AlfalfaGEDB | MsG0580024632.01

M. sativa cultivar ZhongmuNo.1 / MsG0580024632.01

KEGG: -
GO: -
PFAM: PF02037

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580024632.01.T01	XP_004511956.1	80.328	122	22	1	1	122	1	120	1.06E-44	160

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580024632.01.T01	A0A1S2YYJ8	80.328	122	22	1	1	122	1	120	5.06e-45	160

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047912.01	MsG0580024632.01	0.826000	3.447830e-54	3.193491e-51
MsG0080047957.01	MsG0580024632.01	0.807463	4.994090e-50	2.783496e-47
MsG0080047959.01	MsG0580024632.01	0.804589	2.009355e-49	1.040058e-46
MsG0080048461.01	MsG0580024632.01	0.805403	1.357895e-49	7.177534e-47
MsG0080048856.01	MsG0580024632.01	0.804647	1.954207e-49	1.013036e-46
MsG0180000065.01	MsG0580024632.01	0.843105	1.718696e-58	2.660736e-55
MsG0180000142.01	MsG0580024632.01	0.814525	1.473855e-51	9.913123e-49
MsG0180000195.01	MsG0580024632.01	0.810468	1.135395e-50	6.849589e-48
MsG0180000271.01	MsG0580024632.01	0.812622	3.864292e-51	2.468955e-48
MsG0180000402.01	MsG0580024632.01	0.815084	1.107858e-51	7.564264e-49
MsG0180000470.01	MsG0580024632.01	0.814768	1.301812e-51	8.812638e-49
MsG0180000555.01	MsG0580024632.01	0.824532	7.671451e-54	6.813668e-51
MsG0180000741.01	MsG0580024632.01	0.814236	1.707584e-51	1.139524e-48
MsG0180000797.01	MsG0580024632.01	0.811454	6.946824e-51	4.301942e-48
MsG0180000821.01	MsG0580024632.01	0.803583	3.252500e-49	1.640680e-46
MsG0180000822.01	MsG0580024632.01	0.801664	8.091744e-49	3.886376e-46
MsG0180000836.01	MsG0580024632.01	0.811931	5.468272e-51	3.429263e-48
MsG0180000855.01	MsG0580024632.01	0.817107	3.915224e-52	2.825430e-49
MsG0180001173.01	MsG0580024632.01	0.816181	6.312265e-52	4.441507e-49
MsG0180001312.01	MsG0580024632.01	0.821886	3.180627e-53	2.620628e-50
MsG0180001566.01	MsG0580024632.01	0.810440	1.151430e-50	6.940804e-48
MsG0180001570.01	MsG0580024632.01	0.802382	5.761447e-49	2.818374e-46
MsG0180001663.01	MsG0580024632.01	0.807663	4.527582e-50	2.536520e-47
MsG0180001712.01	MsG0580024632.01	0.800408	1.461804e-48	6.801443e-46
MsG0180002071.01	MsG0580024632.01	0.839671	1.378388e-57	1.917059e-54
MsG0180002709.01	MsG0580024632.01	0.806512	7.934122e-50	4.314629e-47
MsG0180002870.01	MsG0580024632.01	0.814338	1.621119e-51	1.084826e-48
MsG0180002894.01	MsG0580024632.01	0.817795	2.740003e-52	2.015080e-49
MsG0180002952.01	MsG0580024632.01	0.856272	3.599867e-62	8.544137e-59
MsG0180003173.01	MsG0580024632.01	0.820153	7.972670e-53	6.259082e-50
MsG0180003438.01	MsG0580024632.01	0.804635	1.965131e-49	1.018360e-46
MsG0180003444.01	MsG0580024632.01	0.814676	1.364369e-51	9.213820e-49
MsG0180003854.01	MsG0580024632.01	0.800735	1.253559e-48	5.881074e-46
MsG0180004157.01	MsG0580024632.01	0.813308	2.733064e-51	1.778513e-48
MsG0180004264.01	MsG0580024632.01	0.814744	1.318114e-51	8.917632e-49
MsG0180004372.01	MsG0580024632.01	0.803735	3.025637e-49	1.532096e-46
MsG0180004388.01	MsG0580024632.01	0.837023	6.637296e-57	8.513246e-54
MsG0180004730.01	MsG0580024632.01	0.823008	1.745391e-53	1.484767e-50
MsG0180005050.01	MsG0580024632.01	0.822588	2.186302e-53	1.837939e-50
MsG0180005233.01	MsG0580024632.01	0.811529	6.688731e-51	4.150446e-48
MsG0180005304.01	MsG0580024632.01	0.814644	1.386862e-51	9.357850e-49
MsG0180006016.01	MsG0580024632.01	0.806290	8.839357e-50	4.779745e-47
MsG0180006023.01	MsG0580024632.01	0.854575	1.123373e-61	2.520195e-58
MsG0280010551.01	MsG0580024632.01	0.826585	2.502576e-54	2.356631e-51
MsG0280010614.01	MsG0580024632.01	0.813606	2.350865e-51	1.542254e-48
MsG0280011032.01	MsG0580024632.01	0.828820	7.267165e-55	7.303774e-52
MsG0280011070.01	MsG0580024632.01	0.825918	3.606843e-54	3.332981e-51
MsG0280011131.01	MsG0580024632.01	0.821668	3.572430e-53	2.925226e-50
MsG0280011285.01	MsG0580024632.01	0.800018	1.754812e-48	8.084100e-46
MsG0280011293.01	MsG0580024632.01	0.810153	1.328071e-50	7.945675e-48
MsG0280011334.01	MsG0580024632.01	0.800851	1.186847e-48	5.584769e-46
MsG0280011336.01	MsG0580024632.01	0.810847	9.401547e-51	5.729594e-48
MsG0280011410.01	MsG0580024632.01	0.807442	5.045478e-50	2.810497e-47
MsG0380011870.01	MsG0580024632.01	0.802617	5.153107e-49	2.535799e-46
MsG0380012067.01	MsG0580024632.01	0.800298	1.538826e-48	7.140137e-46
MsG0380013363.01	MsG0580024632.01	0.800634	1.314312e-48	6.150410e-46
MsG0380013834.01	MsG0580024632.01	0.830105	3.542161e-55	3.696063e-52
MsG0380014142.01	MsG0580024632.01	0.806707	7.219467e-50	3.945471e-47
MsG0380014251.01	MsG0580024632.01	0.827298	1.689961e-54	1.624924e-51
MsG0380014573.01	MsG0580024632.01	0.825096	5.646408e-54	5.097023e-51
MsG0380014770.01	MsG0580024632.01	0.801199	1.007997e-48	4.784881e-46
MsG0480018637.01	MsG0580024632.01	0.816427	5.559998e-52	3.938387e-49
MsG0480018640.01	MsG0580024632.01	0.824128	9.543895e-54	8.379302e-51
MsG0480018787.01	MsG0580024632.01	0.811019	8.628829e-51	5.283066e-48
MsG0480018970.01	MsG0580024632.01	0.810765	9.797508e-51	5.957702e-48
MsG0480019970.01	MsG0580024632.01	0.821765	3.392861e-53	2.785818e-50
MsG0480020242.01	MsG0580024632.01	0.801220	9.980122e-49	4.739948e-46
MsG0480020445.01	MsG0580024632.01	0.804005	2.658969e-49	1.355832e-46
MsG0480020559.01	MsG0580024632.01	0.807578	4.720600e-50	2.638727e-47
MsG0480020634.01	MsG0580024632.01	0.834757	2.492394e-56	2.985755e-53
MsG0480020839.01	MsG0580024632.01	0.824090	9.743155e-54	8.544701e-51
MsG0480021061.01	MsG0580024632.01	0.821979	3.026672e-53	2.500240e-50
MsG0480021240.01	MsG0580024632.01	0.809779	1.598546e-50	9.471323e-48
MsG0480021274.01	MsG0580024632.01	0.801437	9.006562e-49	4.301137e-46
MsG0480021778.01	MsG0580024632.01	0.816454	5.485472e-52	3.888377e-49
MsG0480021784.01	MsG0580024632.01	0.814210	1.730572e-51	1.153976e-48
MsG0480021853.01	MsG0580024632.01	0.812029	5.205567e-51	3.273223e-48
MsG0480021900.01	MsG0580024632.01	0.809174	2.155577e-50	1.256746e-47
MsG0480022169.01	MsG0580024632.01	0.800563	1.359394e-48	6.349709e-46
MsG0480022259.01	MsG0580024632.01	0.813619	2.335636e-51	1.532802e-48
MsG0480022480.01	MsG0580024632.01	0.808014	3.813684e-50	2.156324e-47
MsG0480022533.01	MsG0580024632.01	0.813861	2.065457e-51	1.364390e-48
MsG0480022552.01	MsG0580024632.01	0.801727	7.856404e-49	3.779307e-46
MsG0480022597.01	MsG0580024632.01	0.833816	4.290177e-56	4.997319e-53
MsG0480022598.01	MsG0580024632.01	0.810205	1.293850e-50	7.751283e-48
MsG0480022986.01	MsG0580024632.01	0.802992	4.311399e-49	2.141867e-46
MsG0480023270.01	MsG0580024632.01	0.826470	2.664824e-54	2.501343e-51
MsG0480023427.01	MsG0580024632.01	0.835903	1.279216e-56	1.586250e-53
MsG0480023554.01	MsG0580024632.01	0.807914	4.005283e-50	2.258573e-47
MsG0480023654.01	MsG0580024632.01	0.808571	2.901279e-50	1.664618e-47
MsG0480023707.01	MsG0580024632.01	0.818319	2.085172e-52	1.555709e-49
MsG0480023718.01	MsG0580024632.01	0.811128	8.175014e-51	5.019100e-48
MsG0480023873.01	MsG0580024632.01	0.819012	1.451960e-52	1.104321e-49
MsG0480024005.01	MsG0580024632.01	0.800142	1.655344e-48	7.650113e-46
MsG0580024073.01	MsG0580024632.01	0.836608	8.471372e-57	1.072920e-53
MsG0580024114.01	MsG0580024632.01	0.814530	1.469949e-51	9.888136e-49
MsG0580024157.01	MsG0580024632.01	0.811539	6.656608e-51	4.131528e-48
MsG0580024165.01	MsG0580024632.01	0.804058	2.592175e-49	1.323611e-46
MsG0580024304.01	MsG0580024632.01	0.823859	1.103863e-53	9.619033e-51
MsG0580024632.01	MsG0580024733.01	0.830118	3.515456e-55	3.669696e-52
MsG0580024632.01	MsG0580024781.01	0.821668	3.572430e-53	2.925226e-50
MsG0580024632.01	MsG0580024945.01	0.820868	5.462620e-53	4.374525e-50
MsG0580024632.01	MsG0580024960.01	0.804740	1.868832e-49	9.711810e-47
MsG0580024632.01	MsG0580025008.01	0.802684	4.991738e-49	2.460558e-46
MsG0580024632.01	MsG0580025009.01	0.808262	3.377246e-50	1.922213e-47
MsG0580024632.01	MsG0580025184.01	0.804257	2.355803e-49	1.208981e-46
MsG0580024632.01	MsG0580025621.01	0.803086	4.123315e-49	2.053291e-46
MsG0580024632.01	MsG0580025758.01	0.816263	6.053077e-52	4.268811e-49
MsG0580024632.01	MsG0580025900.01	0.802284	6.034029e-49	2.944357e-46
MsG0580024632.01	MsG0580025907.01	0.810740	9.916840e-51	6.026331e-48
MsG0580024632.01	MsG0580026002.01	0.824078	9.809242e-54	8.599820e-51
MsG0580024632.01	MsG0580026023.01	0.801707	7.930559e-49	3.813071e-46
MsG0580024632.01	MsG0580027401.01	0.802990	4.315935e-49	2.143995e-46
MsG0580024632.01	MsG0580027628.01	0.833117	6.412285e-56	7.314653e-53
MsG0580024632.01	MsG0580027745.01	0.800443	1.437611e-48	6.694859e-46
MsG0580024632.01	MsG0580027926.01	0.800564	1.358571e-48	6.346044e-46
MsG0580024632.01	MsG0580029704.01	0.818253	2.158460e-52	1.607397e-49
MsG0580024632.01	MsG0680030316.01	0.807247	5.549283e-50	3.075607e-47
MsG0580024632.01	MsG0680030321.01	0.833415	5.404257e-56	6.219444e-53
MsG0580024632.01	MsG0680030667.01	0.839121	1.915239e-57	2.618972e-54
MsG0580024632.01	MsG0680030685.01	0.800920	1.149465e-48	5.418255e-46
MsG0580024632.01	MsG0680031020.01	0.832673	8.265055e-56	9.303100e-53
MsG0580024632.01	MsG0680031114.01	0.837694	4.468278e-57	5.850910e-54
MsG0580024632.01	MsG0680032095.01	0.803811	2.916505e-49	1.479748e-46
MsG0580024632.01	MsG0680032203.01	0.804506	2.090868e-49	1.079900e-46
MsG0580024632.01	MsG0680032801.01	0.810136	1.339304e-50	8.009356e-48
MsG0580024632.01	MsG0680033391.01	0.812527	4.053104e-51	2.583229e-48
MsG0580024632.01	MsG0680033392.01	0.811209	7.848446e-51	4.829077e-48
MsG0580024632.01	MsG0680034757.01	0.815243	1.021638e-51	7.005619e-49
MsG0580024632.01	MsG0680035278.01	0.812371	4.384117e-51	2.782543e-48
MsG0580024632.01	MsG0680035346.01	0.827962	1.171107e-54	1.148032e-51
MsG0580024632.01	MsG0680035389.01	0.808008	3.824916e-50	2.162367e-47
MsG0580024632.01	MsG0680035656.01	0.808808	2.582006e-50	1.490619e-47
MsG0580024632.01	MsG0680035692.01	0.814859	1.243082e-51	8.436016e-49
MsG0580024632.01	MsG0780035948.01	0.814821	1.267428e-51	8.592602e-49
MsG0580024632.01	MsG0780036018.01	0.800915	1.151895e-48	5.429088e-46
MsG0580024632.01	MsG0780036609.01	0.805942	1.046463e-49	5.608572e-47
MsG0580024632.01	MsG0780036950.01	0.845622	3.620863e-59	6.069614e-56
MsG0580024632.01	MsG0780038051.01	0.804328	2.277389e-49	1.170902e-46
MsG0580024632.01	MsG0780038386.01	0.808749	2.658106e-50	1.532187e-47
MsG0580024632.01	MsG0780038401.01	0.835428	1.687631e-56	2.063137e-53
MsG0580024632.01	MsG0780038439.01	0.802150	6.429821e-49	3.126639e-46
MsG0580024632.01	MsG0780038495.01	0.821755	3.411458e-53	2.800212e-50
MsG0580024632.01	MsG0780038602.01	0.824214	9.113612e-54	8.020844e-51
MsG0580024632.01	MsG0780039252.01	0.806433	8.244002e-50	4.474035e-47
MsG0580024632.01	MsG0780039655.01	0.812059	5.129051e-51	3.227762e-48
MsG0580024632.01	MsG0780039717.01	0.805658	1.200280e-49	6.386158e-47
MsG0580024632.01	MsG0780039845.01	0.800046	1.731789e-48	7.983766e-46
MsG0580024632.01	MsG0780039952.01	0.801432	9.028644e-49	4.311121e-46
MsG0580024632.01	MsG0780040044.01	0.807433	5.066066e-50	2.821358e-47
MsG0580024632.01	MsG0780040488.01	0.811618	6.398892e-51	3.979566e-48
MsG0580024632.01	MsG0780040788.01	0.812644	3.822632e-51	2.443732e-48
MsG0580024632.01	MsG0780041033.01	0.842435	2.591268e-58	3.929098e-55
MsG0580024632.01	MsG0780041456.01	0.808315	3.290543e-50	1.875433e-47
MsG0580024632.01	MsG0780041671.01	0.804342	2.262071e-49	1.163449e-46
MsG0580024632.01	MsG0880042053.01	0.805235	1.472429e-49	7.749313e-47
MsG0580024632.01	MsG0880042161.01	0.827281	1.706285e-54	1.639806e-51
MsG0580024632.01	MsG0880042314.01	0.804652	1.949211e-49	1.010589e-46
MsG0580024632.01	MsG0880042404.01	0.815532	8.809679e-52	6.089595e-49
MsG0580024632.01	MsG0880042698.01	0.807120	5.904067e-50	3.261242e-47
MsG0580024632.01	MsG0880043292.01	0.810980	8.798302e-51	5.381530e-48
MsG0580024632.01	MsG0880043479.01	0.802973	4.350792e-49	2.160354e-46
MsG0580024632.01	MsG0880043480.01	0.824180	9.281604e-54	8.160990e-51
MsG0580024632.01	MsG0880044079.01	0.805575	1.249240e-49	6.632432e-47
MsG0580024632.01	MsG0880044415.01	0.802336	5.889014e-49	2.877299e-46
MsG0580024632.01	MsG0880044542.01	0.814693	1.353189e-51	9.142337e-49
MsG0580024632.01	MsG0880044554.01	0.811913	5.518596e-51	3.459121e-48
MsG0580024632.01	MsG0880044573.01	0.823920	1.068099e-53	9.323063e-51
MsG0580024632.01	MsG0880044574.01	0.838196	3.319907e-57	4.413701e-54
MsG0580024632.01	MsG0880045450.01	0.801428	9.045960e-49	4.318910e-46
MsG0580024632.01	MsG0880045583.01	0.838184	3.344506e-57	4.444572e-54
MsG0580024632.01	MsG0880045639.01	0.810686	1.018973e-50	6.183066e-48
MsG0580024632.01	MsG0880045687.01	0.824534	7.663454e-54	6.806859e-51
MsG0580024632.01	MsG0880045936.01	0.806545	7.809036e-50	4.250224e-47
MsG0580024632.01	MsG0880046366.01	0.801590	8.378994e-49	4.016810e-46
MsG0580024632.01	MsG0880046479.01	0.802021	6.836521e-49	3.313411e-46
MsG0580024632.01	MsG0880046531.01	0.802821	4.677906e-49	2.314042e-46
MsG0580024632.01	MsG0880046973.01	0.829999	3.759295e-55	3.910799e-52
MsG0580024632.01	MsG0880047019.01	0.803911	2.780885e-49	1.414641e-46
MsG0580024632.01	MsG0880047497.01	0.813745	2.191170e-51	1.442831e-48
MsG0380015332.01	MsG0580024632.01	0.806426	8.274866e-50	4.489979e-47
MsG0380015436.01	MsG0580024632.01	0.801156	1.028321e-48	4.876260e-46
MsG0380015589.01	MsG0580024632.01	0.803367	3.606026e-49	1.808733e-46
MsG0380015779.01	MsG0580024632.01	0.816701	4.829405e-52	3.446629e-49
MsG0380015893.01	MsG0580024632.01	0.814220	1.721565e-51	1.148303e-48
MsG0380015980.01	MsG0580024632.01	0.815205	1.041610e-51	7.135125e-49
MsG0380016064.01	MsG0580024632.01	0.800063	1.718328e-48	7.925211e-46
MsG0380016102.01	MsG0580024632.01	0.800966	1.124609e-48	5.307354e-46
MsG0380016209.01	MsG0580024632.01	0.817221	3.689298e-52	2.670825e-49
MsG0380016227.01	MsG0580024632.01	0.803567	3.277564e-49	1.652634e-46
MsG0380016475.01	MsG0580024632.01	0.827894	1.215421e-54	1.189077e-51
MsG0380016483.01	MsG0580024632.01	0.820615	6.247915e-53	4.967656e-50
MsG0380016517.01	MsG0580024632.01	0.811726	6.060804e-51	3.780370e-48
MsG0380016581.01	MsG0580024632.01	0.814521	1.476666e-51	9.931199e-49
MsG0380016624.01	MsG0580024632.01	0.818635	1.769000e-52	1.331320e-49
MsG0380016765.01	MsG0580024632.01	0.806246	9.028040e-50	4.876458e-47
MsG0380016859.01	MsG0580024632.01	0.825520	4.482055e-54	4.094775e-51
MsG0380016910.01	MsG0580024632.01	0.805653	1.203261e-49	6.401269e-47
MsG0380017040.01	MsG0580024632.01	0.815916	7.235680e-52	5.054183e-49
MsG0380017232.01	MsG0580024632.01	0.822747	2.007953e-53	1.695609e-50
MsG0380017233.01	MsG0580024632.01	0.816089	6.618950e-52	4.645602e-49
MsG0380017266.01	MsG0580024632.01	-0.820231	7.649534e-53	6.018013e-50
MsG0380017461.01	MsG0580024632.01	0.801138	1.036963e-48	4.915106e-46
MsG0380017584.01	MsG0580024632.01	0.814534	1.467245e-51	9.870900e-49
MsG0380017604.01	MsG0580024632.01	0.804203	2.418181e-49	1.239267e-46
MsG0380017631.01	MsG0580024632.01	0.823120	1.643857e-53	1.402818e-50
MsG0380017680.01	MsG0580024632.01	0.831976	1.230134e-55	1.356433e-52
MsG0380017888.01	MsG0580024632.01	0.832709	8.095936e-56	9.122770e-53
MsG0380018009.01	MsG0580024632.01	0.812581	3.945004e-51	2.517792e-48
MsG0480018163.01	MsG0580024632.01	0.831399	1.706523e-55	1.849696e-52
MsG0480018251.01	MsG0580024632.01	0.829304	5.549147e-55	5.658224e-52
MsG0480018321.01	MsG0580024632.01	0.800717	1.264365e-48	5.928837e-46
MsG0480018347.01	MsG0580024632.01	0.805805	1.117844e-49	5.970124e-47
MsG0280006456.01	MsG0580024632.01	0.819833	9.435229e-53	7.341400e-50
MsG0280006595.01	MsG0580024632.01	0.802342	5.871131e-49	2.869054e-46
MsG0280007066.01	MsG0580024632.01	0.810891	9.199389e-51	5.613034e-48
MsG0280007072.01	MsG0580024632.01	0.816497	5.363511e-52	3.806485e-49
MsG0280007547.01	MsG0580024632.01	0.837720	4.400753e-57	5.766890e-54
MsG0280007564.01	MsG0580024632.01	0.805242	1.467428e-49	7.724282e-47
MsG0280007609.01	MsG0580024632.01	0.806549	7.794449e-50	4.242682e-47
MsG0280007610.01	MsG0580024632.01	0.809355	1.970898e-50	1.154694e-47
MsG0280007636.01	MsG0580024632.01	0.800447	1.434806e-48	6.682364e-46
MsG0280007764.01	MsG0580024632.01	0.803821	2.902715e-49	1.473138e-46
MsG0280008100.01	MsG0580024632.01	0.835480	1.637087e-56	2.004475e-53
MsG0280008615.01	MsG0580024632.01	0.820019	8.553914e-53	6.690689e-50
MsG0280008907.01	MsG0580024632.01	0.803624	3.189413e-49	1.610447e-46
MsG0280008970.01	MsG0580024632.01	0.802817	4.685045e-49	2.317403e-46
MsG0280009024.01	MsG0580024632.01	0.802945	4.409075e-49	2.187795e-46
MsG0280009739.01	MsG0580024632.01	0.804180	2.445089e-49	1.252346e-46
MsG0280009748.01	MsG0580024632.01	0.855494	6.074934e-62	1.405170e-58
MsG0280010109.01	MsG0580024632.01	0.808611	2.844696e-50	1.633800e-47
MsG0280010287.01	MsG0580024632.01	0.815825	7.579734e-52	5.281452e-49
MsG0280010389.01	MsG0580024632.01	0.806981	6.316147e-50	3.476485e-47
MsG0280010443.01	MsG0580024632.01	0.830895	2.270183e-55	2.424283e-52

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580024632.01.T01	MTR_5g017820	90.984	122	10	1	1	122	1	121	1.47e-42	145

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580024632.01.T01	AT5G66840	61.702	47	18	0	76	122	79	125	1.23e-13	66.2
MsG0580024632.01.T01	AT5G66840	61.702	47	18	0	76	122	79	125	1.23e-13	66.2

Find 16 sgRNAs with CRISPR-Local

Find 22 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAATTTCACTAGTATCTGAT+TGG	0.348352	5:+7419033	None:intergenic
AAACATGGATTGAGGCTTGC+AGG	0.354847	5:-7418766	MsG0580024632.01.T01:CDS
AAAGTTGTTTCTCTCCTTCA+AGG	0.364185	5:-7418927	MsG0580024632.01.T01:intron
AGAAGATCGCGATGAAGCTT+CGG	0.439866	5:-7418991	MsG0580024632.01.T01:CDS
ATCTTCTTCTTCAGAGGAAG+AGG	0.453477	5:+7419112	None:intergenic
AATTTCACTAGTATCTGATT+GGG	0.467790	5:+7419034	None:intergenic
ACGAATGCAAAGCATATTTG+CGG	0.480322	5:-7418789	MsG0580024632.01.T01:CDS
GCAATCGCTGAGTTGTTCTT+CGG	0.504039	5:+7419067	None:intergenic
CTAGGATAAAAGAGCATTGG+AGG	0.517575	5:-7418723	MsG0580024632.01.T01:CDS
ATTTGCGGAAACATGGATTG+AGG	0.528841	5:-7418774	MsG0580024632.01.T01:CDS
TCCTCTGAAGAAGAAGATGA+TGG	0.533862	5:-7419107	MsG0580024632.01.T01:CDS
ACCATCATCTTCTTCTTCAG+AGG	0.537897	5:+7419106	None:intergenic
TTGCTAGGATAAAAGAGCAT+TGG	0.543652	5:-7418726	MsG0580024632.01.T01:CDS
ATAGAGCAGTTTGTATTGCT+AGG	0.554640	5:-7418741	MsG0580024632.01.T01:CDS
TACTAGTGAAATTGAAGATG+AGG	0.566868	5:-7419024	MsG0580024632.01.T01:CDS
AAAGCATATTTGCGGAAACA+TGG	0.596916	5:-7418781	MsG0580024632.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTGTTAATTTTCAATTCATT+TGG	+	Chr5:7418983-7419002	None:intergenic	15.0%
!	AATTTCACTAGTATCTGATT+GGG	+	Chr5:7418841-7418860	None:intergenic	25.0%
	CAATTTCACTAGTATCTGAT+TGG	+	Chr5:7418842-7418861	None:intergenic	30.0%
	GGTAGAAATAAAAACCTTGA+AGG	+	Chr5:7418962-7418981	None:intergenic	30.0%
	TACTAGTGAAATTGAAGATG+AGG	-	Chr5:7418848-7418867	MsG0580024632.01.T01:intron	30.0%
!	AAGGAGAGAAACAACTTTTT+CGG	+	Chr5:7418943-7418962	None:intergenic	30.0%
!!	AATTTCGTGTTTGATTTTCC+AGG	-	Chr5:7419031-7419050	MsG0580024632.01.T01:CDS	30.0%
	AAAGCATATTTGCGGAAACA+TGG	-	Chr5:7419091-7419110	MsG0580024632.01.T01:CDS	35.0%
	ACGAATGCAAAGCATATTTG+CGG	-	Chr5:7419083-7419102	MsG0580024632.01.T01:CDS	35.0%
	ATAGAGCAGTTTGTATTGCT+AGG	-	Chr5:7419131-7419150	MsG0580024632.01.T01:CDS	35.0%
!	TTGCTAGGATAAAAGAGCAT+TGG	-	Chr5:7419146-7419165	MsG0580024632.01.T01:CDS	35.0%
!!	AAAGTTGTTTCTCTCCTTCA+AGG	-	Chr5:7418945-7418964	MsG0580024632.01.T01:CDS	35.0%
	ACCATCATCTTCTTCTTCAG+AGG	+	Chr5:7418769-7418788	None:intergenic	40.0%
	ATCTTCTTCTTCAGAGGAAG+AGG	+	Chr5:7418763-7418782	None:intergenic	40.0%
	GAATCTATATCCTTTCGACC+TGG	+	Chr5:7419052-7419071	None:intergenic	40.0%
!	ATTTGCGGAAACATGGATTG+AGG	-	Chr5:7419098-7419117	MsG0580024632.01.T01:CDS	40.0%
!	TCCTCTGAAGAAGAAGATGA+TGG	-	Chr5:7418765-7418784	MsG0580024632.01.T01:CDS	40.0%
!!	CTAGGATAAAAGAGCATTGG+AGG	-	Chr5:7419149-7419168	MsG0580024632.01.T01:CDS	40.0%
!!	GTTTGATTTTCCAGGTCGAA+AGG	-	Chr5:7419039-7419058	MsG0580024632.01.T01:CDS	40.0%
	AGAAGATCGCGATGAAGCTT+CGG	-	Chr5:7418881-7418900	MsG0580024632.01.T01:intron	45.0%
	GCAATCGCTGAGTTGTTCTT+CGG	+	Chr5:7418808-7418827	None:intergenic	45.0%
!	AAACATGGATTGAGGCTTGC+AGG	-	Chr5:7419106-7419125	MsG0580024632.01.T01:CDS	45.0%

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	7418720	7419174	7418720	ID=MsG0580024632.01;Name=MsG0580024632.01
Chr5	mRNA	7418720	7419174	7418720	ID=MsG0580024632.01.T01;Parent=MsG0580024632.01;Name=MsG0580024632.01.T01;_AED=0.50;_eAED=0.50;_QI=0\|0\|0\|1\|1\|1\|2\|0\|122
Chr5	exon	7418928	7419174	7418928	ID=MsG0580024632.01.T01:exon:1208;Parent=MsG0580024632.01.T01
Chr5	exon	7418720	7418841	7418720	ID=MsG0580024632.01.T01:exon:1207;Parent=MsG0580024632.01.T01
Chr5	CDS	7418928	7419174	7418928	ID=MsG0580024632.01.T01:cds;Parent=MsG0580024632.01.T01
Chr5	CDS	7418720	7418841	7418720	ID=MsG0580024632.01.T01:cds;Parent=MsG0580024632.01.T01

Gene Sequence	>MsG0580024632.01.T01 ATGGATGAGAGGAGAGGTAAAAGAGCAGTGATTGTTCTCTCCTCTTCCTCTGAAGAAGAAGATGATGGTGATTACGACGACGATTCCGAAGAACAACTCAGCGATTGCGATGACTCGTCCCAATCAGATACTAGTGAAATTGAAGATGAGGATGATGATGAAGAAGATCGCGATGAAGCTTCGGAATCAGATAATTGTGATGTTGATGACGAATCTCTCTCCGAAAAAGTTGTTTCTCTCCTTCAAGGTCGAAAGGATATAGATTCGTTGAAATTAAACGAATGCAAAGCATATTTGCGGAAACATGGATTGAGGCTTGCAGGAAATAGAGCAGTTTGTATTGCTAGGATAAAAGAGCATTGGAGGTAA
Protein sequence	>MsG0580024632.01.T01 MDERRGKRAVIVLSSSSEEEDDGDYDDDSEEQLSDCDDSSQSDTSEIEDEDDDEEDRDEASESDNCDVDDESLSEKVVSLLQGRKDIDSLKLNECKAYLRKHGLRLAGNRAVCIARIKEHWR*