AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047310.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047310.01.T01 MTR_4g124640 73.864 176 14 1 66 209 60 235 4.50e-85 251
MsG0880047310.01.T01 MTR_4g124650 66.279 86 25 1 18 99 511 596 7.40e-29 113
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047310.01.T01 AT4G33250 58.286 175 38 2 66 208 54 225 9.87e-65 199

Find 51 sgRNAs with CRISPR-Local

Find 455 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGATCATTAAATTCATTTC+TGG 0.142858 8:+84447668 None:intergenic
ACCTCAGCAAGCACAGTTCT+AGG 0.306787 8:+84448221 None:intergenic
GCACAGTTCTAGGAATCTTT+TGG 0.326432 8:+84448231 None:intergenic
CTTACTGTTTCCATTCTCTC+TGG 0.364558 8:+84454187 None:intergenic
ATTGCAGATGGAAAAGGATA+TGG 0.369837 8:-84454438 MsG0880047310.01.T01:CDS
CTTACTTTAGAAATTATTGC+AGG 0.379340 8:-84448305 MsG0880047310.01.T01:CDS
GGATCATTAAATTCATTTCT+GGG 0.389991 8:+84447669 None:intergenic
CGTTGCTCGCATATTGGTTA+AGG 0.392388 8:-84450089 MsG0880047310.01.T01:intron
GAATAGGCTATCAATGTAGA+AGG 0.397813 8:-84447783 MsG0880047310.01.T01:intron
AGTTGGCTACTTGGTGTTCA+AGG 0.416300 8:+84447742 None:intergenic
CGATGAGTTGACCCGTCCCC+TGG 0.429270 8:+84447697 None:intergenic
CCCAACCAGAGTTGGCTACT+TGG 0.435040 8:+84447733 None:intergenic
AAGAATCATACCACACGTTC+CGG 0.439440 8:+84449349 None:intergenic
ATGGAAATTGCAGATGGAAA+AGG 0.450055 8:-84454444 MsG0880047310.01.T01:CDS
ATAGAAAATCAGCTAAGAAT+AGG 0.455595 8:+84447588 None:intergenic
CTCAAATTGAAGCATACAAT+GGG 0.458273 8:+84447495 None:intergenic
AAGAGACATAGGCTGAAGTC+TGG 0.460902 8:+84449379 None:intergenic
ATGCAGGGATCAAGTGATTA+CGG 0.464466 8:-84454280 MsG0880047310.01.T01:intron
TAAACATACTCCAGAGAGAA+TGG 0.464719 8:-84454197 MsG0880047310.01.T01:CDS
CTCAATAACCCAACCAGAGT+TGG 0.468021 8:+84447725 None:intergenic
AATTATTGCAGGATTTGAGC+AGG 0.482549 8:-84448294 MsG0880047310.01.T01:CDS
TCAGATCGTTGCTCGCATAT+TGG 0.484728 8:-84450095 MsG0880047310.01.T01:CDS
CAATGTAGAAGGTTTATCCT+TGG 0.488911 8:-84447772 MsG0880047310.01.T01:CDS
CACTGCAGATAGTGTACCAT+TGG 0.497181 8:-84447631 MsG0880047310.01.T01:CDS
CATTAAATTCATTTCTGGGA+AGG 0.506668 8:+84447673 None:intergenic
GAACATGAATCGCATAGCCT+TGG 0.508528 8:+84448267 None:intergenic
TATTGAGAAAAGCCAGGGGA+CGG 0.514612 8:-84447709 MsG0880047310.01.T01:CDS
CCAAGTAGCCAACTCTGGTT+GGG 0.517284 8:-84447733 MsG0880047310.01.T01:CDS
TTGGGTTATTGAGAAAAGCC+AGG 0.525809 8:-84447715 MsG0880047310.01.T01:CDS
ACCAAGTAGCCAACTCTGGT+TGG 0.542756 8:-84447734 MsG0880047310.01.T01:CDS
TCTCAAATTGAAGCATACAA+TGG 0.545357 8:+84447494 None:intergenic
AATTGAAGCATACAATGGGA+TGG 0.554475 8:+84447499 None:intergenic
GAGGAAAATGAATTAGCTAT+CGG 0.559517 8:-84454220 MsG0880047310.01.T01:CDS
ATTGAGAAAAGCCAGGGGAC+GGG 0.563107 8:-84447708 MsG0880047310.01.T01:CDS
GGATTTGAGCAGGCAATCCA+AGG 0.567214 8:-84448284 MsG0880047310.01.T01:CDS
TACCATTGGAGCACATTAGA+CGG 0.570341 8:-84447617 MsG0880047310.01.T01:CDS
TGGAGCTGGCATAGCCATGA+GGG 0.570416 8:+84449399 None:intergenic
TCAATTTGAGAATTCATGAA+CGG 0.571032 8:-84447482 MsG0880047310.01.T01:three_prime_UTR
GTGTTCAAGGAATTTGTCCA+AGG 0.573518 8:+84447755 None:intergenic
CATAGGCTGAAGTCTGGAGC+TGG 0.575628 8:+84449385 None:intergenic
GAACACCAAGTAGCCAACTC+TGG 0.578457 8:-84447738 MsG0880047310.01.T01:CDS
TGGGTTATTGAGAAAAGCCA+GGG 0.586311 8:-84447714 MsG0880047310.01.T01:CDS
ATTGAAGCATACAATGGGAT+GGG 0.587058 8:+84447500 None:intergenic
ATCCGTCTAATGTGCTCCAA+TGG 0.587256 8:+84447615 None:intergenic
AAAAGCGAATAAAGTTCAGA+AGG 0.590953 8:-84454364 MsG0880047310.01.T01:intron
TCCTAGAACTGTGCTTGCTG+AGG 0.608721 8:-84448222 MsG0880047310.01.T01:intron
ACATCTGACAACTTGACTAG+AGG 0.614567 8:+84454255 None:intergenic
CATCTGACAACTTGACTAGA+GGG 0.615178 8:+84454256 None:intergenic
CTGGAGCTGGCATAGCCATG+AGG 0.661849 8:+84449398 None:intergenic
AAAAGGATATGGAAGATCTG+AGG 0.672914 8:-84454427 MsG0880047310.01.T01:CDS
GGGTTATTGAGAAAAGCCAG+GGG 0.740421 8:-84447713 MsG0880047310.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATATATATATAATTTA+CGG - Chr8:84448731-84448750 MsG0880047310.01.T01:intron 0.0%
!! AAAACAACTTATAATTTAAA+GGG - Chr8:84450897-84450916 MsG0880047310.01.T01:intron 10.0%
!! TAAAACAACTTATAATTTAA+AGG - Chr8:84450896-84450915 MsG0880047310.01.T01:intron 10.0%
!!! AATTAATTTTGTATTGAAAA+AGG + Chr8:84450679-84450698 None:intergenic 10.0%
!!! ATATTTCATCTATTTTAAAT+TGG + Chr8:84451201-84451220 None:intergenic 10.0%
!!! TATTTCATCTATTTTAAATT+GGG + Chr8:84451200-84451219 None:intergenic 10.0%
!!! TTTATATTATTATTTTTCGT+TGG - Chr8:84449727-84449746 MsG0880047310.01.T01:intron 10.0%
!!! TTTTTTATACCATTAATAAA+GGG - Chr8:84450627-84450646 MsG0880047310.01.T01:intron 10.0%
!!! TTTTTTTATACCATTAATAA+AGG - Chr8:84450626-84450645 MsG0880047310.01.T01:intron 10.0%
!! AACAAAAATTAATGAACAAA+AGG + Chr8:84452831-84452850 None:intergenic 15.0%
!! AAGAAGAATAAAATTAAGAA+TGG - Chr8:84449924-84449943 MsG0880047310.01.T01:intron 15.0%
!! AATTATTTATCTACTAATAG+TGG + Chr8:84452152-84452171 None:intergenic 15.0%
!! ACAAAAATTAATGAACAAAA+GGG + Chr8:84452830-84452849 None:intergenic 15.0%
!! ACAAAACTATGAATATTTAT+AGG - Chr8:84451156-84451175 MsG0880047310.01.T01:intron 15.0%
!! ACTAAATTCTGAATATTTAT+AGG + Chr8:84450941-84450960 None:intergenic 15.0%
!! ATGTTAATGAAAATTTCTAT+AGG + Chr8:84451032-84451051 None:intergenic 15.0%
!! ATTCAATAATAACTATAGTT+TGG + Chr8:84448587-84448606 None:intergenic 15.0%
!! CAAAACTATGAATATTTATA+GGG - Chr8:84451157-84451176 MsG0880047310.01.T01:intron 15.0%
!! CAAGTTTAACAAAAAATAAA+TGG + Chr8:84454062-84454081 None:intergenic 15.0%
!! CTAAATTCTGAATATTTATA+GGG + Chr8:84450940-84450959 None:intergenic 15.0%
!! TGTTAATGAAAATTTCTATA+GGG + Chr8:84451031-84451050 None:intergenic 15.0%
!!! AAAGTGTGATTTTATTTTAT+AGG - Chr8:84451126-84451145 MsG0880047310.01.T01:intron 15.0%
!!! AAAGTGTGATTTTATTTTAT+AGG + Chr8:84451145-84451126 None:intergenic 15.0%
!!! AAGTGTGATTTTATTTTATA+GGG + Chr8:84451146-84451127 None:intergenic 15.0%
!!! ATGATTCTATTTTTTTTTTG+TGG - Chr8:84449104-84449123 MsG0880047310.01.T01:intron 15.0%
!!! ATTTTTTGTTAAACTTGAAT+AGG - Chr8:84454065-84454084 MsG0880047310.01.T01:intron 15.0%
!!! CACAATTTAAAATGATTAAT+AGG - Chr8:84451685-84451704 MsG0880047310.01.T01:intron 15.0%
!!! CAGTTTAAAATTTGATTTTT+AGG + Chr8:84450527-84450546 None:intergenic 15.0%
!!! CAGTTTTATCTTTTATTAAA+TGG - Chr8:84448935-84448954 MsG0880047310.01.T01:intron 15.0%
!!! TAAATGATTCTTGAAAATTT+TGG - Chr8:84453853-84453872 MsG0880047310.01.T01:intron 15.0%
!!! TTTGAGATTATTCATATTTT+TGG - Chr8:84450307-84450326 MsG0880047310.01.T01:intron 15.0%
!!! TTTTGGTTTTGTTTTTTAAT+AGG - Chr8:84452442-84452461 MsG0880047310.01.T01:intron 15.0%
!!! TTTTTTTGAACAAGAAATTT+TGG - Chr8:84453895-84453914 MsG0880047310.01.T01:intron 15.0%
!! AATGACGATTAATAAGAAAA+TGG + Chr8:84451647-84451666 None:intergenic 20.0%
!! AGTTAGAAGAATAAAATTAG+GGG + Chr8:84447557-84447576 None:intergenic 20.0%
!! ATTTAAATGGACAAAACAAA+AGG + Chr8:84453672-84453691 None:intergenic 20.0%
!! CGCTATTATTATATAGATTA+TGG - Chr8:84448491-84448510 MsG0880047310.01.T01:intron 20.0%
!! CTATCAAATATGATTATAGT+TGG - Chr8:84449619-84449638 MsG0880047310.01.T01:intron 20.0%
!! GAGTTAGAAGAATAAAATTA+GGG + Chr8:84447558-84447577 None:intergenic 20.0%
!! TAAAGGGTTAATTAAGTAAA+TGG - Chr8:84450913-84450932 MsG0880047310.01.T01:intron 20.0%
!! TACTATTACAATTGACTATT+AGG + Chr8:84452648-84452667 None:intergenic 20.0%
!! TGAATAATCTCAAATTACAA+TGG + Chr8:84450301-84450320 None:intergenic 20.0%
!! TGAGTTAGAAGAATAAAATT+AGG + Chr8:84447559-84447578 None:intergenic 20.0%
!! TTATGAAAATAAGCTGAAAA+CGG + Chr8:84452237-84452256 None:intergenic 20.0%
!!! AAAATTTCCATCAACATTTT+TGG - Chr8:84451067-84451086 MsG0880047310.01.T01:intron 20.0%
!!! AAATTAGAATTTTCTGACAA+TGG - Chr8:84450440-84450459 MsG0880047310.01.T01:intron 20.0%
!!! ATAAGTTGTTTTAATTCATC+TGG + Chr8:84450889-84450908 None:intergenic 20.0%
!!! ATTCTATTTTTTTTTTGTGG+TGG - Chr8:84449107-84449126 MsG0880047310.01.T01:intron 20.0%
!!! GATATCTAAAATATATAGCA+AGG - Chr8:84450557-84450576 MsG0880047310.01.T01:intron 20.0%
!!! GTAATAGTATGAATTTTACT+TGG - Chr8:84452659-84452678 MsG0880047310.01.T01:intron 20.0%
!!! GTTGATGGAAATTTTTTATA+TGG + Chr8:84451062-84451081 None:intergenic 20.0%
!!! TAAGTTGTTTTAATTCATCT+GGG + Chr8:84450888-84450907 None:intergenic 20.0%
!!! TGACTTAAAATTTTAGTATC+CGG - Chr8:84450725-84450744 MsG0880047310.01.T01:intron 20.0%
!!! TTTAATTTGCTTTACCTATT+AGG - Chr8:84454447-84454466 MsG0880047310.01.T01:CDS 20.0%
! AACATTAATGCAAAAAGTCA+AGG + Chr8:84454422-84454441 None:intergenic 25.0%
! AATAATAACTATAGTTTGGC+AGG + Chr8:84448583-84448602 None:intergenic 25.0%
! AATTGTCAGTTTGTGAAAAT+TGG + Chr8:84449970-84449989 None:intergenic 25.0%
! ACAATACTACCCTTTATTAA+TGG + Chr8:84450639-84450658 None:intergenic 25.0%
! ACATTAATGCAAAAAGTCAA+GGG + Chr8:84454421-84454440 None:intergenic 25.0%
! AGACTTAGAAAAACTATTAG+AGG - Chr8:84453145-84453164 MsG0880047310.01.T01:intron 25.0%
! ATAAAAGATAAAACTGTGTC+CGG + Chr8:84448931-84448950 None:intergenic 25.0%
! ATAATAACTATAGTTTGGCA+GGG + Chr8:84448582-84448601 None:intergenic 25.0%
! ATAGAAAATCAGCTAAGAAT+AGG + Chr8:84454279-84454298 None:intergenic 25.0%
! ATATGATTATAGTTGGAGAA+TGG - Chr8:84449626-84449645 MsG0880047310.01.T01:intron 25.0%
! ATATGGATGATAAAGAAGAA+AGG + Chr8:84451518-84451537 None:intergenic 25.0%
! ATCATCCATATCACTTAATT+AGG - Chr8:84451527-84451546 MsG0880047310.01.T01:intron 25.0%
! ATGAAACCTGAAGAAATAAT+TGG + Chr8:84451570-84451589 None:intergenic 25.0%
! ATTAAATCAGTATAATCACC+TGG + Chr8:84453053-84453072 None:intergenic 25.0%
! ATTGTCAGTTTGTGAAAATT+GGG + Chr8:84449969-84449988 None:intergenic 25.0%
! ATTGTTTCGTTTATTCCTTT+GGG - Chr8:84453828-84453847 MsG0880047310.01.T01:intron 25.0%
! CTAAGATGAAGAAATAATCA+TGG + Chr8:84448522-84448541 None:intergenic 25.0%
! CTTTAGTATATGTGGAAAAT+AGG + Chr8:84450336-84450355 None:intergenic 25.0%
! GAAAGCAAATTATCATGTTA+TGG - Chr8:84448880-84448899 MsG0880047310.01.T01:intron 25.0%
! GAAATCAACTGATATCATAT+AGG + Chr8:84454011-84454030 None:intergenic 25.0%
! GGATCATTAAATTCATTTCT+GGG + Chr8:84454198-84454217 None:intergenic 25.0%
! TAAACCCTAATTAAGTGATA+TGG + Chr8:84451535-84451554 None:intergenic 25.0%
! TAAACGAACCAACATTTAAA+TGG + Chr8:84453685-84453704 None:intergenic 25.0%
! TAATCTTGGAAATCAAGAAA+CGG - Chr8:84447845-84447864 MsG0880047310.01.T01:intron 25.0%
! TATATCGAGTAATGCTAAAT+AGG + Chr8:84452796-84452815 None:intergenic 25.0%
! TATGAAAATAACTTGGATGA+CGG - Chr8:84448644-84448663 MsG0880047310.01.T01:intron 25.0%
! TATTAGAGGATCTATTAAGA+AGG - Chr8:84453159-84453178 MsG0880047310.01.T01:intron 25.0%
! TATTGTTTCGTTTATTCCTT+TGG - Chr8:84453827-84453846 MsG0880047310.01.T01:intron 25.0%
! TCAATTTGAGAATTCATGAA+CGG - Chr8:84454382-84454401 MsG0880047310.01.T01:CDS 25.0%
! TCATCCATATCACTTAATTA+GGG - Chr8:84451528-84451547 MsG0880047310.01.T01:intron 25.0%
! TGCAATTTGTAAACAAATTG+TGG - Chr8:84449404-84449423 MsG0880047310.01.T01:intron 25.0%
! TGGATCATTAAATTCATTTC+TGG + Chr8:84454199-84454218 None:intergenic 25.0%
! TGTATCTAATGAAAATAGCA+AGG - Chr8:84449494-84449513 MsG0880047310.01.T01:intron 25.0%
! TTAATAAGAAAATGGATACC+TGG + Chr8:84451639-84451658 None:intergenic 25.0%
! TTACTGTGAATATTAGCAAA+TGG - Chr8:84452850-84452869 MsG0880047310.01.T01:intron 25.0%
! TTAGATGTCTATAATTGAGA+AGG - Chr8:84452621-84452640 MsG0880047310.01.T01:intron 25.0%
! TTCTAACTCAAATATATGCA+GGG - Chr8:84447569-84447588 MsG0880047310.01.T01:three_prime_UTR 25.0%
! TTCTTGATTTCCAAGATTAT+GGG + Chr8:84447844-84447863 None:intergenic 25.0%
! TTTCTTGACTTTAGTATATG+TGG + Chr8:84450344-84450363 None:intergenic 25.0%
! TTTCTTGATTTCCAAGATTA+TGG + Chr8:84447845-84447864 None:intergenic 25.0%
!! AAAACTAGCTTAATATCACA+AGG + Chr8:84450609-84450628 None:intergenic 25.0%
!! ACATTTCCTTAAGCATTTTA+GGG + Chr8:84451094-84451113 None:intergenic 25.0%
!! ATGATTCTTGAAAATTTTGG+CGG - Chr8:84453856-84453875 MsG0880047310.01.T01:intron 25.0%
!! CTTACTTTAGAAATTATTGC+AGG - Chr8:84453559-84453578 MsG0880047310.01.T01:intron 25.0%
!! GTTGTGATTCTATTTTATCA+CGG - Chr8:84448289-84448308 MsG0880047310.01.T01:CDS 25.0%
!! TCAATTCCAATTATTTCTTC+AGG - Chr8:84451561-84451580 MsG0880047310.01.T01:intron 25.0%
!! TGCTGATGGAAAATTTTATA+AGG + Chr8:84451000-84451019 None:intergenic 25.0%
!! TGTTTTGTCCATTTAAATGT+TGG - Chr8:84453674-84453693 MsG0880047310.01.T01:intron 25.0%
!! TTATCACTTGCTCAATATTT+TGG - Chr8:84452425-84452444 MsG0880047310.01.T01:intron 25.0%
!! TTGTGATTCTATTTTATCAC+GGG - Chr8:84448290-84448309 MsG0880047310.01.T01:CDS 25.0%
!! TTTTGAACAAGAAATTTTGG+CGG - Chr8:84453898-84453917 MsG0880047310.01.T01:intron 25.0%
!!! AATAAAGTTCAGAAGGTATT+TGG - Chr8:84447507-84447526 MsG0880047310.01.T01:three_prime_UTR 25.0%
!!! ATTCTTAGCTGATTTTCTAT+GGG - Chr8:84454279-84454298 MsG0880047310.01.T01:intron 25.0%
!!! ATTGATTTTTTGAAAACCTG+TGG - Chr8:84453454-84453473 MsG0880047310.01.T01:intron 25.0%
!!! CACTATTTTAGTAAATGATG+CGG + Chr8:84451991-84452010 None:intergenic 25.0%
!!! TATTATTTTTCGTTGGAGAA+TGG - Chr8:84449734-84449753 MsG0880047310.01.T01:intron 25.0%
!!! TATTCTTAGCTGATTTTCTA+TGG - Chr8:84454278-84454297 MsG0880047310.01.T01:intron 25.0%
!!! TTCAGAATGTCGTTTTTATA+AGG - Chr8:84449791-84449810 MsG0880047310.01.T01:intron 25.0%
!!! TTGATTTTTTGAAAACCTGT+GGG - Chr8:84453455-84453474 MsG0880047310.01.T01:intron 25.0%
AAAAGCGAATAAAGTTCAGA+AGG - Chr8:84447500-84447519 MsG0880047310.01.T01:three_prime_UTR 30.0%
AAATGCTTAAGGAAATGTCA+CGG - Chr8:84451096-84451115 MsG0880047310.01.T01:intron 30.0%
AACCAAAATCATATGCCTAA+GGG - Chr8:84451836-84451855 MsG0880047310.01.T01:intron 30.0%
AATAGTATGTGCCATGATAA+AGG + Chr8:84448849-84448868 None:intergenic 30.0%
AATATTCTTCTCTTCTTCAC+TGG - Chr8:84452969-84452988 MsG0880047310.01.T01:intron 30.0%
ACAATCTATAACCGAAGAAA+TGG - Chr8:84448806-84448825 MsG0880047310.01.T01:intron 30.0%
ATATGACAAGCATTTCAAGA+TGG - Chr8:84453349-84453368 MsG0880047310.01.T01:intron 30.0%
ATCAGTTGTATCCATTTCTT+CGG + Chr8:84448820-84448839 None:intergenic 30.0%
CATAATATATGCAAGGTTCA+GGG + Chr8:84449145-84449164 None:intergenic 30.0%
CATTAATGCAAAAAGTCAAG+GGG + Chr8:84454420-84454439 None:intergenic 30.0%
CCACTTGTATGAAAATAACT+TGG - Chr8:84448637-84448656 MsG0880047310.01.T01:intron 30.0%
CGAAAATTATGTCAATGATC+AGG - Chr8:84451489-84451508 MsG0880047310.01.T01:intron 30.0%
CTCAAATTGAAGCATACAAT+GGG + Chr8:84454372-84454391 None:intergenic 30.0%
CTCAATTATAGACATCTAAC+AGG + Chr8:84452620-84452639 None:intergenic 30.0%
CTTCTAACTCAAATATATGC+AGG - Chr8:84447568-84447587 MsG0880047310.01.T01:three_prime_UTR 30.0%
GAAATCAAAAGCTTGAACAT+CGG - Chr8:84447758-84447777 MsG0880047310.01.T01:CDS 30.0%
GACAATGCATAATATATGCA+AGG + Chr8:84449152-84449171 None:intergenic 30.0%
GAGGAAAATGAATTAGCTAT+CGG - Chr8:84447644-84447663 MsG0880047310.01.T01:CDS 30.0%
GCTTGTCATTGATATGTTAT+GGG - Chr8:84453385-84453404 MsG0880047310.01.T01:intron 30.0%
GGATACCAAATTTAATGACT+CGG + Chr8:84450195-84450214 None:intergenic 30.0%
GTATTGAAAAAGGAAATCAC+AGG + Chr8:84450669-84450688 None:intergenic 30.0%
TAATAACTATAGTTTGGCAG+GGG + Chr8:84448581-84448600 None:intergenic 30.0%
TAGTATATGTGGAAAATAGG+AGG + Chr8:84450333-84450352 None:intergenic 30.0%
TCCAAAACTTAGTTTAACTC+CGG - Chr8:84453767-84453786 MsG0880047310.01.T01:intron 30.0%
TCTCAAATTGAAGCATACAA+TGG + Chr8:84454373-84454392 None:intergenic 30.0%
TGCTTGTCATTGATATGTTA+TGG - Chr8:84453384-84453403 MsG0880047310.01.T01:intron 30.0%
TGTTCTCATGCATAATTGAT+TGG - Chr8:84452572-84452591 MsG0880047310.01.T01:intron 30.0%
TTGAACTGGTCAAAATTAAG+TGG - Chr8:84450224-84450243 MsG0880047310.01.T01:intron 30.0%
TTGAACTTAGAAGATTGACT+TGG - Chr8:84448985-84449004 MsG0880047310.01.T01:intron 30.0%
TTGTTTCGTTTATTCCTTTG+GGG - Chr8:84453829-84453848 MsG0880047310.01.T01:intron 30.0%
! AAATTGTCGTTTGTGTAAGT+CGG - Chr8:84450099-84450118 MsG0880047310.01.T01:CDS 30.0%
! AATACCTATATCTAAAGCTG+TGG - Chr8:84452091-84452110 MsG0880047310.01.T01:intron 30.0%
! AGAGTTTTCTTCTTCTAACT+TGG + Chr8:84448095-84448114 None:intergenic 30.0%
! CATTAAATTCATTTCTGGGA+AGG + Chr8:84454194-84454213 None:intergenic 30.0%
! CTAATTGCTGACTAATTCAA+GGG - Chr8:84450749-84450768 MsG0880047310.01.T01:intron 30.0%
! GACATTTCCTTAAGCATTTT+AGG + Chr8:84451095-84451114 None:intergenic 30.0%
! GAGTTTTCTTCTTCTAACTT+GGG + Chr8:84448094-84448113 None:intergenic 30.0%
! GCAGTGTTTTTCTTCAAAAT+TGG + Chr8:84454219-84454238 None:intergenic 30.0%
! GTGCTACTATGAAAATTTAG+GGG + Chr8:84449997-84450016 None:intergenic 30.0%
! TAATTGCTGACTAATTCAAG+GGG - Chr8:84450750-84450769 MsG0880047310.01.T01:intron 30.0%
! TCTCAAATTCGTACATTTTC+TGG + Chr8:84454318-84454337 None:intergenic 30.0%
!! AGGTGCTACTATGAAAATTT+AGG + Chr8:84449999-84450018 None:intergenic 30.0%
!! ATGGTTTTTGATAATCACTG+TGG - Chr8:84453211-84453230 MsG0880047310.01.T01:intron 30.0%
!! ATTTCATCGACAAGTATTGA+TGG + Chr8:84447743-84447762 None:intergenic 30.0%
!! CCAAGTTATTTTCATACAAG+TGG + Chr8:84448640-84448659 None:intergenic 30.0%
!! CTACTAATAGTGGACAAATT+GGG + Chr8:84452142-84452161 None:intergenic 30.0%
!! GGTGCTACTATGAAAATTTA+GGG + Chr8:84449998-84450017 None:intergenic 30.0%
!! GTTTAGTATTGACTCTGATT+TGG - Chr8:84453496-84453515 MsG0880047310.01.T01:intron 30.0%
!! TACTAATAGTGGACAAATTG+GGG + Chr8:84452141-84452160 None:intergenic 30.0%
!! TCTACTAATAGTGGACAAAT+TGG + Chr8:84452143-84452162 None:intergenic 30.0%
!! TGGGGATTTTTGTTTATCTT+TGG - Chr8:84453474-84453493 MsG0880047310.01.T01:intron 30.0%
!! TTCTTAGCTGATTTTCTATG+GGG - Chr8:84454280-84454299 MsG0880047310.01.T01:intron 30.0%
!! TTGACATAATTTTCGAGATC+TGG + Chr8:84451484-84451503 None:intergenic 30.0%
!!! AGTTTTGGAGAATTAATGCA+AGG + Chr8:84453756-84453775 None:intergenic 30.0%
!!! ATTTTTTTTTTGTGGTGGTC+AGG - Chr8:84449112-84449131 MsG0880047310.01.T01:intron 30.0%
!!! TGATTTTTTGAAAACCTGTG+GGG - Chr8:84453456-84453475 MsG0880047310.01.T01:intron 30.0%
!!! TTTTTTTTTTGTGGTGGTCA+GGG - Chr8:84449113-84449132 MsG0880047310.01.T01:intron 30.0%
AAAAAAGCAAGACTGAGAGA+GGG + Chr8:84449888-84449907 None:intergenic 35.0%
AAAACGAAGATGGTTGAATG+CGG + Chr8:84448554-84448573 None:intergenic 35.0%
AAAAGGATATGGAAGATCTG+AGG - Chr8:84447437-84447456 MsG0880047310.01.T01:three_prime_UTR 35.0%
AAGTTTACAGTTCATCCTCT+TGG + Chr8:84449318-84449337 None:intergenic 35.0%
AATGCTTAAGGAAATGTCAC+GGG - Chr8:84451097-84451116 MsG0880047310.01.T01:intron 35.0%
AATTATTGCAGGATTTGAGC+AGG - Chr8:84453570-84453589 MsG0880047310.01.T01:intron 35.0%
AATTGAAGCATACAATGGGA+TGG + Chr8:84454368-84454387 None:intergenic 35.0%
AGATAAACAAAAATCCCCAC+AGG + Chr8:84453473-84453492 None:intergenic 35.0%
AGCCCTCATAATAGAAAACA+TGG - Chr8:84449539-84449558 MsG0880047310.01.T01:intron 35.0%
ATAGGGACTAAAAATGCTGA+TGG + Chr8:84451014-84451033 None:intergenic 35.0%
ATCAACCAGCTGAAAAATCA+AGG - Chr8:84447970-84447989 MsG0880047310.01.T01:intron 35.0%
ATGGAAATTGCAGATGGAAA+AGG - Chr8:84447420-84447439 MsG0880047310.01.T01:three_prime_UTR 35.0%
ATTCATCGGTCAAAATCAGT+GGG + Chr8:84450062-84450081 None:intergenic 35.0%
ATTGAAGCATACAATGGGAT+GGG + Chr8:84454367-84454386 None:intergenic 35.0%
ATTGCAGATGGAAAAGGATA+TGG - Chr8:84447426-84447445 MsG0880047310.01.T01:three_prime_UTR 35.0%
CAAGAATCATTTAACCCCAA+AGG + Chr8:84453846-84453865 None:intergenic 35.0%
CAATATAGCCAGTTAGTTAG+GGG - Chr8:84450125-84450144 MsG0880047310.01.T01:intron 35.0%
CAATGTAGAAGGTTTATCCT+TGG - Chr8:84454092-84454111 MsG0880047310.01.T01:intron 35.0%
CATAATAGAAAACATGGGCA+GGG - Chr8:84449545-84449564 MsG0880047310.01.T01:intron 35.0%
CCAATATAGCCAGTTAGTTA+GGG - Chr8:84450124-84450143 MsG0880047310.01.T01:intron 35.0%
CCTTGAATTAGTCAGCAATT+AGG + Chr8:84450751-84450770 None:intergenic 35.0%
CTGTGAATATTAGCAAATGG+AGG - Chr8:84452853-84452872 MsG0880047310.01.T01:intron 35.0%
GAACCAAAATCATATGCCTA+AGG - Chr8:84451835-84451854 MsG0880047310.01.T01:intron 35.0%
GAATAGGCTATCAATGTAGA+AGG - Chr8:84454081-84454100 MsG0880047310.01.T01:intron 35.0%
GACACTATTACATCTTAGAG+AGG - Chr8:84447993-84448012 MsG0880047310.01.T01:intron 35.0%
GCATAATATATGCAAGGTTC+AGG + Chr8:84449146-84449165 None:intergenic 35.0%
GCCCTCATAATAGAAAACAT+GGG - Chr8:84449540-84449559 MsG0880047310.01.T01:intron 35.0%
GCTTATCATGATAAGCACTT+TGG - Chr8:84452352-84452371 MsG0880047310.01.T01:intron 35.0%
GGGAACTACTTTATTCAAGA+TGG - Chr8:84449351-84449370 MsG0880047310.01.T01:intron 35.0%
GTTTCTCTTATAGTTTCTCC+AGG - Chr8:84453093-84453112 MsG0880047310.01.T01:intron 35.0%
TAAACATACTCCAGAGAGAA+TGG - Chr8:84447667-84447686 MsG0880047310.01.T01:CDS 35.0%
TATCAGATATTTGTACCGCA+AGG + Chr8:84453330-84453349 None:intergenic 35.0%
TATGCGTTCATTCATCAAAC+CGG + Chr8:84453789-84453808 None:intergenic 35.0%
TCAACCAGCTGAAAAATCAA+GGG - Chr8:84447971-84447990 MsG0880047310.01.T01:intron 35.0%
TCATAATAGAAAACATGGGC+AGG - Chr8:84449544-84449563 MsG0880047310.01.T01:intron 35.0%
TCGAGTAATGCTAAATAGGA+AGG + Chr8:84452792-84452811 None:intergenic 35.0%
TGAAGAGAGAGTTTCGAAAT+GGG - Chr8:84451344-84451363 MsG0880047310.01.T01:intron 35.0%
TGAATCCAAACAGTTCGATT+GGG - Chr8:84452183-84452202 MsG0880047310.01.T01:intron 35.0%
TGTATATGCTGCATGTCATA+GGG + Chr8:84449435-84449454 None:intergenic 35.0%
TGTTCTGTCTCACTATTTAG+AGG - Chr8:84452895-84452914 MsG0880047310.01.T01:intron 35.0%
TTAGGGACCAAAAATGTTGA+TGG + Chr8:84451077-84451096 None:intergenic 35.0%
TTATAGACATCTAACAGGAG+TGG + Chr8:84452615-84452634 None:intergenic 35.0%
TTGTATATGCTGCATGTCAT+AGG + Chr8:84449436-84449455 None:intergenic 35.0%
TTTGGTCCCTAAAATGCTTA+AGG - Chr8:84451085-84451104 MsG0880047310.01.T01:intron 35.0%
! AATTGTCGTTTGTGTAAGTC+GGG - Chr8:84450100-84450119 MsG0880047310.01.T01:CDS 35.0%
! ACCGGAGTTAAACTAAGTTT+TGG + Chr8:84453771-84453790 None:intergenic 35.0%
! AGGAATCTTTTGGTAAGTCA+AGG + Chr8:84453626-84453645 None:intergenic 35.0%
! AGTGATAATGTCAGCTATCT+TGG + Chr8:84452413-84452432 None:intergenic 35.0%
! ATATCTAAAGCTGTGGCAAT+AGG - Chr8:84452098-84452117 MsG0880047310.01.T01:intron 35.0%
! ATCCCTTAGGCATATGATTT+TGG + Chr8:84451841-84451860 None:intergenic 35.0%
! ATCTGAGAACTCATTTTCTC+AGG + Chr8:84451755-84451774 None:intergenic 35.0%
! ATCTTTTACCCCTAACTAAC+TGG + Chr8:84450136-84450155 None:intergenic 35.0%
! CCTAATTGCTGACTAATTCA+AGG - Chr8:84450748-84450767 MsG0880047310.01.T01:intron 35.0%
! GATTTTGCAACCCATAATCT+TGG - Chr8:84447831-84447850 MsG0880047310.01.T01:intron 35.0%
! GCCCATGTTTTCTATTATGA+GGG + Chr8:84449544-84449563 None:intergenic 35.0%
! GTCAATCTTTTGTGTTACAC+AGG - Chr8:84452681-84452700 MsG0880047310.01.T01:intron 35.0%
! GTTTCTCAATACAAGAGTGT+TGG - Chr8:84453945-84453964 MsG0880047310.01.T01:intron 35.0%
! TCATATGCCTAAGGGATTTT+TGG - Chr8:84451844-84451863 MsG0880047310.01.T01:intron 35.0%
! TGATGAGTTGGAAAAAGACA+TGG - Chr8:84453192-84453211 MsG0880047310.01.T01:intron 35.0%
! TGCCCATGTTTTCTATTATG+AGG + Chr8:84449545-84449564 None:intergenic 35.0%
! TTCAGACAGTACTTTTGACA+TGG + Chr8:84447877-84447896 None:intergenic 35.0%
! TTTGCGATGAAATCGCATTT+TGG + Chr8:84450253-84450272 None:intergenic 35.0%
!! AAACGACATTCTGAAGTTCA+AGG + Chr8:84449786-84449805 None:intergenic 35.0%
!! ACTTAGAAGATTGACTTGGT+TGG - Chr8:84448989-84449008 MsG0880047310.01.T01:intron 35.0%
!! ATCTGAGAACTGATTTTCTC+AGG + Chr8:84449834-84449853 None:intergenic 35.0%
!! ATTGCCACAGCTTTAGATAT+AGG + Chr8:84452098-84452117 None:intergenic 35.0%
!! CCTATGTCTCTTTTTGATTC+CGG - Chr8:84452496-84452515 MsG0880047310.01.T01:intron 35.0%
!! GCTGTTTTCATAAGCTATCT+CGG + Chr8:84452265-84452284 None:intergenic 35.0%
!! TATCCACATAAGTGTTGAAC+TGG - Chr8:84450210-84450229 MsG0880047310.01.T01:intron 35.0%
!! TCAAAGCTTTGAAGCAAGAA+AGG - Chr8:84449283-84449302 MsG0880047310.01.T01:intron 35.0%
!! TTGACTCTGATTTGGCTTAT+AGG - Chr8:84453504-84453523 MsG0880047310.01.T01:intron 35.0%
!! TTGTTTCGTAGTGTTGACAT+AGG + Chr8:84450864-84450883 None:intergenic 35.0%
!!! TGTTTTTTAATAGGCCCTCA+TGG - Chr8:84452451-84452470 MsG0880047310.01.T01:intron 35.0%
AAATGGAGATCCTTCTGATC+AGG - Chr8:84448952-84448971 MsG0880047310.01.T01:intron 40.0%
AACAACATCTAGCAGAGCTT+GGG - Chr8:84449012-84449031 MsG0880047310.01.T01:intron 40.0%
AACTTTCATCATCCTTTCGC+GGG + Chr8:84448272-84448291 None:intergenic 40.0%
AAGAATCATACCACACGTTC+CGG + Chr8:84452518-84452537 None:intergenic 40.0%
AATCCAAACAGTTCGATTGG+GGG - Chr8:84452185-84452204 MsG0880047310.01.T01:intron 40.0%
AATGTTCAAGAATGCTGCTG+AGG - Chr8:84448364-84448383 MsG0880047310.01.T01:intron 40.0%
ACATCTGACAACTTGACTAG+AGG + Chr8:84447612-84447631 None:intergenic 40.0%
AGAAAATGGATACCTGGTAG+AGG + Chr8:84451633-84451652 None:intergenic 40.0%
AGAGAATGGAAACAGTAAGC+AGG - Chr8:84447681-84447700 MsG0880047310.01.T01:CDS 40.0%
AGCCAATCCAAAAATCCCTT+AGG + Chr8:84451854-84451873 None:intergenic 40.0%
ATAAAGTAGTTCCCTCTCCT+CGG + Chr8:84449345-84449364 None:intergenic 40.0%
ATGCAGGGATCAAGTGATTA+CGG - Chr8:84447584-84447603 MsG0880047310.01.T01:exon 40.0%
ATGCTTAAGGAAATGTCACG+GGG - Chr8:84451098-84451117 MsG0880047310.01.T01:intron 40.0%
CAAAAGGGACTAAAAGTGAG+GGG + Chr8:84450025-84450044 None:intergenic 40.0%
CAAACCACAAAATGCACATG+TGG - Chr8:84450166-84450185 MsG0880047310.01.T01:intron 40.0%
CAACTTTCATCATCCTTTCG+CGG + Chr8:84448273-84448292 None:intergenic 40.0%
CATCTGACAACTTGACTAGA+GGG + Chr8:84447611-84447630 None:intergenic 40.0%
CATTCATCGGTCAAAATCAG+TGG + Chr8:84450063-84450082 None:intergenic 40.0%
CCCCTAAATCACTAGAAGTA+GGG - Chr8:84453120-84453139 MsG0880047310.01.T01:intron 40.0%
CCCCTACTTCTAGTGATTTA+GGG + Chr8:84453124-84453143 None:intergenic 40.0%
CCCTAAATCACTAGAAGTAG+GGG - Chr8:84453121-84453140 MsG0880047310.01.T01:intron 40.0%
CCCTAACTAACTGGCTATAT+TGG + Chr8:84450127-84450146 None:intergenic 40.0%
CCCTACTTCTAGTGATTTAG+GGG + Chr8:84453123-84453142 None:intergenic 40.0%
CCGGAATCAAAAAGAGACAT+AGG + Chr8:84452499-84452518 None:intergenic 40.0%
CGATTCTATCAAATCTTGCC+TGG + Chr8:84448473-84448492 None:intergenic 40.0%
CTGAATCCAAACAGTTCGAT+TGG - Chr8:84452182-84452201 MsG0880047310.01.T01:intron 40.0%
CTGATCGATCTCCTTTATCA+TGG - Chr8:84448835-84448854 MsG0880047310.01.T01:intron 40.0%
CTGGACTAATCCACTAAAGT+TGG - Chr8:84450805-84450824 MsG0880047310.01.T01:intron 40.0%
CTGTTTGGATTCAGAAGTGA+AGG + Chr8:84452176-84452195 None:intergenic 40.0%
CTTACTGTTTCCATTCTCTC+TGG + Chr8:84447680-84447699 None:intergenic 40.0%
CTTCCATATACCTGATCAGA+AGG + Chr8:84448965-84448984 None:intergenic 40.0%
GAAAAAAGCAAGACTGAGAG+AGG + Chr8:84449889-84449908 None:intergenic 40.0%
GAATCCAAACAGTTCGATTG+GGG - Chr8:84452184-84452203 MsG0880047310.01.T01:intron 40.0%
GAATTAGTCAGCAATTAGGC+CGG + Chr8:84450747-84450766 None:intergenic 40.0%
GACCAGAGGAGGAAAATAAT+GGG + Chr8:84448218-84448237 None:intergenic 40.0%
GATCCTTCTGATCAGGTATA+TGG - Chr8:84448959-84448978 MsG0880047310.01.T01:intron 40.0%
GCAAAAGGGACTAAAAGTGA+GGG + Chr8:84450026-84450045 None:intergenic 40.0%
GCCAATATAGCCAGTTAGTT+AGG - Chr8:84450123-84450142 MsG0880047310.01.T01:intron 40.0%
GGATCTAGAGATTGATGAGT+TGG - Chr8:84453180-84453199 MsG0880047310.01.T01:intron 40.0%
GGCAATGCTGAAGAACTTAT+TGG - Chr8:84447706-84447725 MsG0880047310.01.T01:CDS 40.0%
GGCATCCGAGTCATTAAATT+TGG - Chr8:84450187-84450206 MsG0880047310.01.T01:intron 40.0%
GTCAGTTTGTGAAAATTGGG+AGG + Chr8:84449966-84449985 None:intergenic 40.0%
GTGAAGAGAGAGTTTCGAAA+TGG - Chr8:84451343-84451362 MsG0880047310.01.T01:intron 40.0%
GTGTTCAAGGAATTTGTCCA+AGG + Chr8:84454112-84454131 None:intergenic 40.0%
GTTAATTGCGTCGTGTAACT+GGG - Chr8:84453301-84453320 MsG0880047310.01.T01:intron 40.0%
TACCATTGGAGCACATTAGA+CGG - Chr8:84454247-84454266 MsG0880047310.01.T01:CDS 40.0%
TACCGAGTTAAAAGAGCTAG+TGG - Chr8:84448414-84448433 MsG0880047310.01.T01:intron 40.0%
TCAGATTGTAGCTCGCATAT+TGG - Chr8:84449848-84449867 MsG0880047310.01.T01:intron 40.0%
TCCCCTAAATCACTAGAAGT+AGG - Chr8:84453119-84453138 MsG0880047310.01.T01:intron 40.0%
TCCCCTACTTCTAGTGATTT+AGG + Chr8:84453125-84453144 None:intergenic 40.0%
TCGAGATCTGGAAGAATATC+TGG + Chr8:84451472-84451491 None:intergenic 40.0%
TCTTTGAACTGCGTAAGTCA+TGG + Chr8:84452938-84452957 None:intergenic 40.0%
TGACCAGTTCAACACTTATG+TGG + Chr8:84450216-84450235 None:intergenic 40.0%
TGATCCTACTATCCACTTGA+GGG - Chr8:84450775-84450794 MsG0880047310.01.T01:intron 40.0%
TGCAAAAGGGACTAAAAGTG+AGG + Chr8:84450027-84450046 None:intergenic 40.0%
TGCATTACCAAAGCAACTTC+TGG - Chr8:84448443-84448462 MsG0880047310.01.T01:intron 40.0%
TGGGTTATTGAGAAAAGCCA+GGG - Chr8:84454150-84454169 MsG0880047310.01.T01:intron 40.0%
TGTTAATTGCGTCGTGTAAC+TGG - Chr8:84453300-84453319 MsG0880047310.01.T01:intron 40.0%
TTACATCTTAGAGAGGAAGC+TGG - Chr8:84448000-84448019 MsG0880047310.01.T01:intron 40.0%
TTCAGAAATCAGAGACAAGC+TGG - Chr8:84448029-84448048 MsG0880047310.01.T01:intron 40.0%
TTCATCGGTCAAAATCAGTG+GGG + Chr8:84450061-84450080 None:intergenic 40.0%
TTCCTCCAGTAGGAAAACAA+AGG - Chr8:84449377-84449396 MsG0880047310.01.T01:CDS 40.0%
TTCTTCTCTTCTTCACTGGA+AGG - Chr8:84452973-84452992 MsG0880047310.01.T01:intron 40.0%
TTGATCCTACTATCCACTTG+AGG - Chr8:84450774-84450793 MsG0880047310.01.T01:intron 40.0%
TTGGGTTATTGAGAAAAGCC+AGG - Chr8:84454149-84454168 MsG0880047310.01.T01:intron 40.0%
! ACAATTTTGTCCTCGAACAC+CGG + Chr8:84450086-84450105 None:intergenic 40.0%
! AGCTGATTATGTGTTGCTGT+TGG + Chr8:84448140-84448159 None:intergenic 40.0%
! ATTGTCGTTTGTGTAAGTCG+GGG - Chr8:84450101-84450120 MsG0880047310.01.T01:CDS 40.0%
! CAGATGTCTTTCTTTTGCTG+AGG - Chr8:84447625-84447644 MsG0880047310.01.T01:CDS 40.0%
! CTGATTATGTGTTGCTGTTG+GGG + Chr8:84448138-84448157 None:intergenic 40.0%
! GCTGATTATGTGTTGCTGTT+GGG + Chr8:84448139-84448158 None:intergenic 40.0%
! GTTGCTTTACGATAAGAGAG+AGG + Chr8:84448172-84448191 None:intergenic 40.0%
! TACCCATTATTTTCCTCCTC+TGG - Chr8:84448213-84448232 MsG0880047310.01.T01:intron 40.0%
! TGATGCTTTTCACCTTTGCA+CGG - Chr8:84448758-84448777 MsG0880047310.01.T01:intron 40.0%
! TGTAGCTCGCATATTGGTTA+AGG - Chr8:84449854-84449873 MsG0880047310.01.T01:intron 40.0%
! TTACCCATTGTTGGTTGGTA+AGG - Chr8:84452057-84452076 MsG0880047310.01.T01:intron 40.0%
!! AGAGTTTGTTGTGCTTCTTG+TGG - Chr8:84451945-84451964 MsG0880047310.01.T01:intron 40.0%
!! AGCCACTAGCTCTTTTAACT+CGG + Chr8:84448419-84448438 None:intergenic 40.0%
!! CAACTTTAGTGGATTAGTCC+AGG + Chr8:84450807-84450826 None:intergenic 40.0%
!! GGGGCGTTGTTTAATTTGAA+AGG + Chr8:84448119-84448138 None:intergenic 40.0%
!! TCCTTGCTGTTGTACTTGTA+CGG + Chr8:84451389-84451408 None:intergenic 40.0%
!! TCGACAAGTATTGATGGATC+AGG + Chr8:84447737-84447756 None:intergenic 40.0%
!! TGATTTTGACCGATGAATGC+CGG - Chr8:84450064-84450083 MsG0880047310.01.T01:intron 40.0%
!! TGCCTAAGGGATTTTTGGAT+TGG - Chr8:84451849-84451868 MsG0880047310.01.T01:intron 40.0%
!!! GCACAGTTCTAGGAATCTTT+TGG + Chr8:84453636-84453655 None:intergenic 40.0%
!!! GGGTTGTCACTTTTGCAAAA+GGG + Chr8:84450040-84450059 None:intergenic 40.0%
AAGAGACATAGGCTGAAGTC+TGG + Chr8:84452488-84452507 None:intergenic 45.0%
AAGATGGAAGTTCCTCCAGT+AGG - Chr8:84449367-84449386 MsG0880047310.01.T01:CDS 45.0%
AATAGAAAACATGGGCAGGG+TGG - Chr8:84449548-84449567 MsG0880047310.01.T01:intron 45.0%
AATCCACTAAAGTTGGCACG+AGG - Chr8:84450812-84450831 MsG0880047310.01.T01:intron 45.0%
AATCCTCGTGCCAACTTTAG+TGG + Chr8:84450818-84450837 None:intergenic 45.0%
AATGGAAACAGTAAGCAGGC+AGG - Chr8:84447685-84447704 MsG0880047310.01.T01:CDS 45.0%
ACGCCTTACCAACCAACAAT+GGG + Chr8:84452063-84452082 None:intergenic 45.0%
ACTTTCATCATCCTTTCGCG+GGG + Chr8:84448271-84448290 None:intergenic 45.0%
AGGAGAACATTCGGAGTTTC+AGG - Chr8:84448384-84448403 MsG0880047310.01.T01:intron 45.0%
ATAAGTATCACGACCAGAGG+AGG + Chr8:84448229-84448248 None:intergenic 45.0%
ATCCGTCTAATGTGCTCCAA+TGG + Chr8:84454252-84454271 None:intergenic 45.0%
ATGAGCTTAGCTCAGTTGGT+AGG + Chr8:84449175-84449194 None:intergenic 45.0%
ATGCTGCTGAGGAGAACATT+CGG - Chr8:84448375-84448394 MsG0880047310.01.T01:intron 45.0%
ATGTAGCCAACCTCACTTAG+TGG - Chr8:84453247-84453266 MsG0880047310.01.T01:intron 45.0%
CAAAACCTATACCCGTGCAA+AGG + Chr8:84448773-84448792 None:intergenic 45.0%
CAACCAACAATGGGTAACGA+TGG + Chr8:84452054-84452073 None:intergenic 45.0%
CAACCTCACTTAGTGGGATA+AGG - Chr8:84453254-84453273 MsG0880047310.01.T01:intron 45.0%
CAAGTACAACAGCAAGGACA+AGG - Chr8:84451391-84451410 MsG0880047310.01.T01:intron 45.0%
CACTGCAGATAGTGTACCAT+TGG - Chr8:84454233-84454252 MsG0880047310.01.T01:CDS 45.0%
CAGGGGAAACAAAACGAAGA+TGG + Chr8:84448564-84448583 None:intergenic 45.0%
CATATAGTTGAAGCTGTGCC+AGG - Chr8:84453032-84453051 MsG0880047310.01.T01:intron 45.0%
CATCGTTACCCATTGTTGGT+TGG - Chr8:84452052-84452071 MsG0880047310.01.T01:intron 45.0%
CGACCAGAGGAGGAAAATAA+TGG + Chr8:84448219-84448238 None:intergenic 45.0%
CGCTATCTTACCACTCACAA+GGG + Chr8:84451285-84451304 None:intergenic 45.0%
CTCAATAACCCAACCAGAGT+TGG + Chr8:84454142-84454161 None:intergenic 45.0%
CTCCAGTAGGAAAACAAAGG+AGG - Chr8:84449380-84449399 MsG0880047310.01.T01:CDS 45.0%
CTGGTCGTGATACTTATGCA+AGG - Chr8:84448232-84448251 MsG0880047310.01.T01:CDS 45.0%
CTTATCCCACTAAGTGAGGT+TGG + Chr8:84453256-84453275 None:intergenic 45.0%
GAACAACATCTAGCAGAGCT+TGG - Chr8:84449011-84449030 MsG0880047310.01.T01:intron 45.0%
GAACATGAATCGCATAGCCT+TGG + Chr8:84453600-84453619 None:intergenic 45.0%
GAACTGTAAACTTACAGCCG+AGG - Chr8:84449325-84449344 MsG0880047310.01.T01:intron 45.0%
GATCCTACTATCCACTTGAG+GGG - Chr8:84450776-84450795 MsG0880047310.01.T01:intron 45.0%
GGACTAAAAGTGAGGGGAAA+AGG + Chr8:84450019-84450038 None:intergenic 45.0%
GGAGAACATTCGGAGTTTCA+GGG - Chr8:84448385-84448404 MsG0880047310.01.T01:intron 45.0%
GGGTTATTGAGAAAAGCCAG+GGG - Chr8:84454151-84454170 MsG0880047310.01.T01:intron 45.0%
TAAACTTACAGCCGAGGAGA+GGG - Chr8:84449331-84449350 MsG0880047310.01.T01:intron 45.0%
TACGCCTTACCAACCAACAA+TGG + Chr8:84452064-84452083 None:intergenic 45.0%
TAGTGATTTAGGGGAAGACC+TGG + Chr8:84453114-84453133 None:intergenic 45.0%
TATTGAGAAAAGCCAGGGGA+CGG - Chr8:84454155-84454174 MsG0880047310.01.T01:intron 45.0%
TCACTTAGTGGGATAAGGCT+TGG - Chr8:84453259-84453278 MsG0880047310.01.T01:intron 45.0%
TCAGATCGTTGCTCGCATAT+TGG - Chr8:84451769-84451788 MsG0880047310.01.T01:intron 45.0%
TCATCGGTCAAAATCAGTGG+GGG + Chr8:84450060-84450079 None:intergenic 45.0%
TCGCTATCTTACCACTCACA+AGG + Chr8:84451286-84451305 None:intergenic 45.0%
TGAACCTGCAGACTCAGTTT+CGG - Chr8:84449060-84449079 MsG0880047310.01.T01:intron 45.0%
TGCATAAGTATCACGACCAG+AGG + Chr8:84448232-84448251 None:intergenic 45.0%
TGGAAGGTTTCGTCAGTTCT+GGG - Chr8:84452989-84453008 MsG0880047310.01.T01:intron 45.0%
TGGCAAACCAGAAGTTGCTT+TGG + Chr8:84448453-84448472 None:intergenic 45.0%
TGTAGCCAACCTCACTTAGT+GGG - Chr8:84453248-84453267 MsG0880047310.01.T01:intron 45.0%
TTATGCAGAACCTCAGTGCT+CGG + Chr8:84447810-84447829 None:intergenic 45.0%
TTTCACCTTTGCACGGGTAT+AGG - Chr8:84448765-84448784 MsG0880047310.01.T01:intron 45.0%
! AAGCCTTATCCCACTAAGTG+AGG + Chr8:84453260-84453279 None:intergenic 45.0%
! AGCTGGTTGATCTTTTCCCT+CGG + Chr8:84447961-84447980 None:intergenic 45.0%
! ATAGCGAACGCGAAGTACTA+GGG - Chr8:84451299-84451318 MsG0880047310.01.T01:intron 45.0%
! ATGGGCGGTTTTGCTAGAAT+AGG + Chr8:84452026-84452045 None:intergenic 45.0%
! CGTTGCTCGCATATTGGTTA+AGG - Chr8:84451775-84451794 MsG0880047310.01.T01:intron 45.0%
! CTTTGCACGGGTATAGGTTT+TGG - Chr8:84448771-84448790 MsG0880047310.01.T01:intron 45.0%
! GAAGGCAGAGATTTGATTCG+AGG + Chr8:84451606-84451625 None:intergenic 45.0%
! GATGCCACATGTGCATTTTG+TGG + Chr8:84450173-84450192 None:intergenic 45.0%
! GATGCTTTTCACCTTTGCAC+GGG - Chr8:84448759-84448778 MsG0880047310.01.T01:intron 45.0%
! TCGTTCTTTTCCCTTGTGAG+TGG - Chr8:84451272-84451291 MsG0880047310.01.T01:intron 45.0%
! TGAGCTTAGCTCAGTTGGTA+GGG + Chr8:84449174-84449193 None:intergenic 45.0%
!! AAAGCAACTTCTGGTTTGCC+AGG - Chr8:84448452-84448471 MsG0880047310.01.T01:intron 45.0%
!! AGTTGGCTACTTGGTGTTCA+AGG + Chr8:84454125-84454144 None:intergenic 45.0%
!! CTTTTTGATTCCGGAACGTG+TGG - Chr8:84452505-84452524 MsG0880047310.01.T01:intron 45.0%
!! GAAAGGAGTATCTTGCCAAG+AGG - Chr8:84449300-84449319 MsG0880047310.01.T01:intron 45.0%
!! GGCATTTATGCCACTTTCTC+TGG - Chr8:84448901-84448920 MsG0880047310.01.T01:intron 45.0%
!! GTGTCCCTTGATTTTTCAGC+TGG + Chr8:84447978-84447997 None:intergenic 45.0%
!! TCAGCTATCTTGGCTCTGTT+TGG + Chr8:84452403-84452422 None:intergenic 45.0%
!!! AGCCTCCTTTGTTTTCCTAC+TGG + Chr8:84449385-84449404 None:intergenic 45.0%
!!! CTCCTTTGTTTTCCTACTGG+AGG + Chr8:84449382-84449401 None:intergenic 45.0%
!!! GGGGTTGTCACTTTTGCAAA+AGG + Chr8:84450041-84450060 None:intergenic 45.0%
!!! GGTATCTGCTTTTTGTACCG+AGG - Chr8:84448050-84448069 MsG0880047310.01.T01:intron 45.0%
ACAACAGCAAGGACAAGGAC+AGG - Chr8:84451396-84451415 MsG0880047310.01.T01:intron 50.0%
ACCAAGTAGCCAACTCTGGT+TGG - Chr8:84454130-84454149 MsG0880047310.01.T01:intron 50.0%
ACCTCAGCAAGCACAGTTCT+AGG + Chr8:84453646-84453665 None:intergenic 50.0%
AGGTTCATCACCAGAAGAGC+AGG + Chr8:84449047-84449066 None:intergenic 50.0%
ATACCTGGTAGAGGCGAAGA+AGG + Chr8:84451624-84451643 None:intergenic 50.0%
ATTGAGAAAAGCCAGGGGAC+GGG - Chr8:84454156-84454175 MsG0880047310.01.T01:intron 50.0%
CCAACTGAGCTAAGCTCATG+AGG - Chr8:84449176-84449195 MsG0880047310.01.T01:intron 50.0%
CCAAGTAGCCAACTCTGGTT+GGG - Chr8:84454131-84454150 MsG0880047310.01.T01:intron 50.0%
CCTCATGAGCTTAGCTCAGT+TGG + Chr8:84449179-84449198 None:intergenic 50.0%
CTAACTTGGGTCGTACTGTC+TGG + Chr8:84448081-84448100 None:intergenic 50.0%
CTGGAAGGTTTCGTCAGTTC+TGG - Chr8:84452988-84453007 MsG0880047310.01.T01:intron 50.0%
GAACACCAAGTAGCCAACTC+TGG - Chr8:84454126-84454145 MsG0880047310.01.T01:intron 50.0%
GAATGCTAGTCCTGCTCTTC+TGG - Chr8:84449034-84449053 MsG0880047310.01.T01:intron 50.0%
GAGCCATCGTTACCCATTGT+TGG - Chr8:84452048-84452067 MsG0880047310.01.T01:intron 50.0%
GAGCTGTTCGACAGTGTAAG+CGG + Chr8:84451428-84451447 None:intergenic 50.0%
GATTTGATTGCCGCGAAGCA+GGG + Chr8:84448323-84448342 None:intergenic 50.0%
GCCGTACAAGTACAACAGCA+AGG - Chr8:84451385-84451404 MsG0880047310.01.T01:intron 50.0%
GGATTTGAGCAGGCAATCCA+AGG - Chr8:84453580-84453599 MsG0880047310.01.T01:intron 50.0%
GTAAACTTACAGCCGAGGAG+AGG - Chr8:84449330-84449349 MsG0880047310.01.T01:intron 50.0%
TGACCCCCAATCGAACTGTT+TGG + Chr8:84452191-84452210 None:intergenic 50.0%
TGATTTGATTGCCGCGAAGC+AGG + Chr8:84448324-84448343 None:intergenic 50.0%
! GATAGCGAACGCGAAGTACT+AGG - Chr8:84451298-84451317 MsG0880047310.01.T01:intron 50.0%
! TCCTAGAACTGTGCTTGCTG+AGG - Chr8:84453642-84453661 MsG0880047310.01.T01:intron 50.0%
! TGGTTGATCTTTTCCCTCGG+TGG + Chr8:84447958-84447977 None:intergenic 50.0%
!! ATGGGTAACGATGGCTCTGA+TGG + Chr8:84452045-84452064 None:intergenic 50.0%
!! GAGCACTGAGGTTCTGCATA+AGG - Chr8:84447809-84447828 MsG0880047310.01.T01:intron 50.0%
!! TGGGTAACGATGGCTCTGAT+GGG + Chr8:84452044-84452063 None:intergenic 50.0%
CCCAACCAGAGTTGGCTACT+TGG + Chr8:84454134-84454153 None:intergenic 55.0%
CCTCGAACACCGGCATTCAT+CGG + Chr8:84450076-84450095 None:intergenic 55.0%
CGATAAGAGAGAGGCGAGCA+AGG + Chr8:84448163-84448182 None:intergenic 55.0%
CGTGTAACTGGGAAGCCTTG+CGG - Chr8:84453312-84453331 MsG0880047310.01.T01:intron 55.0%
CTGCAGACTCAGTTTCGGCA+AGG - Chr8:84449065-84449084 MsG0880047310.01.T01:intron 55.0%
CTTGCCGAAACTGAGTCTGC+AGG + Chr8:84449067-84449086 None:intergenic 55.0%
GAGCCCCTCAAGTGGATAGT+AGG + Chr8:84450782-84450801 None:intergenic 55.0%
GCATAGAGATACCCCGCGAA+AGG - Chr8:84448257-84448276 MsG0880047310.01.T01:CDS 55.0%
TGGAGCTGGCATAGCCATGA+GGG + Chr8:84452468-84452487 None:intergenic 55.0%
! AGGATGCAAACCGAGCACTG+AGG - Chr8:84447797-84447816 MsG0880047310.01.T01:intron 55.0%
! CATAGGCTGAAGTCTGGAGC+TGG + Chr8:84452482-84452501 None:intergenic 55.0%
! CGTACTGTCTGGAGTCTCCT+CGG + Chr8:84448070-84448089 None:intergenic 55.0%
! GATCTTTTCCCTCGGTGGTC+TGG + Chr8:84447953-84447972 None:intergenic 55.0%
! TTTTCCCTCGGTGGTCTGGT+CGG + Chr8:84447949-84447968 None:intergenic 55.0%
!! GTAACGATGGCTCTGATGGG+CGG + Chr8:84452041-84452060 None:intergenic 55.0%
!! TGCCACTTTCTCTGGTGCAC+CGG - Chr8:84448909-84448928 MsG0880047310.01.T01:intron 55.0%
AATGCCGACCAGACCACCGA+GGG - Chr8:84447942-84447961 MsG0880047310.01.T01:intron 60.0%
CCGATGAATGCCGGTGTTCG+AGG - Chr8:84450073-84450092 MsG0880047310.01.T01:intron 60.0%
CTGCCTTCTTCGCCTCTACC+AGG - Chr8:84451618-84451637 MsG0880047310.01.T01:intron 60.0%
CTGGAGCTGGCATAGCCATG+AGG + Chr8:84452469-84452488 None:intergenic 60.0%
GGGAAGATAGCCCTGCTTCG+CGG - Chr8:84448310-84448329 MsG0880047310.01.T01:intron 60.0%
GTCCGGTGCACCAGAGAAAG+TGG + Chr8:84448914-84448933 None:intergenic 60.0%
TCCACTTGAGGGGCTCAACC+TGG - Chr8:84450786-84450805 MsG0880047310.01.T01:intron 60.0%
TCGGCAGTTGCAACTCTGCG+AGG - Chr8:84447777-84447796 MsG0880047310.01.T01:CDS 60.0%
! TCCAGGTTGAGCCCCTCAAG+TGG + Chr8:84450790-84450809 None:intergenic 60.0%
GAATGCCGACCAGACCACCG+AGG - Chr8:84447941-84447960 MsG0880047310.01.T01:intron 65.0%
! CGATGAGTTGACCCGTCCCC+TGG + Chr8:84454170-84454189 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 84447420 84454466 84447420 ID=MsG0880047310.01;Name=MsG0880047310.01
Chr8 mRNA 84447420 84454466 84447420 ID=MsG0880047310.01.T01;Parent=MsG0880047310.01;Name=MsG0880047310.01.T01;_AED=0.45;_eAED=0.45;_QI=0|0.4|0.5|1|0.4|0.5|6|176|209
Chr8 exon 84447420 84447799 84447420 ID=MsG0880047310.01.T01:exon:355;Parent=MsG0880047310.01.T01
Chr8 exon 84448223 84448327 84448223 ID=MsG0880047310.01.T01:exon:354;Parent=MsG0880047310.01.T01
Chr8 exon 84449360 84449422 84449360 ID=MsG0880047310.01.T01:exon:353;Parent=MsG0880047310.01.T01
Chr8 exon 84450090 84450140 84450090 ID=MsG0880047310.01.T01:exon:352;Parent=MsG0880047310.01.T01
Chr8 exon 84454192 84454296 84454192 ID=MsG0880047310.01.T01:exon:351;Parent=MsG0880047310.01.T01
Chr8 exon 84454365 84454466 84454365 ID=MsG0880047310.01.T01:exon:350;Parent=MsG0880047310.01.T01
Chr8 CDS 84454365 84454466 84454365 ID=MsG0880047310.01.T01:cds;Parent=MsG0880047310.01.T01
Chr8 CDS 84454192 84454296 84454192 ID=MsG0880047310.01.T01:cds;Parent=MsG0880047310.01.T01
Chr8 CDS 84450090 84450140 84450090 ID=MsG0880047310.01.T01:cds;Parent=MsG0880047310.01.T01
Chr8 CDS 84449360 84449422 84449360 ID=MsG0880047310.01.T01:cds;Parent=MsG0880047310.01.T01
Chr8 CDS 84448223 84448327 84448223 ID=MsG0880047310.01.T01:cds;Parent=MsG0880047310.01.T01
Chr8 CDS 84447596 84447799 84447596 ID=MsG0880047310.01.T01:cds;Parent=MsG0880047310.01.T01
Chr8 three_prime_UTR 84447420 84447595 84447420 ID=MsG0880047310.01.T01:three_prime_utr;Parent=MsG0880047310.01.T01
Gene Sequence

>MsG0880047310.01.T01

ATGGAAATTGCAGATGGAAAAGGATATGGAAGATCTGAGGCGACAGAGAGACTTGCGCAATGTCAACTTGATCTTGAAAGAAAAGCGAATAAAGTTCAGAAGGGATCAAGTGATTACGGACCCTCTAGTCAAGTTGTCAGATGTCTTTCTTTTGCTGAGGAAAATGAATTAGCTATCGGTAAACATACTCCAGAGAGAATGGAAACATTTGAACCTGAGAAAATGAGTTCTCAGATCGTTGCTCGCATATTGGTTAAGGCCCTCATGGCTATGCCAGCTCCAGACTTCAGCCTATGTCTCTTTTTGATTCCGGAACGTGTGCTTACTTTAGAAATTATTGCAGGATTTGAGCAGGCAATCCAAGGCTATGCGATTCATGTTCTATCCTTGACTTACCAAAAGATTCCTAGAACTGTGCTTGCTGAGGCTATCAATGTAGAAGGTTTATCCTTGGACAAATTCCTTGAACACCAAGTAGCCAACTCTGGTTGGGTTATTGAGAAAAGCCAGGGGACGGGTCAACTCATCGTCCTTCCCAGAAATGAATTTAATGATCCAATTTTGAAGAAAAACACTGCAGATAGTGTACCATTGGAGCACATTAGACGGATCTTTCCTATTCTTAGCTGA
Protein sequence

>MsG0880047310.01.T01

MEIADGKGYGRSEATERLAQCQLDLERKANKVQKGSSDYGPSSQVVRCLSFAEENELAIGKHTPERMETFEPEKMSSQIVARILVKALMAMPAPDFSLCLFLIPERVLTLEIIAGFEQAIQGYAIHVLSLTYQKIPRTVLAEAINVEGLSLDKFLEHQVANSGWVIEKSQGTGQLIVLPRNEFNDPILKKNTADSVPLEHIRRIFPILS*