AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025997.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025997.01.T01 MTR_5g037380 71.579 190 19 1 29 183 39 228 2.76e-90 263
MsG0580025997.01.T01 MTR_8g061950 41.954 174 64 2 39 177 51 222 1.15e-36 127
MsG0580025997.01.T01 MTR_7g065640 36.538 156 84 2 30 173 42 194 3.43e-30 110
MsG0580025997.01.T01 MTR_7g065230 38.728 173 73 5 19 165 34 199 2.93e-29 107
MsG0580025997.01.T01 MTR_7g065270 36.970 165 71 3 39 173 51 212 3.81e-28 105
MsG0580025997.01.T01 MTR_7g065590 36.702 188 77 5 19 173 34 212 4.82e-28 105
MsG0580025997.01.T01 MTR_7g065600 36.970 165 71 3 39 173 51 212 5.54e-28 104
MsG0580025997.01.T01 MTR_7g065290 36.970 165 71 3 39 173 51 212 1.83e-27 103
MsG0580025997.01.T01 MTR_7g065265 36.757 185 81 5 19 173 34 212 5.43e-27 102
MsG0580025997.01.T01 MTR_7g065660 33.908 174 82 3 30 173 42 212 3.77e-26 100
MsG0580025997.01.T01 MTR_7g065720 35.484 186 83 5 19 173 34 213 8.38e-26 99.0
MsG0580025997.01.T01 MTR_7g065630 35.714 168 79 3 40 181 70 234 1.14e-25 99.0
MsG0580025997.01.T01 MTR_7g065740 36.000 175 78 4 30 173 42 213 1.67e-25 98.6
MsG0580025997.01.T01 MTR_5g040430 35.196 179 77 5 29 171 41 216 4.44e-25 97.4
MsG0580025997.01.T01 MTR_2g070110 34.615 182 86 4 29 181 38 215 7.85e-25 96.3
MsG0580025997.01.T01 MTR_7g065710 35.196 179 82 6 22 173 34 205 1.07e-24 96.3
MsG0580025997.01.T01 MTR_1g090090 32.979 188 87 6 18 173 30 210 9.72e-24 93.6
MsG0580025997.01.T01 MTR_7g065260 37.580 157 65 4 39 165 58 211 1.33e-23 93.6
MsG0580025997.01.T01 MTR_2g070180 35.882 170 77 5 30 170 39 205 1.90e-23 92.8
MsG0580025997.01.T01 MTR_2g070140 33.708 178 86 5 29 177 22 196 2.11e-23 92.4
MsG0580025997.01.T01 MTR_8g087410 32.955 176 83 3 30 174 41 212 2.63e-23 92.8
MsG0580025997.01.T01 MTR_4g019790 31.148 183 93 3 29 181 41 220 2.92e-23 92.4
MsG0580025997.01.T01 MTR_2g070150 36.095 169 78 5 29 169 38 204 3.00e-23 92.0
MsG0580025997.01.T01 MTR_1g090100 30.612 196 97 4 18 181 29 217 3.08e-23 92.4
MsG0580025997.01.T01 MTR_2g070210 35.326 184 87 7 20 175 33 212 4.19e-23 92.0
MsG0580025997.01.T01 MTR_2g070200 47.170 106 47 3 37 139 46 145 4.91e-23 91.7
MsG0580025997.01.T01 MTR_7g065750 35.185 162 71 4 40 170 52 210 8.31e-23 91.3
MsG0580025997.01.T01 MTR_2g070060 31.319 182 93 4 29 181 38 216 1.01e-22 90.9
MsG0580025997.01.T01 MTR_3g467420 36.000 175 82 4 29 175 43 215 1.22e-22 90.9
MsG0580025997.01.T01 MTR_2g070070 55.263 76 32 2 29 104 38 111 1.54e-22 90.5
MsG0580025997.01.T01 MTR_7g065700 37.179 156 69 3 40 169 52 204 1.63e-22 90.5
MsG0580025997.01.T01 MTR_6g080440 33.143 175 82 3 30 173 38 208 2.32e-22 90.1
MsG0580025997.01.T01 MTR_7g065680 35.119 168 80 3 40 181 52 216 3.59e-22 89.7
MsG0580025997.01.T01 MTR_4g019780 31.977 172 82 3 39 179 52 219 1.11e-21 88.2
MsG0580025997.01.T01 MTR_1g090070 33.161 193 83 7 18 174 36 218 1.23e-21 88.2
MsG0580025997.01.T01 MTR_1g090060 31.746 189 88 4 18 173 30 210 2.59e-21 87.4
MsG0580025997.01.T01 MTR_2g070130 46.364 110 55 4 30 139 39 144 2.64e-21 87.4
MsG0580025997.01.T01 MTR_3g467430 34.659 176 83 6 29 175 43 215 3.91e-21 87.0
MsG0580025997.01.T01 MTR_2g070120 33.728 169 82 5 30 170 39 205 6.07e-21 86.3
MsG0580025997.01.T01 MTR_2g072120 55.224 67 28 1 38 104 1 65 7.06e-21 82.0
MsG0580025997.01.T01 MTR_1g090150 33.146 178 79 5 30 173 38 209 1.81e-20 85.1
MsG0580025997.01.T01 MTR_4g124130 51.190 84 39 2 17 100 27 108 2.08e-20 84.7
MsG0580025997.01.T01 MTR_5g076900 29.730 185 92 5 21 175 36 212 7.88e-19 80.9
MsG0580025997.01.T01 MTR_3g099757 31.429 175 87 5 29 173 39 210 8.98e-19 80.5
MsG0580025997.01.T01 MTR_8g087425 31.034 174 87 3 30 173 40 210 3.23e-18 79.3
MsG0580025997.01.T01 MTR_4g059730 32.124 193 90 8 18 177 31 215 3.89e-18 79.0
MsG0580025997.01.T01 MTR_5g037390 58.730 63 26 0 29 91 21 83 1.39e-17 74.3
MsG0580025997.01.T01 MTR_0186s0030 51.429 70 32 2 30 99 39 106 1.70e-17 75.5
MsG0580025997.01.T01 MTR_1g115195 31.016 187 85 5 20 171 32 209 2.18e-17 77.0
MsG0580025997.01.T01 MTR_8g056940 52.857 70 31 2 30 99 39 106 5.36e-17 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025997.01.T01 AT1G10360 45.000 180 63 4 30 174 40 218 2.48e-39 134
MsG0580025997.01.T01 AT1G10370 43.889 180 65 2 30 174 40 218 6.38e-38 130
MsG0580025997.01.T01 AT1G59700 37.566 189 79 3 20 173 35 219 2.02e-35 124
MsG0580025997.01.T01 AT1G59670 35.979 189 82 3 20 173 35 219 3.91e-34 120
MsG0580025997.01.T01 AT1G27130 38.251 183 76 2 27 174 40 220 4.65e-34 120
MsG0580025997.01.T01 AT1G27140 38.421 190 79 3 18 172 33 219 1.01e-32 117
MsG0580025997.01.T01 AT1G69930 35.500 200 80 4 14 174 35 224 9.20e-29 107
MsG0580025997.01.T01 AT1G69920 34.225 187 86 2 23 174 64 248 1.73e-26 101
MsG0580025997.01.T01 AT3G43800 34.043 188 95 3 19 177 30 217 3.74e-23 92.4
MsG0580025997.01.T01 AT1G17180 35.260 173 82 6 30 174 39 209 8.03e-23 91.3
MsG0580025997.01.T01 AT1G78380 34.483 174 84 5 29 174 38 209 8.30e-22 88.6
MsG0580025997.01.T01 AT3G09270 31.122 196 96 5 18 181 33 221 8.53e-22 88.6
MsG0580025997.01.T01 AT2G29490 29.891 184 93 3 30 181 42 221 1.31e-21 88.2
MsG0580025997.01.T01 AT1G78360 33.862 189 95 6 17 177 27 213 4.08e-21 86.7
MsG0580025997.01.T01 AT1G17170 33.143 175 80 5 30 173 39 207 1.33e-20 85.5
MsG0580025997.01.T01 AT1G78320 35.088 171 79 5 30 171 39 206 1.82e-20 85.1
MsG0580025997.01.T01 AT2G29470 27.807 187 93 4 30 181 43 222 4.30e-20 84.3
MsG0580025997.01.T01 AT1G78340 44.000 100 52 2 29 126 38 135 5.86e-20 83.6
MsG0580025997.01.T01 AT1G17190 55.556 72 30 2 30 101 40 109 1.24e-19 82.8
MsG0580025997.01.T01 AT1G78370 31.214 173 89 5 30 174 39 209 1.29e-19 82.8
MsG0580025997.01.T01 AT2G29420 28.814 177 93 4 30 176 44 217 1.07e-18 80.5
MsG0580025997.01.T01 AT1G74590 29.651 172 83 5 37 173 49 217 1.83e-18 80.1
MsG0580025997.01.T01 AT2G29480 38.393 112 59 4 31 139 43 147 2.09e-18 79.7
MsG0580025997.01.T01 AT5G62480 45.263 95 42 2 40 134 53 137 4.71e-18 79.0
MsG0580025997.01.T01 AT2G29460 45.714 70 35 1 30 99 42 108 5.07e-17 76.3
MsG0580025997.01.T01 AT1G53680 33.333 180 84 6 30 177 42 217 1.55e-16 74.7
MsG0580025997.01.T01 AT2G29450 32.727 110 71 1 30 139 41 147 2.86e-16 73.9
MsG0580025997.01.T01 AT2G29440 45.833 72 36 1 30 101 41 109 2.79e-15 71.2

Find 45 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCACAAGTTTATCAGTTTC+TGG 0.176738 5:+28884131 None:intergenic
ATCGAGCCAGTGCTAGATTT+TGG 0.182535 5:-28885735 MsG0580025997.01.T01:CDS
TTGAATATATTGATGAAGTT+TGG 0.240973 5:-28885801 MsG0580025997.01.T01:CDS
AGGGTTAAAGAGAAATTTAC+TGG 0.266113 5:-28884242 MsG0580025997.01.T01:CDS
AAACTCCTGCTTTGGTGAAA+TGG 0.308703 5:-28884196 MsG0580025997.01.T01:CDS
AAAATCCCAGTTCTCATTCA+TGG 0.351236 5:-28885856 MsG0580025997.01.T01:CDS
GCGGCGCACGGCTGAGAGAT+GGG 0.389595 5:-28888370 MsG0580025997.01.T01:CDS
GGGTTGGGAGGGAATGCGTC+CGG 0.393125 5:-28888348 MsG0580025997.01.T01:CDS
TTATCTCCATGAATGAGAAC+TGG 0.409182 5:+28885850 None:intergenic
TGCTGCTCATCCTGCTGTGA+AGG 0.409846 5:-28884162 MsG0580025997.01.T01:CDS
AACTCCTGCTTTGGTGAAAT+GGG 0.410113 5:-28884195 MsG0580025997.01.T01:CDS
GAAATTAGAAGAAGAAAGAA+TGG 0.413529 5:-28888322 MsG0580025997.01.T01:CDS
GGTTGGGAGGGAATGCGTCC+GGG 0.421756 5:-28888347 MsG0580025997.01.T01:CDS
GGCGGCGCACGGCTGAGAGA+TGG 0.434835 5:-28888371 MsG0580025997.01.T01:CDS
GCATTTGAAGGAAGGATTGA+GGG 0.446813 5:+28885763 None:intergenic
CTGTACAATTCCCTACGAAA+TGG 0.454126 5:-28884432 MsG0580025997.01.T01:CDS
GTTGGGAGGGAATGCGTCCG+GGG 0.469586 5:-28888346 MsG0580025997.01.T01:CDS
TTCTTCTTCTAATTTCTCCC+CGG 0.469633 5:+28888329 None:intergenic
TGAAGCTAAAACTCCTGCTT+TGG 0.478097 5:-28884204 MsG0580025997.01.T01:CDS
TATTATTGCAGATTCACAAA+TGG 0.479491 5:+28885825 None:intergenic
GGCTACCTACATCGATGATA+AGG 0.485441 5:-28885713 MsG0580025997.01.T01:intron
AGCAAATAAACCATTTCGTA+GGG 0.493313 5:+28884422 None:intergenic
TCAGCCCATTTCACCAAAGC+AGG 0.493696 5:+28884191 None:intergenic
CGGCGCACGGCTGAGAGATG+GGG 0.495735 5:-28888369 MsG0580025997.01.T01:CDS
CTGGTGTATGTGGCGGCGCA+CGG 0.503421 5:-28888382 None:intergenic
GAGCAAATAAACCATTTCGT+AGG 0.505314 5:+28884421 None:intergenic
AGCATTTGAAGGAAGGATTG+AGG 0.510266 5:+28885762 None:intergenic
GCTCGATCATAAGCATTTGA+AGG 0.517556 5:+28885751 None:intergenic
AGAGAAATTTACTGGAGAGA+AGG 0.518055 5:-28884234 MsG0580025997.01.T01:CDS
GCTGCTCATCCTGCTGTGAA+GGG 0.518550 5:-28884161 MsG0580025997.01.T01:CDS
GAAGAAGAAAGAATGGGTGT+TGG 0.524238 5:-28888315 MsG0580025997.01.T01:CDS
GGTAGAATTCCCTTCACAGC+AGG 0.524477 5:+28884152 None:intergenic
GATCATAAGCATTTGAAGGA+AGG 0.533721 5:+28885755 None:intergenic
AACAGCAGCAGCTATAGCTA+AGG 0.547314 5:+28884103 None:intergenic
AAATTAGAAGAAGAAAGAAT+GGG 0.557372 5:-28888321 MsG0580025997.01.T01:CDS
TATCTCACATTCCTCTACTT+AGG 0.557566 5:+28884080 None:intergenic
TAATACCTTATCATCGATGT+AGG 0.558338 5:+28885708 None:intergenic
ACCAGAAACTGATAAACTTG+TGG 0.558982 5:-28884132 MsG0580025997.01.T01:CDS
TATCTCCATGAATGAGAACT+GGG 0.572303 5:+28885851 None:intergenic
GGTAGCCCAAAATCTAGCAC+TGG 0.582048 5:+28885729 None:intergenic
CTGCTGCTGTTCCTAAGTAG+AGG 0.599645 5:-28884091 None:intergenic
GGCGCACGGCTGAGAGATGG+GGG 0.603848 5:-28888368 MsG0580025997.01.T01:CDS
AAACAGCGTCTGAGTAGTGA+AGG 0.630075 5:-28888285 MsG0580025997.01.T01:intron
AACTAGCAGAAGTGCTTGTG+AGG 0.644124 5:-28884365 MsG0580025997.01.T01:intron
GTGGTGACTGGTGTATGTGG+CGG 0.672383 5:-28888389 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATAAATGTATAAGAT+TGG + Chr5:28885661-28885680 None:intergenic 10.0%
!! AAAATTAAAATTTACAATAG+GGG + Chr5:28885632-28885651 None:intergenic 10.0%
!! AATTTAAAAACCAATATATT+TGG + Chr5:28886838-28886857 None:intergenic 10.0%
!! GTAAAATTAAAATTTACAAT+AGG + Chr5:28885634-28885653 None:intergenic 10.0%
!! TTCTATATAAACAAATTTAA+AGG + Chr5:28886916-28886935 None:intergenic 10.0%
!!! AATTTATTTATTTAAAGCAA+AGG + Chr5:28886190-28886209 None:intergenic 10.0%
!!! TAAATTTGTTTATATAGAAT+TGG - Chr5:28886917-28886936 MsG0580025997.01.T01:intron 10.0%
!!! TAACTTTTAAAAATCAATAA+TGG + Chr5:28885606-28885625 None:intergenic 10.0%
!! AAATTAAAATTTACAATAGG+GGG + Chr5:28885631-28885650 None:intergenic 15.0%
!! ATAAAATCAATTATTCTACA+CGG - Chr5:28886962-28886981 MsG0580025997.01.T01:intron 15.0%
!! TATTTAGTGTTTACTAAATA+TGG + Chr5:28887679-28887698 None:intergenic 15.0%
!! TATTTATAAATGTATTGAGA+CGG - Chr5:28885694-28885713 MsG0580025997.01.T01:intron 15.0%
!! TTTCTTTCATATAACTTAAA+AGG - Chr5:28886350-28886369 MsG0580025997.01.T01:intron 15.0%
!!! AAAGTGTTTTTTTTTAATAG+GGG + Chr5:28887058-28887077 None:intergenic 15.0%
!!! AATGATATTTGATAACAATA+AGG - Chr5:28885096-28885115 MsG0580025997.01.T01:intron 15.0%
!!! ATTTTTTTATCAATAGAGTA+TGG + Chr5:28885809-28885828 None:intergenic 15.0%
!!! GAAAGTGTTTTTTTTTAATA+GGG + Chr5:28887059-28887078 None:intergenic 15.0%
!!! TGATATTATTTCTCTATTTT+TGG - Chr5:28887987-28888006 MsG0580025997.01.T01:intron 15.0%
!! AAATTAGAAGAAGAAAGAAT+GGG - Chr5:28884148-28884167 MsG0580025997.01.T01:CDS 20.0%
!! AATATGGAATAATCTAAAGA+TGG + Chr5:28887663-28887682 None:intergenic 20.0%
!! AGAATAATATATGTCTCATA+CGG - Chr5:28884577-28884596 MsG0580025997.01.T01:intron 20.0%
!! CAAACCTTAATTATATTAGA+AGG + Chr5:28886990-28887009 None:intergenic 20.0%
!! CTAAAGAATAAATCCTAAAT+CGG - Chr5:28887311-28887330 MsG0580025997.01.T01:intron 20.0%
!! TAAGGTTAGTAAAATGAATA+AGG + Chr5:28886796-28886815 None:intergenic 20.0%
!! TACAATATCTTTACTCAAAT+GGG + Chr5:28885234-28885253 None:intergenic 20.0%
!! TAGAATTTGATGAAACATTA+AGG + Chr5:28885015-28885034 None:intergenic 20.0%
!! TAGAGAAAATGTTCATAATT+TGG - Chr5:28884478-28884497 MsG0580025997.01.T01:intron 20.0%
!! TAGGATTAATCCAAATATAT+TGG - Chr5:28886825-28886844 MsG0580025997.01.T01:intron 20.0%
!! TTAATCCTAAAATTTCACTA+AGG + Chr5:28886814-28886833 None:intergenic 20.0%
!! TTGAATATATTGATGAAGTT+TGG - Chr5:28886668-28886687 MsG0580025997.01.T01:intron 20.0%
!! TTGTATCTTATAAGAGTAAA+AGG - Chr5:28887819-28887838 MsG0580025997.01.T01:intron 20.0%
!!! AAGTGTTTTTTTTTAATAGG+GGG + Chr5:28887057-28887076 None:intergenic 20.0%
!!! ATCAGAAATATTTTACTAGA+CGG + Chr5:28886429-28886448 None:intergenic 20.0%
!!! ATTATGAACATTTTCTCTAA+TGG + Chr5:28884477-28884496 None:intergenic 20.0%
!!! ATTGATTCAATATGATATAG+TGG + Chr5:28887968-28887987 None:intergenic 20.0%
!!! CAATAAATTTTATCAACTTC+TGG + Chr5:28887848-28887867 None:intergenic 20.0%
!!! GGAAAGTGTTTTTTTTTAAT+AGG + Chr5:28887060-28887079 None:intergenic 20.0%
!!! TATTTATTTAAAGCAAAGGT+GGG + Chr5:28886186-28886205 None:intergenic 20.0%
!!! TTATTTATTTAAAGCAAAGG+TGG + Chr5:28886187-28886206 None:intergenic 20.0%
!!! TTGGAGTATAATATTGTTTT+AGG - Chr5:28884240-28884259 MsG0580025997.01.T01:CDS 20.0%
!!! TTTTTTTTTCTTCTTCTTGA+AGG + Chr5:28886399-28886418 None:intergenic 20.0%
! AAATCGAGATAATAGATTTG+CGG + Chr5:28886332-28886351 None:intergenic 25.0%
! AACAATGATAGAAAGAGAAA+AGG - Chr5:28886017-28886036 MsG0580025997.01.T01:intron 25.0%
! AAGACCAGAATACAAATATT+TGG + Chr5:28887274-28887293 None:intergenic 25.0%
! AATAGAAAGAGAGAAAAAGA+AGG + Chr5:28885286-28885305 None:intergenic 25.0%
! AGCAAATCAATATTCAATGT+AGG + Chr5:28884952-28884971 None:intergenic 25.0%
! ATAGTTGTTAATCATTGTCA+AGG + Chr5:28884648-28884667 None:intergenic 25.0%
! GAAATTAGAAGAAGAAAGAA+TGG - Chr5:28884147-28884166 MsG0580025997.01.T01:CDS 25.0%
! GATCTTTATACATCAATGTA+AGG + Chr5:28885167-28885186 None:intergenic 25.0%
! GATGAAGTTTGGAAAAATAA+TGG - Chr5:28886679-28886698 MsG0580025997.01.T01:intron 25.0%
! GCAAATCAATATTCAATGTA+GGG + Chr5:28884951-28884970 None:intergenic 25.0%
! GGTACCTTCTAATATAATTA+AGG - Chr5:28886983-28887002 MsG0580025997.01.T01:intron 25.0%
! GTACAATATCTTTACTCAAA+TGG + Chr5:28885235-28885254 None:intergenic 25.0%
! GTTTAGTCATTGAAAAATGT+TGG - Chr5:28887375-28887394 MsG0580025997.01.T01:intron 25.0%
! TAGTTGTTAATCATTGTCAA+GGG + Chr5:28884647-28884666 None:intergenic 25.0%
! TATTATTGCAGATTCACAAA+TGG + Chr5:28886647-28886666 None:intergenic 25.0%
! TGTGTCATGTAATAATTGTA+AGG + Chr5:28886268-28886287 None:intergenic 25.0%
! TTTGATACTTCAACTATAGA+GGG + Chr5:28885874-28885893 None:intergenic 25.0%
!! ACAAATGACTTAAAGCTTTT+GGG - Chr5:28886463-28886482 MsG0580025997.01.T01:intron 25.0%
!! ACTAACCTTAGTGAAATTTT+AGG - Chr5:28886806-28886825 MsG0580025997.01.T01:intron 25.0%
!! ATTTGCTAAAGTTCTTGAAA+GGG - Chr5:28884965-28884984 MsG0580025997.01.T01:intron 25.0%
!! CGATTTAGGATTTATTCTTT+AGG + Chr5:28887313-28887332 None:intergenic 25.0%
!! CTTTACAAGTCAATTTTGTA+TGG - Chr5:28887887-28887906 MsG0580025997.01.T01:intron 25.0%
!! TACAAATGACTTAAAGCTTT+TGG - Chr5:28886462-28886481 MsG0580025997.01.T01:intron 25.0%
!! TCAATAATGGAAGAAACTAT+AGG + Chr5:28885593-28885612 None:intergenic 25.0%
!! TCAGAAATATTTTACTAGAC+GGG + Chr5:28886428-28886447 None:intergenic 25.0%
!! TTCTTTTTCTCTCTTTCTAT+TGG - Chr5:28885285-28885304 MsG0580025997.01.T01:intron 25.0%
!! TTTTCTCTTTCTATCATTGT+TGG + Chr5:28886018-28886037 None:intergenic 25.0%
!! TTTTGATACTTCAACTATAG+AGG + Chr5:28885875-28885894 None:intergenic 25.0%
!!! GTTTTGTGATTTGATAATTG+CGG - Chr5:28885060-28885079 MsG0580025997.01.T01:intron 25.0%
AAAACGGTGTATTTGATTGA+AGG - Chr5:28887247-28887266 MsG0580025997.01.T01:intron 30.0%
AAATTCTAACCAAGTGACTT+GGG - Chr5:28885027-28885046 MsG0580025997.01.T01:intron 30.0%
AACATAACAACATGTCAACA+TGG - Chr5:28887145-28887164 MsG0580025997.01.T01:intron 30.0%
AATATCCACAATACGATGAA+AGG + Chr5:28886125-28886144 None:intergenic 30.0%
AATCCAAACCTTTGATTGAA+AGG + Chr5:28886526-28886545 None:intergenic 30.0%
AATTTCACAAAACTTAGTGC+AGG + Chr5:28885357-28885376 None:intergenic 30.0%
ACAACTATGTGTTGTAAACA+AGG - Chr5:28884660-28884679 MsG0580025997.01.T01:intron 30.0%
AGAACAAGAAACTTGTATGA+GGG - Chr5:28887450-28887469 MsG0580025997.01.T01:intron 30.0%
AGACATATATTATTCTTCGC+AGG + Chr5:28884573-28884592 None:intergenic 30.0%
AGAGATTGTGTAATTTCAAC+AGG + Chr5:28884832-28884851 None:intergenic 30.0%
AGATTGTGTAATTTCAACAG+GGG + Chr5:28884830-28884849 None:intergenic 30.0%
AGCAAATAAACCATTTCGTA+GGG + Chr5:28888050-28888069 None:intergenic 30.0%
AGCCAGAAAATATGAATAGT+GGG + Chr5:28885986-28886005 None:intergenic 30.0%
AGGGTTAAAGAGAAATTTAC+TGG - Chr5:28888227-28888246 MsG0580025997.01.T01:intron 30.0%
AGGTCCAAATATTTGTATTC+TGG - Chr5:28887267-28887286 MsG0580025997.01.T01:intron 30.0%
ATCCAAACCTTTGATTGAAA+GGG + Chr5:28886525-28886544 None:intergenic 30.0%
ATTCCTTTCAATATGAGTGA+AGG + Chr5:28886944-28886963 None:intergenic 30.0%
CTTACATTTAATACGAGTCA+TGG - Chr5:28884608-28884627 MsG0580025997.01.T01:intron 30.0%
GAGATTGTGTAATTTCAACA+GGG + Chr5:28884831-28884850 None:intergenic 30.0%
GATAGACTAAATCCAGAAAA+CGG - Chr5:28887231-28887250 MsG0580025997.01.T01:intron 30.0%
GGATTAGAGTAATAATAGGA+AGG + Chr5:28887603-28887622 None:intergenic 30.0%
GTCATGTAATAATTGTAAGG+TGG + Chr5:28886265-28886284 None:intergenic 30.0%
TAATACCTTATCATCGATGT+AGG + Chr5:28886764-28886783 None:intergenic 30.0%
TAATTTGGCATATCAGCTTT+AGG - Chr5:28884493-28884512 MsG0580025997.01.T01:intron 30.0%
TAGAACAAGAAACTTGTATG+AGG - Chr5:28887449-28887468 MsG0580025997.01.T01:intron 30.0%
TATGACATGTCTACAACATA+TGG - Chr5:28884781-28884800 MsG0580025997.01.T01:intron 30.0%
TCGTGCAACCTTTAATTATA+GGG + Chr5:28887120-28887139 None:intergenic 30.0%
TGATAGACCCCTATAATTAA+AGG - Chr5:28887109-28887128 MsG0580025997.01.T01:intron 30.0%
TGCAAAGAAATGTTTACTCT+CGG + Chr5:28887624-28887643 None:intergenic 30.0%
TGTTGAAATTACACAATCTC+TGG - Chr5:28884831-28884850 MsG0580025997.01.T01:intron 30.0%
TTTGCTAAAGTTCTTGAAAG+GGG - Chr5:28884966-28884985 MsG0580025997.01.T01:intron 30.0%
! ATTAAGACTCAGTTGTTTCA+GGG + Chr5:28884444-28884463 None:intergenic 30.0%
! CTGAAGAAACAAATCACTTT+TGG + Chr5:28886576-28886595 None:intergenic 30.0%
! TATTAAGACTCAGTTGTTTC+AGG + Chr5:28884445-28884464 None:intergenic 30.0%
! TCTCGGATTAGAGTAATAAT+AGG + Chr5:28887607-28887626 None:intergenic 30.0%
! TGTGGATATTTTCTTATGAG+AGG - Chr5:28886135-28886154 MsG0580025997.01.T01:intron 30.0%
! TTAAGGTTTGAATGCACTTT+TGG - Chr5:28887000-28887019 MsG0580025997.01.T01:intron 30.0%
!! GATTTGCTAAAGTTCTTGAA+AGG - Chr5:28884964-28884983 MsG0580025997.01.T01:intron 30.0%
!! TCTGAGACAATTTTTACTAC+TGG + Chr5:28884523-28884542 None:intergenic 30.0%
!!! ACATTTTTTTTAAGCAGTGG+TGG - Chr5:28884214-28884233 MsG0580025997.01.T01:CDS 30.0%
!!! ACTGGGATTTTTTTGTAAAC+AGG + Chr5:28886604-28886623 None:intergenic 30.0%
!!! CATTTTTTTTAAGCAGTGGT+GGG - Chr5:28884215-28884234 MsG0580025997.01.T01:CDS 30.0%
!!! GGAACATTTTTTTTAAGCAG+TGG - Chr5:28884211-28884230 MsG0580025997.01.T01:CDS 30.0%
!!! GGATTTTTTTGTAAACAGGT+TGG + Chr5:28886600-28886619 None:intergenic 30.0%
!!! TGGTGCAATTTTTTGCAATT+GGG - Chr5:28888007-28888026 MsG0580025997.01.T01:intron 30.0%
!!! TTGGTGCAATTTTTTGCAAT+TGG - Chr5:28888006-28888025 MsG0580025997.01.T01:intron 30.0%
AAAATCCCAGTTCTCATTCA+TGG - Chr5:28886613-28886632 MsG0580025997.01.T01:intron 35.0%
AAAGTTCCATTGTAACCGTA+GGG - Chr5:28887342-28887361 MsG0580025997.01.T01:intron 35.0%
AATTCTAACCAAGTGACTTG+GGG - Chr5:28885028-28885047 MsG0580025997.01.T01:intron 35.0%
AATTGAAACACGACTACATG+TGG - Chr5:28884745-28884764 MsG0580025997.01.T01:intron 35.0%
ACATTTAATACGAGTCATGG+AGG - Chr5:28884611-28884630 MsG0580025997.01.T01:intron 35.0%
ACCAGAAACTGATAAACTTG+TGG - Chr5:28888337-28888356 MsG0580025997.01.T01:CDS 35.0%
AGAATAGCGTATGGATACAT+GGG - Chr5:28884716-28884735 MsG0580025997.01.T01:intron 35.0%
AGAGAAATGAGAATAGCGTA+TGG - Chr5:28884707-28884726 MsG0580025997.01.T01:intron 35.0%
AGAGAAATTTACTGGAGAGA+AGG - Chr5:28888235-28888254 MsG0580025997.01.T01:intron 35.0%
ATTTAATACGAGTCATGGAG+GGG - Chr5:28884613-28884632 MsG0580025997.01.T01:intron 35.0%
CAAATTCTAACCAAGTGACT+TGG - Chr5:28885026-28885045 MsG0580025997.01.T01:intron 35.0%
CAAATTGCCCTTTCAATCAA+AGG - Chr5:28886515-28886534 MsG0580025997.01.T01:intron 35.0%
CATTTAATACGAGTCATGGA+GGG - Chr5:28884612-28884631 MsG0580025997.01.T01:intron 35.0%
CCAGAAAATATGAATAGTGG+GGG + Chr5:28885984-28886003 None:intergenic 35.0%
CGTGCAACCTTTAATTATAG+GGG + Chr5:28887119-28887138 None:intergenic 35.0%
CTCGTGCAACCTTTAATTAT+AGG + Chr5:28887121-28887140 None:intergenic 35.0%
CTTTCTATCATTGTTGGCAT+TGG + Chr5:28886012-28886031 None:intergenic 35.0%
GAGAAGTTTCTAACATGTGT+AGG + Chr5:28885425-28885444 None:intergenic 35.0%
GAGCAAATAAACCATTTCGT+AGG + Chr5:28888051-28888070 None:intergenic 35.0%
GAGCCAGAAAATATGAATAG+TGG + Chr5:28885987-28886006 None:intergenic 35.0%
GATAAAAAAATGTTGCGCAC+TGG - Chr5:28885818-28885837 MsG0580025997.01.T01:CDS 35.0%
GATCATAAGCATTTGAAGGA+AGG + Chr5:28886717-28886736 None:intergenic 35.0%
GATTGTGTAATTTCAACAGG+GGG + Chr5:28884829-28884848 None:intergenic 35.0%
GCCAGAAAATATGAATAGTG+GGG + Chr5:28885985-28886004 None:intergenic 35.0%
GTTGACATGTTGTTATGTTC+TGG + Chr5:28887144-28887163 None:intergenic 35.0%
TATCTCCATGAATGAGAACT+GGG + Chr5:28886621-28886640 None:intergenic 35.0%
TATTGCACTCACATACAACA+TGG - Chr5:28885445-28885464 MsG0580025997.01.T01:intron 35.0%
TCATTCCTTTCATCGTATTG+TGG - Chr5:28886117-28886136 MsG0580025997.01.T01:intron 35.0%
TCCACAAGTTTATCAGTTTC+TGG + Chr5:28888341-28888360 None:intergenic 35.0%
TTATCTCCATGAATGAGAAC+TGG + Chr5:28886622-28886641 None:intergenic 35.0%
TTCTCATTTCTCTCTCTTAG+TGG + Chr5:28884700-28884719 None:intergenic 35.0%
TTCTTCTTCTAATTTCTCCC+CGG + Chr5:28884143-28884162 None:intergenic 35.0%
! AATGACTTAAAGCTTTTGGG+TGG - Chr5:28886466-28886485 MsG0580025997.01.T01:intron 35.0%
! ACTTTGACATTAGCCGATTT+AGG + Chr5:28887327-28887346 None:intergenic 35.0%
! ATATTTCTGATTCCAAGCGA+TGG - Chr5:28886438-28886457 MsG0580025997.01.T01:intron 35.0%
! CAATCAAATACACCGTTTTC+TGG + Chr5:28887246-28887265 None:intergenic 35.0%
! TTAAGACTCAGTTGTTTCAG+GGG + Chr5:28884443-28884462 None:intergenic 35.0%
!! ATGACTTAAAGCTTTTGGGT+GGG - Chr5:28886467-28886486 MsG0580025997.01.T01:intron 35.0%
!! ATGCTATTTGAGTTGGTTGA+GGG - Chr5:28888208-28888227 MsG0580025997.01.T01:intron 35.0%
!! CTTTTGGATGCTATTTGAGT+TGG - Chr5:28888201-28888220 MsG0580025997.01.T01:intron 35.0%
!! TGTTTTAGGCCCATAAGTTT+TGG - Chr5:28884254-28884273 MsG0580025997.01.T01:intron 35.0%
!!! GAGAGGTTTTCTTTTTTGAG+AGG - Chr5:28886152-28886171 MsG0580025997.01.T01:intron 35.0%
!!! GGCTTTGTTGATATTGCTTT+TGG - Chr5:28888185-28888204 MsG0580025997.01.T01:intron 35.0%
!!! TAAACATGTTTTGACCCCTA+CGG + Chr5:28887360-28887379 None:intergenic 35.0%
AAACTCCTGCTTTGGTGAAA+TGG - Chr5:28888273-28888292 MsG0580025997.01.T01:intron 40.0%
AACTCCTGCTTTGGTGAAAT+GGG - Chr5:28888274-28888293 MsG0580025997.01.T01:intron 40.0%
AAGTTCCATTGTAACCGTAG+GGG - Chr5:28887343-28887362 MsG0580025997.01.T01:intron 40.0%
AGCATTTGAAGGAAGGATTG+AGG + Chr5:28886710-28886729 None:intergenic 40.0%
AGGGGTCTATCAATTGCAAA+TGG + Chr5:28887101-28887120 None:intergenic 40.0%
ATTGCTACCATGGCAAACAT+AGG + Chr5:28887029-28887048 None:intergenic 40.0%
CAAAGTTCCATTGTAACCGT+AGG - Chr5:28887341-28887360 MsG0580025997.01.T01:intron 40.0%
CAAATGGGGACAAAGTTAGA+GGG + Chr5:28887085-28887104 None:intergenic 40.0%
CAATGTAGGGTACATACTTG+TGG + Chr5:28884938-28884957 None:intergenic 40.0%
CGAGATAATAGATTTGCGGT+AGG + Chr5:28886328-28886347 None:intergenic 40.0%
CTGTACAATTCCCTACGAAA+TGG - Chr5:28888037-28888056 MsG0580025997.01.T01:intron 40.0%
GAAGAAGAAAGAATGGGTGT+TGG - Chr5:28884154-28884173 MsG0580025997.01.T01:CDS 40.0%
GACTACATGTGGCTCAAAAT+TGG - Chr5:28884756-28884775 MsG0580025997.01.T01:intron 40.0%
GAGAATAGCGTATGGATACA+TGG - Chr5:28884715-28884734 MsG0580025997.01.T01:intron 40.0%
GCAAATAGTTCAACCGAGTT+GGG + Chr5:28884283-28884302 None:intergenic 40.0%
GCATTTGAAGGAAGGATTGA+GGG + Chr5:28886709-28886728 None:intergenic 40.0%
GCTCGATCATAAGCATTTGA+AGG + Chr5:28886721-28886740 None:intergenic 40.0%
GGGGTCTATCAATTGCAAAT+GGG + Chr5:28887100-28887119 None:intergenic 40.0%
GGGTCTATCAATTGCAAATG+GGG + Chr5:28887099-28887118 None:intergenic 40.0%
GGTCCTTCACTCATATTGAA+AGG - Chr5:28886938-28886957 MsG0580025997.01.T01:intron 40.0%
GGTGCATCTCATCGTATTAT+TGG + Chr5:28884352-28884371 None:intergenic 40.0%
TAGGGTACATACTTGTGGAT+TGG + Chr5:28884933-28884952 None:intergenic 40.0%
TCATTTCTCTCTCTTAGTGG+TGG + Chr5:28884697-28884716 None:intergenic 40.0%
TGAAGCTAAAACTCCTGCTT+TGG - Chr5:28888265-28888284 MsG0580025997.01.T01:intron 40.0%
TGCAAATAGTTCAACCGAGT+TGG + Chr5:28884284-28884303 None:intergenic 40.0%
TGCCCTTTCAATCAAAGGTT+TGG - Chr5:28886520-28886539 MsG0580025997.01.T01:intron 40.0%
TTCTTCTTGAAGGACTAGAC+AGG + Chr5:28886389-28886408 None:intergenic 40.0%
TTGCTACCATGGCAAACATA+GGG + Chr5:28887028-28887047 None:intergenic 40.0%
TTTAATACGAGTCATGGAGG+GGG - Chr5:28884614-28884633 MsG0580025997.01.T01:intron 40.0%
TTTCTATTGGCCAACAACCA+GGG - Chr5:28885298-28885317 MsG0580025997.01.T01:intron 40.0%
! CAGTGGAGAAAGGACTTTTT+GGG - Chr5:28888150-28888169 MsG0580025997.01.T01:intron 40.0%
! CCCCCACTATTCATATTTTC+TGG - Chr5:28885981-28886000 MsG0580025997.01.T01:intron 40.0%
! TCTATCATTGTTGGCATTGG+CGG + Chr5:28886009-28886028 None:intergenic 40.0%
!! CTTTTTGGGAGGAGAGAAAA+TGG - Chr5:28888164-28888183 MsG0580025997.01.T01:intron 40.0%
!! GATGCTATTTGAGTTGGTTG+AGG - Chr5:28888207-28888226 MsG0580025997.01.T01:intron 40.0%
!! TGACTTAAAGCTTTTGGGTG+GGG - Chr5:28886468-28886487 MsG0580025997.01.T01:intron 40.0%
!! TTTAGGCCCATAAGTTTTGG+AGG - Chr5:28884257-28884276 MsG0580025997.01.T01:intron 40.0%
!!! TTTTAAGCAGTGGTGGGTAT+TGG - Chr5:28884221-28884240 MsG0580025997.01.T01:CDS 40.0%
AAACAGCGTCTGAGTAGTGA+AGG - Chr5:28884184-28884203 MsG0580025997.01.T01:CDS 45.0%
AACAGCAGCAGCTATAGCTA+AGG + Chr5:28888369-28888388 None:intergenic 45.0%
AAGAAGCCAAAATTCCGCTG+CGG + Chr5:28887403-28887422 None:intergenic 45.0%
ACTTTGAACCCCAAGTCACT+TGG + Chr5:28885039-28885058 None:intergenic 45.0%
AGTCACATTCTCTTGCCTCA+TGG + Chr5:28884387-28884406 None:intergenic 45.0%
AGTCATTTGTAGCCATCGCT+TGG + Chr5:28886453-28886472 None:intergenic 45.0%
AGTTGGGCCTCCAAAACTTA+TGG + Chr5:28884267-28884286 None:intergenic 45.0%
ATTTGTGCCCTCACTGCAAA+TGG + Chr5:28886500-28886519 None:intergenic 45.0%
CGTCTGAGTAGTGAAGGTTA+GGG - Chr5:28884190-28884209 MsG0580025997.01.T01:CDS 45.0%
CTTTCTATTGGCCAACAACC+AGG - Chr5:28885297-28885316 MsG0580025997.01.T01:intron 45.0%
GATGTGTTGAACAAGAGCAG+TGG - Chr5:28888133-28888152 MsG0580025997.01.T01:intron 45.0%
GCAAATGGGGACAAAGTTAG+AGG + Chr5:28887086-28887105 None:intergenic 45.0%
GGCTACCTACATCGATGATA+AGG - Chr5:28886756-28886775 MsG0580025997.01.T01:intron 45.0%
GTCACATTCTCTTGCCTCAT+GGG + Chr5:28884386-28884405 None:intergenic 45.0%
GTCTCAGATAGAGCAATCAG+AGG - Chr5:28884535-28884554 MsG0580025997.01.T01:intron 45.0%
GTGTAATTTCAACAGGGGGA+TGG + Chr5:28884825-28884844 None:intergenic 45.0%
GTTCAGTCCATTTGCAGTGA+GGG - Chr5:28886490-28886509 MsG0580025997.01.T01:intron 45.0%
GTTGGGCCTCCAAAACTTAT+GGG + Chr5:28884266-28884285 None:intergenic 45.0%
TAATTGTAAGGTGGACCCAG+CGG + Chr5:28886256-28886275 None:intergenic 45.0%
TATTTGCACCTCCCCAAGAA+CGG - Chr5:28884296-28884315 MsG0580025997.01.T01:intron 45.0%
TCTAACATGTGTAGGCTGCA+TGG + Chr5:28885417-28885436 None:intergenic 45.0%
TGAACAAGAGCAGTGGAGAA+AGG - Chr5:28888140-28888159 MsG0580025997.01.T01:intron 45.0%
TGCTACCATGGCAAACATAG+GGG + Chr5:28887027-28887046 None:intergenic 45.0%
TTCTATTGGCCAACAACCAG+GGG - Chr5:28885299-28885318 MsG0580025997.01.T01:intron 45.0%
TTTGACCCCTACGGTTACAA+TGG + Chr5:28887351-28887370 None:intergenic 45.0%
! ATCGAGCCAGTGCTAGATTT+TGG - Chr5:28886734-28886753 MsG0580025997.01.T01:intron 45.0%
! GCAGTGGAGAAAGGACTTTT+TGG - Chr5:28888149-28888168 MsG0580025997.01.T01:intron 45.0%
! TAGGAAGGAGAGTACATGAG+AGG + Chr5:28887588-28887607 None:intergenic 45.0%
! TCGAGCCAGTGCTAGATTTT+GGG - Chr5:28886735-28886754 MsG0580025997.01.T01:intron 45.0%
!! AACTAGCAGAAGTGCTTGTG+AGG - Chr5:28888104-28888123 MsG0580025997.01.T01:intron 45.0%
!! GGTGTTGTTTCGCTTCGATT+CGG - Chr5:28885839-28885858 MsG0580025997.01.T01:CDS 45.0%
!! TGGAGAAAGGACTTTTTGGG+AGG - Chr5:28888153-28888172 MsG0580025997.01.T01:intron 45.0%
!!! TAAGTTTTGGAGGCCCAACT+CGG - Chr5:28884267-28884286 MsG0580025997.01.T01:intron 45.0%
!! ATATATATATATATATATGA+TGG - Chr5:28885956-28885975 MsG0580025997.01.T01:intron 5.0%
!! TAAAATTAAAATTTACAATA+GGG + Chr5:28885633-28885652 None:intergenic 5.0%
!! TTAAAATAGTTATTATTTAA+TGG - Chr5:28885120-28885139 MsG0580025997.01.T01:intron 5.0%
!! TTATAAAAATAATTACTAAA+TGG + Chr5:28885260-28885279 None:intergenic 5.0%
AATAGACAACACAGACCCGC+TGG - Chr5:28886237-28886256 MsG0580025997.01.T01:intron 50.0%
AATTGTAAGGTGGACCCAGC+GGG + Chr5:28886255-28886274 None:intergenic 50.0%
ACCTGAATCGAGAACCCATG+AGG - Chr5:28884369-28884388 MsG0580025997.01.T01:CDS 50.0%
AGAGCAATCAGAGGACGTGA+AGG - Chr5:28884544-28884563 MsG0580025997.01.T01:intron 50.0%
ATAGACAACACAGACCCGCT+GGG - Chr5:28886238-28886257 MsG0580025997.01.T01:intron 50.0%
ATTTGCACCTCCCCAAGAAC+GGG - Chr5:28884297-28884316 MsG0580025997.01.T01:intron 50.0%
GCGTCTGAGTAGTGAAGGTT+AGG - Chr5:28884189-28884208 MsG0580025997.01.T01:CDS 50.0%
GCTACCATGGCAAACATAGG+GGG + Chr5:28887026-28887045 None:intergenic 50.0%
GGGGGTCAAAATTGCTACCA+TGG + Chr5:28887039-28887058 None:intergenic 50.0%
GGTAGAATTCCCTTCACAGC+AGG + Chr5:28888320-28888339 None:intergenic 50.0%
GGTAGCCCAAAATCTAGCAC+TGG + Chr5:28886743-28886762 None:intergenic 50.0%
GGTTCAGTCCATTTGCAGTG+AGG - Chr5:28886489-28886508 MsG0580025997.01.T01:intron 50.0%
TCAGCCCATTTCACCAAAGC+AGG + Chr5:28888281-28888300 None:intergenic 50.0%
TGGGGACAAAGTTAGAGGGT+TGG + Chr5:28887081-28887100 None:intergenic 50.0%
! GGAGGCACATAGAGCTTAGT+GGG - Chr5:28885323-28885342 MsG0580025997.01.T01:intron 50.0%
!! AGCAGAAGTGCTTGTGAGGT+TGG - Chr5:28888108-28888127 MsG0580025997.01.T01:intron 50.0%
!! GAAAAATGTTGGTGCCGCAG+CGG - Chr5:28887386-28887405 MsG0580025997.01.T01:intron 50.0%
ATACGAGTCATGGAGGGGGA+CGG - Chr5:28884618-28884637 MsG0580025997.01.T01:intron 55.0%
CTCTCACCAGACCCGTTCTT+GGG + Chr5:28884311-28884330 None:intergenic 55.0%
GCCTCATGGGTTCTCGATTC+AGG + Chr5:28884373-28884392 None:intergenic 55.0%
GCTGCTCATCCTGCTGTGAA+GGG - Chr5:28888308-28888327 MsG0580025997.01.T01:CDS 55.0%
TATTGGCCAACAACCAGGGG+CGG - Chr5:28885302-28885321 MsG0580025997.01.T01:intron 55.0%
TCTCACCAGACCCGTTCTTG+GGG + Chr5:28884310-28884329 None:intergenic 55.0%
TGCTGCTCATCCTGCTGTGA+AGG - Chr5:28888307-28888326 MsG0580025997.01.T01:CDS 55.0%
TTGGCCCCCTATGTTTGCCA+TGG - Chr5:28887019-28887038 MsG0580025997.01.T01:intron 55.0%
! CGGAGGCACATAGAGCTTAG+TGG - Chr5:28885322-28885341 MsG0580025997.01.T01:intron 55.0%
!!! TTGGTGCCGCAGCGGAATTT+TGG - Chr5:28887394-28887413 MsG0580025997.01.T01:intron 55.0%
ACGGCTGAGAGATGGGGGTT+GGG - Chr5:28884106-28884125 MsG0580025997.01.T01:CDS 60.0%
CCAAGAACGGGTCTGGTGAG+AGG - Chr5:28884309-28884328 MsG0580025997.01.T01:intron 60.0%
CCTCTCACCAGACCCGTTCT+TGG + Chr5:28884312-28884331 None:intergenic 60.0%
CTGAGAGATGGGGGTTGGGA+GGG - Chr5:28884110-28884129 MsG0580025997.01.T01:CDS 60.0%
CACCAGACCCGTTCTTGGGG+AGG + Chr5:28884307-28884326 None:intergenic 65.0%
CACCTCCCCAAGAACGGGTC+TGG - Chr5:28884302-28884321 MsG0580025997.01.T01:intron 65.0%
CACGGCTGAGAGATGGGGGT+TGG - Chr5:28884105-28884124 MsG0580025997.01.T01:CDS 65.0%
GCTGAGAGATGGGGGTTGGG+AGG - Chr5:28884109-28884128 MsG0580025997.01.T01:CDS 65.0%
GGGTTGGGAGGGAATGCGTC+CGG - Chr5:28884121-28884140 MsG0580025997.01.T01:CDS 65.0%
GGTTGGGAGGGAATGCGTCC+GGG - Chr5:28884122-28884141 MsG0580025997.01.T01:CDS 65.0%
GTTGGGAGGGAATGCGTCCG+GGG - Chr5:28884123-28884142 MsG0580025997.01.T01:CDS 65.0%
CGGCGCACGGCTGAGAGATG+GGG - Chr5:28884100-28884119 MsG0580025997.01.T01:CDS 70.0%
GCGGCGCACGGCTGAGAGAT+GGG - Chr5:28884099-28884118 MsG0580025997.01.T01:CDS 70.0%
GCTCTATGTGCCTCCGCCCC+TGG + Chr5:28885318-28885337 None:intergenic 70.0%
GGCGCACGGCTGAGAGATGG+GGG - Chr5:28884101-28884120 MsG0580025997.01.T01:CDS 70.0%
GTGCCTCCGCCCCTGGTTGT+TGG + Chr5:28885311-28885330 None:intergenic 70.0%
TGGCCAACAACCAGGGGCGG+AGG - Chr5:28885305-28885324 MsG0580025997.01.T01:intron 70.0%
GGCGGCGCACGGCTGAGAGA+TGG - Chr5:28884098-28884117 MsG0580025997.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr5 gene 28884094 28888397 28884094 ID=MsG0580025997.01;Name=MsG0580025997.01
Chr5 mRNA 28884094 28888397 28884094 ID=MsG0580025997.01.T01;Parent=MsG0580025997.01;Name=MsG0580025997.01.T01;_AED=0.59;_eAED=0.59;_QI=0|0.33|0|0.75|1|1|4|0|183
Chr5 exon 28888286 28888397 28888286 ID=MsG0580025997.01.T01:exon:7038;Parent=MsG0580025997.01.T01
Chr5 exon 28885714 28885895 28885714 ID=MsG0580025997.01.T01:exon:7037;Parent=MsG0580025997.01.T01
Chr5 exon 28884366 28884454 28884366 ID=MsG0580025997.01.T01:exon:7036;Parent=MsG0580025997.01.T01
Chr5 exon 28884094 28884262 28884094 ID=MsG0580025997.01.T01:exon:7035;Parent=MsG0580025997.01.T01
Chr5 CDS 28888286 28888397 28888286 ID=MsG0580025997.01.T01:cds;Parent=MsG0580025997.01.T01
Chr5 CDS 28885714 28885895 28885714 ID=MsG0580025997.01.T01:cds;Parent=MsG0580025997.01.T01
Chr5 CDS 28884366 28884454 28884366 ID=MsG0580025997.01.T01:cds;Parent=MsG0580025997.01.T01
Chr5 CDS 28884094 28884262 28884094 ID=MsG0580025997.01.T01:cds;Parent=MsG0580025997.01.T01
Gene Sequence

>MsG0580025997.01.T01

ATGTGGCGGCGCACGGCTGAGAGATGGGGGTTGGGAGGGAATGCGTCCGGGGAGAAATTAGAAGAAGAAAGAATGGGTGTTGGAAGAACGAAACAGCGTCTGAGTAGTGAAGTCCAACCTGTTTACAAAAAAATCCCAGTTCTCATTCATGGAGATAAAGCCATTTGTGAATCTGCAATAATAGTTGAATATATTGATGAAGTTTGGAAAAATAATGGTACTCCCTCAATCCTTCCTTCAAATGCTTATGATCGAGCCAGTGCTAGATTTTGGGCTACCTACATCGATGATAAGCTGTACAATTCCCTACGAAATGGTTTATTTGCTCAAGACATTGAGACAAAGAAGAAACATTTTGATGAACTAGCAGAAGTGCTTGTGAGGGTTAAAGAGAAATTTACTGGAGAGAAGGCTTTTGATGAAGCTAAAACTCCTGCTTTGGTGAAATGGGCTGAAGCTTTTGCTGCTCATCCTGCTGTGAAGGGAATTCTACCAGAAACTGATAAACTTGTGGAGTATGCCTTAGCTATAGCTGCTGCTGTTCCTAAGTAG

Protein sequence

>MsG0580025997.01.T01

MWRRTAERWGLGGNASGEKLEEERMGVGRTKQRLSSEVQPVYKKIPVLIHGDKAICESAIIVEYIDEVWKNNGTPSILPSNAYDRASARFWATYIDDKLYNSLRNGLFAQDIETKKKHFDELAEVLVRVKEKFTGEKAFDEAKTPALVKWAEAFAAHPAVKGILPETDKLVEYALAIAAAVPK*