsG0180004398.01 | MsG0180005334.01 | 0.849230 | 3.694041e-60 | 6.957426e-57 |
| MsG0180004481.01 | MsG0180005334.01 | 0.847982 | 8.190111e-60 | 1.481071e-56 |
| MsG0180004482.01 | MsG0180005334.01 | 0.841278 | 5.234939e-58 | 7.653073e-55 |
| MsG0180004509.01 | MsG0180005334.01 | 0.826209 | 3.076024e-54 | 2.865977e-51 |
| MsG0180004605.01 | MsG0180005334.01 | -0.805949 | 1.042783e-49 | 5.589825e-47 |
| MsG0180004854.01 | MsG0180005334.01 | 0.863893 | 1.798079e-64 | 5.538316e-61 |
| MsG0180004861.01 | MsG0180005334.01 | 0.840714 | 7.362773e-58 | 1.057762e-54 |
| MsG0180004928.01 | MsG0180005334.01 | 0.811942 | 5.437776e-51 | 3.411274e-48 |
| MsG0180005169.01 | MsG0180005334.01 | 0.803443 | 3.477919e-49 | 1.747929e-46 |
| MsG0180005334.01 | MsG0180005424.01 | 0.828418 | 9.090230e-55 | 9.030620e-52 |
| MsG0180005334.01 | MsG0180005575.01 | 0.846085 | 2.709584e-59 | 4.610599e-56 |
| MsG0180005334.01 | MsG0180005913.01 | 0.805821 | 1.109476e-49 | 5.927867e-47 |
| MsG0180005334.01 | MsG0180006013.01 | 0.800170 | 1.634276e-48 | 7.557852e-46 |
| MsG0180005334.01 | MsG0180006144.01 | 0.813540 | 2.430849e-51 | 1.591879e-48 |
| MsG0180005334.01 | MsG0280006306.01 | -0.803073 | 4.149318e-49 | 2.065536e-46 |
| MsG0180005334.01 | MsG0280006422.01 | 0.841496 | 4.587273e-58 | 6.752763e-55 |
| MsG0180005334.01 | MsG0280006461.01 | 0.807807 | 4.220467e-50 | 2.373391e-47 |
| MsG0180005334.01 | MsG0280006483.01 | 0.816317 | 5.885651e-52 | 4.156899e-49 |
| MsG0180005334.01 | MsG0280006593.01 | 0.804157 | 2.471826e-49 | 1.265318e-46 |
| MsG0180005334.01 | MsG0280006993.01 | 0.863133 | 3.094172e-64 | 9.281253e-61 |
| MsG0180005334.01 | MsG0280007193.01 | -0.802586 | 5.228468e-49 | 2.570832e-46 |
| MsG0180005334.01 | MsG0280007452.01 | 0.811794 | 5.858522e-51 | 3.660685e-48 |
| MsG0180005334.01 | MsG0280007527.01 | 0.807427 | 5.082076e-50 | 2.829864e-47 |
| MsG0180005334.01 | MsG0280007787.01 | 0.835441 | 1.675445e-56 | 2.048965e-53 |
| MsG0180005334.01 | MsG0280007847.01 | 0.852173 | 5.491160e-61 | 1.137769e-57 |
| MsG0180005334.01 | MsG0280007903.01 | 0.802860 | 4.591639e-49 | 2.273498e-46 |
| MsG0180005334.01 | MsG0280008118.01 | 0.808827 | 2.557392e-50 | 1.477183e-47 |
| MsG0180005334.01 | MsG0280008429.01 | 0.821744 | 3.430715e-53 | 2.815121e-50 |
| MsG0180005334.01 | MsG0280009141.01 | 0.826168 | 3.146102e-54 | 2.927831e-51 |
| MsG0180005334.01 | MsG0280009353.01 | 0.823502 | 1.338022e-53 | 1.154216e-50 |
| MsG0180005334.01 | MsG0280009575.01 | 0.812020 | 5.231002e-51 | 3.288486e-48 |
| MsG0180005334.01 | MsG0280010013.01 | 0.817130 | 3.867425e-52 | 2.792807e-49 |
| MsG0180005334.01 | MsG0280010082.01 | 0.814491 | 1.499739e-51 | 1.007796e-48 |
| MsG0180005334.01 | MsG0280010434.01 | 0.817046 | 4.039425e-52 | 2.910417e-49 |
| MsG0180005334.01 | MsG0280010595.01 | 0.810691 | 1.016316e-50 | 6.167780e-48 |
| MsG0180005334.01 | MsG0280010776.01 | 0.865211 | 6.962769e-65 | 2.247126e-61 |
| MsG0180005334.01 | MsG0280010778.01 | 0.802612 | 5.166297e-49 | 2.541921e-46 |
| MsG0180005334.01 | MsG0280010980.01 | 0.822949 | 1.801149e-53 | 1.529596e-50 |
| MsG0180005334.01 | MsG0280011304.01 | 0.818179 | 2.243161e-52 | 1.667154e-49 |
| MsG0180005334.01 | MsG0280011339.01 | 0.819825 | 9.477083e-53 | 7.372262e-50 |
| MsG0180005334.01 | MsG0280011387.01 | 0.823303 | 1.489273e-53 | 1.277396e-50 |
| MsG0180005334.01 | MsG0280011388.01 | 0.858913 | 5.942122e-63 | 1.541245e-59 |
| MsG0180005334.01 | MsG0380011516.01 | 0.837185 | 6.033906e-57 | 7.776892e-54 |
| MsG0180005334.01 | MsG0380011581.01 | 0.820759 | 5.787801e-53 | 4.620559e-50 |
| MsG0180005334.01 | MsG0380011614.01 | 0.811206 | 7.860980e-51 | 4.836364e-48 |
| MsG0180005334.01 | MsG0380011704.01 | 0.801463 | 8.898371e-49 | 4.252193e-46 |
| MsG0180005334.01 | MsG0380011747.01 | 0.845120 | 4.950830e-59 | 8.166227e-56 |
| MsG0180005334.01 | MsG0380012073.01 | 0.833380 | 5.513130e-56 | 6.338366e-53 |
| MsG0180005334.01 | MsG0380012122.01 | 0.806992 | 6.281498e-50 | 3.458341e-47 |
| MsG0180005334.01 | MsG0380012570.01 | 0.820873 | 5.448066e-53 | 4.363451e-50 |
| MsG0180005334.01 | MsG0380013085.01 | 0.862561 | 4.646508e-64 | 1.366522e-60 |
| MsG0180005334.01 | MsG0380013183.01 | 0.805184 | 1.508753e-49 | 7.930224e-47 |
| MsG0180005334.01 | MsG0380014175.01 | 0.823595 | 1.272681e-53 | 1.100715e-50 |
| MsG0180005334.01 | MsG0380014580.01 | 0.808636 | 2.810418e-50 | 1.615147e-47 |
| MsG0180005334.01 | MsG0380014647.01 | 0.820540 | 6.498286e-53 | 5.156381e-50 |
| MsG0180005334.01 | MsG0380015027.01 | 0.862678 | 4.276192e-64 | 1.262748e-60 |
| MsG0180005334.01 | MsG0380015216.01 | 0.805081 | 1.585921e-49 | 8.313737e-47 |
| MsG0180005334.01 | MsG0380015435.01 | 0.831788 | 1.368440e-55 | 1.500719e-52 |
| MsG0180005334.01 | MsG0380015466.01 | 0.827996 | 1.148965e-54 | 1.127438e-51 |
| MsG0180005334.01 | MsG0380015598.01 | -0.806598 | 7.611461e-50 | 4.148096e-47 |
| MsG0180005334.01 | MsG0380016133.01 | 0.814338 | 1.620731e-51 | 1.084578e-48 |
| MsG0180005334.01 | MsG0380016290.01 | 0.817398 | 3.367332e-52 | 2.449586e-49 |
| MsG0180005334.01 | MsG0380016505.01 | 0.821361 | 4.205872e-53 | 3.414291e-50 |
| MsG0180005334.01 | MsG0380016559.01 | 0.831637 | 1.491056e-55 | 1.627671e-52 |
| MsG0180005334.01 | MsG0380016560.01 | 0.851690 | 7.529888e-61 | 1.536414e-57 |
| MsG0180005334.01 | MsG0380016604.01 | 0.802096 | 6.595830e-49 | 3.202963e-46 |
| MsG0180005334.01 | MsG0380016671.01 | 0.828492 | 8.723283e-55 | 8.684582e-52 |
| MsG0180005334.01 | MsG0380016778.01 | 0.818062 | 2.384613e-52 | 1.766507e-49 |
| MsG0180005334.01 | MsG0380016860.01 | 0.833782 | 4.376172e-56 | 5.092122e-53 |
| MsG0180005334.01 | MsG0380016886.01 | 0.801464 | 8.892094e-49 | 4.249343e-46 |
| MsG0180005334.01 | MsG0380017039.01 | 0.809136 | 2.196869e-50 | 1.279526e-47 |
| MsG0180005334.01 | MsG0380017382.01 | 0.809799 | 1.582435e-50 | 9.380647e-48 |
| MsG0180005334.01 | MsG0380017947.01 | 0.829986 | 3.786627e-55 | 3.937847e-52 |
| MsG0180005334.01 | MsG0380018033.01 | 0.816849 | 4.472968e-52 | 3.205332e-49 |
| MsG0180005334.01 | MsG0480018110.01 | 0.820517 | 6.577522e-53 | 5.215614e-50 |
| MsG0180005334.01 | MsG0480018214.01 | 0.815778 | 7.765496e-52 | 5.404374e-49 |
| MsG0180005334.01 | MsG0480018278.01 | 0.825449 | 4.659950e-54 | 4.248426e-51 |
| MsG0180005334.01 | MsG0480018477.01 | 0.852402 | 4.727491e-61 | 9.866513e-58 |
| MsG0180005334.01 | MsG0480018894.01 | 0.826506 | 2.613364e-54 | 2.455559e-51 |
| MsG0180005334.01 | MsG0480019163.01 | -0.801709 | 7.924191e-49 | 3.810158e-46 |
| MsG0180005334.01 | MsG0480019380.01 | 0.845435 | 4.069524e-59 | 6.781019e-56 |
| MsG0180005334.01 | MsG0480020879.01 | 0.827764 | 1.306401e-54 | 1.273159e-51 |
| MsG0180005334.01 | MsG0480021037.01 | 0.830167 | 3.419853e-55 | 3.575102e-52 |
| MsG0180005334.01 | MsG0480021056.01 | 0.809306 | 2.019295e-50 | 1.181431e-47 |
| MsG0180005334.01 | MsG0480021077.01 | -0.824158 | 9.390290e-54 | 8.251570e-51 |
| MsG0180005334.01 | MsG0480021280.01 | 0.804630 | 1.969653e-49 | 1.020573e-46 |
| MsG0180005334.01 | MsG0480021448.01 | 0.832451 | 9.384845e-56 | 1.049306e-52 |
| MsG0180005334.01 | MsG0480021451.01 | 0.802527 | 5.378715e-49 | 2.640628e-46 |
| MsG0180005334.01 | MsG0480021453.01 | 0.822715 | 2.042240e-53 | 1.722912e-50 |
| MsG0180005334.01 | MsG0480021706.01 | 0.819218 | 1.303800e-52 | 9.971561e-50 |
| MsG0180005334.01 | MsG0480021750.01 | 0.818444 | 1.953763e-52 | 1.462878e-49 |
| MsG0180005334.01 | MsG0480021768.01 | 0.801899 | 7.243093e-49 | 3.499710e-46 |
| MsG0180005334.01 | MsG0480021994.01 | 0.801528 | 8.627634e-49 | 4.129648e-46 |
| MsG0180005334.01 | MsG0480022035.01 | 0.848151 | 7.357248e-60 | 1.337503e-56 |
| MsG0180005334.01 | MsG0480022164.01 | 0.802932 | 4.437481e-49 | 2.201153e-46 |
| MsG0180005334.01 | MsG0480022223.01 | 0.850395 | 1.745445e-60 | 3.414356e-57 |
| MsG0180005334.01 | MsG0480022696.01 | 0.857112 | 2.037356e-62 | 4.973467e-59 |
| MsG0180005334.01 | MsG0480022711.01 | 0.820390 | 7.034290e-53 | 5.558924e-50 |
| MsG0180005334.01 | MsG0480022768.01 | 0.815812 | 7.631100e-52 | 5.315445e-49 |
| MsG0180005334.01 | MsG0480022780.01 | 0.869280 | 3.485875e-66 | 1.300691e-62 |
| MsG0180005334.01 | MsG0480022877.01 | 0.807079 | 6.022484e-50 | 3.323112e-47 |
| MsG0180005334.01 | MsG0480022960.01 | 0.836279 | 1.026838e-56 | 1.288080e-53 |
| MsG0180005334.01 | MsG0480023009.01 | 0.814777 | 1.296337e-51 | 8.777883e-49 |
| MsG0180005334.01 | MsG0480023162.01 | 0.800282 | 1.550208e-48 | 7.189947e-46 |
| MsG0180005334.01 | MsG0480023221.01 | 0.865836 | 4.422756e-65 | 1.459406e-61 |
| MsG0180005334.01 | MsG0480023356.01 | 0.808337 | 3.254413e-50 | 1.855927e-47 |
| MsG0180005334.01 | MsG0480023357.01 | 0.803359 | 3.619266e-49 | 1.814990e-46 |
| MsG0180005334.01 | MsG0480023814.01 | 0.817346 | 3.459482e-52 | 2.512973e-49 |
| MsG0180005334.01 | MsG0580024051.01 | 0.833737 | 4.489773e-56 | 5.217032e-53 |
| MsG0180005334.01 | MsG0580024084.01 | 0.822158 | 2.750625e-53 | 2.283870e-50 |
| MsG0180005334.01 | MsG0580024185.01 | 0.812957 | 3.264286e-51 | 2.103930e-48 |
| MsG0180005334.01 | MsG0580024191.01 | 0.812793 | 3.545322e-51 | 2.275163e-48 |
| MsG0180005334.01 | MsG0580024197.01 | 0.808098 | 3.659849e-50 | 2.073980e-47 |
| MsG0180005334.01 | MsG0580024339.01 | 0.814371 | 1.593945e-51 | 1.067589e-48 |
| MsG0180005334.01 | MsG0580024619.01 | 0.826383 | 2.796482e-54 | 2.618558e-51 |
| MsG0180005334.01 | MsG0580024727.01 | 0.812633 | 3.842920e-51 | 2.456041e-48 |
| MsG0180005334.01 | MsG0580025268.01 | 0.847041 | 1.486016e-59 | 2.607925e-56 |
| MsG0180005334.01 | MsG0580025362.01 | -0.814992 | 1.161350e-51 | 7.910085e-49 |
| MsG0180005334.01 | MsG0580025587.01 | 0.800500 | 1.399952e-48 | 6.528759e-46 |
| MsG0180005334.01 | MsG0580025756.01 | 0.842179 | 3.028971e-58 | 4.554939e-55 |
| MsG0180005334.01 | MsG0580026226.01 | 0.817389 | 3.383114e-52 | 2.460515e-49 |
| MsG0180005334.01 | MsG0580026485.01 | 0.816806 | 4.573888e-52 | 3.273721e-49 |
| MsG0180005334.01 | MsG0580026718.01 | 0.816024 | 6.842321e-52 | 4.793945e-49 |
| MsG0180005334.01 | MsG0580027361.01 | 0.845472 | 3.975457e-59 | 6.632338e-56 |
| MsG0180005334.01 | MsG0580028044.01 | 0.831479 | 1.630750e-55 | 1.771881e-52 |
| MsG0180005334.01 | MsG0580028094.01 | 0.814717 | 1.336495e-51 | 9.035623e-49 |
| MsG0180005334.01 | MsG0580028582.01 | 0.809695 | 1.666312e-50 | 9.850664e-48 |
| MsG0180005334.01 | MsG0580028597.01 | 0.812820 | 3.496812e-51 | 2.245641e-48 |
| MsG0180005334.01 | MsG0580028630.01 | 0.817668 | 2.927265e-52 | 2.145251e-49 |
| MsG0180005334.01 | MsG0580028754.01 | 0.813478 | 2.508008e-51 | 1.639680e-48 |
| MsG0180005334.01 | MsG0580029549.01 | 0.802754 | 4.828510e-49 | 2.384421e-46 |
| MsG0180005334.01 | MsG0580029717.01 | 0.825933 | 3.577435e-54 | 3.307290e-51 |
| MsG0180005334.01 | MsG0580029924.01 | 0.812424 | 4.269087e-51 | 2.713533e-48 |
| MsG0180005334.01 | MsG0580030010.01 | 0.812007 | 5.264167e-51 | 3.308238e-48 |
| MsG0180005334.01 | MsG0680030350.01 | 0.852914 | 3.375557e-61 | 7.164611e-58 |
| MsG0180005334.01 | MsG0680031507.01 | 0.803974 | 2.697749e-49 | 1.374540e-46 |
| MsG0180005334.01 | MsG0680031628.01 | 0.868153 | 8.064931e-66 | 2.887929e-62 |
| MsG0180005334.01 | MsG0680031964.01 | 0.805189 | 1.505112e-49 | 7.912007e-47 |
| MsG0180005334.01 | MsG0680031967.01 | 0.833477 | 5.213608e-56 | 6.011119e-53 |
| MsG0180005334.01 | MsG0680032005.01 | 0.811228 | 7.776375e-51 | 4.787038e-48 |
| MsG0180005334.01 | MsG0680035465.01 | -0.802502 | 5.442174e-49 | 2.670145e-46 |
| MsG0180005334.01 | MsG0680035765.01 | 0.822798 | 1.953480e-53 | 1.651870e-50 |
| MsG0180005334.01 | MsG0680035877.01 | 0.827538 | 1.480761e-54 | 1.433595e-51 |
| MsG0180005334.01 | MsG0680035888.01 | 0.864224 | 1.417867e-64 | 4.418644e-61 |
| MsG0180005334.01 | MsG0780035922.01 | 0.803548 | 3.306893e-49 | 1.666600e-46 |
| MsG0180005334.01 | MsG0780036186.01 | 0.825329 | 4.974990e-54 | 4.520767e-51 |
| MsG0180005334.01 | MsG0780036240.01 | 0.820671 | 6.064226e-53 | 4.829028e-50 |
| MsG0180005334.01 | MsG0780036477.01 | 0.807147 | 5.824429e-50 | 3.219632e-47 |
| MsG0180005334.01 | MsG0780037093.01 | 0.838491 | 2.785758e-57 | 3.737276e-54 |
| MsG0180005334.01 | MsG0780037240.01 | 0.825791 | 3.866363e-54 | 3.559925e-51 |
| MsG0180005334.01 | MsG0780038400.01 | 0.880109 | 7.197223e-70 | 4.005067e-66 |
| MsG0180005334.01 | MsG0780038892.01 | 0.818913 | 1.529486e-52 | 1.160088e-49 |
| MsG0180005334.01 | MsG0780039848.01 | 0.814318 | 1.637436e-51 | 1.095182e-48 |
| MsG0180005334.01 | MsG0780039998.01 | 0.822919 | 1.830601e-53 | 1.553325e-50 |
| MsG0180005334.01 | MsG0780040569.01 | 0.831385 | 1.719989e-55 | 1.863595e-52 |
| MsG0180005334.01 | MsG0780040734.01 | 0.805561 | 1.257971e-49 | 6.676178e-47 |
| MsG0180005334.01 | MsG0780040858.01 | 0.812223 | 4.724597e-51 | 2.986746e-48 |
| MsG0180005334.01 | MsG0780041016.01 | 0.847648 | 1.012181e-59 | 1.811327e-56 |
| MsG0180005334.01 | MsG0780041137.01 | 0.817037 | 4.057891e-52 | 2.922969e-49 |
| MsG0180005334.01 | MsG0780041223.01 | 0.875532 | 2.862003e-68 | 1.340897e-64 |
| MsG0180005334.01 | MsG0780041268.01 | 0.831177 | 1.934749e-55 | 2.083261e-52 |
| MsG0180005334.01 | MsG0780041440.01 | 0.828964 | 6.707386e-55 | 6.769396e-52 |
| MsG0180005334.01 | MsG0780041462.01 | 0.822133 | 2.788422e-53 | 2.313679e-50 |
| MsG0180005334.01 | MsG0780041584.01 | 0.808143 | 3.579738e-50 | 2.031043e-47 |
| MsG0180005334.01 | MsG0780041692.01 | 0.800662 | 1.297546e-48 | 6.076189e-46 |
| MsG0180005334.01 | MsG0880042033.01 | 0.818952 | 1.498550e-52 | 1.137866e-49 |
| MsG0180005334.01 | MsG0880042128.01 | 0.814636 | 1.393035e-51 | 9.397230e-49 |
| MsG0180005334.01 | MsG0880042129.01 | 0.826721 | 2.322261e-54 | 2.195380e-51 |
| MsG0180005334.01 | MsG0880042131.01 | 0.803972 | 2.701003e-49 | 1.376093e-46 |
| MsG0180005334.01 | MsG0880042519.01 | 0.847106 | 1.426565e-59 | 2.509088e-56 |
| MsG0180005334.01 | MsG0880042779.01 | 0.800904 | 1.158015e-48 | 5.456410e-46 |
| MsG0180005334.01 | MsG0880042795.01 | 0.830831 | 2.352497e-55 | 2.507458e-52 |
| MsG0180005334.01 | MsG0880042978.01 | 0.803455 | 3.457078e-49 | 1.738007e-46 |
| MsG0180005334.01 | MsG0880042991.01 | 0.853864 | 1.802136e-61 | 3.949827e-58 |
| MsG0180005334.01 | MsG0880044394.01 | 0.807993 | 3.852260e-50 | 2.176944e-47 |
| MsG0180005334.01 | MsG0880044731.01 | 0.817235 | 3.663217e-52 | 2.652898e-49 |
| MsG0180005334.01 | MsG0880044975.01 | 0.834642 | 2.663323e-56 | 3.179928e-53 |
| MsG0180005334.01 | MsG0880045010.01 | -0.816520 | 5.301647e-52 | 3.765005e-49 |
| MsG0180005334.01 | MsG0880045145.01 | 0.838170 | 3.371426e-57 | 4.478516e-54 |
| MsG0180005334.01 | MsG0880045181.01 | 0.810108 | 1.357993e-50 | 8.115460e-48 |
| MsG0180005334.01 | MsG0880045684.01 | 0.841011 | 6.152914e-58 | 8.920936e-55 |
| MsG0180005334.01 | MsG0880045965.01 | 0.822742 | 2.013497e-53 | 1.700012e-50 |
| MsG0180005334.01 | MsG0880046126.01 | 0.829578 | 4.759368e-55 | 4.890906e-52 |
| MsG0180005334.01 | MsG0880046177.01 | 0.815843 | 7.508710e-52 | 5.234415e-49 |
| MsG0180005334.01 | MsG0880047212.01 | 0.846008 | 2.843578e-59 | 4.827220e-56 |
| MsG0180005334.01 | MsG0880047427.01 | 0.831187 | 1.923993e-55 | 2.072349e-52 |
| MsG0180005334.01 | MsG0880047472.01 | 0.810650 | 1.037296e-50 | 6.288244e-48 |
| MsG0180005334.01 | MsG0880047473.01 | 0.805028 | 1.626851e-49 | 8.516479e-47 |
| MsG0180005334.01 | MsG0880047764.01 | 0.804030 | 2.626765e-49 | 1.340265e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005334.01.T01 | MTR_1g097380 | 91.837 | 98 | 8 | 0 | 10 | 107 | 159 | 256 | 2.60e-59 | 182 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005334.01.T01 | AT1G71790 | 73.469 | 98 | 26 | 0 | 10 | 107 | 159 | 256 | 5.94e-50 | 159 |
Find 40 sgRNAs with CRISPR-Local
Find 118 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTACGCATGATACTTTAA+TGG | 0.211781 | 1:-90473737 | MsG0180005334.01.T01:three_prime_UTR |
| ATGGTGTCTTCTTCTTCTTC+TGG | 0.242086 | 1:+90475514 | None:intergenic |
| AAGATTACAAATAAAATAAA+AGG | 0.280009 | 1:+90473697 | None:intergenic |
| CTGTACTGGTTAACCGATAA+TGG | 0.322331 | 1:+90475495 | None:intergenic |
| TGCATATTACAGGTATACTT+TGG | 0.347203 | 1:-90474062 | MsG0180005334.01.T01:intron |
| GGGAAGGATGATTGAAGAAA+TGG | 0.378396 | 1:-90474294 | MsG0180005334.01.T01:CDS |
| CTTTACCTCTATTACATGTA+TGG | 0.387843 | 1:+90475685 | None:intergenic |
| TTTCACATGGATTGGTGGTT+CGG | 0.390679 | 1:-90473867 | MsG0180005334.01.T01:three_prime_UTR |
| GAAGAAGAAGACACCATTAT+CGG | 0.423903 | 1:-90475508 | MsG0180005334.01.T01:CDS |
| CTTTGGGAAGACAAGAGAAA+TGG | 0.432004 | 1:-90474045 | MsG0180005334.01.T01:CDS |
| TCGGGAACCTTCAGTCTGTC+TGG | 0.445337 | 1:-90475440 | MsG0180005334.01.T01:CDS |
| GCATATTACAGGTATACTTT+GGG | 0.451989 | 1:-90474061 | MsG0180005334.01.T01:intron |
| ACATGGATTGGTGGTTCGGT+TGG | 0.461417 | 1:-90473863 | MsG0180005334.01.T01:three_prime_UTR |
| GCTGAGGAACTCGCTTGATC+AGG | 0.466199 | 1:-90474264 | MsG0180005334.01.T01:intron |
| CTCATTTGCGCCACTTCAGA+CGG | 0.466227 | 1:+90474005 | None:intergenic |
| GTCTGGATCAATTAGACGTC+AGG | 0.467500 | 1:-90475423 | MsG0180005334.01.T01:intron |
| TGTGTTACAGTATTTGAAGT+AGG | 0.474254 | 1:-90473893 | MsG0180005334.01.T01:three_prime_UTR |
| TGTTATATTAGATGAGTATG+AGG | 0.476440 | 1:-90474349 | MsG0180005334.01.T01:intron |
| GACTACAAATAATGAGTCAT+CGG | 0.487491 | 1:-90475459 | MsG0180005334.01.T01:CDS |
| CAAAGTCAACATAACTGTAC+TGG | 0.498763 | 1:+90475481 | None:intergenic |
| TGGATAGCAATAGAGAATCA+TGG | 0.503305 | 1:-90473780 | MsG0180005334.01.T01:three_prime_UTR |
| GTAGGAAGTTTCACATGGAT+TGG | 0.513980 | 1:-90473875 | MsG0180005334.01.T01:three_prime_UTR |
| GGATGCCATACATGTAATAG+AGG | 0.526858 | 1:-90475690 | MsG0180005334.01.T01:intron |
| GTGCAATGCAATCAGCTCTC+GGG | 0.527836 | 1:+90473978 | None:intergenic |
| GGAAGTTTCACATGGATTGG+TGG | 0.535825 | 1:-90473872 | MsG0180005334.01.T01:three_prime_UTR |
| ACTACAAATAATGAGTCATC+GGG | 0.543741 | 1:-90475458 | MsG0180005334.01.T01:CDS |
| GGTGCAATGCAATCAGCTCT+CGG | 0.549682 | 1:+90473977 | None:intergenic |
| GGATAGCAATAGAGAATCAT+GGG | 0.551747 | 1:-90473779 | MsG0180005334.01.T01:three_prime_UTR |
| GACATCTTTGTAACATGGGA+AGG | 0.552251 | 1:-90474310 | MsG0180005334.01.T01:CDS |
| ACTGAGACCACCGTCTGAAG+TGG | 0.552812 | 1:-90474015 | MsG0180005334.01.T01:CDS |
| ATGAGGCTATCAGTTGCTGA+TGG | 0.584016 | 1:-90474332 | MsG0180005334.01.T01:CDS |
| GTATATTTGTCTCTGCCACA+TGG | 0.584950 | 1:+90473956 | None:intergenic |
| TAAACTGTTGTGTTCTGTAG+TGG | 0.586489 | 1:-90473800 | MsG0180005334.01.T01:three_prime_UTR |
| TTGAAGTAGGAAGTTTCACA+TGG | 0.605818 | 1:-90473880 | MsG0180005334.01.T01:three_prime_UTR |
| TGATGGACATCTTTGTAACA+TGG | 0.618055 | 1:-90474315 | MsG0180005334.01.T01:CDS |
| ATTTGCGCCACTTCAGACGG+TGG | 0.620496 | 1:+90474008 | None:intergenic |
| AAGAAATGGAGAGTAAGCTG+AGG | 0.653835 | 1:-90474280 | MsG0180005334.01.T01:CDS |
| AATTGATCCAGACAGACTGA+AGG | 0.662056 | 1:+90475433 | None:intergenic |
| GATGGACATCTTTGTAACAT+GGG | 0.688546 | 1:-90474314 | MsG0180005334.01.T01:CDS |
| GCTGATTGCATTGCACCATG+TGG | 0.734262 | 1:-90473971 | MsG0180005334.01.T01:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGATTACAAATAAAATAAA+AGG | + | Chr1:90475644-90475663 | None:intergenic | 10.0% |
| !! | TTATTTAATTAGGATTAATA+GGG | + | Chr1:90474505-90474524 | None:intergenic | 10.0% |
| !! | GTTATTTAATTAGGATTAAT+AGG | + | Chr1:90474506-90474525 | None:intergenic | 15.0% |
| !! | TACATAATAGTCATATATTA+AGG | + | Chr1:90474887-90474906 | None:intergenic | 15.0% |
| !! | TATTTAATTAGGATTAATAG+GGG | + | Chr1:90474504-90474523 | None:intergenic | 15.0% |
| !!! | TAATGCATTGTTATTTAATT+AGG | + | Chr1:90474515-90474534 | None:intergenic | 15.0% |
| !!! | TTTGTAATCTTTACTTTTTT+TGG | - | Chr1:90475653-90475672 | MsG0180005334.01.T01:intron | 15.0% |
| !! | ATAACAGGAAAAGATTATTT+AGG | + | Chr1:90474975-90474994 | None:intergenic | 20.0% |
| !! | ATATACATTTATACGAAAGA+TGG | - | Chr1:90474385-90474404 | MsG0180005334.01.T01:intron | 20.0% |
| !! | GATAATTAAGTATATTAGGT+GGG | - | Chr1:90474132-90474151 | MsG0180005334.01.T01:intron | 20.0% |
| !! | GTCATATATTAAGGATTTAA+TGG | + | Chr1:90474878-90474897 | None:intergenic | 20.0% |
| !! | GTGTGATAATTAAGTATATT+AGG | - | Chr1:90474128-90474147 | MsG0180005334.01.T01:intron | 20.0% |
| !! | TCTTTAATGTTAATTTAGGT+GGG | - | Chr1:90473800-90473819 | MsG0180005334.01.T01:three_prime_UTR | 20.0% |
| !! | TGATAATTAAGTATATTAGG+TGG | - | Chr1:90474131-90474150 | MsG0180005334.01.T01:intron | 20.0% |
| !! | TTGCTCTTTAATGTTAATTT+AGG | - | Chr1:90473796-90473815 | MsG0180005334.01.T01:three_prime_UTR | 20.0% |
| !!! | TTCCTCATTACAATTTTATT+TGG | - | Chr1:90474603-90474622 | MsG0180005334.01.T01:intron | 20.0% |
| ! | ATAAACTGACCCTTAATTAT+TGG | + | Chr1:90474830-90474849 | None:intergenic | 25.0% |
| ! | ATCAGAGTTTATTTATCCTT+AGG | + | Chr1:90474367-90474386 | None:intergenic | 25.0% |
| ! | ATGCTTCTTACCAATAATTA+AGG | - | Chr1:90474817-90474836 | MsG0180005334.01.T01:intron | 25.0% |
| ! | CTCTTTAATGTTAATTTAGG+TGG | - | Chr1:90473799-90473818 | MsG0180005334.01.T01:three_prime_UTR | 25.0% |
| ! | GAATCAATAAATATGATACC+AGG | - | Chr1:90474315-90474334 | MsG0180005334.01.T01:CDS | 25.0% |
| ! | GACCAAATAAAATTGTAATG+AGG | + | Chr1:90474608-90474627 | None:intergenic | 25.0% |
| ! | TAAATTCAACTGAAGGTTTA+AGG | + | Chr1:90474194-90474213 | None:intergenic | 25.0% |
| ! | TCATACTCATCTAATATAAC+AGG | + | Chr1:90474990-90475009 | None:intergenic | 25.0% |
| ! | TGCTTCTTACCAATAATTAA+GGG | - | Chr1:90474818-90474837 | MsG0180005334.01.T01:intron | 25.0% |
| ! | TGTATGTTATTGCATATTAC+AGG | - | Chr1:90475266-90475285 | MsG0180005334.01.T01:intron | 25.0% |
| ! | TGTTATATTAGATGAGTATG+AGG | - | Chr1:90474989-90475008 | MsG0180005334.01.T01:intron | 25.0% |
| ! | TTATTCTCCATTAATTGATC+TGG | - | Chr1:90474554-90474573 | MsG0180005334.01.T01:intron | 25.0% |
| ! | TTCACTAAATCCTAAATAAC+AGG | - | Chr1:90474258-90474277 | MsG0180005334.01.T01:intron | 25.0% |
| ! | TTGAAATGTCATAGTTATGA+AGG | + | Chr1:90475210-90475229 | None:intergenic | 25.0% |
| !! | ACTTCATTGACTGAATTATA+TGG | - | Chr1:90474042-90474061 | MsG0180005334.01.T01:CDS | 25.0% |
| !! | ATTCATTTTCTTTCTCAACA+AGG | - | Chr1:90474001-90474020 | MsG0180005334.01.T01:CDS | 25.0% |
| !! | CACTCTTTAACTATGTATTT+TGG | - | Chr1:90475117-90475136 | MsG0180005334.01.T01:intron | 25.0% |
| !!! | AAGTTAGTCTTAAGTGAAAT+AGG | - | Chr1:90474703-90474722 | MsG0180005334.01.T01:intron | 25.0% |
| !!! | CACTTAAGACTAACTTTTTT+GGG | + | Chr1:90474699-90474718 | None:intergenic | 25.0% |
| !!! | CTTTAACTATGTATTTTGGT+AGG | - | Chr1:90475121-90475140 | MsG0180005334.01.T01:intron | 25.0% |
| !!! | TCACTTAAGACTAACTTTTT+TGG | + | Chr1:90474700-90474719 | None:intergenic | 25.0% |
| AAAGATTGGTGGAATATATG+TGG | + | Chr1:90474084-90474103 | None:intergenic | 30.0% | |
| AACCTTCAGTTGAATTTAGA+AGG | - | Chr1:90474196-90474215 | MsG0180005334.01.T01:intron | 30.0% | |
| ACCTTCAGTTGAATTTAGAA+GGG | - | Chr1:90474197-90474216 | MsG0180005334.01.T01:intron | 30.0% | |
| ACTACAAATAATGAGTCATC+GGG | - | Chr1:90473880-90473899 | MsG0180005334.01.T01:three_prime_UTR | 30.0% | |
| ATATTCCACCAATCTTTAGA+AGG | - | Chr1:90474087-90474106 | MsG0180005334.01.T01:intron | 30.0% | |
| ATCAGGTACTTCTTGATTAT+AGG | - | Chr1:90475091-90475110 | MsG0180005334.01.T01:intron | 30.0% | |
| ATTAGGATTAATAGGGGTTA+CGG | + | Chr1:90474498-90474517 | None:intergenic | 30.0% | |
| CATTACGCATGATACTTTAA+TGG | - | Chr1:90475601-90475620 | MsG0180005334.01.T01:intron | 30.0% | |
| CTTTACCTCTATTACATGTA+TGG | + | Chr1:90473656-90473675 | None:intergenic | 30.0% | |
| GACTACAAATAATGAGTCAT+CGG | - | Chr1:90473879-90473898 | MsG0180005334.01.T01:three_prime_UTR | 30.0% | |
| GCATATTACAGGTATACTTT+GGG | - | Chr1:90475277-90475296 | MsG0180005334.01.T01:intron | 30.0% | |
| GTAAACAGATGAAATTCCTA+AGG | - | Chr1:90474348-90474367 | MsG0180005334.01.T01:intron | 30.0% | |
| TGAAATAGGCATCTATCATT+CGG | - | Chr1:90474717-90474736 | MsG0180005334.01.T01:intron | 30.0% | |
| TGCATATTACAGGTATACTT+TGG | - | Chr1:90475276-90475295 | MsG0180005334.01.T01:intron | 30.0% | |
| ! | AGTGTTTTCCAGTTGATTAA+AGG | + | Chr1:90473728-90473747 | None:intergenic | 30.0% |
| ! | ATGGATATAGCCTGTTATTT+AGG | + | Chr1:90474271-90474290 | None:intergenic | 30.0% |
| ! | CTGTTTACATTTTCAAATCC+TGG | + | Chr1:90474336-90474355 | None:intergenic | 30.0% |
| ! | TGTGTTACAGTATTTGAAGT+AGG | - | Chr1:90475445-90475464 | MsG0180005334.01.T01:CDS | 30.0% |
| ! | TTTACAGTCCTTCTAAAGAT+TGG | + | Chr1:90474098-90474117 | None:intergenic | 30.0% |
| !!! | ATCACATGTTTTAGCATACT+GGG | - | Chr1:90475414-90475433 | MsG0180005334.01.T01:intron | 30.0% |
| !!! | GGTACTTATTTTACATCTCT+CGG | + | Chr1:90474678-90474697 | None:intergenic | 30.0% |
| AGTAGCTTGAAGAATTATCG+AGG | - | Chr1:90474651-90474670 | MsG0180005334.01.T01:intron | 35.0% | |
| CAAAGTCAACATAACTGTAC+TGG | + | Chr1:90473860-90473879 | None:intergenic | 35.0% | |
| CACTTCTCCAGATCAATTAA+TGG | + | Chr1:90474564-90474583 | None:intergenic | 35.0% | |
| CTATGACATTTCAAACTCGA+AGG | - | Chr1:90475216-90475235 | MsG0180005334.01.T01:intron | 35.0% | |
| GAAATAGGCATCTATCATTC+GGG | - | Chr1:90474718-90474737 | MsG0180005334.01.T01:intron | 35.0% | |
| GAAGAAGAAGACACCATTAT+CGG | - | Chr1:90473830-90473849 | MsG0180005334.01.T01:three_prime_UTR | 35.0% | |
| GATGGACATCTTTGTAACAT+GGG | - | Chr1:90475024-90475043 | MsG0180005334.01.T01:intron | 35.0% | |
| GGATAGCAATAGAGAATCAT+GGG | - | Chr1:90475559-90475578 | MsG0180005334.01.T01:intron | 35.0% | |
| TAAACTGTTGTGTTCTGTAG+TGG | - | Chr1:90475538-90475557 | MsG0180005334.01.T01:intron | 35.0% | |
| TAGAGATCAGATTGTCTTCT+TGG | - | Chr1:90475159-90475178 | MsG0180005334.01.T01:intron | 35.0% | |
| TCCCTTCTAAATTCAACTGA+AGG | + | Chr1:90474201-90474220 | None:intergenic | 35.0% | |
| TGGATAGCAATAGAGAATCA+TGG | - | Chr1:90475558-90475577 | MsG0180005334.01.T01:intron | 35.0% | |
| TTAAGGCTGACAAGTGTTTA+GGG | + | Chr1:90474177-90474196 | None:intergenic | 35.0% | |
| TTAGGATTAATAGGGGTTAC+GGG | + | Chr1:90474497-90474516 | None:intergenic | 35.0% | |
| TTGAAGTAGGAAGTTTCACA+TGG | - | Chr1:90475458-90475477 | MsG0180005334.01.T01:CDS | 35.0% | |
| ! | TGATGGACATCTTTGTAACA+TGG | - | Chr1:90475023-90475042 | MsG0180005334.01.T01:intron | 35.0% |
| ! | TTGTGAAGTCAGAAAGCATA+TGG | + | Chr1:90474290-90474309 | None:intergenic | 35.0% |
| ! | TTTAAGGCTGACAAGTGTTT+AGG | + | Chr1:90474178-90474197 | None:intergenic | 35.0% |
| !! | ATTAAGTTGACACAAGCAAG+GGG | + | Chr1:90474931-90474950 | None:intergenic | 35.0% |
| !! | CATTAAGTTGACACAAGCAA+GGG | + | Chr1:90474932-90474951 | None:intergenic | 35.0% |
| !!! | CATCACATGTTTTAGCATAC+TGG | - | Chr1:90475413-90475432 | MsG0180005334.01.T01:intron | 35.0% |
| !!! | TGTTGCTTTTTATCAACCCA+TGG | + | Chr1:90473696-90473715 | None:intergenic | 35.0% |
| AAGAAATGGAGAGTAAGCTG+AGG | - | Chr1:90475058-90475077 | MsG0180005334.01.T01:intron | 40.0% | |
| AATTGATCCAGACAGACTGA+AGG | + | Chr1:90473908-90473927 | None:intergenic | 40.0% | |
| ATGGTGTCTTCTTCTTCTTC+TGG | + | Chr1:90473827-90473846 | None:intergenic | 40.0% | |
| CACAGCAACCTTTAATCAAC+TGG | - | Chr1:90473717-90473736 | MsG0180005334.01.T01:three_prime_UTR | 40.0% | |
| GACATCTTTGTAACATGGGA+AGG | - | Chr1:90475028-90475047 | MsG0180005334.01.T01:intron | 40.0% | |
| GGATGCCATACATGTAATAG+AGG | - | Chr1:90473648-90473667 | MsG0180005334.01.T01:three_prime_UTR | 40.0% | |
| GGGAAGGATGATTGAAGAAA+TGG | - | Chr1:90475044-90475063 | MsG0180005334.01.T01:intron | 40.0% | |
| GTAGGAAGTTTCACATGGAT+TGG | - | Chr1:90475463-90475482 | MsG0180005334.01.T01:CDS | 40.0% | |
| GTATATTTGTCTCTGCCACA+TGG | + | Chr1:90475385-90475404 | None:intergenic | 40.0% | |
| TAAGGCTGACAAGTGTTTAG+GGG | + | Chr1:90474176-90474195 | None:intergenic | 40.0% | |
| ! | ACAGTCCTTCTAAAGATTGG+TGG | + | Chr1:90474095-90474114 | None:intergenic | 40.0% |
| ! | ACCCATGGTCTTGAAAACAA+AGG | + | Chr1:90473681-90473700 | None:intergenic | 40.0% |
| ! | CTTTGGGAAGACAAGAGAAA+TGG | - | Chr1:90475293-90475312 | MsG0180005334.01.T01:intron | 40.0% |
| ! | TCTGGAGAAGTGTGAACATT+AGG | - | Chr1:90474572-90474591 | MsG0180005334.01.T01:intron | 40.0% |
| !! | CTGTACTGGTTAACCGATAA+TGG | + | Chr1:90473846-90473865 | None:intergenic | 40.0% |
| !! | GCATTAAGTTGACACAAGCA+AGG | + | Chr1:90474933-90474952 | None:intergenic | 40.0% |
| !! | TTTCACATGGATTGGTGGTT+CGG | - | Chr1:90475471-90475490 | MsG0180005334.01.T01:CDS | 40.0% |
| !!! | ACATGTTTTAGCATACTGGG+TGG | - | Chr1:90475417-90475436 | MsG0180005334.01.T01:intron | 40.0% |
| !!! | ATGTATTTTGGTAGGAGAGC+TGG | - | Chr1:90475129-90475148 | MsG0180005334.01.T01:intron | 40.0% |
| !!! | GCCTTTGTTTTCAAGACCAT+GGG | - | Chr1:90473677-90473696 | MsG0180005334.01.T01:three_prime_UTR | 40.0% |
| !!! | GGTTGGTCTTTGTTTTACTG+AGG | - | Chr1:90475492-90475511 | MsG0180005334.01.T01:CDS | 40.0% |
| !!! | TGCCTTTGTTTTCAAGACCA+TGG | - | Chr1:90473676-90473695 | MsG0180005334.01.T01:three_prime_UTR | 40.0% |
| !!! | TGTATTTTGGTAGGAGAGCT+GGG | - | Chr1:90475130-90475149 | MsG0180005334.01.T01:intron | 40.0% |
| AGAACAATCAGAGAACACGC+TGG | - | Chr1:90474778-90474797 | MsG0180005334.01.T01:intron | 45.0% | |
| ATGAGGCTATCAGTTGCTGA+TGG | - | Chr1:90475006-90475025 | MsG0180005334.01.T01:intron | 45.0% | |
| GTCTGGATCAATTAGACGTC+AGG | - | Chr1:90473915-90473934 | MsG0180005334.01.T01:three_prime_UTR | 45.0% | |
| !! | GGAAGTTTCACATGGATTGG+TGG | - | Chr1:90475466-90475485 | MsG0180005334.01.T01:CDS | 45.0% |
| CTCATTTGCGCCACTTCAGA+CGG | + | Chr1:90475336-90475355 | None:intergenic | 50.0% | |
| GCTGATTGCATTGCACCATG+TGG | - | Chr1:90475367-90475386 | MsG0180005334.01.T01:intron | 50.0% | |
| GGTGCAATGCAATCAGCTCT+CGG | + | Chr1:90475364-90475383 | None:intergenic | 50.0% | |
| GTGCAATGCAATCAGCTCTC+GGG | + | Chr1:90475363-90475382 | None:intergenic | 50.0% | |
| TTTGGTAGGAGAGCTGGGTT+GGG | - | Chr1:90475135-90475154 | MsG0180005334.01.T01:intron | 50.0% | |
| ! | TTTTGGTAGGAGAGCTGGGT+TGG | - | Chr1:90475134-90475153 | MsG0180005334.01.T01:intron | 50.0% |
| !! | ACATGGATTGGTGGTTCGGT+TGG | - | Chr1:90475475-90475494 | MsG0180005334.01.T01:CDS | 50.0% |
| ACTGAGACCACCGTCTGAAG+TGG | - | Chr1:90475323-90475342 | MsG0180005334.01.T01:intron | 55.0% | |
| ATTTGCGCCACTTCAGACGG+TGG | + | Chr1:90475333-90475352 | None:intergenic | 55.0% | |
| GCTGAGGAACTCGCTTGATC+AGG | - | Chr1:90475074-90475093 | MsG0180005334.01.T01:intron | 55.0% | |
| TCGGGAACCTTCAGTCTGTC+TGG | - | Chr1:90473898-90473917 | MsG0180005334.01.T01:three_prime_UTR | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 90473645 | 90475715 | 90473645 | ID=MsG0180005334.01;Name=MsG0180005334.01 |
| Chr1 | mRNA | 90473645 | 90475715 | 90473645 | ID=MsG0180005334.01.T01;Parent=MsG0180005334.01;Name=MsG0180005334.01.T01;_AED=0.50;_eAED=0.54;_QI=0|0.6|0.83|1|1|1|6|344|107 |
| Chr1 | exon | 90473645 | 90474072 | 90473645 | ID=MsG0180005334.01.T01:exon:48051;Parent=MsG0180005334.01.T01 |
| Chr1 | exon | 90474265 | 90474360 | 90474265 | ID=MsG0180005334.01.T01:exon:48050;Parent=MsG0180005334.01.T01 |
| Chr1 | exon | 90475424 | 90475542 | 90475424 | ID=MsG0180005334.01.T01:exon:48049;Parent=MsG0180005334.01.T01 |
| Chr1 | exon | 90475691 | 90475715 | 90475691 | ID=MsG0180005334.01.T01:exon:48048;Parent=MsG0180005334.01.T01 |
| Chr1 | CDS | 90475691 | 90475715 | 90475691 | ID=MsG0180005334.01.T01:cds;Parent=MsG0180005334.01.T01 |
| Chr1 | CDS | 90475424 | 90475542 | 90475424 | ID=MsG0180005334.01.T01:cds;Parent=MsG0180005334.01.T01 |
| Chr1 | CDS | 90474265 | 90474360 | 90474265 | ID=MsG0180005334.01.T01:cds;Parent=MsG0180005334.01.T01 |
| Chr1 | CDS | 90473989 | 90474072 | 90473989 | ID=MsG0180005334.01.T01:cds;Parent=MsG0180005334.01.T01 |
| Chr1 | three_prime_UTR | 90473645 | 90473988 | 90473645 | ID=MsG0180005334.01.T01:three_prime_utr;Parent=MsG0180005334.01.T01 |
| Gene Sequence |
| Protein sequence |
