Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007867.01.T01 | XP_003594771.2 | 93.498 | 323 | 21 | 0 | 12 | 334 | 67 | 389 | 0 | 627 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007867.01.T01 | P23535 | 75.949 | 316 | 74 | 2 | 20 | 334 | 1 | 315 | 0 | 508 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007867.01.T01 | Q2HU12 | 93.498 | 323 | 21 | 0 | 12 | 334 | 67 | 389 | 0.0 | 627 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047884.01 | MsG0280007867.01 | 0.800176 | 1.629699e-48 | 7.537719e-46 |
| MsG0080048748.01 | MsG0280007867.01 | 0.800966 | 1.124547e-48 | 5.307081e-46 |
| MsG0080048938.01 | MsG0280007867.01 | 0.807039 | 6.139754e-50 | 3.384482e-47 |
| MsG0080049070.01 | MsG0280007867.01 | 0.807398 | 5.155393e-50 | 2.868557e-47 |
| MsG0180000017.01 | MsG0280007867.01 | 0.836007 | 1.203830e-56 | 1.497496e-53 |
| MsG0180000200.01 | MsG0280007867.01 | 0.800230 | 1.588471e-48 | 7.357431e-46 |
| MsG0180000489.01 | MsG0280007867.01 | 0.829453 | 5.103368e-55 | 5.225424e-52 |
| MsG0180000491.01 | MsG0280007867.01 | 0.810551 | 1.089830e-50 | 6.588888e-48 |
| MsG0180000549.01 | MsG0280007867.01 | 0.805259 | 1.455288e-49 | 7.663558e-47 |
| MsG0180000599.01 | MsG0280007867.01 | 0.836391 | 9.619340e-57 | 1.210546e-53 |
| MsG0180000843.01 | MsG0280007867.01 | 0.814161 | 1.773891e-51 | 1.181335e-48 |
| MsG0180000942.01 | MsG0280007867.01 | 0.873332 | 1.595821e-67 | 6.898791e-64 |
| MsG0180000977.01 | MsG0280007867.01 | 0.822326 | 2.514670e-53 | 2.098141e-50 |
| MsG0180001119.01 | MsG0280007867.01 | 0.802746 | 4.846239e-49 | 2.392693e-46 |
| MsG0180001548.01 | MsG0280007867.01 | 0.811222 | 7.797612e-51 | 4.799363e-48 |
| MsG0180001591.01 | MsG0280007867.01 | 0.810427 | 1.159214e-50 | 6.985314e-48 |
| MsG0180001704.01 | MsG0280007867.01 | 0.815131 | 1.081584e-51 | 7.394185e-49 |
| MsG0180002700.01 | MsG0280007867.01 | 0.819504 | 1.121785e-52 | 8.648584e-50 |
| MsG0180003748.01 | MsG0280007867.01 | 0.821210 | 4.557457e-53 | 3.684495e-50 |
| MsG0180004106.01 | MsG0280007867.01 | 0.851654 | 7.710634e-61 | 1.571473e-57 |
| MsG0180005339.01 | MsG0280007867.01 | 0.838229 | 3.255560e-57 | 4.332306e-54 |
| MsG0180005391.01 | MsG0280007867.01 | 0.821515 | 3.875852e-53 | 3.159881e-50 |
| MsG0180005639.01 | MsG0280007867.01 | 0.813703 | 2.237556e-51 | 1.471804e-48 |
| MsG0180005687.01 | MsG0280007867.01 | 0.818643 | 1.761247e-52 | 1.325769e-49 |
| MsG0180005829.01 | MsG0280007867.01 | 0.807449 | 5.027580e-50 | 2.801118e-47 |
| MsG0280006552.01 | MsG0280007867.01 | 0.881072 | 3.252475e-70 | 1.878337e-66 |
| MsG0280006553.01 | MsG0280007867.01 | 0.847117 | 1.416608e-59 | 2.492330e-56 |
| MsG0280006706.01 | MsG0280007867.01 | 0.812616 | 3.875469e-51 | 2.475726e-48 |
| MsG0280007867.01 | MsG0280008098.01 | 0.813523 | 2.451964e-51 | 1.604977e-48 |
| MsG0280007867.01 | MsG0280008419.01 | 0.816749 | 4.709107e-52 | 3.365393e-49 |
| MsG0280007867.01 | MsG0280009435.01 | 0.819904 | 9.092560e-53 | 7.088608e-50 |
| MsG0280007867.01 | MsG0280009436.01 | 0.822909 | 1.840825e-53 | 1.561545e-50 |
| MsG0280007867.01 | MsG0280009507.01 | 0.812742 | 3.637590e-51 | 2.331469e-48 |
| MsG0280007867.01 | MsG0280009624.01 | 0.807200 | 5.677068e-50 | 3.142546e-47 |
| MsG0280007867.01 | MsG0280009756.01 | 0.821733 | 3.450676e-53 | 2.830681e-50 |
| MsG0280007867.01 | MsG0280009757.01 | 0.830186 | 3.383254e-55 | 3.538904e-52 |
| MsG0280007867.01 | MsG0280009901.01 | 0.824227 | 9.046195e-54 | 7.964623e-51 |
| MsG0280007867.01 | MsG0280009960.01 | 0.825466 | 4.616112e-54 | 4.210622e-51 |
| MsG0280007867.01 | MsG0280011110.01 | -0.828239 | 1.004002e-54 | 9.921706e-52 |
| MsG0280007867.01 | MsG0380014386.01 | 0.834442 | 2.989940e-56 | 3.548765e-53 |
| MsG0280007867.01 | MsG0380014510.01 | 0.806614 | 7.551054e-50 | 4.116898e-47 |
| MsG0280007867.01 | MsG0380014517.01 | 0.821679 | 3.552434e-53 | 2.909735e-50 |
| MsG0280007867.01 | MsG0380014794.01 | 0.800681 | 1.285832e-48 | 6.024121e-46 |
| MsG0280007867.01 | MsG0380014909.01 | 0.820343 | 7.211834e-53 | 5.691358e-50 |
| MsG0280007867.01 | MsG0380014982.01 | 0.807732 | 4.378037e-50 | 2.457258e-47 |
| MsG0280007867.01 | MsG0480018670.01 | 0.810583 | 1.072703e-50 | 6.491045e-48 |
| MsG0280007867.01 | MsG0480019313.01 | 0.841637 | 4.212176e-58 | 6.227660e-55 |
| MsG0280007867.01 | MsG0480019384.01 | 0.813060 | 3.099318e-51 | 2.003213e-48 |
| MsG0280007867.01 | MsG0480019501.01 | 0.806743 | 7.092393e-50 | 3.879730e-47 |
| MsG0280007867.01 | MsG0480020229.01 | 0.847450 | 1.147878e-59 | 2.041093e-56 |
| MsG0280007867.01 | MsG0480020433.01 | 0.816722 | 4.776355e-52 | 3.410835e-49 |
| MsG0280007867.01 | MsG0480020473.01 | 0.830253 | 3.258911e-55 | 3.415414e-52 |
| MsG0280007867.01 | MsG0480021207.01 | 0.805397 | 1.361615e-49 | 7.195979e-47 |
| MsG0280007867.01 | MsG0480021377.01 | 0.845582 | 3.711689e-59 | 6.214004e-56 |
| MsG0280007867.01 | MsG0480021406.01 | 0.812319 | 4.499884e-51 | 2.852038e-48 |
| MsG0280007867.01 | MsG0480021564.01 | 0.804790 | 1.824194e-49 | 9.491774e-47 |
| MsG0280007867.01 | MsG0480021830.01 | 0.815559 | 8.689087e-52 | 6.010638e-49 |
| MsG0280007867.01 | MsG0480022065.01 | 0.836927 | 7.024385e-57 | 8.983216e-54 |
| MsG0280007867.01 | MsG0480022162.01 | 0.835791 | 1.365791e-56 | 1.687904e-53 |
| MsG0280007867.01 | MsG0480022240.01 | 0.813857 | 2.070386e-51 | 1.367450e-48 |
| MsG0280007867.01 | MsG0480022535.01 | 0.837002 | 6.718135e-57 | 8.611766e-54 |
| MsG0280007867.01 | MsG0480022918.01 | 0.843881 | 1.066635e-58 | 1.692358e-55 |
| MsG0280007867.01 | MsG0480023150.01 | 0.806672 | 7.341219e-50 | 4.008397e-47 |
| MsG0280007867.01 | MsG0480023190.01 | 0.804235 | 2.381012e-49 | 1.221211e-46 |
| MsG0280007867.01 | MsG0480023406.01 | 0.836590 | 8.557421e-57 | 1.083296e-53 |
| MsG0280007867.01 | MsG0580024340.01 | 0.866946 | 1.965682e-65 | 6.744857e-62 |
| MsG0280007867.01 | MsG0580024717.01 | 0.808656 | 2.782419e-50 | 1.599924e-47 |
| MsG0280007867.01 | MsG0580024759.01 | 0.828823 | 7.255940e-55 | 7.293020e-52 |
| MsG0280007867.01 | MsG0580025226.01 | 0.843576 | 1.287134e-58 | 2.022688e-55 |
| MsG0280007867.01 | MsG0580025301.01 | 0.812396 | 4.331083e-51 | 2.750807e-48 |
| MsG0280007867.01 | MsG0580025625.01 | 0.816975 | 4.190250e-52 | 3.013338e-49 |
| MsG0280007867.01 | MsG0580025644.01 | 0.820019 | 8.557631e-53 | 6.693450e-50 |
| MsG0280007867.01 | MsG0580025827.01 | 0.800406 | 1.463052e-48 | 6.806948e-46 |
| MsG0280007867.01 | MsG0580026031.01 | 0.806748 | 7.074150e-50 | 3.870274e-47 |
| MsG0280007867.01 | MsG0580026498.01 | 0.813679 | 2.266026e-51 | 1.489508e-48 |
| MsG0280007867.01 | MsG0580027789.01 | 0.814052 | 1.875004e-51 | 1.244984e-48 |
| MsG0280007867.01 | MsG0580028016.01 | 0.826309 | 2.911645e-54 | 2.720563e-51 |
| MsG0280007867.01 | MsG0580028179.01 | 0.823178 | 1.593021e-53 | 1.361617e-50 |
| MsG0280007867.01 | MsG0580028419.01 | 0.811176 | 7.980391e-51 | 4.905853e-48 |
| MsG0280007867.01 | MsG0580028422.01 | 0.813257 | 2.805593e-51 | 1.823058e-48 |
| MsG0280007867.01 | MsG0580028552.01 | 0.807359 | 5.254023e-50 | 2.920337e-47 |
| MsG0280007867.01 | MsG0580029394.01 | 0.803242 | 3.827228e-49 | 1.913582e-46 |
| MsG0280007867.01 | MsG0580029433.01 | 0.824160 | 9.381731e-54 | 8.244603e-51 |
| MsG0280007867.01 | MsG0680030680.01 | 0.852493 | 4.452386e-61 | 9.319965e-58 |
| MsG0280007867.01 | MsG0680030907.01 | 0.813886 | 2.039409e-51 | 1.348115e-48 |
| MsG0280007867.01 | MsG0680031996.01 | 0.857443 | 1.626138e-62 | 4.014210e-59 |
| MsG0280007867.01 | MsG0680031997.01 | 0.814718 | 1.335818e-51 | 9.031322e-49 |
| MsG0280007867.01 | MsG0680032002.01 | 0.810235 | 1.275203e-50 | 7.645528e-48 |
| MsG0280007867.01 | MsG0680032003.01 | 0.808604 | 2.854452e-50 | 1.639129e-47 |
| MsG0280007867.01 | MsG0680032246.01 | 0.803253 | 3.807935e-49 | 1.904505e-46 |
| MsG0280007867.01 | MsG0680032254.01 | 0.820752 | 5.811045e-53 | 4.638091e-50 |
| MsG0280007867.01 | MsG0680032413.01 | 0.825522 | 4.477859e-54 | 4.091140e-51 |
| MsG0280007867.01 | MsG0680034028.01 | 0.827929 | 1.192594e-54 | 1.167892e-51 |
| MsG0280007867.01 | MsG0780035960.01 | 0.807423 | 5.092403e-50 | 2.835280e-47 |
| MsG0280007867.01 | MsG0780035965.01 | 0.812885 | 3.385225e-51 | 2.177830e-48 |
| MsG0280007867.01 | MsG0780036050.01 | 0.803627 | 3.185917e-49 | 1.608759e-46 |
| MsG0280007867.01 | MsG0780036116.01 | 0.802644 | 5.088563e-49 | 2.505666e-46 |
| MsG0280007867.01 | MsG0780036182.01 | 0.844854 | 5.842377e-59 | 9.556208e-56 |
| MsG0280007867.01 | MsG0780036509.01 | 0.819484 | 1.133887e-52 | 8.737082e-50 |
| MsG0280007867.01 | MsG0780036613.01 | 0.812901 | 3.357330e-51 | 2.160859e-48 |
| MsG0280007867.01 | MsG0780036620.01 | 0.855916 | 4.573928e-62 | 1.072927e-58 |
| MsG0280007867.01 | MsG0780036623.01 | 0.817529 | 3.146342e-52 | 2.296989e-49 |
| MsG0280007867.01 | MsG0780036624.01 | 0.803704 | 3.070551e-49 | 1.553546e-46 |
| MsG0280007867.01 | MsG0780037052.01 | -0.826777 | 2.252016e-54 | 2.132418e-51 |
| MsG0280007867.01 | MsG0780037351.01 | 0.828421 | 9.073890e-55 | 9.014966e-52 |
| MsG0280007867.01 | MsG0780037363.01 | 0.856006 | 4.304845e-62 | 1.012879e-58 |
| MsG0280007867.01 | MsG0780039161.01 | 0.824498 | 7.815368e-54 | 6.934299e-51 |
| MsG0280007867.01 | MsG0780040235.01 | 0.818126 | 2.306731e-52 | 1.711859e-49 |
| MsG0280007867.01 | MsG0780040278.01 | 0.812811 | 3.513589e-51 | 2.255865e-48 |
| MsG0280007867.01 | MsG0780040343.01 | 0.816105 | 6.565348e-52 | 4.609985e-49 |
| MsG0280007867.01 | MsG0780041004.01 | 0.801481 | 8.824018e-49 | 4.218650e-46 |
| MsG0280007867.01 | MsG0880041850.01 | 0.810359 | 1.198837e-50 | 7.211349e-48 |
| MsG0280007867.01 | MsG0880042000.01 | 0.814584 | 1.430024e-51 | 9.633371e-49 |
| MsG0280007867.01 | MsG0880042084.01 | 0.836661 | 8.212382e-57 | 1.041778e-53 |
| MsG0280007867.01 | MsG0880042086.01 | 0.881075 | 3.243377e-70 | 1.873337e-66 |
| MsG0280007867.01 | MsG0880042256.01 | 0.808172 | 3.528756e-50 | 2.003740e-47 |
| MsG0280007867.01 | MsG0880042343.01 | 0.814442 | 1.537488e-51 | 1.031772e-48 |
| MsG0280007867.01 | MsG0880042415.01 | 0.855114 | 7.839685e-62 | 1.790342e-58 |
| MsG0280007867.01 | MsG0880042416.01 | 0.880615 | 4.744042e-70 | 2.693085e-66 |
| MsG0280007867.01 | MsG0880042417.01 | 0.833208 | 6.084810e-56 | 6.959638e-53 |
| MsG0280007867.01 | MsG0880042948.01 | 0.838705 | 2.453811e-57 | 3.313717e-54 |
| MsG0280007867.01 | MsG0880043107.01 | 0.877400 | 6.476361e-69 | 3.252329e-65 |
| MsG0280007867.01 | MsG0880044099.01 | 0.823466 | 1.364080e-53 | 1.175429e-50 |
| MsG0280007867.01 | MsG0880044612.01 | 0.844006 | 9.873344e-59 | 1.572666e-55 |
| MsG0280007867.01 | MsG0880044615.01 | 0.821564 | 3.775685e-53 | 3.082635e-50 |
| MsG0280007867.01 | MsG0880044618.01 | 0.824027 | 1.008368e-53 | 8.827429e-51 |
| MsG0280007867.01 | MsG0880044619.01 | 0.853580 | 2.174709e-61 | 4.721675e-58 |
| MsG0280007867.01 | MsG0880044620.01 | 0.874429 | 6.799877e-68 | 3.060305e-64 |
| MsG0280007867.01 | MsG0880044623.01 | 0.805961 | 1.036779e-49 | 5.559456e-47 |
| MsG0280007867.01 | MsG0880044625.01 | 0.855025 | 8.317396e-62 | 1.894016e-58 |
| MsG0280007867.01 | MsG0880044626.01 | 0.837547 | 4.874552e-57 | 6.353261e-54 |
| MsG0280007867.01 | MsG0880044629.01 | 0.852195 | 5.411975e-61 | 1.122220e-57 |
| MsG0280007867.01 | MsG0880045378.01 | 0.801437 | 9.009076e-49 | 4.302292e-46 |
| MsG0280007867.01 | MsG0880045402.01 | 0.814519 | 1.478685e-51 | 9.943998e-49 |
| MsG0280007867.01 | MsG0880045423.01 | 0.808622 | 2.829712e-50 | 1.625610e-47 |
| MsG0280007867.01 | MsG0880045624.01 | 0.820356 | 7.161989e-53 | 5.654070e-50 |
| MsG0280007867.01 | MsG0880045927.01 | 0.850952 | 1.217110e-60 | 2.424781e-57 |
| MsG0280007867.01 | MsG0880046200.01 | 0.859276 | 4.625344e-63 | 1.214743e-59 |
| MsG0280007867.01 | MsG0880046207.01 | 0.808384 | 3.180348e-50 | 1.815968e-47 |
| MsG0280007867.01 | MsG0880046268.01 | 0.811485 | 6.837747e-51 | 4.237989e-48 |
| MsG0280007867.01 | MsG0880046434.01 | -0.820995 | 5.108749e-53 | 4.105786e-50 |
| MsG0280007867.01 | MsG0880046533.01 | 0.822079 | 2.870084e-53 | 2.377616e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007867.01.T01 | MTR_2g034440 | 93.498 | 323 | 21 | 0 | 12 | 334 | 13 | 335 | 0.0 | 623 |
| MsG0280007867.01.T01 | MTR_2g034470 | 95.253 | 316 | 14 | 1 | 19 | 334 | 28 | 342 | 0.0 | 615 |
| MsG0280007867.01.T01 | MTR_2g034470 | 95.130 | 308 | 14 | 1 | 27 | 334 | 1 | 307 | 0.0 | 596 |
| MsG0280007867.01.T01 | MTR_2g034480 | 76.398 | 322 | 75 | 1 | 13 | 334 | 19 | 339 | 0.0 | 509 |
| MsG0280007867.01.T01 | MTR_4g076570 | 55.449 | 312 | 134 | 4 | 21 | 330 | 22 | 330 | 1.75e-116 | 341 |
| MsG0280007867.01.T01 | MTR_1g052430 | 53.438 | 320 | 141 | 5 | 16 | 330 | 24 | 340 | 1.12e-113 | 335 |
| MsG0280007867.01.T01 | MTR_4g076470 | 52.698 | 315 | 139 | 5 | 21 | 334 | 23 | 328 | 2.96e-106 | 314 |
| MsG0280007867.01.T01 | MTR_4g076255 | 52.500 | 320 | 139 | 8 | 18 | 334 | 21 | 330 | 9.39e-106 | 313 |
| MsG0280007867.01.T01 | MTR_4g076490 | 49.408 | 338 | 153 | 7 | 2 | 330 | 71 | 399 | 8.93e-101 | 303 |
| MsG0280007867.01.T01 | MTR_4g076440 | 50.794 | 315 | 145 | 5 | 21 | 334 | 23 | 328 | 9.32e-101 | 300 |
| MsG0280007867.01.T01 | MTR_4g076500 | 46.746 | 338 | 167 | 6 | 4 | 334 | 58 | 389 | 9.50e-101 | 302 |
| MsG0280007867.01.T01 | MTR_4g076430 | 50.476 | 315 | 146 | 5 | 21 | 334 | 23 | 328 | 4.29e-99 | 296 |
| MsG0280007867.01.T01 | MTR_7g081350 | 39.815 | 324 | 182 | 7 | 2 | 321 | 11 | 325 | 5.01e-72 | 227 |
| MsG0280007867.01.T01 | MTR_6g088885 | 37.342 | 316 | 186 | 7 | 18 | 324 | 24 | 336 | 5.06e-68 | 221 |
| MsG0280007867.01.T01 | MTR_3g080410 | 39.185 | 319 | 183 | 7 | 18 | 327 | 23 | 339 | 3.78e-65 | 210 |
| MsG0280007867.01.T01 | MTR_7g081370 | 38.318 | 321 | 179 | 6 | 2 | 321 | 11 | 313 | 1.14e-64 | 207 |
| MsG0280007867.01.T01 | MTR_4g069940 | 37.879 | 330 | 193 | 8 | 1 | 321 | 10 | 336 | 1.38e-64 | 211 |
| MsG0280007867.01.T01 | MTR_4g088155 | 36.310 | 336 | 196 | 10 | 2 | 322 | 4 | 336 | 7.22e-64 | 209 |
| MsG0280007867.01.T01 | MTR_5g085580 | 38.291 | 316 | 184 | 7 | 21 | 327 | 25 | 338 | 1.28e-63 | 209 |
| MsG0280007867.01.T01 | MTR_8g012400 | 35.077 | 325 | 197 | 8 | 15 | 327 | 23 | 345 | 3.64e-63 | 207 |
| MsG0280007867.01.T01 | MTR_1g056640 | 37.072 | 321 | 190 | 8 | 16 | 327 | 34 | 351 | 6.04e-63 | 208 |
| MsG0280007867.01.T01 | MTR_4g052970 | 38.291 | 316 | 183 | 8 | 18 | 324 | 26 | 338 | 1.26e-61 | 201 |
| MsG0280007867.01.T01 | MTR_7g053500 | 34.062 | 320 | 197 | 8 | 20 | 327 | 25 | 342 | 1.69e-61 | 203 |
| MsG0280007867.01.T01 | MTR_3g116510 | 34.848 | 330 | 203 | 8 | 1 | 321 | 9 | 335 | 5.33e-61 | 202 |
| MsG0280007867.01.T01 | MTR_4g010200 | 36.893 | 309 | 186 | 6 | 22 | 322 | 34 | 341 | 5.39e-60 | 197 |
| MsG0280007867.01.T01 | MTR_1g077990 | 37.061 | 313 | 186 | 8 | 20 | 324 | 30 | 339 | 1.68e-58 | 194 |
| MsG0280007867.01.T01 | MTR_2g086530 | 35.625 | 320 | 184 | 10 | 18 | 324 | 5 | 315 | 1.68e-57 | 190 |
| MsG0280007867.01.T01 | MTR_2g086530 | 35.583 | 326 | 187 | 11 | 13 | 324 | 20 | 336 | 2.14e-57 | 191 |
| MsG0280007867.01.T01 | MTR_3g083580 | 34.234 | 333 | 196 | 6 | 18 | 334 | 23 | 348 | 4.70e-57 | 192 |
| MsG0280007867.01.T01 | MTR_1g007810 | 38.730 | 315 | 175 | 11 | 21 | 324 | 16 | 323 | 3.80e-56 | 186 |
| MsG0280007867.01.T01 | MTR_1g022160 | 35.577 | 312 | 189 | 8 | 21 | 322 | 24 | 333 | 4.70e-56 | 188 |
| MsG0280007867.01.T01 | MTR_4g084480 | 35.873 | 315 | 190 | 8 | 19 | 324 | 30 | 341 | 4.79e-56 | 187 |
| MsG0280007867.01.T01 | MTR_4g084480 | 35.873 | 315 | 190 | 8 | 19 | 324 | 23 | 334 | 5.19e-56 | 187 |
| MsG0280007867.01.T01 | MTR_4g084480 | 35.873 | 315 | 190 | 8 | 19 | 324 | 30 | 341 | 5.80e-56 | 187 |
| MsG0280007867.01.T01 | MTR_3g065460 | 38.095 | 315 | 182 | 7 | 21 | 324 | 24 | 336 | 9.67e-56 | 189 |
| MsG0280007867.01.T01 | MTR_1g031900 | 37.855 | 317 | 184 | 7 | 19 | 324 | 22 | 336 | 1.43e-55 | 189 |
| MsG0280007867.01.T01 | MTR_4g114850 | 34.194 | 310 | 191 | 8 | 22 | 321 | 27 | 333 | 1.96e-55 | 184 |
| MsG0280007867.01.T01 | MTR_1g031900 | 37.855 | 317 | 184 | 7 | 19 | 324 | 22 | 336 | 2.23e-55 | 188 |
| MsG0280007867.01.T01 | MTR_4g114850 | 34.194 | 310 | 191 | 8 | 22 | 321 | 27 | 333 | 2.92e-55 | 184 |
| MsG0280007867.01.T01 | MTR_1g022160 | 35.577 | 312 | 189 | 8 | 21 | 322 | 24 | 333 | 3.59e-55 | 187 |
| MsG0280007867.01.T01 | MTR_4g114850 | 33.654 | 312 | 196 | 7 | 22 | 324 | 27 | 336 | 3.70e-55 | 184 |
| MsG0280007867.01.T01 | MTR_1g022160 | 35.577 | 312 | 189 | 8 | 21 | 322 | 24 | 333 | 3.81e-55 | 187 |
| MsG0280007867.01.T01 | MTR_1g022160 | 35.577 | 312 | 189 | 8 | 21 | 322 | 24 | 333 | 3.90e-55 | 187 |
| MsG0280007867.01.T01 | MTR_4g124440 | 36.570 | 309 | 185 | 7 | 32 | 332 | 40 | 345 | 5.95e-55 | 187 |
| MsG0280007867.01.T01 | MTR_5g078200 | 38.730 | 315 | 180 | 7 | 21 | 324 | 23 | 335 | 1.61e-54 | 189 |
| MsG0280007867.01.T01 | MTR_7g026340 | 36.943 | 314 | 180 | 13 | 21 | 324 | 23 | 328 | 4.16e-53 | 181 |
| MsG0280007867.01.T01 | MTR_5g078200 | 38.816 | 304 | 173 | 7 | 32 | 324 | 1 | 302 | 1.34e-52 | 183 |
| MsG0280007867.01.T01 | MTR_2g027560 | 33.750 | 320 | 201 | 6 | 19 | 328 | 26 | 344 | 2.34e-52 | 180 |
| MsG0280007867.01.T01 | MTR_8g085720 | 33.235 | 340 | 213 | 7 | 6 | 334 | 11 | 347 | 3.05e-52 | 180 |
| MsG0280007867.01.T01 | MTR_4g132280 | 34.385 | 317 | 195 | 6 | 16 | 321 | 40 | 354 | 3.54e-51 | 177 |
| MsG0280007867.01.T01 | MTR_8g092070 | 31.677 | 322 | 210 | 6 | 21 | 334 | 34 | 353 | 9.92e-51 | 177 |
| MsG0280007867.01.T01 | MTR_4g112025 | 31.953 | 338 | 219 | 6 | 1 | 328 | 11 | 347 | 4.40e-50 | 174 |
| MsG0280007867.01.T01 | MTR_1g010120 | 34.951 | 309 | 192 | 6 | 21 | 321 | 26 | 333 | 7.95e-50 | 173 |
| MsG0280007867.01.T01 | MTR_8g102340 | 33.754 | 317 | 164 | 9 | 17 | 324 | 24 | 303 | 8.85e-50 | 173 |
| MsG0280007867.01.T01 | MTR_7g085390 | 33.333 | 324 | 203 | 7 | 21 | 334 | 26 | 346 | 1.08e-49 | 172 |
| MsG0280007867.01.T01 | MTR_6g032820 | 33.750 | 320 | 198 | 6 | 21 | 328 | 26 | 343 | 2.32e-49 | 171 |
| MsG0280007867.01.T01 | MTR_2g019345 | 34.337 | 332 | 202 | 10 | 6 | 324 | 4 | 332 | 4.63e-49 | 169 |
| MsG0280007867.01.T01 | MTR_8g012400 | 34.586 | 266 | 160 | 8 | 74 | 327 | 2 | 265 | 5.25e-48 | 166 |
| MsG0280007867.01.T01 | MTR_1g053320 | 32.209 | 326 | 211 | 6 | 13 | 328 | 22 | 347 | 1.00e-47 | 167 |
| MsG0280007867.01.T01 | MTR_7g053500 | 33.083 | 266 | 164 | 8 | 74 | 327 | 2 | 265 | 3.28e-45 | 159 |
| MsG0280007867.01.T01 | MTR_3g108600 | 33.766 | 308 | 178 | 6 | 21 | 321 | 31 | 319 | 4.22e-45 | 160 |
| MsG0280007867.01.T01 | MTR_3g095050 | 31.077 | 325 | 206 | 9 | 21 | 334 | 34 | 351 | 5.78e-44 | 157 |
| MsG0280007867.01.T01 | MTR_4g083500 | 35.093 | 322 | 192 | 12 | 14 | 324 | 37 | 352 | 2.45e-42 | 154 |
| MsG0280007867.01.T01 | MTR_3g031770 | 29.524 | 315 | 213 | 6 | 21 | 328 | 27 | 339 | 6.27e-41 | 149 |
| MsG0280007867.01.T01 | MTR_5g081720 | 32.886 | 298 | 183 | 11 | 47 | 334 | 63 | 353 | 6.71e-37 | 136 |
| MsG0280007867.01.T01 | MTR_3g116510 | 36.139 | 202 | 119 | 6 | 129 | 321 | 1 | 201 | 2.47e-35 | 131 |
| MsG0280007867.01.T01 | MTR_4g134280 | 34.615 | 234 | 143 | 6 | 108 | 334 | 2 | 232 | 4.15e-34 | 129 |
| MsG0280007867.01.T01 | MTR_4g036680 | 49.474 | 95 | 45 | 3 | 238 | 330 | 80 | 173 | 7.10e-23 | 95.1 |
| MsG0280007867.01.T01 | MTR_4g036680 | 61.429 | 70 | 26 | 1 | 15 | 83 | 15 | 84 | 4.29e-20 | 87.8 |
| MsG0280007867.01.T01 | MTR_4g036775 | 49.474 | 95 | 45 | 3 | 238 | 330 | 80 | 173 | 3.18e-22 | 93.6 |
| MsG0280007867.01.T01 | MTR_4g036775 | 54.762 | 84 | 37 | 1 | 1 | 83 | 1 | 84 | 1.99e-20 | 88.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007867.01.T01 | AT4G16260 | 60.429 | 326 | 120 | 5 | 12 | 334 | 15 | 334 | 1.91e-140 | 401 |
| MsG0280007867.01.T01 | AT4G16260 | 61.093 | 311 | 112 | 5 | 27 | 334 | 1 | 305 | 8.78e-134 | 383 |
| MsG0280007867.01.T01 | AT3G57270 | 50.779 | 321 | 151 | 4 | 17 | 334 | 23 | 339 | 3.83e-109 | 322 |
| MsG0280007867.01.T01 | AT3G57240 | 51.543 | 324 | 145 | 7 | 13 | 334 | 27 | 340 | 2.94e-104 | 309 |
| MsG0280007867.01.T01 | AT3G57260 | 47.619 | 336 | 165 | 5 | 1 | 334 | 12 | 338 | 1.67e-101 | 302 |
| MsG0280007867.01.T01 | AT3G57260 | 47.619 | 336 | 165 | 5 | 1 | 334 | 28 | 354 | 2.06e-101 | 303 |
| MsG0280007867.01.T01 | AT5G20390 | 37.764 | 331 | 193 | 7 | 6 | 330 | 18 | 341 | 3.44e-71 | 225 |
| MsG0280007867.01.T01 | AT5G56590 | 37.539 | 317 | 186 | 7 | 18 | 324 | 23 | 337 | 3.42e-70 | 227 |
| MsG0280007867.01.T01 | AT2G16230 | 40.439 | 319 | 179 | 7 | 15 | 324 | 19 | 335 | 7.44e-69 | 223 |
| MsG0280007867.01.T01 | AT5G20340 | 38.580 | 324 | 188 | 6 | 12 | 330 | 34 | 351 | 8.33e-69 | 219 |
| MsG0280007867.01.T01 | AT5G20330 | 38.509 | 322 | 187 | 6 | 14 | 330 | 27 | 342 | 2.64e-66 | 212 |
| MsG0280007867.01.T01 | AT4G34480 | 39.450 | 327 | 187 | 7 | 4 | 321 | 9 | 333 | 5.22e-65 | 209 |
| MsG0280007867.01.T01 | AT4G29360 | 40.506 | 316 | 176 | 7 | 18 | 324 | 24 | 336 | 7.52e-64 | 211 |
| MsG0280007867.01.T01 | AT4G29360 | 40.506 | 316 | 176 | 7 | 18 | 324 | 34 | 346 | 9.17e-64 | 211 |
| MsG0280007867.01.T01 | AT4G34480 | 39.450 | 327 | 187 | 7 | 4 | 321 | 9 | 333 | 2.71e-63 | 209 |
| MsG0280007867.01.T01 | AT2G26600 | 36.218 | 312 | 188 | 7 | 22 | 324 | 35 | 344 | 4.38e-63 | 205 |
| MsG0280007867.01.T01 | AT1G77790 | 37.975 | 316 | 181 | 7 | 17 | 324 | 26 | 334 | 4.76e-63 | 204 |
| MsG0280007867.01.T01 | AT5G42720 | 36.646 | 322 | 194 | 7 | 12 | 324 | 17 | 337 | 2.95e-62 | 204 |
| MsG0280007867.01.T01 | AT2G05790 | 37.107 | 318 | 189 | 7 | 19 | 327 | 23 | 338 | 3.61e-61 | 202 |
| MsG0280007867.01.T01 | AT3G07320 | 34.169 | 319 | 194 | 9 | 22 | 327 | 26 | 341 | 1.07e-60 | 201 |
| MsG0280007867.01.T01 | AT5G20560 | 37.013 | 308 | 184 | 6 | 21 | 323 | 34 | 336 | 1.26e-60 | 197 |
| MsG0280007867.01.T01 | AT1G33220 | 37.417 | 302 | 178 | 6 | 14 | 310 | 27 | 322 | 4.41e-60 | 196 |
| MsG0280007867.01.T01 | AT2G27500 | 35.535 | 318 | 194 | 7 | 18 | 326 | 26 | 341 | 5.74e-60 | 197 |
| MsG0280007867.01.T01 | AT1G32860 | 35.737 | 319 | 191 | 8 | 20 | 327 | 28 | 343 | 7.86e-60 | 198 |
| MsG0280007867.01.T01 | AT2G27500 | 35.535 | 318 | 194 | 7 | 18 | 326 | 26 | 341 | 8.15e-60 | 197 |
| MsG0280007867.01.T01 | AT3G15800 | 36.102 | 313 | 188 | 8 | 22 | 324 | 44 | 354 | 4.61e-59 | 195 |
| MsG0280007867.01.T01 | AT5G55180 | 36.278 | 317 | 189 | 8 | 21 | 327 | 27 | 340 | 1.76e-58 | 196 |
| MsG0280007867.01.T01 | AT5G55180 | 36.278 | 317 | 189 | 8 | 21 | 327 | 27 | 340 | 1.77e-58 | 195 |
| MsG0280007867.01.T01 | AT4G26830 | 35.443 | 316 | 186 | 9 | 21 | 324 | 25 | 334 | 5.87e-58 | 194 |
| MsG0280007867.01.T01 | AT4G26830 | 35.093 | 322 | 191 | 9 | 15 | 324 | 23 | 338 | 6.22e-58 | 194 |
| MsG0280007867.01.T01 | AT2G01630 | 37.460 | 315 | 184 | 6 | 21 | 324 | 23 | 335 | 8.67e-58 | 192 |
| MsG0280007867.01.T01 | AT2G01630 | 37.460 | 315 | 184 | 6 | 21 | 324 | 23 | 335 | 3.23e-57 | 191 |
| MsG0280007867.01.T01 | AT1G77780 | 35.831 | 307 | 187 | 7 | 22 | 324 | 25 | 325 | 6.76e-57 | 189 |
| MsG0280007867.01.T01 | AT5G42100 | 37.224 | 317 | 186 | 8 | 19 | 324 | 25 | 339 | 7.79e-57 | 190 |
| MsG0280007867.01.T01 | AT5G42100 | 37.224 | 317 | 186 | 8 | 19 | 324 | 25 | 339 | 9.28e-57 | 190 |
| MsG0280007867.01.T01 | AT2G01630 | 37.460 | 315 | 184 | 6 | 21 | 324 | 23 | 335 | 1.72e-56 | 191 |
| MsG0280007867.01.T01 | AT1G66250 | 35.737 | 319 | 193 | 6 | 18 | 326 | 29 | 345 | 3.41e-55 | 188 |
| MsG0280007867.01.T01 | AT4G14080 | 33.229 | 319 | 198 | 9 | 18 | 324 | 39 | 354 | 2.52e-54 | 185 |
| MsG0280007867.01.T01 | AT1G30080 | 34.036 | 332 | 209 | 7 | 1 | 324 | 16 | 345 | 2.95e-54 | 182 |
| MsG0280007867.01.T01 | AT3G23770 | 34.268 | 321 | 195 | 9 | 18 | 324 | 34 | 352 | 3.69e-54 | 184 |
| MsG0280007867.01.T01 | AT4G18340 | 35.714 | 322 | 187 | 9 | 16 | 324 | 29 | 343 | 4.53e-54 | 182 |
| MsG0280007867.01.T01 | AT4G18340 | 35.714 | 322 | 187 | 9 | 16 | 324 | 29 | 343 | 5.07e-54 | 182 |
| MsG0280007867.01.T01 | AT1G30080 | 34.036 | 332 | 209 | 7 | 1 | 324 | 16 | 345 | 5.53e-54 | 182 |
| MsG0280007867.01.T01 | AT5G58090 | 33.544 | 316 | 201 | 5 | 15 | 322 | 16 | 330 | 7.31e-54 | 184 |
| MsG0280007867.01.T01 | AT3G61810 | 34.462 | 325 | 194 | 8 | 21 | 334 | 55 | 371 | 1.48e-53 | 180 |
| MsG0280007867.01.T01 | AT1G11820 | 33.654 | 312 | 194 | 6 | 21 | 321 | 44 | 353 | 5.50e-52 | 176 |
| MsG0280007867.01.T01 | AT1G11820 | 33.654 | 312 | 194 | 6 | 21 | 321 | 44 | 353 | 5.89e-51 | 176 |
| MsG0280007867.01.T01 | AT5G18220 | 33.333 | 321 | 202 | 7 | 19 | 331 | 28 | 344 | 1.09e-50 | 176 |
| MsG0280007867.01.T01 | AT5G24318 | 33.535 | 331 | 198 | 10 | 4 | 321 | 13 | 334 | 2.09e-50 | 172 |
| MsG0280007867.01.T01 | AT1G11820 | 33.654 | 312 | 194 | 6 | 21 | 321 | 44 | 353 | 2.42e-50 | 175 |
| MsG0280007867.01.T01 | AT4G31140 | 33.657 | 309 | 196 | 5 | 21 | 321 | 27 | 334 | 6.93e-50 | 173 |
| MsG0280007867.01.T01 | AT3G04010 | 34.259 | 324 | 199 | 8 | 21 | 334 | 33 | 352 | 6.97e-50 | 173 |
| MsG0280007867.01.T01 | AT5G24318 | 33.634 | 333 | 195 | 11 | 4 | 321 | 13 | 334 | 1.91e-49 | 171 |
| MsG0280007867.01.T01 | AT5G24318 | 33.535 | 331 | 198 | 10 | 4 | 321 | 13 | 334 | 2.06e-49 | 171 |
| MsG0280007867.01.T01 | AT5G58480 | 31.988 | 322 | 209 | 6 | 21 | 334 | 26 | 345 | 6.32e-49 | 171 |
| MsG0280007867.01.T01 | AT3G55430 | 36.943 | 314 | 178 | 15 | 19 | 321 | 27 | 331 | 2.92e-48 | 168 |
| MsG0280007867.01.T01 | AT3G13560 | 33.951 | 324 | 201 | 7 | 12 | 324 | 17 | 338 | 7.83e-48 | 168 |
| MsG0280007867.01.T01 | AT3G13560 | 33.951 | 324 | 201 | 7 | 12 | 324 | 17 | 338 | 7.83e-48 | 168 |
| MsG0280007867.01.T01 | AT3G13560 | 33.951 | 324 | 201 | 7 | 12 | 324 | 17 | 338 | 7.83e-48 | 168 |
| MsG0280007867.01.T01 | AT3G13560 | 33.951 | 324 | 201 | 7 | 12 | 324 | 17 | 338 | 7.83e-48 | 168 |
| MsG0280007867.01.T01 | AT3G13560 | 33.951 | 324 | 201 | 7 | 12 | 324 | 17 | 338 | 7.83e-48 | 168 |
| MsG0280007867.01.T01 | AT2G27500 | 35.472 | 265 | 160 | 7 | 71 | 326 | 1 | 263 | 9.49e-48 | 163 |
| MsG0280007867.01.T01 | AT2G26600 | 36.508 | 252 | 149 | 7 | 82 | 324 | 1 | 250 | 1.16e-47 | 162 |
| MsG0280007867.01.T01 | AT4G17180 | 33.229 | 319 | 197 | 8 | 19 | 328 | 23 | 334 | 1.86e-47 | 167 |
| MsG0280007867.01.T01 | AT2G19440 | 33.025 | 324 | 203 | 9 | 21 | 334 | 21 | 340 | 2.29e-47 | 166 |
| MsG0280007867.01.T01 | AT2G19440 | 33.025 | 324 | 203 | 9 | 21 | 334 | 21 | 340 | 2.29e-47 | 166 |
| MsG0280007867.01.T01 | AT3G24330 | 31.065 | 338 | 221 | 8 | 1 | 328 | 20 | 355 | 1.31e-46 | 165 |
| MsG0280007867.01.T01 | AT1G64760 | 32.407 | 324 | 205 | 9 | 21 | 334 | 25 | 344 | 4.82e-46 | 163 |
| MsG0280007867.01.T01 | AT1G64760 | 32.407 | 324 | 205 | 9 | 21 | 334 | 25 | 344 | 4.82e-46 | 163 |
| MsG0280007867.01.T01 | AT5G64790 | 30.519 | 308 | 205 | 6 | 22 | 321 | 29 | 335 | 1.45e-42 | 154 |
| MsG0280007867.01.T01 | AT3G46570 | 34.139 | 331 | 198 | 14 | 6 | 324 | 13 | 335 | 2.24e-42 | 150 |
| MsG0280007867.01.T01 | AT5G20870 | 32.907 | 313 | 189 | 10 | 39 | 334 | 48 | 356 | 2.85e-42 | 153 |
| MsG0280007867.01.T01 | AT3G55780 | 32.326 | 331 | 199 | 13 | 21 | 334 | 31 | 353 | 1.86e-40 | 146 |
| MsG0280007867.01.T01 | AT2G39640 | 32.537 | 335 | 203 | 14 | 1 | 324 | 9 | 331 | 4.57e-40 | 148 |
| MsG0280007867.01.T01 | AT4G34480 | 39.640 | 222 | 123 | 7 | 109 | 321 | 3 | 222 | 6.88e-36 | 134 |
| MsG0280007867.01.T01 | AT5G24318 | 34.314 | 204 | 111 | 8 | 132 | 321 | 1 | 195 | 4.06e-26 | 106 |
Find 64 sgRNAs with CRISPR-Local
Find 73 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTATTGAGACTTATATATT+TGG | 0.120186 | 2:-22036537 | MsG0280007867.01.T01:CDS |
| AAATTTATTTGATGCTTTAT+TGG | 0.136038 | 2:-22036730 | MsG0280007867.01.T01:CDS |
| CCTGAGTTGGAGAAACATTT+TGG | 0.160115 | 2:-22036489 | MsG0280007867.01.T01:CDS |
| ATAAAGCATCAAATAAATTT+TGG | 0.205515 | 2:+22036733 | None:intergenic |
| GATCATATAGCCTCATTCTT+TGG | 0.245537 | 2:+22037282 | None:intergenic |
| AAGTGATGTGAGGTCATATT+TGG | 0.246765 | 2:-22036910 | MsG0280007867.01.T01:CDS |
| CTTCTCCAAATGTTGTAGTT+AGG | 0.253024 | 2:-22036773 | MsG0280007867.01.T01:CDS |
| TATTGAAGTGAGATGTCTTT+TGG | 0.257327 | 2:+22036807 | None:intergenic |
| TATACTAAGTACCCTATAAT+TGG | 0.264552 | 2:+22036885 | None:intergenic |
| TCATATTTGGATCCAATTAT+AGG | 0.278564 | 2:-22036897 | MsG0280007867.01.T01:CDS |
| CATATTTGGATCCAATTATA+GGG | 0.326287 | 2:-22036896 | MsG0280007867.01.T01:CDS |
| AATTTGATTAGGCATGTTAA+AGG | 0.330111 | 2:-22036582 | MsG0280007867.01.T01:CDS |
| CTATTGAGACTTATATATTT+GGG | 0.343334 | 2:-22036536 | MsG0280007867.01.T01:CDS |
| ATTCGCAAAATTTGTTCTTC+CGG | 0.345878 | 2:-22037054 | MsG0280007867.01.T01:CDS |
| GCAATTGATAATACTGGAAT+TGG | 0.351863 | 2:-22036693 | MsG0280007867.01.T01:CDS |
| TCACAAGCAGGTGCTCAAAT+AGG | 0.357040 | 2:-22037380 | MsG0280007867.01.T01:CDS |
| GAGTAAATATTTGCAAATAA+AGG | 0.360502 | 2:+22036852 | None:intergenic |
| GCTATTGACATGACCATGAT+AGG | 0.381065 | 2:-22036966 | MsG0280007867.01.T01:CDS |
| CATGCTGCAATTGATAATAC+TGG | 0.383359 | 2:-22036699 | MsG0280007867.01.T01:CDS |
| TTTATCTTGATAATTTGATT+AGG | 0.386954 | 2:-22036593 | MsG0280007867.01.T01:CDS |
| GCTTCAAGAGCAGCTTGGTT+TGG | 0.388792 | 2:+22037260 | None:intergenic |
| AATTGAGAATTGCCACCAAC+TGG | 0.394770 | 2:+22037074 | None:intergenic |
| TTCTCCAAATGTTGTAGTTA+GGG | 0.406751 | 2:-22036772 | MsG0280007867.01.T01:CDS |
| CCATCCCTAACTACAACATT+TGG | 0.407887 | 2:+22036768 | None:intergenic |
| ACAAAGACATTGCAAATCAA+TGG | 0.408391 | 2:-22037169 | MsG0280007867.01.T01:CDS |
| TTGATTTGCAATGTCTTTGT+TGG | 0.409434 | 2:+22037172 | None:intergenic |
| CCAAATATATAAGTCTCAAT+AGG | 0.425263 | 2:+22036537 | None:intergenic |
| GCTCAAATAGGTGTTTGTTA+TGG | 0.437286 | 2:-22037368 | MsG0280007867.01.T01:CDS |
| CCAAAATGTTTCTCCAACTC+AGG | 0.437816 | 2:+22036489 | None:intergenic |
| ACTTCGTATCCGCCGTCTAA+AGG | 0.439251 | 2:-22036942 | MsG0280007867.01.T01:CDS |
| CATGTTCCCTAAAATTCAAA+TGG | 0.442173 | 2:+22036432 | None:intergenic |
| TTCACGTTGTGATGGTAGAT+TGG | 0.447086 | 2:+22037334 | None:intergenic |
| TTGTAGTTAGGGATGGTTCA+AGG | 0.447329 | 2:-22036761 | MsG0280007867.01.T01:CDS |
| AAATCTTCACGATCAAATCA+AGG | 0.476242 | 2:-22036997 | MsG0280007867.01.T01:CDS |
| AATGTTGTTGTGTCTGAAAG+TGG | 0.484675 | 2:-22036663 | MsG0280007867.01.T01:CDS |
| CAAAGACATTGCAAATCAAT+GGG | 0.489896 | 2:-22037168 | MsG0280007867.01.T01:CDS |
| TCTGGCATAGAGCTTATGTT+AGG | 0.490580 | 2:-22037227 | MsG0280007867.01.T01:CDS |
| TGTAGTTAGGGATGGTTCAA+GGG | 0.509069 | 2:-22036760 | MsG0280007867.01.T01:CDS |
| TGATTAGGCATGTTAAAGGT+GGG | 0.513293 | 2:-22036578 | MsG0280007867.01.T01:CDS |
| GGTGGGACACCAATGAGGTC+TGG | 0.514579 | 2:-22036561 | MsG0280007867.01.T01:CDS |
| CCAAATGTTGTAGTTAGGGA+TGG | 0.514884 | 2:-22036768 | MsG0280007867.01.T01:CDS |
| CTTGAAGCACTTAGAAACTC+TGG | 0.524132 | 2:-22037245 | MsG0280007867.01.T01:CDS |
| AATAGGTGTTTGTTATGGCA+TGG | 0.529222 | 2:-22037363 | MsG0280007867.01.T01:CDS |
| GGTGTTTGTTATGGCATGGA+AGG | 0.540427 | 2:-22037359 | MsG0280007867.01.T01:CDS |
| TCAATAGGTCCAGACCTCAT+TGG | 0.541707 | 2:+22036552 | None:intergenic |
| TTGATTAGGCATGTTAAAGG+TGG | 0.546182 | 2:-22036579 | MsG0280007867.01.T01:CDS |
| AACGAAGTTAATCCAGTTGG+TGG | 0.557119 | 2:-22037086 | MsG0280007867.01.T01:CDS |
| CAAACAACATCCAAAGAATG+AGG | 0.557727 | 2:-22037292 | MsG0280007867.01.T01:CDS |
| TCTATTGCTTCACGTTGTGA+TGG | 0.567520 | 2:+22037326 | None:intergenic |
| CGATCAAATCAAGGTTTCAA+CGG | 0.570099 | 2:-22036988 | MsG0280007867.01.T01:CDS |
| CGGATACGAAGTTCCTATCA+TGG | 0.570657 | 2:+22036953 | None:intergenic |
| GAAAGTGGTTGGCCTTCAGA+TGG | 0.571089 | 2:-22036648 | MsG0280007867.01.T01:CDS |
| AGTGGTTGGCCTTCAGATGG+TGG | 0.591010 | 2:-22036645 | MsG0280007867.01.T01:CDS |
| GAATAAGAAGAATCCTGAGT+TGG | 0.594707 | 2:-22036502 | MsG0280007867.01.T01:CDS |
| TTGTTGTGTCTGAAAGTGGT+TGG | 0.596272 | 2:-22036659 | MsG0280007867.01.T01:CDS |
| GTAGTTAGGGATGGTTCAAG+GGG | 0.619346 | 2:-22036759 | MsG0280007867.01.T01:CDS |
| TAAGTGCTTCAAGAGCAGCT+TGG | 0.628533 | 2:+22037255 | None:intergenic |
| AAAATCAAATACATCGCGGT+CGG | 0.638139 | 2:-22037110 | MsG0280007867.01.T01:CDS |
| GTTCATTTAAAAGTGATGTG+AGG | 0.641856 | 2:-22036920 | MsG0280007867.01.T01:CDS |
| GGTAACGAAGTTAATCCAGT+TGG | 0.642015 | 2:-22037089 | MsG0280007867.01.T01:CDS |
| GTTGCAAATCCACCATCTGA+AGG | 0.643788 | 2:+22036636 | None:intergenic |
| TTAAATGAACCTTTAGACGG+CGG | 0.669154 | 2:+22036933 | None:intergenic |
| TTAAAGGTGGGACACCAATG+AGG | 0.687393 | 2:-22036566 | MsG0280007867.01.T01:CDS |
| TGTCAAAATCAAATACATCG+CGG | 0.787139 | 2:-22037114 | MsG0280007867.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTATTTGATGCTTTAT+TGG | - | Chr2:22037132-22037151 | MsG0280007867.01.T01:CDS | 15.0% |
| !!! | ATAAAGCATCAAATAAATTT+TGG | + | Chr2:22037132-22037151 | None:intergenic | 15.0% |
| !!! | TTTATCTTGATAATTTGATT+AGG | - | Chr2:22037269-22037288 | MsG0280007867.01.T01:CDS | 15.0% |
| !! | CTATTGAGACTTATATATTT+GGG | - | Chr2:22037326-22037345 | MsG0280007867.01.T01:CDS | 20.0% |
| !! | GAGTAAATATTTGCAAATAA+AGG | + | Chr2:22037013-22037032 | None:intergenic | 20.0% |
| !!! | TACTTTTTCTGTTTGTTATT+AGG | + | Chr2:22037409-22037428 | None:intergenic | 20.0% |
| !!! | TGATATATATTTTGAATTGC+CGG | + | Chr2:22036830-22036849 | None:intergenic | 20.0% |
| ! | AATTTGATTAGGCATGTTAA+AGG | - | Chr2:22037280-22037299 | MsG0280007867.01.T01:CDS | 25.0% |
| ! | CATATTTGGATCCAATTATA+GGG | - | Chr2:22036966-22036985 | MsG0280007867.01.T01:CDS | 25.0% |
| ! | CCAAATATATAAGTCTCAAT+AGG | + | Chr2:22037328-22037347 | None:intergenic | 25.0% |
| ! | CCTATTGAGACTTATATATT+TGG | - | Chr2:22037325-22037344 | MsG0280007867.01.T01:CDS | 25.0% |
| ! | TATACTAAGTACCCTATAAT+TGG | + | Chr2:22036980-22036999 | None:intergenic | 25.0% |
| ! | TCATATTTGGATCCAATTAT+AGG | - | Chr2:22036965-22036984 | MsG0280007867.01.T01:CDS | 25.0% |
| !! | CTTTTAAATGAACCTTTAGA+CGG | + | Chr2:22036935-22036954 | None:intergenic | 25.0% |
| !!! | ATGTATTTGATTTTGACACT+AGG | + | Chr2:22036746-22036765 | None:intergenic | 25.0% |
| !!! | TGTATTTGATTTTGACACTA+GGG | + | Chr2:22036745-22036764 | None:intergenic | 25.0% |
| AAATCTTCACGATCAAATCA+AGG | - | Chr2:22036865-22036884 | MsG0280007867.01.T01:CDS | 30.0% | |
| ACAAAGACATTGCAAATCAA+TGG | - | Chr2:22036693-22036712 | MsG0280007867.01.T01:CDS | 30.0% | |
| CAAAGACATTGCAAATCAAT+GGG | - | Chr2:22036694-22036713 | MsG0280007867.01.T01:CDS | 30.0% | |
| GTTCATTTAAAAGTGATGTG+AGG | - | Chr2:22036942-22036961 | MsG0280007867.01.T01:CDS | 30.0% | |
| TGTCAAAATCAAATACATCG+CGG | - | Chr2:22036748-22036767 | MsG0280007867.01.T01:CDS | 30.0% | |
| TTCTCCAAATGTTGTAGTTA+GGG | - | Chr2:22037090-22037109 | MsG0280007867.01.T01:CDS | 30.0% | |
| ! | ATTCGCAAAATTTGTTCTTC+CGG | - | Chr2:22036808-22036827 | MsG0280007867.01.T01:CDS | 30.0% |
| ! | ATTGAAGTGAGATGTCTTTT+GGG | + | Chr2:22037057-22037076 | None:intergenic | 30.0% |
| ! | CATATAATGTTTTCACAAGC+AGG | - | Chr2:22036470-22036489 | MsG0280007867.01.T01:CDS | 30.0% |
| ! | GCAATTGATAATACTGGAAT+TGG | - | Chr2:22037169-22037188 | MsG0280007867.01.T01:CDS | 30.0% |
| ! | TATTGAAGTGAGATGTCTTT+TGG | + | Chr2:22037058-22037077 | None:intergenic | 30.0% |
| !! | TTGATTTGCAATGTCTTTGT+TGG | + | Chr2:22036693-22036712 | None:intergenic | 30.0% |
| !!! | TAGCAATGTTTTGAAGATCT+GGG | + | Chr2:22036670-22036689 | None:intergenic | 30.0% |
| AAAATCAAATACATCGCGGT+CGG | - | Chr2:22036752-22036771 | MsG0280007867.01.T01:CDS | 35.0% | |
| AAGTGATGTGAGGTCATATT+TGG | - | Chr2:22036952-22036971 | MsG0280007867.01.T01:CDS | 35.0% | |
| AATGTTGTTGTGTCTGAAAG+TGG | - | Chr2:22037199-22037218 | MsG0280007867.01.T01:CDS | 35.0% | |
| CAAACAACATCCAAAGAATG+AGG | - | Chr2:22036570-22036589 | MsG0280007867.01.T01:CDS | 35.0% | |
| CGATCAAATCAAGGTTTCAA+CGG | - | Chr2:22036874-22036893 | MsG0280007867.01.T01:CDS | 35.0% | |
| CTTCTCCAAATGTTGTAGTT+AGG | - | Chr2:22037089-22037108 | MsG0280007867.01.T01:CDS | 35.0% | |
| GAATAAGAAGAATCCTGAGT+TGG | - | Chr2:22037360-22037379 | MsG0280007867.01.T01:CDS | 35.0% | |
| GATCATATAGCCTCATTCTT+TGG | + | Chr2:22036583-22036602 | None:intergenic | 35.0% | |
| TGATTAGGCATGTTAAAGGT+GGG | - | Chr2:22037284-22037303 | MsG0280007867.01.T01:CDS | 35.0% | |
| TTAAATGAACCTTTAGACGG+CGG | + | Chr2:22036932-22036951 | None:intergenic | 35.0% | |
| TTGATTAGGCATGTTAAAGG+TGG | - | Chr2:22037283-22037302 | MsG0280007867.01.T01:CDS | 35.0% | |
| ! | CATGCTGCAATTGATAATAC+TGG | - | Chr2:22037163-22037182 | MsG0280007867.01.T01:CDS | 35.0% |
| ! | GCTCAAATAGGTGTTTGTTA+TGG | - | Chr2:22036494-22036513 | MsG0280007867.01.T01:CDS | 35.0% |
| !! | AATAGGTGTTTGTTATGGCA+TGG | - | Chr2:22036499-22036518 | MsG0280007867.01.T01:CDS | 35.0% |
| !!! | ATGTTTTGAAGATCTGGGTT+AGG | + | Chr2:22036665-22036684 | None:intergenic | 35.0% |
| !!! | GTAGCAATGTTTTGAAGATC+TGG | + | Chr2:22036671-22036690 | None:intergenic | 35.0% |
| AACGAAGTTAATCCAGTTGG+TGG | - | Chr2:22036776-22036795 | MsG0280007867.01.T01:CDS | 40.0% | |
| AATTGAGAATTGCCACCAAC+TGG | + | Chr2:22036791-22036810 | None:intergenic | 40.0% | |
| CCAAAATGTTTCTCCAACTC+AGG | + | Chr2:22037376-22037395 | None:intergenic | 40.0% | |
| CCAAATGTTGTAGTTAGGGA+TGG | - | Chr2:22037094-22037113 | MsG0280007867.01.T01:CDS | 40.0% | |
| CCATCCCTAACTACAACATT+TGG | + | Chr2:22037097-22037116 | None:intergenic | 40.0% | |
| GCTATTGACATGACCATGAT+AGG | - | Chr2:22036896-22036915 | MsG0280007867.01.T01:CDS | 40.0% | |
| GGTAACGAAGTTAATCCAGT+TGG | - | Chr2:22036773-22036792 | MsG0280007867.01.T01:CDS | 40.0% | |
| TCTATTGCTTCACGTTGTGA+TGG | + | Chr2:22036539-22036558 | None:intergenic | 40.0% | |
| TCTGGCATAGAGCTTATGTT+AGG | - | Chr2:22036635-22036654 | MsG0280007867.01.T01:CDS | 40.0% | |
| TGTAGTTAGGGATGGTTCAA+GGG | - | Chr2:22037102-22037121 | MsG0280007867.01.T01:CDS | 40.0% | |
| TTCACGTTGTGATGGTAGAT+TGG | + | Chr2:22036531-22036550 | None:intergenic | 40.0% | |
| TTGTAGTTAGGGATGGTTCA+AGG | - | Chr2:22037101-22037120 | MsG0280007867.01.T01:CDS | 40.0% | |
| TTGTTGTGTCTGAAAGTGGT+TGG | - | Chr2:22037203-22037222 | MsG0280007867.01.T01:CDS | 40.0% | |
| ! | CTTGAAGCACTTAGAAACTC+TGG | - | Chr2:22036617-22036636 | MsG0280007867.01.T01:CDS | 40.0% |
| !! | CCTGAGTTGGAGAAACATTT+TGG | - | Chr2:22037373-22037392 | MsG0280007867.01.T01:CDS | 40.0% |
| CGGATACGAAGTTCCTATCA+TGG | + | Chr2:22036912-22036931 | None:intergenic | 45.0% | |
| GTAGTTAGGGATGGTTCAAG+GGG | - | Chr2:22037103-22037122 | MsG0280007867.01.T01:CDS | 45.0% | |
| GTTGCAAATCCACCATCTGA+AGG | + | Chr2:22037229-22037248 | None:intergenic | 45.0% | |
| TAAGTGCTTCAAGAGCAGCT+TGG | + | Chr2:22036610-22036629 | None:intergenic | 45.0% | |
| TCAATAGGTCCAGACCTCAT+TGG | + | Chr2:22037313-22037332 | None:intergenic | 45.0% | |
| TCACAAGCAGGTGCTCAAAT+AGG | - | Chr2:22036482-22036501 | MsG0280007867.01.T01:CDS | 45.0% | |
| TTAAAGGTGGGACACCAATG+AGG | - | Chr2:22037296-22037315 | MsG0280007867.01.T01:CDS | 45.0% | |
| !! | GGTGTTTGTTATGGCATGGA+AGG | - | Chr2:22036503-22036522 | MsG0280007867.01.T01:CDS | 45.0% |
| ACTTCGTATCCGCCGTCTAA+AGG | - | Chr2:22036920-22036939 | MsG0280007867.01.T01:CDS | 50.0% | |
| GCTTCAAGAGCAGCTTGGTT+TGG | + | Chr2:22036605-22036624 | None:intergenic | 50.0% | |
| !! | GAAAGTGGTTGGCCTTCAGA+TGG | - | Chr2:22037214-22037233 | MsG0280007867.01.T01:CDS | 50.0% |
| !! | AGTGGTTGGCCTTCAGATGG+TGG | - | Chr2:22037217-22037236 | MsG0280007867.01.T01:CDS | 55.0% |
| GGTGGGACACCAATGAGGTC+TGG | - | Chr2:22037301-22037320 | MsG0280007867.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 22036440 | 22037444 | 22036440 | ID=MsG0280007867.01;Name=MsG0280007867.01 |
| Chr2 | mRNA | 22036440 | 22037444 | 22036440 | ID=MsG0280007867.01.T01;Parent=MsG0280007867.01;Name=MsG0280007867.01.T01;_AED=0.46;_eAED=0.46;_QI=0|-1|0|1|-1|1|1|0|334 |
| Chr2 | exon | 22036440 | 22037444 | 22036440 | ID=MsG0280007867.01.T01:exon:18235;Parent=MsG0280007867.01.T01 |
| Chr2 | CDS | 22036440 | 22037444 | 22036440 | ID=MsG0280007867.01.T01:cds;Parent=MsG0280007867.01.T01 |
| Gene Sequence |
| Protein sequence |
