Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048404.01.T01 | XP_013459273.1 | 91.566 | 83 | 7 | 0 | 40 | 122 | 115 | 197 | 1.16E-45 | 156 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048404.01.T01 | A0A072UTZ0 | 91.566 | 83 | 7 | 0 | 40 | 122 | 115 | 197 | 5.52e-46 | 156 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047869.01 | MsG0080048404.01 | 0.816361 | 5.752978e-52 | 4.068001e-49 |
| MsG0080047944.01 | MsG0080048404.01 | 0.801682 | 8.022593e-49 | 3.854906e-46 |
| MsG0080048113.01 | MsG0080048404.01 | 0.817250 | 3.634338e-52 | 2.633082e-49 |
| MsG0080048404.01 | MsG0080048463.01 | 0.817007 | 4.121835e-52 | 2.966646e-49 |
| MsG0080048404.01 | MsG0080048618.01 | 0.843946 | 1.024882e-58 | 1.629385e-55 |
| MsG0080048404.01 | MsG0080048683.01 | 0.828484 | 8.763197e-55 | 8.722110e-52 |
| MsG0080048404.01 | MsG0080048784.01 | 0.804108 | 2.530685e-49 | 1.293805e-46 |
| MsG0080048404.01 | MsG0080048826.01 | 0.817530 | 3.144111e-52 | 2.295424e-49 |
| MsG0080048404.01 | MsG0080048856.01 | 0.824446 | 8.035355e-54 | 7.118570e-51 |
| MsG0080048404.01 | MsG0080049148.01 | 0.800110 | 1.680638e-48 | 7.760527e-46 |
| MsG0080048404.01 | MsG0180000139.01 | 0.808442 | 3.091543e-50 | 1.767920e-47 |
| MsG0080048404.01 | MsG0180000145.01 | 0.818898 | 1.541630e-52 | 1.168783e-49 |
| MsG0080048404.01 | MsG0180000209.01 | 0.822856 | 1.893498e-53 | 1.603838e-50 |
| MsG0080048404.01 | MsG0180000335.01 | 0.810747 | 9.885214e-51 | 6.008143e-48 |
| MsG0080048404.01 | MsG0180000470.01 | 0.861893 | 7.447955e-64 | 2.139782e-60 |
| MsG0080048404.01 | MsG0180000703.01 | 0.800501 | 1.399522e-48 | 6.526847e-46 |
| MsG0080048404.01 | MsG0180000828.01 | 0.804042 | 2.611529e-49 | 1.332914e-46 |
| MsG0080048404.01 | MsG0180000835.01 | 0.808692 | 2.733124e-50 | 1.573071e-47 |
| MsG0080048404.01 | MsG0180000914.01 | 0.835141 | 1.994363e-56 | 2.417035e-53 |
| MsG0080048404.01 | MsG0180001063.01 | 0.803876 | 2.827597e-49 | 1.437100e-46 |
| MsG0080048404.01 | MsG0180001285.01 | 0.812851 | 3.443106e-51 | 2.213008e-48 |
| MsG0080048404.01 | MsG0180001886.01 | 0.809867 | 1.530048e-50 | 9.086079e-48 |
| MsG0080048404.01 | MsG0180001892.01 | 0.800190 | 1.619022e-48 | 7.491158e-46 |
| MsG0080048404.01 | MsG0180002377.01 | 0.836885 | 7.198010e-57 | 9.194293e-54 |
| MsG0080048404.01 | MsG0180002547.01 | 0.832201 | 1.081855e-55 | 1.200709e-52 |
| MsG0080048404.01 | MsG0180002664.01 | 0.818368 | 2.032908e-52 | 1.518893e-49 |
| MsG0080048404.01 | MsG0180002794.01 | 0.846526 | 2.055627e-59 | 3.548414e-56 |
| MsG0080048404.01 | MsG0180002973.01 | 0.819367 | 1.205227e-52 | 9.255556e-50 |
| MsG0080048404.01 | MsG0180003686.01 | 0.803347 | 3.640418e-49 | 1.825048e-46 |
| MsG0080048404.01 | MsG0180003773.01 | 0.807136 | 5.858377e-50 | 3.237348e-47 |
| MsG0080048404.01 | MsG0180003797.01 | 0.831391 | 1.713864e-55 | 1.857298e-52 |
| MsG0080048404.01 | MsG0180003885.01 | 0.811522 | 6.711944e-51 | 4.164063e-48 |
| MsG0080048404.01 | MsG0180003951.01 | 0.800331 | 1.515544e-48 | 7.037797e-46 |
| MsG0080048404.01 | MsG0180004152.01 | 0.806455 | 8.156934e-50 | 4.429422e-47 |
| MsG0080048404.01 | MsG0180004295.01 | 0.814357 | 1.605415e-51 | 1.074838e-48 |
| MsG0080048404.01 | MsG0180004331.01 | 0.804905 | 1.725824e-49 | 9.007118e-47 |
| MsG0080048404.01 | MsG0180004389.01 | 0.844734 | 6.291089e-59 | 1.025231e-55 |
| MsG0080048404.01 | MsG0180004463.01 | 0.802911 | 4.480210e-49 | 2.221299e-46 |
| MsG0080048404.01 | MsG0180004465.01 | 0.826020 | 3.411248e-54 | 3.161335e-51 |
| MsG0080048404.01 | MsG0180004481.01 | 0.811364 | 7.266334e-51 | 4.488899e-48 |
| MsG0080048404.01 | MsG0180004482.01 | 0.809586 | 1.758236e-50 | 1.036446e-47 |
| MsG0080048404.01 | MsG0180004500.01 | 0.835626 | 1.503768e-56 | 1.849190e-53 |
| MsG0080048404.01 | MsG0180004509.01 | 0.804546 | 2.050877e-49 | 1.060356e-46 |
| MsG0080048404.01 | MsG0180004765.01 | 0.849287 | 3.563243e-60 | 6.722550e-57 |
| MsG0080048404.01 | MsG0180004779.01 | 0.838676 | 2.495686e-57 | 3.367149e-54 |
| MsG0080048404.01 | MsG0180004975.01 | 0.812290 | 4.566387e-51 | 2.891980e-48 |
| MsG0080048404.01 | MsG0180005153.01 | 0.817970 | 2.501806e-52 | 1.848620e-49 |
| MsG0080048404.01 | MsG0180005169.01 | 0.814551 | 1.454254e-51 | 9.788017e-49 |
| MsG0080048404.01 | MsG0180005250.01 | 0.826767 | 2.264264e-54 | 2.143458e-51 |
| MsG0080048404.01 | MsG0180005445.01 | 0.813131 | 2.990151e-51 | 1.936297e-48 |
| MsG0080048404.01 | MsG0180005575.01 | 0.810743 | 9.905513e-51 | 6.019792e-48 |
| MsG0080048404.01 | MsG0180005993.01 | 0.812859 | 3.430148e-51 | 2.205098e-48 |
| MsG0080048404.01 | MsG0180006017.01 | 0.823342 | 1.458497e-53 | 1.252330e-50 |
| MsG0080048404.01 | MsG0180006096.01 | 0.818734 | 1.679319e-52 | 1.267328e-49 |
| MsG0080048404.01 | MsG0180006224.01 | 0.817045 | 4.042058e-52 | 2.912221e-49 |
| MsG0080048404.01 | MsG0180006261.01 | 0.808272 | 3.360741e-50 | 1.913319e-47 |
| MsG0080048404.01 | MsG0280006299.01 | 0.843749 | 1.156887e-58 | 1.827811e-55 |
| MsG0080048404.01 | MsG0280006309.01 | 0.814260 | 1.686415e-51 | 1.126131e-48 |
| MsG0080048404.01 | MsG0280006324.01 | 0.814132 | 1.799832e-51 | 1.197705e-48 |
| MsG0080048404.01 | MsG0280006405.01 | 0.820425 | 6.906304e-53 | 5.462945e-50 |
| MsG0080048404.01 | MsG0280006461.01 | 0.803469 | 3.434296e-49 | 1.727182e-46 |
| MsG0080048404.01 | MsG0280006491.01 | 0.841896 | 3.597940e-58 | 5.362519e-55 |
| MsG0080048404.01 | MsG0280006512.01 | 0.807683 | 4.483105e-50 | 2.512975e-47 |
| MsG0080048404.01 | MsG0280006567.01 | 0.803344 | 3.646512e-49 | 1.827960e-46 |
| MsG0080048404.01 | MsG0280006593.01 | 0.807191 | 5.702191e-50 | 3.155682e-47 |
| MsG0080048404.01 | MsG0280006601.01 | 0.807327 | 5.335392e-50 | 2.963265e-47 |
| MsG0080048404.01 | MsG0280006678.01 | 0.811746 | 5.999307e-51 | 3.743922e-48 |
| MsG0080048404.01 | MsG0280006930.01 | 0.825039 | 5.825686e-54 | 5.250338e-51 |
| MsG0080048404.01 | MsG0280006937.01 | 0.800515 | 1.389856e-48 | 6.484274e-46 |
| MsG0080048404.01 | MsG0280007064.01 | 0.810387 | 1.182093e-50 | 7.115549e-48 |
| MsG0080048404.01 | MsG0280007066.01 | 0.804173 | 2.452508e-49 | 1.255940e-46 |
| MsG0080048404.01 | MsG0280007118.01 | 0.802449 | 5.580516e-49 | 2.734380e-46 |
| MsG0080048404.01 | MsG0280007307.01 | 0.806214 | 9.171857e-50 | 4.950070e-47 |
| MsG0080048404.01 | MsG0280007452.01 | 0.800161 | 1.640985e-48 | 7.587066e-46 |
| MsG0080048404.01 | MsG0280007506.01 | 0.806137 | 9.519717e-50 | 5.127580e-47 |
| MsG0080048404.01 | MsG0280007527.01 | 0.837404 | 5.302640e-57 | 6.880331e-54 |
| MsG0080048404.01 | MsG0280007529.01 | 0.847311 | 1.253388e-59 | 2.218446e-56 |
| MsG0080048404.01 | MsG0280007547.01 | 0.842619 | 2.315382e-58 | 3.530376e-55 |
| MsG0080048404.01 | MsG0280007727.01 | 0.812078 | 5.081080e-51 | 3.199317e-48 |
| MsG0080048404.01 | MsG0280007955.01 | 0.843969 | 1.010293e-58 | 1.607273e-55 |
| MsG0080048404.01 | MsG0280008076.01 | 0.811535 | 6.668845e-51 | 4.138768e-48 |
| MsG0080048404.01 | MsG0280008112.01 | 0.836085 | 1.150204e-56 | 1.434274e-53 |
| MsG0080048404.01 | MsG0280008363.01 | 0.800483 | 1.411016e-48 | 6.577465e-46 |
| MsG0080048404.01 | MsG0280008377.01 | 0.804399 | 2.201456e-49 | 1.133893e-46 |
| MsG0080048404.01 | MsG0280008378.01 | 0.805320 | 1.413323e-49 | 7.454517e-47 |
| MsG0080048404.01 | MsG0280008457.01 | 0.807953 | 3.929082e-50 | 2.217988e-47 |
| MsG0080048404.01 | MsG0280008615.01 | 0.818130 | 2.301675e-52 | 1.708297e-49 |
| MsG0080048404.01 | MsG0280008765.01 | 0.812879 | 3.395460e-51 | 2.184038e-48 |
| MsG0080048404.01 | MsG0280009383.01 | 0.802706 | 4.939593e-49 | 2.436273e-46 |
| MsG0080048404.01 | MsG0280009421.01 | 0.820734 | 5.866274e-53 | 4.679733e-50 |
| MsG0080048404.01 | MsG0280010184.01 | 0.820811 | 5.631177e-53 | 4.502104e-50 |
| MsG0080048404.01 | MsG0280010233.01 | 0.801910 | 7.204137e-49 | 3.481843e-46 |
| MsG0080048404.01 | MsG0280010349.01 | 0.802638 | 5.102805e-49 | 2.512304e-46 |
| MsG0080048404.01 | MsG0280010366.01 | 0.824999 | 5.954173e-54 | 5.359989e-51 |
| MsG0080048404.01 | MsG0280010443.01 | 0.812614 | 3.879505e-51 | 2.478172e-48 |
| MsG0080048404.01 | MsG0280010517.01 | 0.815554 | 8.711588e-52 | 6.025350e-49 |
| MsG0080048404.01 | MsG0280010698.01 | 0.818273 | 2.136324e-52 | 1.591748e-49 |
| MsG0080048404.01 | MsG0280010722.01 | 0.856511 | 3.061521e-62 | 7.326014e-59 |
| MsG0080048404.01 | MsG0280010778.01 | 0.840890 | 6.619313e-58 | 9.562385e-55 |
| MsG0080048404.01 | MsG0280010807.01 | 0.800904 | 1.157982e-48 | 5.456300e-46 |
| MsG0080048404.01 | MsG0280010900.01 | 0.804730 | 1.877445e-49 | 9.754040e-47 |
| MsG0080048404.01 | MsG0280011052.01 | 0.801809 | 7.557605e-49 | 3.643281e-46 |
| MsG0080048404.01 | MsG0280011101.01 | 0.827783 | 1.292711e-54 | 1.260491e-51 |
| MsG0080048404.01 | MsG0280011109.01 | 0.826306 | 2.916808e-54 | 2.725114e-51 |
| MsG0080048404.01 | MsG0280011339.01 | 0.830506 | 2.825741e-55 | 2.982927e-52 |
| MsG0080048404.01 | MsG0280011341.01 | 0.802540 | 5.345398e-49 | 2.625259e-46 |
| MsG0080048404.01 | MsG0380011581.01 | 0.814170 | 1.765999e-51 | 1.176355e-48 |
| MsG0080048404.01 | MsG0380011609.01 | 0.829454 | 5.101569e-55 | 5.223661e-52 |
| MsG0080048404.01 | MsG0380012122.01 | 0.809054 | 2.287186e-50 | 1.329159e-47 |
| MsG0080048404.01 | MsG0380012460.01 | 0.834274 | 3.294465e-56 | 3.890623e-53 |
| MsG0080048404.01 | MsG0380013085.01 | 0.827721 | 1.337617e-54 | 1.302014e-51 |
| MsG0080048404.01 | MsG0380013176.01 | 0.827488 | 1.521658e-54 | 1.471174e-51 |
| MsG0080048404.01 | MsG0380013183.01 | 0.845653 | 3.552209e-59 | 5.961439e-56 |
| MsG0080048404.01 | MsG0380013475.01 | 0.827776 | 1.297942e-54 | 1.265350e-51 |
| MsG0080048404.01 | MsG0380013549.01 | 0.800606 | 1.331927e-48 | 6.228294e-46 |
| MsG0080048404.01 | MsG0380014097.01 | 0.816775 | 4.647622e-52 | 3.323727e-49 |
| MsG0080048404.01 | MsG0380014139.01 | 0.818680 | 1.727672e-52 | 1.301836e-49 |
| MsG0080048404.01 | MsG0380014173.01 | 0.834517 | 2.863519e-56 | 3.406459e-53 |
| MsG0080048404.01 | MsG0380014495.01 | 0.802359 | 5.824579e-49 | 2.847564e-46 |
| MsG0080048404.01 | MsG0380014537.01 | 0.857109 | 2.041345e-62 | 4.982685e-59 |
| MsG0080048404.01 | MsG0380014701.01 | 0.815748 | 7.886921e-52 | 5.484371e-49 |
| MsG0080048404.01 | MsG0380014876.01 | 0.833482 | 5.200302e-56 | 5.996520e-53 |
| MsG0080048404.01 | MsG0380014948.01 | 0.854853 | 9.335191e-62 | 2.113784e-58 |
| MsG0080048404.01 | MsG0380015332.01 | 0.819170 | 1.336924e-52 | 1.021129e-49 |
| MsG0080048404.01 | MsG0380015440.01 | 0.826602 | 2.479559e-54 | 2.336049e-51 |
| MsG0080048404.01 | MsG0380015555.01 | 0.846136 | 2.625183e-59 | 4.474005e-56 |
| MsG0080048404.01 | MsG0380015566.01 | 0.814804 | 1.278137e-51 | 8.661402e-49 |
| MsG0080048404.01 | MsG0380015631.01 | 0.817330 | 3.488157e-52 | 2.532693e-49 |
| MsG0080048404.01 | MsG0380015716.01 | 0.800909 | 1.155075e-48 | 5.443309e-46 |
| MsG0080048404.01 | MsG0380015720.01 | 0.821252 | 4.457914e-53 | 3.607859e-50 |
| MsG0080048404.01 | MsG0380015930.01 | 0.804677 | 1.925795e-49 | 9.990874e-47 |
| MsG0080048404.01 | MsG0380016285.01 | 0.813301 | 2.743796e-51 | 1.785088e-48 |
| MsG0080048404.01 | MsG0380016407.01 | 0.846238 | 2.462539e-59 | 4.210877e-56 |
| MsG0080048404.01 | MsG0380016529.01 | 0.847446 | 1.150746e-59 | 2.045904e-56 |
| MsG0080048404.01 | MsG0380016671.01 | 0.812438 | 4.239740e-51 | 2.695895e-48 |
| MsG0080048404.01 | MsG0380016910.01 | 0.843813 | 1.111980e-58 | 1.760360e-55 |
| MsG0080048404.01 | MsG0380016970.01 | 0.812972 | 3.239483e-51 | 2.088809e-48 |
| MsG0080048404.01 | MsG0380017202.01 | 0.818291 | 2.116778e-52 | 1.578000e-49 |
| MsG0080048404.01 | MsG0380017461.01 | 0.825996 | 3.456656e-54 | 3.201273e-51 |
| MsG0080048404.01 | MsG0380017498.01 | 0.801460 | 8.910072e-49 | 4.257494e-46 |
| MsG0080048404.01 | MsG0380017589.01 | 0.815027 | 1.140556e-51 | 7.775880e-49 |
| MsG0080048404.01 | MsG0480018183.01 | 0.811838 | 5.730586e-51 | 3.584833e-48 |
| MsG0080048404.01 | MsG0480018465.01 | 0.838625 | 2.573936e-57 | 3.467377e-54 |
| MsG0080048404.01 | MsG0480018778.01 | 0.803880 | 2.822491e-49 | 1.434620e-46 |
| MsG0080048404.01 | MsG0480018779.01 | 0.822399 | 2.418812e-53 | 2.022448e-50 |
| MsG0080048404.01 | MsG0480018911.01 | 0.804365 | 2.237560e-49 | 1.151525e-46 |
| MsG0080048404.01 | MsG0480018985.01 | 0.800360 | 1.495100e-48 | 6.948002e-46 |
| MsG0080048404.01 | MsG0480019206.01 | 0.811397 | 7.145209e-51 | 4.418259e-48 |
| MsG0080048404.01 | MsG0480019795.01 | 0.809041 | 2.301631e-50 | 1.337087e-47 |
| MsG0080048404.01 | MsG0480020024.01 | 0.803352 | 3.631645e-49 | 1.820884e-46 |
| MsG0080048404.01 | MsG0480020025.01 | 0.818100 | 2.337540e-52 | 1.733419e-49 |
| MsG0080048404.01 | MsG0480020136.01 | 0.808360 | 3.218204e-50 | 1.836433e-47 |
| MsG0080048404.01 | MsG0480020283.01 | 0.806309 | 8.755750e-50 | 4.736796e-47 |
| MsG0080048404.01 | MsG0480020447.01 | 0.823057 | 1.699609e-53 | 1.447863e-50 |
| MsG0080048404.01 | MsG0480020739.01 | 0.833410 | 5.417979e-56 | 6.234540e-53 |
| MsG0080048404.01 | MsG0480020887.01 | 0.817189 | 3.752581e-52 | 2.714115e-49 |
| MsG0080048404.01 | MsG0480020935.01 | -0.819215 | 1.305523e-52 | 9.984177e-50 |
| MsG0080048404.01 | MsG0480021056.01 | 0.814379 | 1.587665e-51 | 1.063642e-48 |
| MsG0080048404.01 | MsG0480021215.01 | 0.848465 | 6.022867e-60 | 1.106394e-56 |
| MsG0080048404.01 | MsG0480021452.01 | 0.803072 | 4.151283e-49 | 2.066474e-46 |
| MsG0080048404.01 | MsG0480021501.01 | 0.822147 | 2.767872e-53 | 2.297486e-50 |
| MsG0080048404.01 | MsG0480021534.01 | 0.812049 | 5.155502e-51 | 3.243459e-48 |
| MsG0080048404.01 | MsG0480021536.01 | 0.841498 | 4.583025e-58 | 6.746901e-55 |
| MsG0080048404.01 | MsG0480021558.01 | 0.814289 | 1.661945e-51 | 1.110673e-48 |
| MsG0080048404.01 | MsG0480021750.01 | 0.801210 | 1.002648e-48 | 4.760849e-46 |
| MsG0080048404.01 | MsG0480021863.01 | 0.814749 | 1.314571e-51 | 8.894941e-49 |
| MsG0080048404.01 | MsG0480021869.01 | 0.807347 | 5.283825e-50 | 2.936043e-47 |
| MsG0080048404.01 | MsG0480021870.01 | 0.852263 | 5.176929e-61 | 1.075781e-57 |
| MsG0080048404.01 | MsG0480022068.01 | 0.806503 | 7.969878e-50 | 4.332999e-47 |
| MsG0080048404.01 | MsG0480022222.01 | 0.813223 | 2.853791e-51 | 1.852643e-48 |
| MsG0080048404.01 | MsG0480022514.01 | 0.813631 | 2.321710e-51 | 1.524117e-48 |
| MsG0080048404.01 | MsG0480022711.01 | 0.831994 | 1.217569e-55 | 1.343282e-52 |
| MsG0080048404.01 | MsG0480022795.01 | 0.807610 | 4.646239e-50 | 2.599394e-47 |
| MsG0080048404.01 | MsG0480022985.01 | 0.820372 | 7.101297e-53 | 5.608872e-50 |
| MsG0080048404.01 | MsG0480022986.01 | 0.805489 | 1.302635e-49 | 6.900624e-47 |
| MsG0080048404.01 | MsG0480023055.01 | 0.807871 | 4.090834e-50 | 2.304281e-47 |
| MsG0080048404.01 | MsG0480023163.01 | 0.817303 | 3.536867e-52 | 2.566147e-49 |
| MsG0080048404.01 | MsG0480023221.01 | 0.823103 | 1.658291e-53 | 1.414483e-50 |
| MsG0080048404.01 | MsG0480023354.01 | 0.826490 | 2.636955e-54 | 2.476474e-51 |
| MsG0080048404.01 | MsG0480023357.01 | 0.810364 | 1.195941e-50 | 7.194838e-48 |
| MsG0080048404.01 | MsG0480023463.01 | 0.825065 | 5.742490e-54 | 5.178991e-51 |
| MsG0080048404.01 | MsG0480023488.01 | 0.813320 | 2.717706e-51 | 1.769062e-48 |
| MsG0080048404.01 | MsG0480023489.01 | 0.820397 | 7.008122e-53 | 5.539243e-50 |
| MsG0080048404.01 | MsG0480023503.01 | 0.823477 | 1.356294e-53 | 1.169086e-50 |
| MsG0080048404.01 | MsG0480023600.01 | 0.814841 | 1.254532e-51 | 8.509617e-49 |
| MsG0080048404.01 | MsG0480023636.01 | 0.823446 | 1.379482e-53 | 1.187990e-50 |
| MsG0080048404.01 | MsG0480023814.01 | 0.800390 | 1.473985e-48 | 6.855020e-46 |
| MsG0080048404.01 | MsG0480023867.01 | 0.803041 | 4.212749e-49 | 2.095468e-46 |
| MsG0080048404.01 | MsG0480023943.01 | 0.806405 | 8.357273e-50 | 4.532226e-47 |
| MsG0080048404.01 | MsG0580024197.01 | 0.866845 | 2.116139e-65 | 7.236503e-62 |
| MsG0080048404.01 | MsG0580024495.01 | 0.802299 | 5.991633e-49 | 2.924768e-46 |
| MsG0080048404.01 | MsG0580024690.01 | 0.812273 | 4.605774e-51 | 2.915621e-48 |
| MsG0080048404.01 | MsG0580024781.01 | 0.819559 | 1.089965e-52 | 8.416014e-50 |
| MsG0080048404.01 | MsG0580024790.01 | -0.830604 | 2.674075e-55 | 2.831092e-52 |
| MsG0080048404.01 | MsG0580025022.01 | 0.810960 | 8.889018e-51 | 5.433902e-48 |
| MsG0080048404.01 | MsG0580025135.01 | 0.828931 | 6.832723e-55 | 6.889112e-52 |
| MsG0080048404.01 | MsG0580025357.01 | -0.803638 | 3.168394e-49 | 1.600400e-46 |
| MsG0080048404.01 | MsG0580025439.01 | 0.811069 | 8.416412e-51 | 5.159470e-48 |
| MsG0080048404.01 | MsG0580025587.01 | 0.815913 | 7.246884e-52 | 5.061520e-49 |
| MsG0080048404.01 | MsG0580025816.01 | 0.820757 | 5.793198e-53 | 4.624654e-50 |
| MsG0080048404.01 | MsG0580026086.01 | 0.836674 | 8.149746e-57 | 1.034313e-53 |
| MsG0080048404.01 | MsG0580026726.01 | 0.811788 | 5.875442e-51 | 3.670670e-48 |
| MsG0080048404.01 | MsG0580027031.01 | 0.802347 | 5.857202e-49 | 2.862605e-46 |
| MsG0080048404.01 | MsG0580027361.01 | 0.827169 | 1.815248e-54 | 1.738726e-51 |
| MsG0080048404.01 | MsG0580027650.01 | 0.827497 | 1.514226e-54 | 1.464353e-51 |
| MsG0080048404.01 | MsG0580027922.01 | 0.821786 | 3.354263e-53 | 2.755893e-50 |
| MsG0080048404.01 | MsG0580027947.01 | 0.835421 | 1.694532e-56 | 2.071149e-53 |
| MsG0080048404.01 | MsG0580027999.01 | 0.821589 | 3.725615e-53 | 3.043722e-50 |
| MsG0080048404.01 | MsG0580028148.01 | 0.804954 | 1.685501e-49 | 8.807497e-47 |
| MsG0080048404.01 | MsG0580028634.01 | 0.809460 | 1.871618e-50 | 1.099512e-47 |
| MsG0080048404.01 | MsG0580029008.01 | 0.821484 | 3.940896e-53 | 3.210234e-50 |
| MsG0080048404.01 | MsG0580029236.01 | 0.850654 | 1.476566e-60 | 2.912854e-57 |
| MsG0080048404.01 | MsG0580029376.01 | 0.808308 | 3.301026e-50 | 1.881041e-47 |
| MsG0080048404.01 | MsG0580029549.01 | 0.813148 | 2.963509e-51 | 1.919967e-48 |
| MsG0080048404.01 | MsG0580029736.01 | 0.802768 | 4.795291e-49 | 2.368913e-46 |
| MsG0080048404.01 | MsG0580029925.01 | 0.802218 | 6.225951e-49 | 3.032702e-46 |
| MsG0080048404.01 | MsG0580030142.01 | 0.809336 | 1.990106e-50 | 1.165285e-47 |
| MsG0080048404.01 | MsG0680030413.01 | 0.832839 | 7.519370e-56 | 8.505190e-53 |
| MsG0080048404.01 | MsG0680030880.01 | 0.825373 | 4.855529e-54 | 4.417427e-51 |
| MsG0080048404.01 | MsG0680030881.01 | 0.826114 | 3.239563e-54 | 3.010209e-51 |
| MsG0080048404.01 | MsG0680030882.01 | 0.840294 | 9.483438e-58 | 1.344782e-54 |
| MsG0080048404.01 | MsG0680031214.01 | 0.822198 | 2.692901e-53 | 2.238492e-50 |
| MsG0080048404.01 | MsG0680031488.01 | 0.824378 | 8.340205e-54 | 7.374358e-51 |
| MsG0080048404.01 | MsG0680031506.01 | 0.832311 | 1.016372e-55 | 1.131569e-52 |
| MsG0080048404.01 | MsG0680031561.01 | 0.801444 | 8.978104e-49 | 4.288260e-46 |
| MsG0080048404.01 | MsG0680031617.01 | 0.815638 | 8.344801e-52 | 5.785271e-49 |
| MsG0080048404.01 | MsG0680032112.01 | 0.801773 | 7.687750e-49 | 3.702489e-46 |
| MsG0080048404.01 | MsG0680032157.01 | 0.803725 | 3.038956e-49 | 1.538454e-46 |
| MsG0080048404.01 | MsG0680032460.01 | -0.802957 | 4.384612e-49 | 2.176328e-46 |
| MsG0080048404.01 | MsG0680033928.01 | 0.812598 | 3.912343e-51 | 2.497991e-48 |
| MsG0080048404.01 | MsG0680034230.01 | 0.837382 | 5.371819e-57 | 6.965253e-54 |
| MsG0080048404.01 | MsG0680034320.01 | 0.809685 | 1.674925e-50 | 9.898904e-48 |
| MsG0080048404.01 | MsG0680034913.01 | 0.801334 | 9.455936e-49 | 4.503984e-46 |
| MsG0080048404.01 | MsG0680035034.01 | 0.805678 | 1.188577e-49 | 6.327307e-47 |
| MsG0080048404.01 | MsG0680035580.01 | 0.800722 | 1.261277e-48 | 5.915180e-46 |
| MsG0080048404.01 | MsG0680035877.01 | 0.817323 | 3.499559e-52 | 2.540508e-49 |
| MsG0080048404.01 | MsG0780036183.01 | 0.840661 | 7.601494e-58 | 1.090249e-54 |
| MsG0080048404.01 | MsG0780036190.01 | 0.830532 | 2.784656e-55 | 2.941807e-52 |
| MsG0080048404.01 | MsG0780036340.01 | 0.800753 | 1.243285e-48 | 5.835322e-46 |
| MsG0080048404.01 | MsG0780036477.01 | 0.813068 | 3.086491e-51 | 1.995349e-48 |
| MsG0080048404.01 | MsG0780036602.01 | 0.819326 | 1.231778e-52 | 9.448762e-50 |
| MsG0080048404.01 | MsG0780036659.01 | 0.827983 | 1.157142e-54 | 1.135078e-51 |
| MsG0080048404.01 | MsG0780037054.01 | 0.811836 | 5.736015e-51 | 3.588107e-48 |
| MsG0080048404.01 | MsG0780037141.01 | 0.814582 | 1.431571e-51 | 9.643294e-49 |
| MsG0080048404.01 | MsG0780037292.01 | 0.822226 | 2.653374e-53 | 2.207436e-50 |
| MsG0080048404.01 | MsG0780038401.01 | 0.821127 | 4.762912e-53 | 3.841624e-50 |
| MsG0080048404.01 | MsG0780038439.01 | 0.840556 | 8.100707e-58 | 1.158113e-54 |
| MsG0080048404.01 | MsG0780038488.01 | 0.804649 | 1.952171e-49 | 1.012042e-46 |
| MsG0080048404.01 | MsG0780039170.01 | 0.805525 | 1.280129e-49 | 6.787436e-47 |
| MsG0080048404.01 | MsG0780039243.01 | 0.809603 | 1.744054e-50 | 1.028536e-47 |
| MsG0080048404.01 | MsG0780039443.01 | 0.850024 | 2.218290e-60 | 4.287010e-57 |
| MsG0080048404.01 | MsG0780039522.01 | 0.819929 | 8.971245e-53 | 6.999135e-50 |
| MsG0080048404.01 | MsG0780039830.01 | -0.801633 | 8.212162e-49 | 3.941098e-46 |
| MsG0080048404.01 | MsG0780039867.01 | -0.808080 | 3.691625e-50 | 2.090974e-47 |
| MsG0080048404.01 | MsG0780040057.01 | 0.840864 | 6.725906e-58 | 9.708181e-55 |
| MsG0080048404.01 | MsG0780040262.01 | 0.810083 | 1.375070e-50 | 8.211659e-48 |
| MsG0080048404.01 | MsG0780040579.01 | -0.802850 | 4.613694e-49 | 2.283928e-46 |
| MsG0080048404.01 | MsG0780040734.01 | 0.818471 | 1.926723e-52 | 1.443635e-49 |
| MsG0080048404.01 | MsG0780040841.01 | 0.800113 | 1.677932e-48 | 7.748667e-46 |
| MsG0080048404.01 | MsG0780041187.01 | 0.808695 | 2.729739e-50 | 1.571217e-47 |
| MsG0080048404.01 | MsG0780041387.01 | 0.806733 | 7.128733e-50 | 3.898577e-47 |
| MsG0080048404.01 | MsG0780041391.01 | 0.821293 | 4.360601e-53 | 3.533262e-50 |
| MsG0080048404.01 | MsG0780041416.01 | 0.821002 | 5.088515e-53 | 4.090381e-50 |
| MsG0080048404.01 | MsG0780041435.01 | 0.829981 | 3.797352e-55 | 3.948329e-52 |
| MsG0080048404.01 | MsG0780041440.01 | 0.817110 | 3.907686e-52 | 2.820263e-49 |
| MsG0080048404.01 | MsG0780041456.01 | 0.806942 | 6.439049e-50 | 3.540457e-47 |
| MsG0080048404.01 | MsG0780041699.01 | 0.805334 | 1.403877e-49 | 7.407272e-47 |
| MsG0080048404.01 | MsG0880042276.01 | 0.806951 | 6.408290e-50 | 3.524394e-47 |
| MsG0080048404.01 | MsG0880042324.01 | 0.828989 | 6.616232e-55 | 6.681992e-52 |
| MsG0080048404.01 | MsG0880042520.01 | 0.824171 | 9.326550e-54 | 8.198474e-51 |
| MsG0080048404.01 | MsG0880042656.01 | 0.817633 | 2.980886e-52 | 2.182392e-49 |
| MsG0080048404.01 | MsG0880042700.01 | 0.820324 | 7.286202e-53 | 5.746731e-50 |
| MsG0080048404.01 | MsG0880042966.01 | 0.812356 | 4.418262e-51 | 2.803136e-48 |
| MsG0080048404.01 | MsG0880043454.01 | 0.800304 | 1.534459e-48 | 7.120903e-46 |
| MsG0080048404.01 | MsG0880043479.01 | 0.844461 | 7.451432e-59 | 1.203818e-55 |
| MsG0080048404.01 | MsG0880044067.01 | 0.804302 | 2.305747e-49 | 1.184712e-46 |
| MsG0080048404.01 | MsG0880044565.01 | 0.818071 | 2.372774e-52 | 1.758178e-49 |
| MsG0080048404.01 | MsG0880044728.01 | 0.814740 | 1.320719e-51 | 8.934306e-49 |
| MsG0080048404.01 | MsG0880045111.01 | 0.832488 | 9.184666e-56 | 1.028127e-52 |
| MsG0080048404.01 | MsG0880045294.01 | 0.817206 | 3.718266e-52 | 2.690661e-49 |
| MsG0080048404.01 | MsG0880045362.01 | 0.836072 | 1.159287e-56 | 1.444999e-53 |
| MsG0080048404.01 | MsG0880045371.01 | 0.835237 | 1.886555e-56 | 2.293229e-53 |
| MsG0080048404.01 | MsG0880045372.01 | 0.820279 | 7.458672e-53 | 5.875739e-50 |
| MsG0080048404.01 | MsG0880045736.01 | 0.822087 | 2.858091e-53 | 2.368229e-50 |
| MsG0080048404.01 | MsG0880045765.01 | 0.855296 | 6.936966e-62 | 1.594128e-58 |
| MsG0080048404.01 | MsG0880045937.01 | 0.812382 | 4.359585e-51 | 2.767798e-48 |
| MsG0080048404.01 | MsG0880046457.01 | 0.812571 | 3.964827e-51 | 2.529767e-48 |
| MsG0080048404.01 | MsG0880046572.01 | 0.805663 | 1.197203e-49 | 6.370699e-47 |
| MsG0080048404.01 | MsG0880046620.01 | 0.838052 | 3.615148e-57 | 4.785597e-54 |
| MsG0080048404.01 | MsG0880046724.01 | 0.808873 | 2.501006e-50 | 1.446358e-47 |
| MsG0080048404.01 | MsG0880046790.01 | 0.807908 | 4.017318e-50 | 2.264967e-47 |
| MsG0080048404.01 | MsG0880047135.01 | 0.806761 | 7.030188e-50 | 3.847439e-47 |
| MsG0080048404.01 | MsG0880047473.01 | 0.858818 | 6.342518e-63 | 1.639818e-59 |
| MsG0080048404.01 | MsG0880047764.01 | 0.828668 | 7.910588e-55 | 7.915379e-52 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048404.01.T01 | MTR_3g435250 | 91.566 | 83 | 7 | 0 | 40 | 122 | 115 | 197 | 1.40e-49 | 156 |
| MsG0080048404.01.T01 | MTR_3g435230 | 79.518 | 83 | 17 | 0 | 40 | 122 | 115 | 197 | 1.43e-41 | 136 |
| MsG0080048404.01.T01 | MTR_3g435200 | 68.675 | 83 | 26 | 0 | 40 | 122 | 113 | 195 | 1.97e-36 | 123 |
| MsG0080048404.01.T01 | MTR_3g435170 | 77.465 | 71 | 16 | 0 | 40 | 110 | 115 | 185 | 1.29e-34 | 118 |
| MsG0080048404.01.T01 | MTR_5g041930 | 55.422 | 83 | 37 | 0 | 40 | 122 | 120 | 202 | 5.15e-30 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048404.01.T01 | AT1G18720 | 60.000 | 90 | 36 | 0 | 31 | 120 | 113 | 202 | 4.70e-33 | 115 |
| MsG0080048404.01.T01 | AT1G18720 | 60.000 | 90 | 36 | 0 | 31 | 120 | 113 | 202 | 4.70e-33 | 115 |
| MsG0080048404.01.T01 | AT1G74440 | 58.974 | 78 | 32 | 0 | 38 | 115 | 120 | 197 | 4.77e-28 | 102 |
| MsG0080048404.01.T01 | AT1G74440 | 58.974 | 78 | 32 | 0 | 38 | 115 | 120 | 197 | 4.77e-28 | 102 |
Find 46 sgRNAs with CRISPR-Local
Find 81 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCCTTCAATTCTTTGATAT+TGG | 0.256590 | contig304end:-4750 | None:intergenic |
| TGTCTTTATTGAGGGGAAAT+TGG | 0.315216 | contig304end:+4941 | MsG0080048404.01.T01:intron |
| TTGAAATAGATAATCTTTGC+TGG | 0.350738 | contig304end:+5222 | MsG0080048404.01.T01:three_prime_UTR |
| GCTGTTATAAACCATTCCTT+TGG | 0.358951 | contig304end:+4816 | MsG0080048404.01.T01:three_prime_UTR |
| TTTGTCTGAAATCCAGGATA+TGG | 0.368016 | contig304end:-4707 | None:intergenic |
| TAGCTAGACTCTGCTCCTTT+AGG | 0.375909 | contig304end:+3977 | MsG0080048404.01.T01:CDS |
| GTGTTGGCTGCTCAGTTGAT+TGG | 0.382102 | contig304end:+4393 | MsG0080048404.01.T01:CDS |
| TGTTGTGTTGTCATTTATTG+AGG | 0.416812 | contig304end:+4874 | MsG0080048404.01.T01:three_prime_UTR |
| CTCAGACTCCATCTCGAATA+CGG | 0.422561 | contig304end:+3953 | MsG0080048404.01.T01:CDS |
| AGCCAATATCAAAGAATTGA+AGG | 0.427037 | contig304end:+4748 | MsG0080048404.01.T01:CDS |
| TTCACCTTTGTCTGAAATCC+AGG | 0.431535 | contig304end:-4713 | None:intergenic |
| TATAATCTTTCAGGTTGTGT+TGG | 0.431542 | contig304end:+4377 | MsG0080048404.01.T01:intron |
| GGATGGACTGGAACATCTAT+TGG | 0.439686 | contig304end:+4414 | MsG0080048404.01.T01:CDS |
| GTTCATATCCAATGGATGAT+TGG | 0.446343 | contig304end:-4685 | None:intergenic |
| ATTGGATATGAACCATATCC+TGG | 0.460320 | contig304end:+4695 | MsG0080048404.01.T01:CDS |
| TATTGGTCATGGCGTGTTTG+AGG | 0.463494 | contig304end:+4431 | MsG0080048404.01.T01:CDS |
| TGGCTGCTCAGTTGATTGGA+TGG | 0.484630 | contig304end:+4397 | MsG0080048404.01.T01:CDS |
| ACCTCAAGAATCACGAAGAA+AGG | 0.495722 | contig304end:-4583 | None:intergenic |
| GCTCAGTTGATTGGATGGAC+TGG | 0.499989 | contig304end:+4402 | MsG0080048404.01.T01:CDS |
| CTACATTGACAACGAAATTG+AGG | 0.502607 | contig304end:-5048 | None:intergenic |
| CAACACTGATTCTTCTCAAG+AGG | 0.505881 | contig304end:+5095 | MsG0080048404.01.T01:three_prime_UTR |
| CGATTGGATGACCTTGCTCA+AGG | 0.509060 | contig304end:+4547 | MsG0080048404.01.T01:CDS |
| GAAACGTGTGTCAACTCGAT+TGG | 0.511678 | contig304end:+4531 | MsG0080048404.01.T01:intron |
| GCCTTTCTTCGTGATTCTTG+AGG | 0.516103 | contig304end:+4582 | MsG0080048404.01.T01:CDS |
| TAGGTCCTCCAATCATCCAT+TGG | 0.519762 | contig304end:+4677 | MsG0080048404.01.T01:intron |
| GGAAATTGGAGATAAATTAG+TGG | 0.522367 | contig304end:+4955 | MsG0080048404.01.T01:three_prime_UTR |
| CCTCCTGTCATGACTCCTAA+AGG | 0.532466 | contig304end:-3992 | None:intergenic |
| GTTGCAAGAAATCATTGTAA+AGG | 0.533966 | contig304end:-5076 | None:intergenic |
| TCAGACTCCATCTCGAATAC+GGG | 0.539823 | contig304end:+3954 | MsG0080048404.01.T01:CDS |
| CTCTTCTAGAGATTTACTCT+CGG | 0.555374 | contig304end:+4017 | MsG0080048404.01.T01:CDS |
| AGGATATGGTTCATATCCAA+TGG | 0.559473 | contig304end:-4693 | None:intergenic |
| GTTGTGTTGTCATTTATTGA+GGG | 0.577748 | contig304end:+4875 | MsG0080048404.01.T01:three_prime_UTR |
| CTAGCTACCCGTATTCGAGA+TGG | 0.580045 | contig304end:-3961 | None:intergenic |
| CATATCCAATGGATGATTGG+AGG | 0.588211 | contig304end:-4682 | None:intergenic |
| TTCAGACAAAGGTGAAGGCA+AGG | 0.592728 | contig304end:+4720 | MsG0080048404.01.T01:CDS |
| GAGAGTAAATCTCTAGAAGA+GGG | 0.596002 | contig304end:-4015 | None:intergenic |
| GCTCCTTTAGGAGTCATGAC+AGG | 0.609411 | contig304end:+3989 | MsG0080048404.01.T01:CDS |
| CGAGAGTAAATCTCTAGAAG+AGG | 0.617070 | contig304end:-4016 | None:intergenic |
| ACTGGAACATCTATTGGTCA+TGG | 0.617255 | contig304end:+4420 | MsG0080048404.01.T01:CDS |
| TGGATTTCAGACAAAGGTGA+AGG | 0.621966 | contig304end:+4715 | MsG0080048404.01.T01:CDS |
| CGTATTCGAGATGGAGTCTG+AGG | 0.625280 | contig304end:-3952 | None:intergenic |
| AAGACCTAGTGAAAATGCAA+TGG | 0.638726 | contig304end:+3929 | MsG0080048404.01.T01:CDS |
| TTGTGTTGTCATTTATTGAG+GGG | 0.653890 | contig304end:+4876 | MsG0080048404.01.T01:three_prime_UTR |
| CCTTTAGGAGTCATGACAGG+AGG | 0.670470 | contig304end:+3992 | MsG0080048404.01.T01:CDS |
| TCTTGCTAGAGCAACTACAG+TGG | 0.696223 | contig304end:+5163 | MsG0080048404.01.T01:three_prime_UTR |
| ATATCCTGGATTTCAGACAA+AGG | 0.705635 | contig304end:+4709 | MsG0080048404.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTTTTTATTTCCAA+AGG | - | contig304end:4835-4854 | None:intergenic | 10.0% |
| !! | AATAAAATTCTACAGAAGAT+TGG | + | contig304end:4848-4867 | MsG0080048404.01.T01:three_prime_UTR | 20.0% |
| !!! | GACTATTTTAATTTGTTTGT+AGG | + | contig304end:4658-4677 | MsG0080048404.01.T01:intron | 20.0% |
| !!! | TTTTTTTATTTCCAAAGGAA+TGG | - | contig304end:4830-4849 | None:intergenic | 20.0% |
| ! | ATTTGTGTTGTCTTTATTGA+GGG | + | contig304end:4933-4952 | MsG0080048404.01.T01:intron | 25.0% |
| ! | CAATTGTTGTGCTTTAATTA+TGG | + | contig304end:4352-4371 | MsG0080048404.01.T01:intron | 25.0% |
| ! | TACTTCAAAAATTCACAAGA+TGG | - | contig304end:5193-5212 | None:intergenic | 25.0% |
| ! | TTGAAATAGATAATCTTTGC+TGG | + | contig304end:5222-5241 | MsG0080048404.01.T01:three_prime_UTR | 25.0% |
| ! | TTGCTTTCAAAATGAAAACA+AGG | + | contig304end:4633-4652 | MsG0080048404.01.T01:intron | 25.0% |
| !! | ATTATGGACTATAATCTTTC+AGG | + | contig304end:4368-4387 | MsG0080048404.01.T01:intron | 25.0% |
| !! | TCGTTTTACTCACTTATATA+TGG | - | contig304end:4192-4211 | None:intergenic | 25.0% |
| ACAAAAGATGTTTATGACGA+AGG | + | contig304end:4298-4317 | MsG0080048404.01.T01:intron | 30.0% | |
| AGCCAATATCAAAGAATTGA+AGG | + | contig304end:4748-4767 | MsG0080048404.01.T01:CDS | 30.0% | |
| ATGTTAGGCTACATTCATTA+TGG | + | contig304end:4126-4145 | MsG0080048404.01.T01:intron | 30.0% | |
| GATTTGTGTTGTCTTTATTG+AGG | + | contig304end:4932-4951 | MsG0080048404.01.T01:intron | 30.0% | |
| GGAAATTGGAGATAAATTAG+TGG | + | contig304end:4955-4974 | MsG0080048404.01.T01:three_prime_UTR | 30.0% | |
| GTCCTTCAATTCTTTGATAT+TGG | - | contig304end:4753-4772 | None:intergenic | 30.0% | |
| GTTGCAAGAAATCATTGTAA+AGG | - | contig304end:5079-5098 | None:intergenic | 30.0% | |
| TACTCACTTATATATGGATG+TGG | - | contig304end:4186-4205 | None:intergenic | 30.0% | |
| TGTAACAGCTTAAATTGAGA+CGG | - | contig304end:4085-4104 | None:intergenic | 30.0% | |
| TGTTAGGCTACATTCATTAT+GGG | + | contig304end:4127-4146 | MsG0080048404.01.T01:intron | 30.0% | |
| TTAAATTGAGACGGACAAAT+TGG | - | contig304end:4076-4095 | None:intergenic | 30.0% | |
| TTTGTGTTGTCTTTATTGAG+GGG | + | contig304end:4934-4953 | MsG0080048404.01.T01:intron | 30.0% | |
| ! | GTTGTGTTGTCATTTATTGA+GGG | + | contig304end:4875-4894 | MsG0080048404.01.T01:three_prime_UTR | 30.0% |
| ! | TGTTGTGTTGTCATTTATTG+AGG | + | contig304end:4874-4893 | MsG0080048404.01.T01:three_prime_UTR | 30.0% |
| ! | TTGTGTTGTCATTTATTGAG+GGG | + | contig304end:4876-4895 | MsG0080048404.01.T01:three_prime_UTR | 30.0% |
| !! | TATAATCTTTCAGGTTGTGT+TGG | + | contig304end:4377-4396 | MsG0080048404.01.T01:intron | 30.0% |
| AAGACCTAGTGAAAATGCAA+TGG | + | contig304end:3929-3948 | MsG0080048404.01.T01:CDS | 35.0% | |
| AGGATATGGTTCATATCCAA+TGG | - | contig304end:4696-4715 | None:intergenic | 35.0% | |
| ATATCCTGGATTTCAGACAA+AGG | + | contig304end:4709-4728 | MsG0080048404.01.T01:CDS | 35.0% | |
| ATTGGATATGAACCATATCC+TGG | + | contig304end:4695-4714 | MsG0080048404.01.T01:CDS | 35.0% | |
| CCATTAAAAAACCTTGAGCA+AGG | - | contig304end:4561-4580 | None:intergenic | 35.0% | |
| CTACATTGACAACGAAATTG+AGG | - | contig304end:5051-5070 | None:intergenic | 35.0% | |
| GCTGTTATAAACCATTCCTT+TGG | + | contig304end:4816-4835 | MsG0080048404.01.T01:three_prime_UTR | 35.0% | |
| GTCATTTATTGAGGGGAAAT+TGG | + | contig304end:4883-4902 | MsG0080048404.01.T01:intron | 35.0% | |
| GTTCATATCCAATGGATGAT+TGG | - | contig304end:4688-4707 | None:intergenic | 35.0% | |
| TGTCTTTATTGAGGGGAAAT+TGG | + | contig304end:4941-4960 | MsG0080048404.01.T01:intron | 35.0% | |
| ! | CTCTTCTAGAGATTTACTCT+CGG | + | contig304end:4017-4036 | MsG0080048404.01.T01:CDS | 35.0% |
| ! | GAGAGTAAATCTCTAGAAGA+GGG | - | contig304end:4018-4037 | None:intergenic | 35.0% |
| ! | TTTGTCTGAAATCCAGGATA+TGG | - | contig304end:4710-4729 | None:intergenic | 35.0% |
| !!! | CCTTGCTCAAGGTTTTTTAA+TGG | + | contig304end:4558-4577 | MsG0080048404.01.T01:CDS | 35.0% |
| AAATTGGCAACAAGCTTGAC+AGG | - | contig304end:4060-4079 | None:intergenic | 40.0% | |
| ACCTCAAGAATCACGAAGAA+AGG | - | contig304end:4586-4605 | None:intergenic | 40.0% | |
| ACTGGAACATCTATTGGTCA+TGG | + | contig304end:4420-4439 | MsG0080048404.01.T01:CDS | 40.0% | |
| CATATCCAATGGATGATTGG+AGG | - | contig304end:4685-4704 | None:intergenic | 40.0% | |
| CTACATTCATTATGGGAGAG+GGG | + | contig304end:4134-4153 | MsG0080048404.01.T01:intron | 40.0% | |
| GCTACATTCATTATGGGAGA+GGG | + | contig304end:4133-4152 | MsG0080048404.01.T01:intron | 40.0% | |
| GTTTGTCATAGTGCTTGAAC+TGG | + | contig304end:4610-4629 | MsG0080048404.01.T01:intron | 40.0% | |
| TCATGTGACGATGTGATGTT+AGG | + | contig304end:4111-4130 | MsG0080048404.01.T01:intron | 40.0% | |
| TGGATTTCAGACAAAGGTGA+AGG | + | contig304end:4715-4734 | MsG0080048404.01.T01:CDS | 40.0% | |
| ! | CGAGAGTAAATCTCTAGAAG+AGG | - | contig304end:4019-4038 | None:intergenic | 40.0% |
| ! | TTCACCTTTGTCTGAAATCC+AGG | - | contig304end:4716-4735 | None:intergenic | 40.0% |
| !! | CAACACTGATTCTTCTCAAG+AGG | + | contig304end:5095-5114 | MsG0080048404.01.T01:three_prime_UTR | 40.0% |
| !! | TGCTTTTCAGTGATGGAACA+AGG | - | contig304end:4462-4481 | None:intergenic | 40.0% |
| CTCAGACTCCATCTCGAATA+CGG | + | contig304end:3953-3972 | MsG0080048404.01.T01:CDS | 45.0% | |
| GAAACGTGTGTCAACTCGAT+TGG | + | contig304end:4531-4550 | MsG0080048404.01.T01:intron | 45.0% | |
| GCCTTTCTTCGTGATTCTTG+AGG | + | contig304end:4582-4601 | MsG0080048404.01.T01:CDS | 45.0% | |
| GGCTACATTCATTATGGGAG+AGG | + | contig304end:4132-4151 | MsG0080048404.01.T01:intron | 45.0% | |
| TAGCTAGACTCTGCTCCTTT+AGG | + | contig304end:3977-3996 | MsG0080048404.01.T01:CDS | 45.0% | |
| TAGGTCCTCCAATCATCCAT+TGG | + | contig304end:4677-4696 | MsG0080048404.01.T01:intron | 45.0% | |
| TATTGGTCATGGCGTGTTTG+AGG | + | contig304end:4431-4450 | MsG0080048404.01.T01:CDS | 45.0% | |
| TCAGACTCCATCTCGAATAC+GGG | + | contig304end:3954-3973 | MsG0080048404.01.T01:CDS | 45.0% | |
| TCTTGCTAGAGCAACTACAG+TGG | + | contig304end:5163-5182 | MsG0080048404.01.T01:three_prime_UTR | 45.0% | |
| TTCAGACAAAGGTGAAGGCA+AGG | + | contig304end:4720-4739 | MsG0080048404.01.T01:CDS | 45.0% | |
| ! | GAGGCCATTGCATTTTCACT+AGG | - | contig304end:3936-3955 | None:intergenic | 45.0% |
| ! | TCCATCACTGAAAAGCACGA+CGG | + | contig304end:4465-4484 | MsG0080048404.01.T01:intron | 45.0% |
| !! | GGATGGACTGGAACATCTAT+TGG | + | contig304end:4414-4433 | MsG0080048404.01.T01:CDS | 45.0% |
| CCTCCTGTCATGACTCCTAA+AGG | - | contig304end:3995-4014 | None:intergenic | 50.0% | |
| CGATTGGATGACCTTGCTCA+AGG | + | contig304end:4547-4566 | MsG0080048404.01.T01:CDS | 50.0% | |
| CGTATTCGAGATGGAGTCTG+AGG | - | contig304end:3955-3974 | None:intergenic | 50.0% | |
| CTAGCTACCCGTATTCGAGA+TGG | - | contig304end:3964-3983 | None:intergenic | 50.0% | |
| GCAACAAGCTTGACAGGTGA+GGG | - | contig304end:4054-4073 | None:intergenic | 50.0% | |
| GCTCAGTTGATTGGATGGAC+TGG | + | contig304end:4402-4421 | MsG0080048404.01.T01:CDS | 50.0% | |
| TGGCTGCTCAGTTGATTGGA+TGG | + | contig304end:4397-4416 | MsG0080048404.01.T01:CDS | 50.0% | |
| ! | CCTTTAGGAGTCATGACAGG+AGG | + | contig304end:3992-4011 | MsG0080048404.01.T01:CDS | 50.0% |
| ! | GCTCCTTTAGGAGTCATGAC+AGG | + | contig304end:3989-4008 | MsG0080048404.01.T01:CDS | 50.0% |
| ! | TCATTATGGGAGAGGGGTAC+TGG | + | contig304end:4140-4159 | MsG0080048404.01.T01:intron | 50.0% |
| ! | TCCGTCGTGCTTTTCAGTGA+TGG | - | contig304end:4469-4488 | None:intergenic | 50.0% |
| !! | CATTATGGGAGAGGGGTACT+GGG | + | contig304end:4141-4160 | MsG0080048404.01.T01:intron | 50.0% |
| !! | GTGTTGGCTGCTCAGTTGAT+TGG | + | contig304end:4393-4412 | MsG0080048404.01.T01:CDS | 50.0% |
| GGCAACAAGCTTGACAGGTG+AGG | - | contig304end:4055-4074 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| contig304end | gene | 3922 | 5246 | 3922 | ID=MsG0080048404.01;Name=MsG0080048404.01 |
| contig304end | mRNA | 3922 | 5246 | 3922 | ID=MsG0080048404.01.T01;Parent=MsG0080048404.01;Name=MsG0080048404.01.T01;_AED=0.49;_eAED=0.57;_QI=0|0.75|0.8|1|0.75|0.6|5|392|122 |
| contig304end | exon | 3922 | 4038 | 3922 | ID=MsG0080048404.01.T01:exon:10573;Parent=MsG0080048404.01.T01 |
| contig304end | exon | 4390 | 4452 | 4390 | ID=MsG0080048404.01.T01:exon:10574;Parent=MsG0080048404.01.T01 |
| contig304end | exon | 4532 | 4603 | 4532 | ID=MsG0080048404.01.T01:exon:10575;Parent=MsG0080048404.01.T01 |
| contig304end | exon | 4680 | 4895 | 4680 | ID=MsG0080048404.01.T01:exon:10576;Parent=MsG0080048404.01.T01 |
| contig304end | exon | 4954 | 5246 | 4954 | ID=MsG0080048404.01.T01:exon:10577;Parent=MsG0080048404.01.T01 |
| contig304end | CDS | 3922 | 4038 | 3922 | ID=MsG0080048404.01.T01:cds;Parent=MsG0080048404.01.T01 |
| contig304end | CDS | 4390 | 4452 | 4390 | ID=MsG0080048404.01.T01:cds;Parent=MsG0080048404.01.T01 |
| contig304end | CDS | 4532 | 4603 | 4532 | ID=MsG0080048404.01.T01:cds;Parent=MsG0080048404.01.T01 |
| contig304end | CDS | 4680 | 4796 | 4680 | ID=MsG0080048404.01.T01:cds;Parent=MsG0080048404.01.T01 |
| contig304end | three_prime_UTR | 4797 | 4895 | 4797 | ID=MsG0080048404.01.T01:three_prime_utr;Parent=MsG0080048404.01.T01 |
| contig304end | three_prime_UTR | 4954 | 5246 | 4954 | ID=MsG0080048404.01.T01:three_prime_utr;Parent=MsG0080048404.01.T01 |
| Gene Sequence |
| Protein sequence |
