AlfalfaGEDB | MsG0680035389.01

M. sativa cultivar ZhongmuNo.1 / MsG0680035389.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680035389.01.T01	KEH27862.1	80.102	196	35	1	5	196	1	196	3.14E-104	308

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680035389.01.T01	A0A072UE36	80.102	196	35	1	5	196	1	196	1.50e-104	308

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048058.01	MsG0680035389.01	0.810769	9.775046e-51	5.944745e-48
MsG0180000065.01	MsG0680035389.01	0.820894	5.389185e-53	4.318684e-50
MsG0180000555.01	MsG0680035389.01	0.807831	4.171314e-50	2.347195e-47
MsG0180000741.01	MsG0680035389.01	0.810699	1.012256e-50	6.144588e-48
MsG0180000821.01	MsG0680035389.01	0.818000	2.462713e-52	1.821341e-49
MsG0180001566.01	MsG0680035389.01	0.822611	2.159089e-53	1.816349e-50
MsG0180002071.01	MsG0680035389.01	0.817739	2.821309e-52	2.071678e-49
MsG0180002870.01	MsG0680035389.01	0.803392	3.563637e-49	1.788668e-46
MsG0180002952.01	MsG0680035389.01	0.819870	9.253250e-53	7.207105e-50
MsG0180004272.01	MsG0680035389.01	0.801873	7.330643e-49	3.539793e-46
MsG0180004372.01	MsG0680035389.01	0.800823	1.203121e-48	5.656855e-46
MsG0180004388.01	MsG0680035389.01	0.808585	2.880832e-50	1.653511e-47
MsG0180005371.01	MsG0680035389.01	0.800199	1.611941e-48	7.460062e-46
MsG0180005493.01	MsG0680035389.01	0.800026	1.747890e-48	8.053995e-46
MsG0180006023.01	MsG0680035389.01	0.839258	1.764194e-57	2.422826e-54
MsG0180006235.01	MsG0680035389.01	0.807563	4.754672e-50	2.656812e-47
MsG0280010614.01	MsG0680035389.01	0.802480	5.499168e-49	2.696623e-46
MsG0280010816.01	MsG0680035389.01	0.801828	7.489419e-49	3.612186e-46
MsG0280011293.01	MsG0680035389.01	0.800066	1.715256e-48	7.911793e-46
MsG0280011334.01	MsG0680035389.01	0.818439	1.959155e-52	1.466688e-49
MsG0380012020.01	MsG0680035389.01	0.813361	2.661834e-51	1.734718e-48
MsG0380014118.01	MsG0680035389.01	0.804951	1.688303e-49	8.821417e-47
MsG0380014576.01	MsG0680035389.01	0.804560	2.037426e-49	1.053789e-46
MsG0680030740.01	MsG0680035389.01	0.803471	3.430701e-49	1.725487e-46
MsG0680031114.01	MsG0680035389.01	0.812506	4.096858e-51	2.609630e-48
MsG0680032203.01	MsG0680035389.01	0.803297	3.728806e-49	1.866975e-46
MsG0680032801.01	MsG0680035389.01	0.808504	2.998888e-50	1.717660e-47
MsG0680033379.01	MsG0680035389.01	0.824725	6.907273e-54	6.169759e-51
MsG0680034757.01	MsG0680035389.01	0.808513	2.985310e-50	1.710267e-47
MsG0680035048.01	MsG0680035389.01	0.811641	6.324959e-51	3.935939e-48
MsG0680035389.01	MsG0780036630.01	0.810162	1.322333e-50	7.913054e-48
MsG0680035389.01	MsG0780036633.01	0.802486	5.483106e-49	2.689141e-46
MsG0680035389.01	MsG0780036950.01	0.810969	8.849909e-51	5.411211e-48
MsG0680035389.01	MsG0780037515.01	0.808777	2.621816e-50	1.512344e-47
MsG0680035389.01	MsG0780037975.01	0.809129	2.204535e-50	1.283749e-47
MsG0680035389.01	MsG0780039452.01	0.811879	5.613814e-51	3.515683e-48
MsG0680035389.01	MsG0780039655.01	0.808617	2.836611e-50	1.629393e-47
MsG0680035389.01	MsG0780039737.01	0.802159	6.403664e-49	3.114630e-46
MsG0680035389.01	MsG0780040377.01	0.807786	4.263833e-50	2.396487e-47
MsG0680035389.01	MsG0780040488.01	0.814286	1.664793e-51	1.112472e-48
MsG0680035389.01	MsG0780040788.01	0.828636	8.053208e-55	8.050691e-52
MsG0680035389.01	MsG0780040947.01	0.822406	2.410254e-53	2.015678e-50
MsG0680035389.01	MsG0780041376.01	0.827677	1.371114e-54	1.332860e-51
MsG0680035389.01	MsG0780041671.01	0.811168	8.012077e-51	4.924191e-48
MsG0680035389.01	MsG0780041754.01	0.803500	3.384619e-49	1.703601e-46
MsG0680035389.01	MsG0880041969.01	0.811117	8.217298e-51	5.043671e-48
MsG0680035389.01	MsG0880042078.01	0.802677	5.008718e-49	2.468449e-46
MsG0680035389.01	MsG0880043625.01	0.804774	1.837895e-49	9.559115e-47
MsG0680035389.01	MsG0880044075.01	0.825001	5.945183e-54	5.352457e-51
MsG0680035389.01	MsG0880044477.01	0.801978	6.977883e-49	3.378065e-46
MsG0680035389.01	MsG0880044542.01	0.816800	4.588136e-52	3.283314e-49
MsG0680035389.01	MsG0880044546.01	0.812520	4.067661e-51	2.591985e-48
MsG0680035389.01	MsG0880044554.01	0.812858	3.431058e-51	2.205652e-48
MsG0680035389.01	MsG0880045583.01	0.819297	1.250711e-52	9.586231e-50
MsG0680035389.01	MsG0880046027.01	0.803491	3.399342e-49	1.710595e-46
MsG0680035389.01	MsG0880046047.01	0.803415	3.523794e-49	1.769765e-46
MsG0680035389.01	MsG0880046669.01	0.809857	1.537649e-50	9.128836e-48
MsG0680035389.01	MsG0880046762.01	0.825024	5.874227e-54	5.291868e-51
MsG0680035389.01	MsG0880047191.01	0.829159	6.015231e-55	6.106452e-52
MsG0480018637.01	MsG0680035389.01	0.802086	6.628106e-49	3.217818e-46
MsG0480019336.01	MsG0680035389.01	0.828061	1.108504e-54	1.089797e-51
MsG0480020242.01	MsG0680035389.01	0.821541	3.823150e-53	3.119286e-50
MsG0480020331.01	MsG0680035389.01	0.817047	4.036933e-52	2.908732e-49
MsG0480021778.01	MsG0680035389.01	0.810913	9.097308e-51	5.554109e-48
MsG0480021784.01	MsG0680035389.01	0.800445	1.436818e-48	6.691336e-46
MsG0480021900.01	MsG0680035389.01	0.822328	2.512308e-53	2.096247e-50
MsG0480022026.01	MsG0680035389.01	0.809131	2.201712e-50	1.282184e-47
MsG0480022115.01	MsG0680035389.01	0.805630	1.216448e-49	6.467592e-47
MsG0480022259.01	MsG0680035389.01	0.815383	9.506838e-52	6.544694e-49
MsG0480022262.01	MsG0680035389.01	0.815670	8.205966e-52	5.693938e-49
MsG0480022552.01	MsG0680035389.01	0.801570	8.458282e-49	4.052834e-46
MsG0480022597.01	MsG0680035389.01	0.810244	1.269029e-50	7.610658e-48
MsG0480022598.01	MsG0680035389.01	0.805538	1.271947e-49	6.746391e-47
MsG0480023427.01	MsG0680035389.01	0.831324	1.780798e-55	1.925927e-52
MsG0480023718.01	MsG0680035389.01	0.816281	5.995817e-52	4.230567e-49
MsG0480023873.01	MsG0680035389.01	0.801749	7.775266e-49	3.742320e-46
MsG0580024157.01	MsG0680035389.01	0.830665	2.583819e-55	2.740505e-52
MsG0580024618.01	MsG0680035389.01	0.809510	1.825602e-50	1.073917e-47
MsG0580024632.01	MsG0680035389.01	0.808008	3.824916e-50	2.162367e-47
MsG0580024960.01	MsG0680035389.01	0.811845	5.710739e-51	3.573141e-48
MsG0580025907.01	MsG0680035389.01	0.809753	1.618862e-50	9.585262e-48
MsG0380016483.01	MsG0680035389.01	0.802474	5.515483e-49	2.704210e-46
MsG0380016941.01	MsG0680035389.01	0.834285	3.274390e-56	3.868198e-53
MsG0380017177.01	MsG0680035389.01	0.809286	2.039989e-50	1.192907e-47
MsG0380017232.01	MsG0680035389.01	0.831978	1.228748e-55	1.354999e-52
MsG0380017233.01	MsG0680035389.01	0.817622	2.997779e-52	2.194093e-49
MsG0380017631.01	MsG0680035389.01	0.801289	9.659902e-49	4.595964e-46
MsG0580027129.01	MsG0680035389.01	0.812410	4.299091e-51	2.731570e-48
MsG0580027628.01	MsG0680035389.01	0.860409	2.106981e-63	5.753701e-60
MsG0580027687.01	MsG0680035389.01	0.814585	1.429697e-51	9.631235e-49
MsG0580027688.01	MsG0680035389.01	0.822955	1.795396e-53	1.524992e-50
MsG0580027745.01	MsG0680035389.01	0.808967	2.387571e-50	1.384243e-47
MsG0580029554.01	MsG0680035389.01	0.819017	1.448438e-52	1.101792e-49
MsG0680030316.01	MsG0680035389.01	0.810273	1.251146e-50	7.508881e-48
MsG0680030321.01	MsG0680035389.01	0.804687	1.916540e-49	9.945600e-47
MsG0680030667.01	MsG0680035389.01	0.812310	4.521086e-51	2.864739e-48
MsG0680030672.01	MsG0680035389.01	0.805447	1.328848e-49	7.031989e-47
MsG0680030684.01	MsG0680035389.01	0.819303	1.246950e-52	9.558784e-50
MsG0680030685.01	MsG0680035389.01	0.814630	1.397094e-51	9.423307e-49
MsG0280006692.01	MsG0680035389.01	0.806612	7.558692e-50	4.120825e-47
MsG0280006728.01	MsG0680035389.01	0.811859	5.669210e-51	3.548508e-48
MsG0280007484.01	MsG0680035389.01	0.807518	4.861500e-50	2.713470e-47
MsG0280008270.01	MsG0680035389.01	0.807103	5.951168e-50	3.285812e-47
MsG0280008615.01	MsG0680035389.01	0.816424	5.570385e-52	3.945395e-49
MsG0280008907.01	MsG0680035389.01	0.802933	4.433395e-49	2.199240e-46
MsG0280008970.01	MsG0680035389.01	0.804403	2.197116e-49	1.131772e-46
MsG0280009813.01	MsG0680035389.01	0.808679	2.751070e-50	1.582870e-47
MsG0280010389.01	MsG0680035389.01	0.823956	1.047740e-53	9.154729e-51

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680035389.01.T01	MTR_5g044895	80.102	196	35	1	5	196	1	196	3.81e-108	308
MsG0680035389.01.T01	MTR_5g072370	79.082	196	37	1	5	196	1	196	6.58e-107	305
MsG0680035389.01.T01	MTR_6g043270	77.551	196	40	1	5	196	1	196	2.12e-103	296
MsG0680035389.01.T01	MTR_3g028620	75.000	196	45	1	5	196	1	196	7.80e-103	295
MsG0680035389.01.T01	MTR_3g060830	75.000	196	45	1	5	196	1	196	1.96e-102	293
MsG0680035389.01.T01	MTR_7g061620	73.469	196	48	1	5	196	1	196	7.87e-102	292
MsG0680035389.01.T01	MTR_5g067630	75.510	196	44	1	5	196	1	196	1.81e-100	288
MsG0680035389.01.T01	MTR_7g061360	72.449	196	50	1	5	196	1	196	3.64e-100	288
MsG0680035389.01.T01	MTR_5g063995	75.510	196	44	1	5	196	1	196	5.53e-100	287
MsG0680035389.01.T01	MTR_5g009790	73.980	196	47	1	5	196	1	196	3.01e-98	288
MsG0680035389.01.T01	MTR_4g045603	71.939	196	51	1	5	196	1	196	4.83e-98	282
MsG0680035389.01.T01	MTR_8g470030	72.449	196	50	1	5	196	1	196	1.96e-96	278
MsG0680035389.01.T01	MTR_0005s0220	70.918	196	53	1	5	196	1	196	1.62e-95	276
MsG0680035389.01.T01	MTR_2g058650	69.898	196	55	1	5	196	1	196	9.22e-94	271
MsG0680035389.01.T01	MTR_0083s0070	77.143	175	36	1	26	196	1	175	3.31e-93	270
MsG0680035389.01.T01	MTR_1g036730	68.500	200	59	1	1	196	1	200	3.34e-93	270
MsG0680035389.01.T01	MTR_0360s0010	76.404	178	35	2	26	196	1	178	3.31e-91	265
MsG0680035389.01.T01	MTR_0214s0030	76.571	175	37	1	26	196	1	175	9.24e-91	263
MsG0680035389.01.T01	MTR_8g466300	74.719	178	41	1	23	196	12	189	1.07e-89	261
MsG0680035389.01.T01	MTR_5g048800	74.857	175	40	1	26	196	1	175	5.87e-89	259
MsG0680035389.01.T01	MTR_4g069290	66.000	200	60	2	5	196	1	200	2.42e-86	253
MsG0680035389.01.T01	MTR_2g061240	74.522	157	40	0	40	196	2	158	1.49e-82	242
MsG0680035389.01.T01	MTR_2g083590	60.500	200	74	2	1	196	1	199	3.10e-81	240
MsG0680035389.01.T01	MTR_5g053480	60.000	200	75	2	1	196	1	199	1.99e-78	233
MsG0680035389.01.T01	MTR_4g054700	72.258	155	43	0	42	196	9	163	1.85e-77	229
MsG0680035389.01.T01	MTR_3g033840	74.194	155	36	1	14	164	2	156	4.24e-77	228
MsG0680035389.01.T01	MTR_5g055710	79.562	137	28	0	60	196	10	146	1.37e-75	224
MsG0680035389.01.T01	MTR_7g051090	66.471	170	53	1	31	196	1	170	2.91e-75	224
MsG0680035389.01.T01	MTR_6g036940	57.895	209	70	3	1	191	1	209	3.18e-74	223
MsG0680035389.01.T01	MTR_6g042710	66.471	170	53	1	31	196	1	170	9.65e-74	220
MsG0680035389.01.T01	MTR_0520s0020	74.074	135	35	0	62	196	1	135	3.36e-69	207
MsG0680035389.01.T01	MTR_7g055890	53.000	200	86	2	5	196	1	200	1.93e-68	207
MsG0680035389.01.T01	MTR_5g080380	63.699	146	49	1	31	172	1	146	4.74e-60	184
MsG0680035389.01.T01	MTR_8g479440	78.814	118	25	0	47	164	38	155	7.45e-60	184
MsG0680035389.01.T01	MTR_7g056780	62.069	145	53	2	53	196	18	161	8.48e-57	177
MsG0680035389.01.T01	MTR_6g044850	65.833	120	41	0	77	196	1	120	1.12e-52	165
MsG0680035389.01.T01	MTR_3g117535	76.238	101	24	0	96	196	9	109	9.79e-50	157
MsG0680035389.01.T01	MTR_4g061900	57.353	136	54	1	5	136	23	158	1.84e-48	155
MsG0680035389.01.T01	MTR_1g053405	66.667	114	34	1	1	110	24	137	4.31e-48	154
MsG0680035389.01.T01	MTR_3g034005	82.222	90	16	0	107	196	1	90	9.46e-48	151
MsG0680035389.01.T01	MTR_6g466390	70.103	97	27	1	54	150	23	117	1.16e-43	143
MsG0680035389.01.T01	MTR_0134s0030	80.000	90	18	0	107	196	1	90	1.19e-43	141
MsG0680035389.01.T01	MTR_3g034000	69.697	99	26	1	5	99	1	99	5.02e-42	137
MsG0680035389.01.T01	MTR_5g084150	52.419	124	59	0	73	196	64	187	6.06e-42	140
MsG0680035389.01.T01	MTR_4g022300	60.000	110	40	1	14	119	2	111	2.01e-39	131
MsG0680035389.01.T01	MTR_8g075640	67.045	88	25	1	5	88	1	88	2.21e-35	120
MsG0680035389.01.T01	MTR_4g026610	42.857	84	36	1	59	130	1	84	2.56e-15	68.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 35 sgRNAs with CRISPR-Local

Find 38 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GATTCTTTATGCCAAATTTA+TGG	0.109985	6:+104383897	MsG0680035389.01.T01:CDS
TGGTAGGAATTCCATAAATT+TGG	0.195147	6:-104383908	None:intergenic
ACCTCCGTTGGTTCAGATTT+GGG	0.270309	6:-104383778	None:intergenic
AACCTCCGTTGGTTCAGATT+TGG	0.272943	6:-104383779	None:intergenic
CCCTTCTTCTTCCTCTTGTT+TGG	0.286620	6:-104383928	None:intergenic
ATATCAACACTCCTCACTTT+AGG	0.299517	6:-104383751	None:intergenic
ATGAACCATGTCCTTCTCTA+AGG	0.359274	6:+104383824	MsG0680035389.01.T01:CDS
TCAAAGGAAGTTGGTTAAGA+TGG	0.389442	6:+104383693	MsG0680035389.01.T01:CDS
TCTTCTTCCTCTTGTTTGGT+AGG	0.402332	6:-104383924	None:intergenic
AAAAGTATATGTTATCTTTG+AGG	0.408804	6:+104383461	MsG0680035389.01.T01:CDS
CTCGAAATGTGATCTTTATG+AGG	0.454970	6:+104383507	MsG0680035389.01.T01:CDS
AAAGATTAACAGTGAGTGCA+TGG	0.502818	6:+104383866	MsG0680035389.01.T01:CDS
ATTATTTCTTTAACCTCCGT+TGG	0.505498	6:-104383790	None:intergenic
TTCCCTTCACAAGTACTACA+TGG	0.515262	6:-104383538	None:intergenic
CCTCCGTTGGTTCAGATTTG+GGG	0.515806	6:-104383777	None:intergenic
CAATCTCTTTAGTGTGATAG+AGG	0.523845	6:-104383423	None:intergenic
CAACCATGTAGTACTTGTGA+AGG	0.533976	6:+104383535	MsG0680035389.01.T01:CDS
AACCATGTCCTTCTCTAAGG+TGG	0.545502	6:+104383827	MsG0680035389.01.T01:CDS
ACCAAACAAGAGGAAGAAGA+AGG	0.555431	6:+104383927	MsG0680035389.01.T01:CDS
GACAAAGTGTCACAAGGTTG+TGG	0.565641	6:+104383717	MsG0680035389.01.T01:CDS
CGCCTCAACCACTGTTAGGG+TGG	0.572270	6:-104383976	None:intergenic
AAGCTCTCCCACCTTAGAGA+AGG	0.586500	6:-104383835	None:intergenic
TGGAATTCCTACCAAACAAG+AGG	0.587443	6:+104383917	MsG0680035389.01.T01:CDS
ACCATGTCCTTCTCTAAGGT+GGG	0.597882	6:+104383828	MsG0680035389.01.T01:CDS
AAGATTAACAGTGAGTGCAT+GGG	0.602478	6:+104383867	MsG0680035389.01.T01:CDS
TTTCCCCAAATCTGAACCAA+CGG	0.603568	6:+104383774	MsG0680035389.01.T01:CDS
AACCATGTAGTACTTGTGAA+GGG	0.618251	6:+104383536	MsG0680035389.01.T01:CDS
AAAGTGTCACAAGGTTGTGG+TGG	0.619032	6:+104383720	MsG0680035389.01.T01:CDS
TACTTGTGAAGGGAAGAAAG+AGG	0.633285	6:+104383546	MsG0680035389.01.T01:CDS
CCCCAAATCTGAACCAACGG+AGG	0.636208	6:+104383777	MsG0680035389.01.T01:CDS
CCAAACAAGAGGAAGAAGAA+GGG	0.638840	6:+104383928	MsG0680035389.01.T01:CDS
TGGAAGAAAATCCTAAAGTG+AGG	0.673536	6:+104383740	MsG0680035389.01.T01:CDS
GATGGAGACAAAGTGTCACA+AGG	0.686946	6:+104383711	MsG0680035389.01.T01:CDS
GAGAAGTATGATGTTCAGTG+TGG	0.713473	6:+104383643	MsG0680035389.01.T01:CDS
TCCCACCTTAGAGAAGGACA+TGG	0.722143	6:-104383829	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAAAGTATATGTTATCTTTG+AGG	+	Chr6:104383461-104383480	MsG0680035389.01.T01:CDS	20.0%
!!!	ATCTTTGAGGATAAAAATTT+TGG	+	Chr6:104383474-104383493	MsG0680035389.01.T01:CDS	20.0%
!	GATTCTTTATGCCAAATTTA+TGG	+	Chr6:104383897-104383916	MsG0680035389.01.T01:CDS	25.0%
	TGGTAGGAATTCCATAAATT+TGG	-	Chr6:104383911-104383930	None:intergenic	30.0%
!	ACATGATTTTCAAAGGAAGT+TGG	+	Chr6:104383684-104383703	MsG0680035389.01.T01:CDS	30.0%
!	ATTATTTCTTTAACCTCCGT+TGG	-	Chr6:104383793-104383812	None:intergenic	30.0%
!!	AGAAAGCACATGATTTTCAA+AGG	+	Chr6:104383677-104383696	MsG0680035389.01.T01:CDS	30.0%
	AAAGATTAACAGTGAGTGCA+TGG	+	Chr6:104383866-104383885	MsG0680035389.01.T01:CDS	35.0%
	AACCATGTAGTACTTGTGAA+GGG	+	Chr6:104383536-104383555	MsG0680035389.01.T01:CDS	35.0%
	AAGATTAACAGTGAGTGCAT+GGG	+	Chr6:104383867-104383886	MsG0680035389.01.T01:CDS	35.0%
	ATATCAACACTCCTCACTTT+AGG	-	Chr6:104383754-104383773	None:intergenic	35.0%
	CAATCTCTTTAGTGTGATAG+AGG	-	Chr6:104383426-104383445	None:intergenic	35.0%
	CTCGAAATGTGATCTTTATG+AGG	+	Chr6:104383507-104383526	MsG0680035389.01.T01:CDS	35.0%
	TGGAAGAAAATCCTAAAGTG+AGG	+	Chr6:104383740-104383759	MsG0680035389.01.T01:CDS	35.0%
!	TCAAAGGAAGTTGGTTAAGA+TGG	+	Chr6:104383693-104383712	MsG0680035389.01.T01:CDS	35.0%
	ACCAAACAAGAGGAAGAAGA+AGG	+	Chr6:104383927-104383946	MsG0680035389.01.T01:CDS	40.0%
	AGGGTGGCAAAAATGATAGA+AGG	-	Chr6:104383963-104383982	None:intergenic	40.0%
	ATGAACCATGTCCTTCTCTA+AGG	+	Chr6:104383824-104383843	MsG0680035389.01.T01:CDS	40.0%
	CAACCATGTAGTACTTGTGA+AGG	+	Chr6:104383535-104383554	MsG0680035389.01.T01:CDS	40.0%
	CCAAACAAGAGGAAGAAGAA+GGG	+	Chr6:104383928-104383947	MsG0680035389.01.T01:CDS	40.0%
	TACTTGTGAAGGGAAGAAAG+AGG	+	Chr6:104383546-104383565	MsG0680035389.01.T01:CDS	40.0%
	TGGAATTCCTACCAAACAAG+AGG	+	Chr6:104383917-104383936	MsG0680035389.01.T01:CDS	40.0%
	TTCCCTTCACAAGTACTACA+TGG	-	Chr6:104383541-104383560	None:intergenic	40.0%
	TTTCCCCAAATCTGAACCAA+CGG	+	Chr6:104383774-104383793	MsG0680035389.01.T01:CDS	40.0%
!	GAGAAGTATGATGTTCAGTG+TGG	+	Chr6:104383643-104383662	MsG0680035389.01.T01:CDS	40.0%
!	TCTTCTTCCTCTTGTTTGGT+AGG	-	Chr6:104383927-104383946	None:intergenic	40.0%
	CCCTTCTTCTTCCTCTTGTT+TGG	-	Chr6:104383931-104383950	None:intergenic	45.0%
!	AAAGTGTCACAAGGTTGTGG+TGG	+	Chr6:104383720-104383739	MsG0680035389.01.T01:CDS	45.0%
!	AACCATGTCCTTCTCTAAGG+TGG	+	Chr6:104383827-104383846	MsG0680035389.01.T01:CDS	45.0%
!	GACAAAGTGTCACAAGGTTG+TGG	+	Chr6:104383717-104383736	MsG0680035389.01.T01:CDS	45.0%
!	GATGGAGACAAAGTGTCACA+AGG	+	Chr6:104383711-104383730	MsG0680035389.01.T01:CDS	45.0%
!!	AACCTCCGTTGGTTCAGATT+TGG	-	Chr6:104383782-104383801	None:intergenic	45.0%
!!	ACCATGTCCTTCTCTAAGGT+GGG	+	Chr6:104383828-104383847	MsG0680035389.01.T01:CDS	45.0%
!!	ACCTCCGTTGGTTCAGATTT+GGG	-	Chr6:104383781-104383800	None:intergenic	45.0%
	AAGCTCTCCCACCTTAGAGA+AGG	-	Chr6:104383838-104383857	None:intergenic	50.0%
	TCCCACCTTAGAGAAGGACA+TGG	-	Chr6:104383832-104383851	None:intergenic	50.0%
!!	CCTCCGTTGGTTCAGATTTG+GGG	-	Chr6:104383780-104383799	None:intergenic	50.0%
	CCCCAAATCTGAACCAACGG+AGG	+	Chr6:104383777-104383796	MsG0680035389.01.T01:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
Chr6	gene	104383394	104383984	104383394	ID=MsG0680035389.01;Name=MsG0680035389.01
Chr6	mRNA	104383394	104383984	104383394	ID=MsG0680035389.01.T01;Parent=MsG0680035389.01;Name=MsG0680035389.01.T01;_AED=0.06;_eAED=0.06;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|196
Chr6	exon	104383394	104383984	104383394	ID=MsG0680035389.01.T01:exon:21141;Parent=MsG0680035389.01.T01
Chr6	CDS	104383394	104383984	104383394	ID=MsG0680035389.01.T01:cds;Parent=MsG0680035389.01.T01

Gene Sequence

>MsG0680035389.01.T01

ATGATAGACAGGTTAGCAGACAGATTATTCCTCTATCACACTAAAGAGATTGCTACGTTGCAGTATGAAAAGTATATGTTATCTTTGAGGATAAAAATTTTGGACGATAAAATCTCGAAATGTGATCTTTATGAGGCAAATCAACCATGTAGTACTTGTGAAGGGAAGAAAGAGGTGATCGACATAGATTACAATACTCAACTTCAAAATATTTTAGATGATTTCTTGATGACAAATCAAGTTTCATTTGAGAAGTATGATGTTCAGTGTGGTGATCTTGTTGAGAAAGCACATGATTTTCAAAGGAAGTTGGTTAAGATGGAGACAAAGTGTCACAAGGTTGTGGTGGAAGAAAATCCTAAAGTGAGGAGTGTTGATATTTTCCCCAAATCTGAACCAACGGAGGTTAAAGAAATAATTCGTGTGCAAAATGAACCATGTCCTTCTCTAAGGTGGGAGAGCTTAAATTTCAAAAGATTAACAGTGAGTGCATGGGAGTATCTGATTCTTTATGCCAAATTTATGGAATTCCTACCAAACAAGAGGAAGAAGAAGGGTGATATATTCCTTCTATCATTTTTGCCACCCTAA

Protein sequence

>MsG0680035389.01.T01

MIDRLADRLFLYHTKEIATLQYEKYMLSLRIKILDDKISKCDLYEANQPCSTCEGKKEVIDIDYNTQLQNILDDFLMTNQVSFEKYDVQCGDLVEKAHDFQRKLVKMETKCHKVVVEENPKVRSVDIFPKSEPTEVKEIIRVQNEPCPSLRWESLNFKRLTVSAWEYLILYAKFMEFLPNKRKKKGDIFLLSFLPP*