AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880044477.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044477.01.T02 MTR_7g110660 74.041 443 48 5 2 388 82 513 0.0 611
MsG0880044477.01.T02 MTR_7g110660 73.684 437 48 5 8 388 1 426 0.0 595
MsG0880044477.01.T02 MTR_3g114570 52.826 407 128 5 47 401 3 397 2.78e-134 395
MsG0880044477.01.T02 MTR_3g048190 51.214 412 137 4 42 401 4 403 1.45e-124 370
MsG0880044477.01.T02 MTR_3g048190 51.214 412 137 4 42 401 11 410 1.84e-124 370
MsG0880044477.01.T02 MTR_3g114550 50.661 227 103 5 106 326 1 224 4.25e-64 206
MsG0880044477.01.T02 MTR_3g100910 29.227 414 225 6 55 412 68 469 1.42e-60 206
MsG0880044477.01.T01 MTR_7g110660 74.041 443 48 5 2 388 82 513 0.0 611
MsG0880044477.01.T01 MTR_7g110660 73.684 437 48 5 8 388 1 426 0.0 595
MsG0880044477.01.T01 MTR_3g114570 52.826 407 128 5 47 401 3 397 2.78e-134 395
MsG0880044477.01.T01 MTR_3g048190 51.214 412 137 4 42 401 4 403 1.45e-124 370
MsG0880044477.01.T01 MTR_3g048190 51.214 412 137 4 42 401 11 410 1.84e-124 370
MsG0880044477.01.T01 MTR_3g114550 50.661 227 103 5 106 326 1 224 4.25e-64 206
MsG0880044477.01.T01 MTR_3g100910 29.227 414 225 6 55 412 68 469 1.42e-60 206
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044477.01.T02 AT3G62120 60.422 427 88 7 35 401 21 426 1.92e-160 463
MsG0880044477.01.T02 AT3G62120 60.422 427 88 7 35 401 34 439 2.17e-160 463
MsG0880044477.01.T02 AT3G62120 60.422 427 88 7 35 401 34 439 2.17e-160 463
MsG0880044477.01.T02 AT5G52520 28.929 439 244 6 30 412 44 470 3.57e-61 208
MsG0880044477.01.T02 AT5G10880 60.909 110 41 2 278 385 89 198 1.72e-32 125
MsG0880044477.01.T01 AT3G62120 60.422 427 88 7 35 401 21 426 1.92e-160 463
MsG0880044477.01.T01 AT3G62120 60.422 427 88 7 35 401 34 439 2.17e-160 463
MsG0880044477.01.T01 AT3G62120 60.422 427 88 7 35 401 34 439 2.17e-160 463
MsG0880044477.01.T01 AT5G52520 28.929 439 244 6 30 412 44 470 3.57e-61 208
MsG0880044477.01.T01 AT5G10880 60.909 110 41 2 278 385 89 198 1.72e-32 125

Find 20 sgRNAs with CRISPR-Local

Find 337 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACCTGATTGTTGTGGTTT+TGG 0.279807 8:+42716852 None:intergenic
TCGTCATCCTTCACAATGGC+GGG 0.453103 8:-42716933 MsG0880044477.01.T01:CDS
ACTCACTCTGTGTGTAGTGT+TGG 0.469024 8:+42717110 None:intergenic
CAACCAAAACCACAACAATC+AGG 0.476529 8:-42716855 MsG0880044477.01.T01:intron
TGGAAAGAAGCGAGAGAGAA+TGG 0.504475 8:+42717055 None:intergenic
ACAGAGTGAGTCTCCTCTTA+CGG 0.512884 8:-42717098 MsG0880044477.01.T01:five_prime_UTR
CGCTTCTTTCCAACACAACA+AGG 0.513832 8:-42717044 MsG0880044477.01.T01:intron
CTCGTCATCCTTCACAATGG+CGG 0.514201 8:-42716934 MsG0880044477.01.T01:CDS
CTCACTCTGTGTGTAGTGTT+GGG 0.516394 8:+42717111 None:intergenic
ATCGGTCCCCGCCATTGTGA+AGG 0.522242 8:+42716926 None:intergenic
TCTCTTCTTCAATTCCTCAT+CGG 0.523543 8:-42716986 MsG0880044477.01.T01:intron
AAGAGCGATGGTGCCGTAAG+AGG 0.527177 8:+42717085 None:intergenic
TTTATGAATGAATTGAGAAA+CGG 0.551788 8:+42717016 None:intergenic
GTGAAATAACCTGATTGTTG+TGG 0.560703 8:+42716846 None:intergenic
ACGGTGTTACCTTGTTGTGT+TGG 0.565907 8:+42717035 None:intergenic
GGTAACATTCTGTTTCTCAT+CGG 0.590294 8:-42716965 MsG0880044477.01.T01:intron
CGTCATCCTTCACAATGGCG+GGG 0.607064 8:-42716932 MsG0880044477.01.T01:CDS
AATGGAACGTGCAAGAGCGA+TGG 0.607251 8:+42717073 None:intergenic
GAAACAGAATGTTACCGATG+AGG 0.666080 8:+42716972 None:intergenic
GTGCTCGTCATCCTTCACAA+TGG 0.693246 8:-42716937 MsG0880044477.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATAAAATATAAAATATT+TGG + Chr8:42713862-42713881 None:intergenic 0.0%
!! AAAAAAAAAAAAACAAAACT+TGG + Chr8:42715475-42715494 None:intergenic 10.0%
!! AAAATTAAATGAGATTTATT+CGG + Chr8:42715176-42715195 None:intergenic 10.0%
!! AATGATAAATAAATACATTT+GGG + Chr8:42712310-42712329 None:intergenic 10.0%
!! TAATGATAAATAAATACATT+TGG + Chr8:42712311-42712330 None:intergenic 10.0%
!! TTAAATAAGATATATAATTG+AGG - Chr8:42715551-42715570 MsG0880044477.01.T01:intron 10.0%
!!! TTGAAAATTTTCTTATATAT+AGG - Chr8:42716672-42716691 MsG0880044477.01.T01:intron 10.0%
!! AATATTCACAAAAATAACTA+TGG + Chr8:42712774-42712793 None:intergenic 15.0%
!! CTAATTATAATAATATACAC+TGG + Chr8:42715926-42715945 None:intergenic 15.0%
!!! AGTTTTACTTTGATTTTATA+CGG - Chr8:42717058-42717077 MsG0880044477.01.T01:five_prime_UTR 15.0%
!!! CCATAAAACAAATATTTTTA+AGG + Chr8:42713056-42713075 None:intergenic 15.0%
!!! CCTTAAAAATATTTGTTTTA+TGG - Chr8:42713053-42713072 MsG0880044477.01.T01:intron 15.0%
!!! TATATATTTAATTTACGGTT+TGG - Chr8:42715993-42716012 MsG0880044477.01.T01:intron 15.0%
!!! TTGGCTATATATTTAATTTA+CGG - Chr8:42715988-42716007 MsG0880044477.01.T01:intron 15.0%
!! ATATCAAAATATTACGCATA+CGG + Chr8:42715959-42715978 None:intergenic 20.0%
!! TTAGAAAAATGTACTTTCAA+AGG + Chr8:42714312-42714331 None:intergenic 20.0%
!! TTCATGAAATAACTATTTGA+TGG + Chr8:42714052-42714071 None:intergenic 20.0%
!! TTCTAAACTATAATTGTTTC+AGG - Chr8:42714335-42714354 MsG0880044477.01.T01:CDS 20.0%
!! TTTATGAATGAATTGAGAAA+CGG + Chr8:42711690-42711709 None:intergenic 20.0%
!!! ATAATTTTAATATCAGTGCT+AGG - Chr8:42713521-42713540 MsG0880044477.01.T01:intron 20.0%
!!! ATCTTCATTTTCTTTATTTC+TGG + Chr8:42712861-42712880 None:intergenic 20.0%
!!! TATTTTAAAAACAAATGTGC+AGG - Chr8:42712824-42712843 MsG0880044477.01.T01:intron 20.0%
!!! TGGTTTCTTTTCTTATATAA+AGG + Chr8:42716448-42716467 None:intergenic 20.0%
!!! TGTGACTTTTTCTTATAAAT+GGG - Chr8:42716636-42716655 MsG0880044477.01.T01:intron 20.0%
!!! TTGAGATTTTGGAATTATAT+CGG - Chr8:42714361-42714380 MsG0880044477.01.T01:intron 20.0%
!!! TTGATTTGGATTAATTTTAC+AGG - Chr8:42712152-42712171 MsG0880044477.01.T01:intron 20.0%
!!! TTGTGACTTTTTCTTATAAA+TGG - Chr8:42716635-42716654 MsG0880044477.01.T01:intron 20.0%
!!! TTTTACTATGTTATCTCAAT+TGG - Chr8:42712543-42712562 MsG0880044477.01.T01:intron 20.0%
!!! TTTTTTAGTCATTCATGTTT+TGG - Chr8:42715489-42715508 MsG0880044477.01.T01:intron 20.0%
! AAAAAATAATGCCTGATGAA+TGG + Chr8:42713412-42713431 None:intergenic 25.0%
! AAGCATACTATCTTAAAATC+TGG + Chr8:42715451-42715470 None:intergenic 25.0%
! AATAATATACACTGGACAAT+CGG + Chr8:42715918-42715937 None:intergenic 25.0%
! AATTCAATTGAATTGTACCT+CGG + Chr8:42712034-42712053 None:intergenic 25.0%
! AGATAAACTATGAAATGAGA+AGG - Chr8:42714652-42714671 MsG0880044477.01.T01:CDS 25.0%
! ATAAGAATTGAGAGTTGAAA+AGG + Chr8:42713564-42713583 None:intergenic 25.0%
! ATTGAGTACTATGATATTTC+TGG - Chr8:42712195-42712214 MsG0880044477.01.T01:intron 25.0%
! CAAGTTCATAATAAAACTGA+AGG - Chr8:42715838-42715857 MsG0880044477.01.T01:CDS 25.0%
! CTATCTTAAAATCTGGATTA+TGG + Chr8:42715444-42715463 None:intergenic 25.0%
! TAAGAATTGAGAGTTGAAAA+GGG + Chr8:42713563-42713582 None:intergenic 25.0%
! TGGAAAAATATGTTAAAGCA+AGG - Chr8:42716060-42716079 MsG0880044477.01.T01:intron 25.0%
! TTAAATGTATTCAACGAGTT+TGG - Chr8:42712974-42712993 MsG0880044477.01.T01:intron 25.0%
! TTAGTTGTTGATCTATACTA+AGG - Chr8:42712328-42712347 MsG0880044477.01.T01:intron 25.0%
! TTATTGGGTGAAATTCATTT+GGG + Chr8:42713650-42713669 None:intergenic 25.0%
! TTCAACTCTCAATTCTTATT+GGG - Chr8:42713565-42713584 MsG0880044477.01.T01:intron 25.0%
! TTTCAACTCTCAATTCTTAT+TGG - Chr8:42713564-42713583 MsG0880044477.01.T01:intron 25.0%
!! ACTGCATTAATTTTCATCTT+TGG - Chr8:42714103-42714122 MsG0880044477.01.T01:intron 25.0%
!! TCTTTTCTTATATAAAGGAC+CGG + Chr8:42716443-42716462 None:intergenic 25.0%
!! TTTTCTTGGTAAACTGTTAT+TGG - Chr8:42716018-42716037 MsG0880044477.01.T01:intron 25.0%
!! TTTTGATGTAAATTCTTCCT+AGG - Chr8:42714551-42714570 MsG0880044477.01.T01:intron 25.0%
!!! AATCTCATTTAATTTTGCAC+AGG - Chr8:42715180-42715199 MsG0880044477.01.T01:intron 25.0%
!!! CTTATACCAATTTTAATTGC+AGG - Chr8:42713956-42713975 MsG0880044477.01.T01:intron 25.0%
!!! GCGTTGTTTTTTTATTTAAC+TGG + Chr8:42715730-42715749 None:intergenic 25.0%
!!! TGGTTGTGTTTTTAGAATAA+AGG - Chr8:42712994-42713013 MsG0880044477.01.T01:intron 25.0%
!!! TTATTGGTTTATAATGCTTC+AGG - Chr8:42716034-42716053 MsG0880044477.01.T01:intron 25.0%
!!! TTTTCACCTGATTTGTTTTT+AGG - Chr8:42712064-42712083 MsG0880044477.01.T01:intron 25.0%
!!! TTTTCATTTTTGACTAGTGT+AGG - Chr8:42712111-42712130 MsG0880044477.01.T01:intron 25.0%
AAAAAAACAACGCATGTGAT+TGG - Chr8:42715737-42715756 MsG0880044477.01.T01:intron 30.0%
AAAGGACCAACATTAAATGA+GGG - Chr8:42716574-42716593 MsG0880044477.01.T01:intron 30.0%
AAGTTACTAGATCTTGATTG+TGG - Chr8:42716930-42716949 MsG0880044477.01.T01:CDS 30.0%
AATAAGAAGGCTGAAAACTT+CGG - Chr8:42711997-42712016 MsG0880044477.01.T01:intron 30.0%
AATTAACCATAGTATAGAGC+AGG + Chr8:42716765-42716784 None:intergenic 30.0%
ACAATGCTGAATGTTAAAAG+AGG + Chr8:42713721-42713740 None:intergenic 30.0%
ACACTCAAGTTATTAAGAGA+CGG + Chr8:42716201-42716220 None:intergenic 30.0%
ACAGTATTAGAAACAAACAG+AGG + Chr8:42712900-42712919 None:intergenic 30.0%
ACTTGTGTATAATCCATTTC+AGG - Chr8:42713930-42713949 MsG0880044477.01.T01:intron 30.0%
ATATACCCACTATTGTTGAA+AGG - Chr8:42716556-42716575 MsG0880044477.01.T01:intron 30.0%
ATATGTTAAAGCAAGGACAA+AGG - Chr8:42716067-42716086 MsG0880044477.01.T01:intron 30.0%
ATTAGGTTTGACCAATAAGA+AGG - Chr8:42711984-42712003 MsG0880044477.01.T01:intron 30.0%
CAGTATTAGAAACAAACAGA+GGG + Chr8:42712899-42712918 None:intergenic 30.0%
CATTCAGATCATACATACAT+GGG - Chr8:42715334-42715353 MsG0880044477.01.T01:intron 30.0%
CATTCCACGTTTCAATTTAA+CGG - Chr8:42711907-42711926 MsG0880044477.01.T01:intron 30.0%
CTCTGTTATAGCAAATTTGT+TGG - Chr8:42713454-42713473 MsG0880044477.01.T01:intron 30.0%
CTTATTGGGTGAAATTCATT+TGG + Chr8:42713651-42713670 None:intergenic 30.0%
CTTGTGTATAATCCATTTCA+GGG - Chr8:42713931-42713950 MsG0880044477.01.T01:intron 30.0%
GAAATAGACACTACATAAAG+TGG + Chr8:42713612-42713631 None:intergenic 30.0%
GAGAAAAAATGTGCTATAAC+TGG + Chr8:42712421-42712440 None:intergenic 30.0%
GAGTATATTCATACAAGTGA+CGG - Chr8:42716703-42716722 MsG0880044477.01.T01:CDS 30.0%
GTCAAGAAAGAAACTAGATT+AGG - Chr8:42711967-42711986 MsG0880044477.01.T01:intron 30.0%
GTTTGACCTAAAAACAAATC+AGG + Chr8:42712073-42712092 None:intergenic 30.0%
TAAATAGTCACAGCAAAATC+AGG + Chr8:42713158-42713177 None:intergenic 30.0%
TAAATCAGATTCTCCAGATT+TGG + Chr8:42713248-42713267 None:intergenic 30.0%
TACATAACAGTTTCACTAGT+TGG + Chr8:42713292-42713311 None:intergenic 30.0%
TAGTGTCTATTTCGTGATTA+TGG - Chr8:42713619-42713638 MsG0880044477.01.T01:intron 30.0%
TCATGCACATTTACTTCATA+TGG - Chr8:42713906-42713925 MsG0880044477.01.T01:intron 30.0%
TGATACAGAAAACTTGACAA+TGG + Chr8:42714508-42714527 None:intergenic 30.0%
TGGACTAATCGGATTTATAT+TGG - Chr8:42715757-42715776 MsG0880044477.01.T01:intron 30.0%
TGTTGATCTATACTAAGGTT+CGG - Chr8:42712333-42712352 MsG0880044477.01.T01:intron 30.0%
TTACTACTCTAAGTGGATAA+GGG - Chr8:42713315-42713334 MsG0880044477.01.T01:intron 30.0%
TTCTTATATATAGGACCAGA+GGG - Chr8:42716681-42716700 MsG0880044477.01.T01:intron 30.0%
TTTCTGCAAATTAGTGCAAT+AGG + Chr8:42715108-42715127 None:intergenic 30.0%
TTTCTTATATATAGGACCAG+AGG - Chr8:42716680-42716699 MsG0880044477.01.T01:intron 30.0%
! ATTTTACAGGTTGTTGTGAA+TGG - Chr8:42712165-42712184 MsG0880044477.01.T01:intron 30.0%
! TGCTTATTTGCTAAATCCTT+GGG + Chr8:42715070-42715089 None:intergenic 30.0%
! TTAGGTCAAACTTGTTTATC+TGG - Chr8:42712082-42712101 MsG0880044477.01.T01:intron 30.0%
! TTTTACAGGTTGTTGTGAAT+GGG - Chr8:42712166-42712185 MsG0880044477.01.T01:intron 30.0%
!! ACAAATTTGCTATAACAGAG+AGG + Chr8:42713454-42713473 None:intergenic 30.0%
!! ATTTTGATATGTCTGCTCAT+TGG - Chr8:42715969-42715988 MsG0880044477.01.T01:intron 30.0%
!! CAAAACAATTTTCGAGCTTA+CGG - Chr8:42712361-42712380 MsG0880044477.01.T01:intron 30.0%
!! CGACATTGATAATGATGATT+TGG - Chr8:42715237-42715256 MsG0880044477.01.T01:intron 30.0%
!! GTGTATCTATGAAGAGTATT+TGG - Chr8:42714383-42714402 MsG0880044477.01.T01:intron 30.0%
!! GTTTGTTTCTAATACTGTTC+TGG - Chr8:42712902-42712921 MsG0880044477.01.T01:intron 30.0%
!! TGATAATGATGATTTGGTTG+AGG - Chr8:42715243-42715262 MsG0880044477.01.T01:intron 30.0%
!! TTCTAATACTGTTCTGGAAA+AGG - Chr8:42712908-42712927 MsG0880044477.01.T01:intron 30.0%
!! TTGTTGTGTTTTGTTGTCAT+CGG + Chr8:42711798-42711817 None:intergenic 30.0%
!!! ACTGGTCTATTTTAGTCATA+AGG + Chr8:42712403-42712422 None:intergenic 30.0%
!!! CTGGTCTATTTTAGTCATAA+GGG + Chr8:42712402-42712421 None:intergenic 30.0%
!!! TGGTTGTTTTGGTTGTTTTT+GGG + Chr8:42711834-42711853 None:intergenic 30.0%
!!! TTGGTTGTTTTGGTTGTTTT+TGG + Chr8:42711835-42711854 None:intergenic 30.0%
!!! TTGTCTGGTTTTGATGATTT+TGG + Chr8:42716468-42716487 None:intergenic 30.0%
AAAAGATGATCTTAGCTCCT+TGG - Chr8:42715381-42715400 MsG0880044477.01.T01:CDS 35.0%
AAAGAACGTGTAGGAAGATT+GGG + Chr8:42711886-42711905 None:intergenic 35.0%
AATTCTCAGTGGGAAATGAA+AGG - Chr8:42715019-42715038 MsG0880044477.01.T01:intron 35.0%
ACGACTCCTGCAATTAAAAT+TGG + Chr8:42713965-42713984 None:intergenic 35.0%
AGAAAGGTTTACTTACCAAC+TGG + Chr8:42715655-42715674 None:intergenic 35.0%
ATACCAAACATGCGCTTAAT+AGG - Chr8:42716394-42716413 MsG0880044477.01.T01:intron 35.0%
ATTTAACCTCAATCAGAGTG+TGG + Chr8:42715537-42715556 None:intergenic 35.0%
ATTTATTCCAAACACTGGTC+TGG - Chr8:42714575-42714594 MsG0880044477.01.T01:intron 35.0%
CAAGGATTTAGCAAATAAGC+AGG - Chr8:42715069-42715088 MsG0880044477.01.T01:intron 35.0%
CATCACCAGATGATTCATAA+AGG + Chr8:42713782-42713801 None:intergenic 35.0%
CTAACTGATAGCAGATAAAC+CGG + Chr8:42712684-42712703 None:intergenic 35.0%
CTTACTACTCTAAGTGGATA+AGG - Chr8:42713314-42713333 MsG0880044477.01.T01:intron 35.0%
CTTATCCACTTAGAGTAGTA+AGG + Chr8:42713316-42713335 None:intergenic 35.0%
CTTGAACAATGCTTATACCT+CGG + Chr8:42716143-42716162 None:intergenic 35.0%
GAAAGGACCAACATTAAATG+AGG - Chr8:42716573-42716592 MsG0880044477.01.T01:intron 35.0%
GAAAGGTTTACTTACCAACT+GGG + Chr8:42715654-42715673 None:intergenic 35.0%
GAAGCTAGTTCACCATTTAA+TGG - Chr8:42716960-42716979 MsG0880044477.01.T01:intron 35.0%
GACAGCGTTTAGAAATAGAA+AGG + Chr8:42715671-42715690 None:intergenic 35.0%
GATAGAAAATCTGTGAGTGT+GGG + Chr8:42714290-42714309 None:intergenic 35.0%
GCATTCAGATCATACATACA+TGG - Chr8:42715333-42715352 MsG0880044477.01.T01:intron 35.0%
GTAATCCACAAATTCAGTGA+AGG + Chr8:42716988-42717007 None:intergenic 35.0%
GTGAAATAACCTGATTGTTG+TGG + Chr8:42711860-42711879 None:intergenic 35.0%
TAAAGAACGTGTAGGAAGAT+TGG + Chr8:42711887-42711906 None:intergenic 35.0%
TACAAAGATGCTGATACTCA+AGG - Chr8:42714902-42714921 MsG0880044477.01.T01:intron 35.0%
TACTACTCTAAGTGGATAAG+GGG - Chr8:42713316-42713335 MsG0880044477.01.T01:intron 35.0%
TAGGCATTTATTCCAAACAC+TGG - Chr8:42714570-42714589 MsG0880044477.01.T01:intron 35.0%
TATGAACCTGCTCTATACTA+TGG - Chr8:42716756-42716775 MsG0880044477.01.T01:CDS 35.0%
TCTCTTCTTCAATTCCTCAT+CGG - Chr8:42711717-42711736 MsG0880044477.01.T01:three_prime_UTR 35.0%
TCTTATTGGGTGAAATCATG+TGG - Chr8:42713578-42713597 MsG0880044477.01.T01:intron 35.0%
TGAGTATCAGCATCTTTGTA+AGG + Chr8:42714902-42714921 None:intergenic 35.0%
TGCAACAACTAATGATTGTC+TGG + Chr8:42716483-42716502 None:intergenic 35.0%
TGTATCCTTACTACTCTAAG+TGG - Chr8:42713308-42713327 MsG0880044477.01.T01:intron 35.0%
TTCTAGCCCTCATTTAATGT+TGG + Chr8:42716583-42716602 None:intergenic 35.0%
TTCTTATATAAAGGACCGGA+GGG + Chr8:42716439-42716458 None:intergenic 35.0%
TTGAACAATGCTTATACCTC+GGG + Chr8:42716142-42716161 None:intergenic 35.0%
TTGGTATAAGTACCCTGAAA+TGG + Chr8:42713946-42713965 None:intergenic 35.0%
TTGGTCCTTTCAACAATAGT+GGG + Chr8:42716564-42716583 None:intergenic 35.0%
TTGGTTTATAATGCTTCAGG+AGG - Chr8:42716037-42716056 MsG0880044477.01.T01:intron 35.0%
TTGTATGAATATACTCCCTC+TGG + Chr8:42716699-42716718 None:intergenic 35.0%
TTTACAGGTTGTTGTGAATG+GGG - Chr8:42712167-42712186 MsG0880044477.01.T01:intron 35.0%
TTTCTTATATAAAGGACCGG+AGG + Chr8:42716440-42716459 None:intergenic 35.0%
! ACTTGAACTGAAGCTACTTT+AGG + Chr8:42714863-42714882 None:intergenic 35.0%
! AGGTATAAGCATTGTTCAAG+TGG - Chr8:42716143-42716162 MsG0880044477.01.T01:intron 35.0%
! AGTGTTTGGAATAAATGCCT+AGG + Chr8:42714571-42714590 None:intergenic 35.0%
! ATCTATACTAAGGTTCGGTT+TGG - Chr8:42712338-42712357 MsG0880044477.01.T01:intron 35.0%
! CACCACCTACAAAAAAGTTT+TGG + Chr8:42711933-42711952 None:intergenic 35.0%
! CACCACTGATTAAGTTTCAA+AGG + Chr8:42713355-42713374 None:intergenic 35.0%
! CTGCTTATTTGCTAAATCCT+TGG + Chr8:42715071-42715090 None:intergenic 35.0%
! GAAGTTTTCAGCCTTCTTAT+TGG + Chr8:42711998-42712017 None:intergenic 35.0%
! GGTAACATTCTGTTTCTCAT+CGG - Chr8:42711738-42711757 MsG0880044477.01.T01:three_prime_UTR 35.0%
! GTTCCTCTAAGGATTGAAAT+CGG - Chr8:42715043-42715062 MsG0880044477.01.T01:intron 35.0%
! TAACCTGATTGTTGTGGTTT+TGG + Chr8:42711854-42711873 None:intergenic 35.0%
! TTCCTCTAAGGATTGAAATC+GGG - Chr8:42715044-42715063 MsG0880044477.01.T01:intron 35.0%
!! AAATGAAAGGTGTTCCTCTA+AGG - Chr8:42715032-42715051 MsG0880044477.01.T01:intron 35.0%
!! ATGCTGTGTTGACTTTGATT+TGG - Chr8:42712138-42712157 MsG0880044477.01.T01:intron 35.0%
!! TAAGAAGCGTTTGAGCTTAT+AGG - Chr8:42712492-42712511 MsG0880044477.01.T01:intron 35.0%
!! TATAGCAAATTTGTTGGCTG+TGG - Chr8:42713460-42713479 MsG0880044477.01.T01:intron 35.0%
!! TGCCTTTGAAACTTAATCAG+TGG - Chr8:42713350-42713369 MsG0880044477.01.T01:intron 35.0%
!!! AACGGCCAAAACTTTTTTGT+AGG - Chr8:42711925-42711944 MsG0880044477.01.T01:intron 35.0%
!!! CAAAACTTTTTTGTAGGTGG+TGG - Chr8:42711931-42711950 MsG0880044477.01.T01:intron 35.0%
!!! GGTTGTTTTGGTTGTTTTTG+GGG + Chr8:42711833-42711852 None:intergenic 35.0%
!!! GTTTCAGGTTCTTGAGATTT+TGG - Chr8:42714350-42714369 MsG0880044477.01.T01:intron 35.0%
!!! TGTTGTGGTTTTGGTTGTTT+TGG + Chr8:42711845-42711864 None:intergenic 35.0%
!!! TTGCGCTTTTTCAACAGATT+GGG - Chr8:42714792-42714811 MsG0880044477.01.T01:intron 35.0%
!!! TTTACGGTTTGGTGTTTTCT+TGG - Chr8:42716004-42716023 MsG0880044477.01.T01:intron 35.0%
!!! TTTGCGCTTTTTCAACAGAT+TGG - Chr8:42714791-42714810 MsG0880044477.01.T01:intron 35.0%
AAAGGAGAAGGACCATATCA+AGG - Chr8:42712926-42712945 MsG0880044477.01.T01:intron 40.0%
AACATGCGCTTAATAGGAGA+CGG - Chr8:42716400-42716419 MsG0880044477.01.T01:intron 40.0%
AAGGAGAAGGACCATATCAA+GGG - Chr8:42712927-42712946 MsG0880044477.01.T01:intron 40.0%
ACCTTGGTCAATGGCTATTT+GGG - Chr8:42712233-42712252 MsG0880044477.01.T01:intron 40.0%
ACGCATGTGATTGGACTAAT+CGG - Chr8:42715746-42715765 MsG0880044477.01.T01:intron 40.0%
ACTTTACACTACCAGTGTTG+AGG - Chr8:42714458-42714477 MsG0880044477.01.T01:intron 40.0%
AGAGACAACTATTCTCTGGA+TGG - Chr8:42714995-42715014 MsG0880044477.01.T01:intron 40.0%
AGGTGCAACTTCTCATTGTT+TGG - Chr8:42714605-42714624 MsG0880044477.01.T01:intron 40.0%
AGTGGTGCAATGTTGTTAGA+TGG - Chr8:42713368-42713387 MsG0880044477.01.T01:intron 40.0%
AGTTATTAAGAGACGGAGGT+AGG + Chr8:42716194-42716213 None:intergenic 40.0%
ATAATGCCTGATGAATGGTG+TGG + Chr8:42713407-42713426 None:intergenic 40.0%
ATCCAGAGAATAGTTGTCTC+TGG + Chr8:42714996-42715015 None:intergenic 40.0%
ATCCATGTCTGACTAAGCTT+AGG + Chr8:42712742-42712761 None:intergenic 40.0%
ATGAGAAGGAGAGAAAGCAA+TGG - Chr8:42714666-42714685 MsG0880044477.01.T01:CDS 40.0%
ATTTAAGTGACTCTCACCTC+TGG + Chr8:42712960-42712979 None:intergenic 40.0%
CAACCAAAACCACAACAATC+AGG - Chr8:42711848-42711867 MsG0880044477.01.T01:intron 40.0%
CAACCACATATTCACAGTTG+CGG + Chr8:42714945-42714964 None:intergenic 40.0%
CACTACAAAACCACAAGAGA+AGG + Chr8:42714194-42714213 None:intergenic 40.0%
CATTCAAAGTGCAAGATGGA+AGG + Chr8:42715815-42715834 None:intergenic 40.0%
CCTAAAAGGTCAACAACACA+AGG + Chr8:42716855-42716874 None:intergenic 40.0%
CGCTTCCTTTATGAATCATC+TGG - Chr8:42713774-42713793 MsG0880044477.01.T01:CDS 40.0%
CTAGTTGGACGAATAGCAAT+AGG + Chr8:42713277-42713296 None:intergenic 40.0%
CTATAACAGAGAGGAAAGCA+TGG + Chr8:42713445-42713464 None:intergenic 40.0%
CTCAAGTTATTAAGAGACGG+AGG + Chr8:42716198-42716217 None:intergenic 40.0%
GAAACAGAATGTTACCGATG+AGG + Chr8:42711734-42711753 None:intergenic 40.0%
GATAAACCGGCTGATATTAG+CGG + Chr8:42712671-42712690 None:intergenic 40.0%
GCTTACAGTTCGAGTACTAT+AGG + Chr8:42714710-42714729 None:intergenic 40.0%
GGATAGAAAATCTGTGAGTG+TGG + Chr8:42714291-42714310 None:intergenic 40.0%
GGTGCAACTTCTCATTGTTT+GGG - Chr8:42714606-42714625 MsG0880044477.01.T01:intron 40.0%
GTGGAATGTAAAGAACGTGT+AGG + Chr8:42711895-42711914 None:intergenic 40.0%
GTGGTGCAATGTTGTTAGAT+GGG - Chr8:42713369-42713388 MsG0880044477.01.T01:intron 40.0%
GTTGGTCCTTTCAACAATAG+TGG + Chr8:42716565-42716584 None:intergenic 40.0%
GTTTATAATGCTTCAGGAGG+TGG - Chr8:42716040-42716059 MsG0880044477.01.T01:intron 40.0%
TAATGCCTGATGAATGGTGT+GGG + Chr8:42713406-42713425 None:intergenic 40.0%
TCAACACTCGCACTCTTATT+GGG + Chr8:42713665-42713684 None:intergenic 40.0%
TCTCCTATTAAGCGCATGTT+TGG + Chr8:42716400-42716419 None:intergenic 40.0%
TCTGGATGGAAATTCTCAGT+GGG - Chr8:42715009-42715028 MsG0880044477.01.T01:intron 40.0%
TGAACAATGCTTATACCTCG+GGG + Chr8:42716141-42716160 None:intergenic 40.0%
TTCAACACTCGCACTCTTAT+TGG + Chr8:42713666-42713685 None:intergenic 40.0%
TTGGCCGTTAAATTGAAACG+TGG + Chr8:42711914-42711933 None:intergenic 40.0%
TTTCTTGCAAAGCAGCTTCA+CGG + Chr8:42713823-42713842 None:intergenic 40.0%
! AAATGTTTTGCCCTTTACCC+AGG - Chr8:42713210-42713229 MsG0880044477.01.T01:intron 40.0%
! ACATGCTTTTGCAACAAAGG+AGG - Chr8:42714007-42714026 MsG0880044477.01.T01:intron 40.0%
! ATGGTTCATGGTGATGACAA+GGG - Chr8:42714824-42714843 MsG0880044477.01.T01:intron 40.0%
! GACACATGCTTTTGCAACAA+AGG - Chr8:42714004-42714023 MsG0880044477.01.T01:intron 40.0%
! GTGTCATTCAAAGTGCAAGA+TGG + Chr8:42715819-42715838 None:intergenic 40.0%
! TGAACTGAAGCTACTTTAGG+TGG + Chr8:42714860-42714879 None:intergenic 40.0%
! TGGTGATGATTCCAGTGAAT+GGG - Chr8:42713794-42713813 MsG0880044477.01.T01:CDS 40.0%
! TTTTCAACAGATTGGGGTGA+TGG - Chr8:42714799-42714818 MsG0880044477.01.T01:intron 40.0%
!! CCTTGTGTTGTTGACCTTTT+AGG - Chr8:42716852-42716871 MsG0880044477.01.T01:intron 40.0%
!! TACTGTTCTGGAAAAGGAGA+AGG - Chr8:42712914-42712933 MsG0880044477.01.T01:intron 40.0%
!! TCAGTGAAGGCACCATTAAA+TGG + Chr8:42716975-42716994 None:intergenic 40.0%
!! TGTCTGTTGGTTTCTGTATC+AGG - Chr8:42715691-42715710 MsG0880044477.01.T01:intron 40.0%
!!! GGCCAAAACTTTTTTGTAGG+TGG - Chr8:42711928-42711947 MsG0880044477.01.T01:intron 40.0%
!!! TGCGCTTTTTCAACAGATTG+GGG - Chr8:42714793-42714812 MsG0880044477.01.T01:intron 40.0%
!!! TTGTTTTTGGGGTTTTGCAG+CGG + Chr8:42711822-42711841 None:intergenic 40.0%
AAAGGAGGAAGCAGATACAG+AGG - Chr8:42714022-42714041 MsG0880044477.01.T01:intron 45.0%
AACCAATCAGCATGACATGC+AGG + Chr8:42713029-42713048 None:intergenic 45.0%
AAGGAGAGAAAGCAATGGTC+TGG - Chr8:42714671-42714690 MsG0880044477.01.T01:CDS 45.0%
AATGAGACACTGTGCATGCT+TGG - Chr8:42716332-42716351 MsG0880044477.01.T01:intron 45.0%
AATGGTCTGGCAGAACTCAT+GGG - Chr8:42714684-42714703 MsG0880044477.01.T01:CDS 45.0%
ACAGAGTGAGTCTCCTCTTA+CGG - Chr8:42711605-42711624 MsG0880044477.01.T01:three_prime_UTR 45.0%
ACCAATCAGCATGACATGCA+GGG + Chr8:42713028-42713047 None:intergenic 45.0%
ACTCACTCTGTGTGTAGTGT+TGG + Chr8:42711596-42711615 None:intergenic 45.0%
ACTGTGCATGCTTGGTATCA+CGG - Chr8:42716340-42716359 MsG0880044477.01.T01:intron 45.0%
AGAAAATCTGTGAGTGTGGG+TGG + Chr8:42714287-42714306 None:intergenic 45.0%
AGAGTGTGGCACGATTATAC+AGG + Chr8:42715523-42715542 None:intergenic 45.0%
AGCCTAAGCTTAGTCAGACA+TGG - Chr8:42712737-42712756 MsG0880044477.01.T01:intron 45.0%
AGGCTGAAAACTTCGGAGAA+TGG - Chr8:42712004-42712023 MsG0880044477.01.T01:intron 45.0%
AGTGAGCTTGAGAAGTTTGC+TGG - Chr8:42714432-42714451 MsG0880044477.01.T01:intron 45.0%
ATGCTGCTGATAGAAGGACT+AGG + Chr8:42713080-42713099 None:intergenic 45.0%
CATAGCATGCTGCTGATAGA+AGG + Chr8:42713086-42713105 None:intergenic 45.0%
CATATTCACAGTTGCGGTAC+AGG + Chr8:42714939-42714958 None:intergenic 45.0%
CATTCTCAGACCTTGGTCAA+TGG - Chr8:42712224-42712243 MsG0880044477.01.T01:intron 45.0%
CGCAACTGTGAATATGTGGT+TGG - Chr8:42714943-42714962 MsG0880044477.01.T01:intron 45.0%
CGCTTCTTTCCAACACAACA+AGG - Chr8:42711659-42711678 MsG0880044477.01.T01:three_prime_UTR 45.0%
CGTGAGTTTCTTTGGCAAGA+AGG - Chr8:42713982-42714001 MsG0880044477.01.T01:intron 45.0%
CTCACTCTGTGTGTAGTGTT+GGG + Chr8:42711595-42711614 None:intergenic 45.0%
CTCTGGATGGAAATTCTCAG+TGG - Chr8:42715008-42715027 MsG0880044477.01.T01:intron 45.0%
CTGGAGCAAAACCCTTGATA+TGG + Chr8:42712941-42712960 None:intergenic 45.0%
GACCTTGGTCAATGGCTATT+TGG - Chr8:42712232-42712251 MsG0880044477.01.T01:intron 45.0%
GGTTTACTTACCAACTGGGA+AGG + Chr8:42715650-42715669 None:intergenic 45.0%
GTACCGCAACTGTGAATATG+TGG - Chr8:42714939-42714958 MsG0880044477.01.T01:intron 45.0%
GTGAATATGTGGTTGGAAGC+AGG - Chr8:42714950-42714969 MsG0880044477.01.T01:intron 45.0%
GTGTCTCATTTGAGTGTGCA+TGG - Chr8:42716217-42716236 MsG0880044477.01.T01:intron 45.0%
GTTCAACCGCTAATATCAGC+CGG - Chr8:42712662-42712681 MsG0880044477.01.T01:intron 45.0%
GTTGCTACATTCTCAGACCT+TGG - Chr8:42712217-42712236 MsG0880044477.01.T01:intron 45.0%
TCAAAACTGTCCTTCCCAGT+TGG - Chr8:42715637-42715656 MsG0880044477.01.T01:intron 45.0%
TCAGCATCTTTGTAAGGCAC+AGG + Chr8:42714896-42714915 None:intergenic 45.0%
TCCCAAATAGCCATTGACCA+AGG + Chr8:42712237-42712256 None:intergenic 45.0%
TCTAAACGCTGTCTGTCTGT+TGG - Chr8:42715678-42715697 MsG0880044477.01.T01:intron 45.0%
TGCCAAGAAGTGGTCATACT+GGG - Chr8:42716903-42716922 MsG0880044477.01.T01:CDS 45.0%
TGCCAGAGACAACTATTCTC+TGG - Chr8:42714991-42715010 MsG0880044477.01.T01:intron 45.0%
TGGAAAGAAGCGAGAGAGAA+TGG + Chr8:42711651-42711670 None:intergenic 45.0%
TGGTGCCTTCACTGAATTTG+TGG - Chr8:42716980-42716999 MsG0880044477.01.T01:intron 45.0%
TGTGTGTGTACCTTCTCTTG+TGG - Chr8:42714181-42714200 MsG0880044477.01.T01:intron 45.0%
TGTTGTTCCAGACCAGTGTT+TGG + Chr8:42714585-42714604 None:intergenic 45.0%
TTGGCAGTTCCTGTCGTAAA+GGG - Chr8:42714402-42714421 MsG0880044477.01.T01:intron 45.0%
TTTGGCAGTTCCTGTCGTAA+AGG - Chr8:42714401-42714420 MsG0880044477.01.T01:intron 45.0%
! AACACTGGTCTGGAACAACA+AGG - Chr8:42714585-42714604 MsG0880044477.01.T01:intron 45.0%
! AAGGAAGCGTGCAGAATTCA+AGG + Chr8:42713763-42713782 None:intergenic 45.0%
! CAGAGAGGAAAGCATGGTTA+AGG + Chr8:42713439-42713458 None:intergenic 45.0%
! CTGGTGATGATTCCAGTGAA+TGG - Chr8:42713793-42713812 MsG0880044477.01.T01:CDS 45.0%
! CTTTTCTTGCCCTTTACGAC+AGG + Chr8:42714414-42714433 None:intergenic 45.0%
! GATGGTTCATGGTGATGACA+AGG - Chr8:42714823-42714842 MsG0880044477.01.T01:intron 45.0%
! TATCAAGGGTTTTGCTCCAG+AGG - Chr8:42712941-42712960 MsG0880044477.01.T01:intron 45.0%
! TCATGGTGATGACAAGGGAT+TGG - Chr8:42714829-42714848 MsG0880044477.01.T01:intron 45.0%
!! ACGGTGTTACCTTGTTGTGT+TGG + Chr8:42711671-42711690 None:intergenic 45.0%
!! TGTAGGTGGTGGAAAGAAGA+AGG - Chr8:42711942-42711961 MsG0880044477.01.T01:intron 45.0%
!!! AAAATTTTCAAAAAATTTTT+TGG + Chr8:42716663-42716682 None:intergenic 5.0%
AACGCATGCACATGAAGCAG+AGG + Chr8:42714238-42714257 None:intergenic 50.0%
AAGGATTGAAATCGGGCCCA+AGG - Chr8:42715051-42715070 MsG0880044477.01.T01:intron 50.0%
AATGGAACGTGCAAGAGCGA+TGG + Chr8:42711633-42711652 None:intergenic 50.0%
ACCCAAGCAACCTGGGTAAA+GGG + Chr8:42713223-42713242 None:intergenic 50.0%
ACGCATGCACATGAAGCAGA+GGG + Chr8:42714237-42714256 None:intergenic 50.0%
AGCAAGGACAAAGGTGAGAC+AGG - Chr8:42716076-42716095 MsG0880044477.01.T01:intron 50.0%
ATCGTGCCACACTCTGATTG+AGG - Chr8:42715528-42715547 MsG0880044477.01.T01:intron 50.0%
ATTTGGTCACCCAAGCAACC+TGG + Chr8:42713231-42713250 None:intergenic 50.0%
CAATGGTCTGGCAGAACTCA+TGG - Chr8:42714683-42714702 MsG0880044477.01.T01:CDS 50.0%
CACTATCACGACGAACAGCA+CGG + Chr8:42715207-42715226 None:intergenic 50.0%
CAGTATGACCACTTCTTGGC+AGG + Chr8:42716904-42716923 None:intergenic 50.0%
CTATCAGCAGCATGCTATGC+TGG - Chr8:42713087-42713106 MsG0880044477.01.T01:intron 50.0%
CTCGTCATCCTTCACAATGG+CGG - Chr8:42711769-42711788 MsG0880044477.01.T01:intron 50.0%
CTGCCAAGAAGTGGTCATAC+TGG - Chr8:42716902-42716921 MsG0880044477.01.T01:CDS 50.0%
CTTCGGAGAATGGTATTCCG+AGG - Chr8:42712014-42712033 MsG0880044477.01.T01:intron 50.0%
GCAATCCCACACCATTCATC+AGG - Chr8:42713398-42713417 MsG0880044477.01.T01:intron 50.0%
GCAGGAGTCGTGAGTTTCTT+TGG - Chr8:42713974-42713993 MsG0880044477.01.T01:intron 50.0%
GCATGCTATGCTGGATGATC+TGG - Chr8:42713096-42713115 MsG0880044477.01.T01:intron 50.0%
GCCAAGAAGTGGTCATACTG+GGG - Chr8:42716904-42716923 MsG0880044477.01.T01:CDS 50.0%
GGATACAGTAGTACTCCCTC+CGG - Chr8:42716421-42716440 MsG0880044477.01.T01:intron 50.0%
GGCCCGATTTCAATCCTTAG+AGG + Chr8:42715049-42715068 None:intergenic 50.0%
GTGCTCGTCATCCTTCACAA+TGG - Chr8:42711766-42711785 MsG0880044477.01.T01:intron 50.0%
GTTGCTTGGGTGACCAAATC+TGG - Chr8:42713232-42713251 MsG0880044477.01.T01:intron 50.0%
GTTGTCTCTGGCATCTGACT+TGG + Chr8:42714984-42715003 None:intergenic 50.0%
TCAGACACACACCTCAACAC+TGG + Chr8:42714472-42714491 None:intergenic 50.0%
TCCCTGCATGTCATGCTGAT+TGG - Chr8:42713024-42713043 MsG0880044477.01.T01:intron 50.0%
TCGTCATCCTTCACAATGGC+GGG - Chr8:42711770-42711789 MsG0880044477.01.T01:intron 50.0%
TTTGGTCACCCAAGCAACCT+GGG + Chr8:42713230-42713249 None:intergenic 50.0%
! ACAGATTGGGGTGATGGTGA+TGG - Chr8:42714805-42714824 MsG0880044477.01.T01:intron 50.0%
! GAAAGCACACGGTGCCTAAA+AGG + Chr8:42716869-42716888 None:intergenic 50.0%
!! GAGCTTGAGAAGTTTGCTGG+TGG - Chr8:42714435-42714454 MsG0880044477.01.T01:intron 50.0%
CACCCAAGCAACCTGGGTAA+AGG + Chr8:42713224-42713243 None:intergenic 55.0%
CATACCTCCTCGTCACACCA+AGG + Chr8:42715401-42715420 None:intergenic 55.0%
CATGCTTGGTATCACGGTGG+AGG - Chr8:42716346-42716365 MsG0880044477.01.T01:intron 55.0%
CGGGGAGTTCTGCTGATCAA+AGG + Chr8:42716123-42716142 None:intergenic 55.0%
CGTCATCCTTCACAATGGCG+GGG - Chr8:42711771-42711790 MsG0880044477.01.T01:intron 55.0%
CTTCACGGAGACCCATTCAC+TGG + Chr8:42713808-42713827 None:intergenic 55.0%
GCCCCAGTATGACCACTTCT+TGG + Chr8:42716908-42716927 None:intergenic 55.0%
GCCCTTTACCCAGGTTGCTT+GGG - Chr8:42713219-42713238 MsG0880044477.01.T01:intron 55.0%
GTGCATGCTTGGTATCACGG+TGG - Chr8:42716343-42716362 MsG0880044477.01.T01:intron 55.0%
TGCCCTTTACCCAGGTTGCT+TGG - Chr8:42713218-42713237 MsG0880044477.01.T01:intron 55.0%
TTGATCAGCAGAACTCCCCG+AGG - Chr8:42716123-42716142 MsG0880044477.01.T01:intron 55.0%
! CGTGCTGTTCGTCGTGATAG+TGG - Chr8:42715205-42715224 MsG0880044477.01.T01:intron 55.0%
! CTTAGCTCCTTGGTGTGACG+AGG - Chr8:42715391-42715410 MsG0880044477.01.T01:CDS 55.0%
!! AAGAGCGATGGTGCCGTAAG+AGG + Chr8:42711621-42711640 None:intergenic 55.0%
!! GGGGTGATGGTGATGGTTCA+TGG - Chr8:42714812-42714831 MsG0880044477.01.T01:intron 55.0%
ACCGTGTGCTTTCGTCAGGC+AGG - Chr8:42716876-42716895 MsG0880044477.01.T01:CDS 60.0%
ATCGGTCCCCGCCATTGTGA+AGG + Chr8:42711780-42711799 None:intergenic 60.0%
! AGCTCCTTGGTGTGACGAGG+AGG - Chr8:42715394-42715413 MsG0880044477.01.T01:CDS 60.0%
! AGGCACCGTGTGCTTTCGTC+AGG - Chr8:42716872-42716891 MsG0880044477.01.T01:CDS 60.0%
! GCCTGCCTGACGAAAGCACA+CGG + Chr8:42716880-42716899 None:intergenic 60.0%
GGCAGGCACCTGCCAAGAAG+TGG - Chr8:42716893-42716912 MsG0880044477.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 42711591 42717134 42711591 ID=MsG0880044477.01;Name=MsG0880044477.01
Chr8 mRNA 42711591 42717122 42711591 ID=MsG0880044477.01.T01;Parent=MsG0880044477.01;Name=MsG0880044477.01.T01;_AED=0.34;_eAED=0.38;_QI=82|0.63|0.75|1|0.63|0.58|12|188|438
Chr8 exon 42716856 42716965 42716856 ID=MsG0880044477.01.T01:exon:3369;Parent=MsG0880044477.01.T01
Chr8 exon 42717045 42717122 42717045 ID=MsG0880044477.01.T01:exon:3368;Parent=MsG0880044477.01.T01
Chr8 five_prime_UTR 42717045 42717122 42717045 ID=MsG0880044477.01.T01:five_prime_utr;Parent=MsG0880044477.01.T01
Chr8 five_prime_UTR 42716962 42716965 42716962 ID=MsG0880044477.01.T01:five_prime_utr;Parent=MsG0880044477.01.T01
Chr8 CDS 42716856 42716961 42716856 ID=MsG0880044477.01.T01:cds;Parent=MsG0880044477.01.T01
Chr8 CDS 42716690 42716778 42716690 ID=MsG0880044477.01.T01:cds;Parent=MsG0880044477.01.T01
Chr8 CDS 42716459 42716551 42716459 ID=MsG0880044477.01.T01:cds;Parent=MsG0880044477.01.T01
Chr8 CDS 42715763 42715879 42715763 ID=MsG0880044477.01.T01:cds;Parent=MsG0880044477.01.T01
Chr8 CDS 42715354 42715493 42715354 ID=MsG0880044477.01.T01:cds;Parent=MsG0880044477.01.T01
Chr8 CDS 42714626 42714773 42714626 ID=MsG0880044477.01.T01:cds;Parent=MsG0880044477.01.T01
Chr8 CDS 42714246 42714368 42714246 ID=MsG0880044477.01.T01:cds;Parent=MsG0880044477.01.T01
Chr8 CDS 42713635 42713916 42713635 ID=MsG0880044477.01.T01:cds;Parent=MsG0880044477.01.T01
Chr8 CDS 42713467 42713523 42713467 ID=MsG0880044477.01.T01:cds;Parent=MsG0880044477.01.T01
Chr8 CDS 42712581 42712669 42712581 ID=MsG0880044477.01.T01:cds;Parent=MsG0880044477.01.T01
Chr8 CDS 42711779 42711851 42711779 ID=MsG0880044477.01.T01:cds;Parent=MsG0880044477.01.T01
Chr8 three_prime_UTR 42711591 42711778 42711591 ID=MsG0880044477.01.T01:three_prime_utr;Parent=MsG0880044477.01.T01
Chr8 mRNA 42711591 42717134 42711591 ID=MsG0880044477.01.T02;Parent=MsG0880044477.01;Name=MsG0880044477.01.T02;_AED=0.33;_eAED=0.36;_QI=173|0.6|0.72|1|0.7|0.72|11|188|438
Chr8 exon 42716856 42717134 42716856 ID=MsG0880044477.01.T02:exon:3380;Parent=MsG0880044477.01.T02
Chr8 five_prime_UTR 42716962 42717134 42716962 ID=MsG0880044477.01.T02:five_prime_utr;Parent=MsG0880044477.01.T02
Chr8 CDS 42716856 42716961 42716856 ID=MsG0880044477.01.T02:cds;Parent=MsG0880044477.01.T02
Chr8 CDS 42716690 42716778 42716690 ID=MsG0880044477.01.T02:cds;Parent=MsG0880044477.01.T02
Chr8 CDS 42716459 42716551 42716459 ID=MsG0880044477.01.T02:cds;Parent=MsG0880044477.01.T02
Chr8 CDS 42715763 42715879 42715763 ID=MsG0880044477.01.T02:cds;Parent=MsG0880044477.01.T02
Chr8 CDS 42715354 42715493 42715354 ID=MsG0880044477.01.T02:cds;Parent=MsG0880044477.01.T02
Chr8 CDS 42714626 42714773 42714626 ID=MsG0880044477.01.T02:cds;Parent=MsG0880044477.01.T02
Chr8 CDS 42714246 42714368 42714246 ID=MsG0880044477.01.T02:cds;Parent=MsG0880044477.01.T02
Chr8 CDS 42713635 42713916 42713635 ID=MsG0880044477.01.T02:cds;Parent=MsG0880044477.01.T02
Chr8 CDS 42713467 42713523 42713467 ID=MsG0880044477.01.T02:cds;Parent=MsG0880044477.01.T02
Chr8 CDS 42712581 42712669 42712581 ID=MsG0880044477.01.T02:cds;Parent=MsG0880044477.01.T02
Chr8 CDS 42711779 42711851 42711779 ID=MsG0880044477.01.T02:cds;Parent=MsG0880044477.01.T02
Chr8 three_prime_UTR 42711591 42711778 42711591 ID=MsG0880044477.01.T02:three_prime_utr;Parent=MsG0880044477.01.T02
Gene Sequence

>MsG0880044477.01.T02

ATGTGCTCGTCATCCTTCACAATGGCGGGGACCGATGACAACAAAACACAACAATCCGCTGCAAAACCCCAAAAACAACCAAAACAACCAAAACCACAACAATCAGGTGGTGGAAAGAAGAAGGAAGTCAAGAAAGAAACTAGATTAGGTTTGACCAATAAGAAGGCTGAAAACTTCGGAGAATGGTATTCCGAGGTTGTTGTGAATGGGGAAATGATTGAGTACTATGATATTTCTGGTTGCTACATTCTCAGACCTTGGTCAATGGCTATTTGGGAGATTATGCAAGCGTTTTTTGATCCAGAAATAAAGAAAATGAAGATCAAGAACTGCTACTTCCCTCTGTTTGTTTCTAATACTGTTCTGGAAAAGGAGAAGGACCATATCAAGGGTTTTGCTCCAGAGGTTGCTTGGGTGACCAAATCTGGAGAATCTGATTTAGAGATTCCTATTGCTATTCGTCCAACTAGTGAAACTGTTATGTATCCTTACTACTCTAAGTGGATAAGGGGACATCGTGACTTGCCTTTGAAACTTAATCAGTGGGTACTTATACCAATTTTAATTGCAGGAGTCGTGAGTTTCTTTGGCAAGAAGGACACATGCTTTTGCAACAAAGGAGGAAGCAGATACAGAGGTATTCCATCAAATAGTTATTTCATGAATTGCTATCTTCTGTCTCTTTTCATTTGTGTTCTTGAGATTTTGGAATTATATCGGTGTATCTATGAAGAGTATTTGGCAGTTCCTGTCGTAAAGGGCAAGAAAAGTGAGCTTGAGAAGTTTGCTGGTGGACTTTACACTACCAGTGTTGAGATTGGGGTGATGGTGATGGTTCATGGTGATGACAAGGGATTGGTGCTGCCACCTAAAGTAGCTTCAGTTCAAGTCATTGTGATTCCTGTGCCTTACAAAGATGCTGATACTCAAGGAATCTTTGATGCCTGTACCGCAACTGTGAATATGTGGTTGGAAGCAGGAATTCGTGCCAAGTCAGATGCCAGAGACAACTATTCTCTGGATGGAAATTCTCAGTGGGAAATGAAAGGTGTTCCTCTAAGGATTGAAATCGGGCCCAAGGATTTAGCAAATAAGCAGGTCCGTGCTGTTCGTCGTGATAGTGGAGCAAAGATCGACATTGATAATGATGATTTGGAGGTGGAAAAATATGTTAAAGCAAGGACAAAGGTGAGACAGGAGCTGCAAAGACACTCTGTAGCCTTTGATCAGCAGAACTCCCCGAGGCACCGTGTGCTTTCGTCAGGCAGGCACCTGCCAAGAAGTGGTCATACTGGGGCAAAAGTTACTAGATCTTGA

>MsG0880044477.01.T01

ATGTGCTCGTCATCCTTCACAATGGCGGGGACCGATGACAACAAAACACAACAATCCGCTGCAAAACCCCAAAAACAACCAAAACAACCAAAACCACAACAATCAGGTGGTGGAAAGAAGAAGGAAGTCAAGAAAGAAACTAGATTAGGTTTGACCAATAAGAAGGCTGAAAACTTCGGAGAATGGTATTCCGAGGTTGTTGTGAATGGGGAAATGATTGAGTACTATGATATTTCTGGTTGCTACATTCTCAGACCTTGGTCAATGGCTATTTGGGAGATTATGCAAGCGTTTTTTGATCCAGAAATAAAGAAAATGAAGATCAAGAACTGCTACTTCCCTCTGTTTGTTTCTAATACTGTTCTGGAAAAGGAGAAGGACCATATCAAGGGTTTTGCTCCAGAGGTTGCTTGGGTGACCAAATCTGGAGAATCTGATTTAGAGATTCCTATTGCTATTCGTCCAACTAGTGAAACTGTTATGTATCCTTACTACTCTAAGTGGATAAGGGGACATCGTGACTTGCCTTTGAAACTTAATCAGTGGGTACTTATACCAATTTTAATTGCAGGAGTCGTGAGTTTCTTTGGCAAGAAGGACACATGCTTTTGCAACAAAGGAGGAAGCAGATACAGAGGTATTCCATCAAATAGTTATTTCATGAATTGCTATCTTCTGTCTCTTTTCATTTGTGTTCTTGAGATTTTGGAATTATATCGGTGTATCTATGAAGAGTATTTGGCAGTTCCTGTCGTAAAGGGCAAGAAAAGTGAGCTTGAGAAGTTTGCTGGTGGACTTTACACTACCAGTGTTGAGATTGGGGTGATGGTGATGGTTCATGGTGATGACAAGGGATTGGTGCTGCCACCTAAAGTAGCTTCAGTTCAAGTCATTGTGATTCCTGTGCCTTACAAAGATGCTGATACTCAAGGAATCTTTGATGCCTGTACCGCAACTGTGAATATGTGGTTGGAAGCAGGAATTCGTGCCAAGTCAGATGCCAGAGACAACTATTCTCTGGATGGAAATTCTCAGTGGGAAATGAAAGGTGTTCCTCTAAGGATTGAAATCGGGCCCAAGGATTTAGCAAATAAGCAGGTCCGTGCTGTTCGTCGTGATAGTGGAGCAAAGATCGACATTGATAATGATGATTTGGAGGTGGAAAAATATGTTAAAGCAAGGACAAAGGTGAGACAGGAGCTGCAAAGACACTCTGTAGCCTTTGATCAGCAGAACTCCCCGAGGCACCGTGTGCTTTCGTCAGGCAGGCACCTGCCAAGAAGTGGTCATACTGGGGCAAAAGTTACTAGATCTTGA

Protein sequence

>MsG0880044477.01.T02

MCSSSFTMAGTDDNKTQQSAAKPQKQPKQPKPQQSGGGKKKEVKKETRLGLTNKKAENFGEWYSEVVVNGEMIEYYDISGCYILRPWSMAIWEIMQAFFDPEIKKMKIKNCYFPLFVSNTVLEKEKDHIKGFAPEVAWVTKSGESDLEIPIAIRPTSETVMYPYYSKWIRGHRDLPLKLNQWVLIPILIAGVVSFFGKKDTCFCNKGGSRYRGIPSNSYFMNCYLLSLFICVLEILELYRCIYEEYLAVPVVKGKKSELEKFAGGLYTTSVEIGVMVMVHGDDKGLVLPPKVASVQVIVIPVPYKDADTQGIFDACTATVNMWLEAGIRAKSDARDNYSLDGNSQWEMKGVPLRIEIGPKDLANKQVRAVRRDSGAKIDIDNDDLEVEKYVKARTKVRQELQRHSVAFDQQNSPRHRVLSSGRHLPRSGHTGAKVTRS*

>MsG0880044477.01.T01

MCSSSFTMAGTDDNKTQQSAAKPQKQPKQPKPQQSGGGKKKEVKKETRLGLTNKKAENFGEWYSEVVVNGEMIEYYDISGCYILRPWSMAIWEIMQAFFDPEIKKMKIKNCYFPLFVSNTVLEKEKDHIKGFAPEVAWVTKSGESDLEIPIAIRPTSETVMYPYYSKWIRGHRDLPLKLNQWVLIPILIAGVVSFFGKKDTCFCNKGGSRYRGIPSNSYFMNCYLLSLFICVLEILELYRCIYEEYLAVPVVKGKKSELEKFAGGLYTTSVEIGVMVMVHGDDKGLVLPPKVASVQVIVIPVPYKDADTQGIFDACTATVNMWLEAGIRAKSDARDNYSLDGNSQWEMKGVPLRIEIGPKDLANKQVRAVRRDSGAKIDIDNDDLEVEKYVKARTKVRQELQRHSVAFDQQNSPRHRVLSSGRHLPRSGHTGAKVTRS*