Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0119950 | XP_013467935.1 | 98.234 | 906 | 16 | 0 | 1 | 906 | 1 | 906 | 0.0 | 1833 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0119950 | A0A072VJK4 | 98.234 | 906 | 16 | 0 | 1 | 906 | 1 | 906 | 0.0 | 1833 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008250 | Msa0119950 | 0.801778 | 7.668993e-49 | -8.615850e-47 |
| Msa0009800 | Msa0119950 | 0.814301 | 1.652192e-51 | -8.615850e-47 |
| Msa0018870 | Msa0119950 | 0.828967 | 6.696599e-55 | -8.615850e-47 |
| Msa0025690 | Msa0119950 | 0.809998 | 1.433839e-50 | -8.615850e-47 |
| Msa0030400 | Msa0119950 | 0.801377 | 9.265274e-49 | -8.615850e-47 |
| Msa0032450 | Msa0119950 | 0.841339 | 5.046685e-58 | -8.615850e-47 |
| Msa0041780 | Msa0119950 | 0.838040 | 3.641132e-57 | -8.615850e-47 |
| Msa0046360 | Msa0119950 | 0.818680 | 1.727672e-52 | -8.615850e-47 |
| Msa0047470 | Msa0119950 | 0.801341 | 9.426226e-49 | -8.615850e-47 |
| Msa0051600 | Msa0119950 | 0.808314 | 3.290837e-50 | -8.615850e-47 |
| Msa0055530 | Msa0119950 | 0.821323 | 4.292735e-53 | -8.615850e-47 |
| Msa0116950 | Msa0119950 | 0.803896 | 2.800468e-49 | -8.615850e-47 |
| Msa0119950 | Msa0131390 | 0.806879 | 6.638717e-50 | -8.615850e-47 |
| Msa0119950 | Msa0147990 | 0.808550 | 2.931281e-50 | -8.615850e-47 |
| Msa0119950 | Msa0163300 | 0.885867 | 5.614601e-72 | -8.615850e-47 |
| Msa0119950 | Msa0173760 | 0.807151 | 5.815367e-50 | -8.615850e-47 |
| Msa0119950 | Msa0175530 | 0.818966 | 1.487721e-52 | -8.615850e-47 |
| Msa0119950 | Msa0176710 | 0.829774 | 4.263887e-55 | -8.615850e-47 |
| Msa0119950 | Msa0177490 | 0.804334 | 2.271189e-49 | -8.615850e-47 |
| Msa0119950 | Msa0185950 | 0.802382 | 5.760058e-49 | -8.615850e-47 |
| Msa0119950 | Msa0190840 | 0.840025 | 1.114614e-57 | -8.615850e-47 |
| Msa0119950 | Msa0226800 | 0.821158 | 4.684000e-53 | -8.615850e-47 |
| Msa0119950 | Msa0288220 | 0.843631 | 1.244403e-58 | -8.615850e-47 |
| Msa0119950 | Msa0290600 | 0.836516 | 8.937831e-57 | -8.615850e-47 |
| Msa0119950 | Msa0292150 | 0.810089 | 1.370781e-50 | -8.615850e-47 |
| Msa0119950 | Msa0365150 | 0.817430 | 3.310641e-52 | -8.615850e-47 |
| Msa0119950 | Msa0417150 | 0.802365 | 5.808429e-49 | -8.615850e-47 |
| Msa0119950 | Msa0421100 | 0.839347 | 1.672682e-57 | -8.615850e-47 |
| Msa0119950 | Msa0467080 | 0.802169 | 6.372285e-49 | -8.615850e-47 |
| Msa0119950 | Msa0469270 | 0.857442 | 1.627697e-62 | -8.615850e-47 |
| Msa0119950 | Msa0528740 | 0.806273 | 8.912280e-50 | -8.615850e-47 |
| Msa0119950 | Msa0534380 | 0.809639 | 1.712797e-50 | -8.615850e-47 |
| Msa0119950 | Msa0548710 | 0.800230 | 1.588832e-48 | -8.615850e-47 |
| Msa0119950 | Msa0554170 | 0.806744 | 7.089536e-50 | -8.615850e-47 |
| Msa0119950 | Msa0558890 | 0.805463 | 1.318834e-49 | -8.615850e-47 |
| Msa0119950 | Msa0568490 | 0.851475 | 8.664907e-61 | -8.615850e-47 |
| Msa0119950 | Msa0571250 | 0.819618 | 1.056707e-52 | -8.615850e-47 |
| Msa0119950 | Msa0573300 | 0.819570 | 1.083492e-52 | -8.615850e-47 |
| Msa0119950 | Msa0573970 | 0.822791 | 1.961175e-53 | -8.615850e-47 |
| Msa0119950 | Msa0575450 | 0.811963 | 5.382531e-51 | -8.615850e-47 |
| Msa0119950 | Msa0606200 | 0.826551 | 2.549116e-54 | -8.615850e-47 |
| Msa0119950 | Msa0633720 | 0.807826 | 4.181568e-50 | -8.615850e-47 |
| Msa0119950 | Msa0650360 | 0.810073 | 1.381960e-50 | -8.615850e-47 |
| Msa0119950 | Msa0668160 | 0.822613 | 2.156951e-53 | -8.615850e-47 |
| Msa0119950 | Msa0685880 | 0.821568 | 3.768451e-53 | -8.615850e-47 |
| Msa0119950 | Msa0734760 | 0.817525 | 3.151423e-52 | -8.615850e-47 |
| Msa0119950 | Msa0776290 | 0.877277 | 7.146663e-69 | -8.615850e-47 |
| Msa0119950 | Msa0804340 | 0.850442 | 1.693489e-60 | -8.615850e-47 |
| Msa0119950 | Msa0807950 | 0.807106 | 5.943454e-50 | -8.615850e-47 |
| Msa0119950 | Msa0842270 | 0.838700 | 2.461540e-57 | -8.615850e-47 |
| Msa0119950 | Msa0861480 | 0.808050 | 3.746733e-50 | -8.615850e-47 |
| Msa0119950 | Msa0861560 | 0.830779 | 2.422661e-55 | -8.615850e-47 |
| Msa0119950 | Msa0868040 | 0.800447 | 1.435402e-48 | -8.615850e-47 |
| Msa0119950 | Msa0899700 | 0.834836 | 2.380859e-56 | -8.615850e-47 |
| Msa0119950 | Msa0934830 | 0.809061 | 2.278875e-50 | -8.615850e-47 |
| Msa0119950 | Msa0964680 | 0.816790 | 4.611664e-52 | -8.615850e-47 |
| Msa0119950 | Msa1016130 | 0.836529 | 8.872705e-57 | -8.615850e-47 |
| Msa0119950 | Msa1028720 | 0.869676 | 2.589325e-66 | -8.615850e-47 |
| Msa0119950 | Msa1028780 | 0.821379 | 4.166650e-53 | -8.615850e-47 |
| Msa0119950 | Msa1067710 | 0.843509 | 1.341572e-58 | -8.615850e-47 |
| Msa0119950 | Msa1071310 | 0.803453 | 3.461237e-49 | -8.615850e-47 |
| Msa0119950 | Msa1120370 | 0.823328 | 1.469231e-53 | -8.615850e-47 |
| Msa0119950 | Msa1130650 | 0.805688 | 1.182753e-49 | -8.615850e-47 |
| Msa0119950 | Msa1161520 | 0.816505 | 5.343315e-52 | -8.615850e-47 |
| Msa0119950 | Msa1161760 | 0.812424 | 4.269393e-51 | -8.615850e-47 |
| Msa0119950 | Msa1178980 | 0.801722 | 7.872489e-49 | -8.615850e-47 |
| Msa0119950 | Msa1188820 | 0.806773 | 6.990188e-50 | -8.615850e-47 |
| Msa0119950 | Msa1204110 | 0.802225 | 6.206419e-49 | -8.615850e-47 |
| Msa0119950 | Msa1209790 | 0.800542 | 1.372711e-48 | -8.615850e-47 |
| Msa0119950 | Msa1299940 | 0.825715 | 4.030937e-54 | -8.615850e-47 |
| Msa0119950 | Msa1335720 | 0.806036 | 9.995404e-50 | -8.615850e-47 |
| Msa0119950 | Msa1395640 | 0.844418 | 7.654073e-59 | -8.615850e-47 |
| Msa0119950 | Msa1403900 | 0.805327 | 1.408335e-49 | -8.615850e-47 |
| Msa0119950 | Msa1408190 | 0.800314 | 1.527679e-48 | -8.615850e-47 |
| Msa0119950 | Msa1413220 | 0.804147 | 2.483788e-49 | -8.615850e-47 |
| Msa0119950 | Msa1428440 | 0.822888 | 1.861037e-53 | -8.615850e-47 |
| Msa0119950 | Msa1440180 | 0.813799 | 2.131325e-51 | -8.615850e-47 |
| Msa0119950 | Msa1448990 | 0.801671 | 8.064488e-49 | -8.615850e-47 |
| Msa0119950 | Msa1449740 | 0.811637 | 6.337750e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0119950 | MtrunA17_Chr1g0178091 | 98.234 | 906 | 16 | 0 | 1 | 906 | 1 | 906 | 0.0 | 1833 |
| Msa0119950 | MtrunA17_Chr7g0266791 | 65.752 | 911 | 275 | 10 | 1 | 905 | 1 | 880 | 0.0 | 1127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0119950 | AT3G11560.3 | 59.140 | 837 | 312 | 8 | 58 | 889 | 45 | 856 | 0.0 | 981 |
| Msa0119950 | AT3G11560.2 | 59.140 | 837 | 312 | 8 | 58 | 889 | 45 | 856 | 0.0 | 981 |
| Msa0119950 | AT3G11560.4 | 59.140 | 837 | 312 | 8 | 58 | 889 | 45 | 856 | 0.0 | 981 |
| Msa0119950 | AT5G06220.3 | 55.373 | 912 | 366 | 15 | 1 | 903 | 1 | 880 | 0.0 | 938 |
| Msa0119950 | AT5G06220.2 | 53.698 | 933 | 374 | 16 | 1 | 903 | 1 | 905 | 0.0 | 910 |
| Msa0119950 | AT5G06220.1 | 51.595 | 909 | 353 | 15 | 1 | 903 | 1 | 828 | 0.0 | 832 |
| Msa0119950 | AT3G11560.1 | 60.377 | 583 | 208 | 5 | 58 | 635 | 45 | 609 | 0.0 | 716 |
| Msa0119950 | AT3G11560.5 | 60.377 | 583 | 208 | 5 | 58 | 635 | 45 | 609 | 0.0 | 716 |
Find 256 sgRNAs with CRISPR-Local
Find 971 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCTGCGTTCTTCGCTTTC+TGG | 0.066218 | 1_3:-44470660 | Msa0119950:three_prime_UTR |
| AGGTTCCGGGTCGGGCTTTC+TGG | 0.093751 | 1_3:+44474457 | None:intergenic |
| CATTTGCTGTTTGCTCTTAT+TGG | 0.123771 | 1_3:-44477663 | Msa0119950:CDS |
| CATCCTTTCAAAAGTATATT+TGG | 0.146338 | 1_3:+44470276 | Msa0119940:intron |
| GAGAAGGATTTGGCTATATT+TGG | 0.149892 | 1_3:-44478331 | Msa0119950:CDS |
| ATTGCCTACTATTTAGTAAA+TGG | 0.157021 | 1_3:-44482837 | Msa0119950:CDS |
| GAATTATAAGCTTGACTTAC+AGG | 0.172414 | 1_3:+44479129 | None:intergenic |
| CTCAAGAGATCCAACCTTTC+TGG | 0.181342 | 1_3:+44470832 | None:intergenic |
| CTTCCTGGTCTGATGAAAAT+TGG | 0.184892 | 1_3:-44470685 | Msa0119950:three_prime_UTR |
| CCTTAACGGAAGAAAATTAT+TGG | 0.191136 | 1_3:+44485186 | None:intergenic |
| GTTTAAACTTCCTCAAATTC+TGG | 0.222075 | 1_3:-44469975 | Msa0119950:three_prime_UTR |
| TTTATTACAGGTATCTTATT+GGG | 0.237944 | 1_3:-44477947 | Msa0119950:intron |
| ATTTATTACAGGTATCTTAT+TGG | 0.238493 | 1_3:-44477948 | Msa0119950:intron |
| TGGGTCACTGCTTCTGCATT+TGG | 0.242483 | 1_3:+44477688 | None:intergenic |
| TCTGCATTTGGAGGACCTTC+TGG | 0.248549 | 1_3:+44477700 | None:intergenic |
| AGAGAATTTCTTGTACATTT+TGG | 0.251325 | 1_3:-44479084 | Msa0119950:CDS |
| GGTTCCTGGTTCCCGATATT+TGG | 0.265711 | 1_3:-44470520 | Msa0119950:three_prime_UTR |
| GAAGGATTTCATTGGGTTCT+TGG | 0.270749 | 1_3:+44473004 | None:intergenic |
| TGTGACTGTTTGAGAGCTTA+TGG | 0.275671 | 1_3:-44470157 | Msa0119950:three_prime_UTR |
| GGAGCATCGGGTGGGGTTCC+TGG | 0.280362 | 1_3:-44470534 | Msa0119950:three_prime_UTR |
| TTTGGATTCTTTATTGCTTT+AGG | 0.283500 | 1_3:-44478313 | Msa0119950:CDS |
| TTGGAAAATCTCGTGGATTC+TGG | 0.286568 | 1_3:-44474502 | Msa0119950:CDS |
| ATCCACGTGATGACGATTTA+TGG | 0.292434 | 1_3:+44482512 | None:intergenic |
| CAACTCCTCTCTAAGAAATA+TGG | 0.312711 | 1_3:+44470621 | Msa0119940:CDS |
| CTGATTGATAGGCACTTCTT+TGG | 0.322607 | 1_3:+44472935 | None:intergenic |
| AGTCAATTCATCACCTATTA+AGG | 0.322844 | 1_3:+44472027 | None:intergenic |
| GGTTCCGGGTCGGGCTTTCT+GGG | 0.326767 | 1_3:+44474458 | None:intergenic |
| AAGACAAATCATGTTGTATA+AGG | 0.329353 | 1_3:+44482794 | None:intergenic |
| TTGCCTACTATTTAGTAAAT+GGG | 0.337487 | 1_3:-44482836 | Msa0119950:CDS |
| TTTGTTAGCTATACATAAAT+CGG | 0.341761 | 1_3:+44470718 | None:intergenic |
| TAAGAAAGAAGCTGAATTCC+TGG | 0.342804 | 1_3:-44475850 | Msa0119950:CDS |
| TTTGAACATCACATATCTTT+CGG | 0.342805 | 1_3:+44470473 | Msa0119940:CDS |
| TCCATGAGCACTGAGATAAC+TGG | 0.352935 | 1_3:-44479183 | Msa0119950:CDS |
| CTGAAGTGTACGAATGGTTT+TGG | 0.355223 | 1_3:-44479525 | Msa0119950:CDS |
| CTCAAAGCGAAGGATTTCAT+TGG | 0.379425 | 1_3:+44472996 | None:intergenic |
| GGGTCGGGCTTTCTGGGTAT+AGG | 0.385827 | 1_3:+44474464 | None:intergenic |
| TCAAGCTTATAATTCTATAA+AGG | 0.386303 | 1_3:-44479121 | Msa0119950:CDS |
| TTGGTCAAAAGGACCTTAAT+AGG | 0.388491 | 1_3:-44472040 | Msa0119950:CDS |
| ATACAATTGATATGAACTAA+TGG | 0.391551 | 1_3:+44477893 | None:intergenic |
| ACAAAACTTAACATTCTTCC+TGG | 0.391665 | 1_3:-44470700 | Msa0119950:three_prime_UTR |
| TGGTCCACAACCCCTACATT+TGG | 0.398293 | 1_3:+44473024 | None:intergenic |
| TGAGCATCCACATCAGGTTC+CGG | 0.399986 | 1_3:+44474443 | None:intergenic |
| TGTTAGGCACAACAAGTTGA+TGG | 0.400862 | 1_3:-44477484 | Msa0119950:intron |
| ATGGTCACCCTTCCAAATAT+CGG | 0.405249 | 1_3:+44470508 | Msa0119940:CDS |
| AAGTACACGAACATTTCTTT+TGG | 0.405597 | 1_3:-44478287 | Msa0119950:CDS |
| TTTGTGATGCTGGTGATTCC+CGG | 0.407876 | 1_3:+44477745 | None:intergenic |
| TCCACATCAGGTTCCGGGTC+GGG | 0.407937 | 1_3:+44474449 | None:intergenic |
| CTGCCTCGGGTTTGGTCAAA+AGG | 0.408786 | 1_3:-44472051 | Msa0119950:CDS |
| TGAGATAACTGGTAGTTTGA+TGG | 0.414550 | 1_3:-44479172 | Msa0119950:CDS |
| GTCACTGCTTCTGCATTTGG+AGG | 0.415112 | 1_3:+44477691 | None:intergenic |
| AACTGAAGCCATGTCAGTTA+AGG | 0.424587 | 1_3:+44471976 | None:intergenic |
| CATGTGTCAAGCTCTAGTTC+TGG | 0.429376 | 1_3:-44475924 | Msa0119950:CDS |
| TATTGATGTTGGTGCTGCCT+CGG | 0.429403 | 1_3:-44472065 | Msa0119950:CDS |
| TTCGTACACTTCAGGCTGTT+TGG | 0.429694 | 1_3:+44479534 | None:intergenic |
| CTGGTGATTCCCGGATAAAA+AGG | 0.430228 | 1_3:+44477754 | None:intergenic |
| CACCGGTTGGTGAGGAGGAC+AGG | 0.430373 | 1_3:-44474708 | Msa0119950:CDS |
| TTTGAAAGGATGACTAAAAT+GGG | 0.431093 | 1_3:-44470265 | Msa0119950:three_prime_UTR |
| TTTGACAAACTAAAAGAAAC+GGG | 0.431505 | 1_3:-44472364 | Msa0119950:CDS |
| ATGCCTTCACCCATGCGGTT+TGG | 0.433558 | 1_3:+44482458 | None:intergenic |
| TGTTGGTGCTGCCTCGGGTT+TGG | 0.433951 | 1_3:-44472059 | Msa0119950:CDS |
| AGCTGATGGAACTTGAGAAA+AGG | 0.434158 | 1_3:-44472960 | Msa0119950:CDS |
| AACCCCACCCGATGCTCCTC+AGG | 0.434501 | 1_3:+44470539 | Msa0119940:CDS |
| TTCACACAGGTTACTGCCGT+TGG | 0.436149 | 1_3:-44471028 | Msa0119950:intron |
| CATATTTCTTAGAGAGGAGT+TGG | 0.437810 | 1_3:-44470620 | Msa0119950:three_prime_UTR |
| ATAAGTTCATTCCACGTGTC+TGG | 0.438600 | 1_3:-44470591 | Msa0119950:three_prime_UTR |
| GAGCATCCACATCAGGTTCC+GGG | 0.438761 | 1_3:+44474444 | None:intergenic |
| CTCCAGCATCACCGTTATAA+CGG | 0.441709 | 1_3:+44472437 | None:intergenic |
| AAATCTTCAATTGGATCATC+GGG | 0.443539 | 1_3:+44478247 | None:intergenic |
| ATTGATGTTGGTGCTGCCTC+GGG | 0.446845 | 1_3:-44472064 | Msa0119950:CDS |
| CAACCTTTCTGGTGCATAAG+TGG | 0.447890 | 1_3:+44470843 | None:intergenic |
| GAGAAATGGATTTACCTTAA+CGG | 0.448654 | 1_3:+44485172 | None:intergenic |
| CAAAACCATTCGTACACTTC+AGG | 0.449478 | 1_3:+44479526 | None:intergenic |
| TCCTTTGTTAATAAGTTTGA+AGG | 0.449982 | 1_3:-44479475 | Msa0119950:CDS |
| TCCAGCATCACCGTTATAAC+GGG | 0.453068 | 1_3:+44472438 | None:intergenic |
| TCACATATCTTTCGGAATTG+AGG | 0.454039 | 1_3:+44470481 | Msa0119940:CDS |
| AAGAGCAAACAGCAAATGCT+TGG | 0.455991 | 1_3:+44477668 | None:intergenic |
| GAAATCTTCAATTGGATCAT+CGG | 0.456727 | 1_3:+44478246 | None:intergenic |
| CACTTATGCACCAGAAAGGT+TGG | 0.457686 | 1_3:-44470842 | Msa0119950:CDS |
| TTCTATCTCTGCTATCATCT+CGG | 0.457753 | 1_3:+44480191 | None:intergenic |
| CAACTTCTTGCTATTGATGT+TGG | 0.459877 | 1_3:-44472076 | Msa0119950:CDS |
| TGTAGATTCAGATGATGAAA+TGG | 0.461113 | 1_3:-44470767 | Msa0119950:CDS |
| ATCCAATTGAAGATTTCATC+AGG | 0.465735 | 1_3:-44478240 | Msa0119950:intron |
| GCTAAGGCTATCTGCTCCCT+TGG | 0.466582 | 1_3:-44479584 | Msa0119950:CDS |
| GAAAGCAGCCTGTTCTGACT+TGG | 0.466824 | 1_3:-44475889 | Msa0119950:CDS |
| TCACACAGGTTACTGCCGTT+GGG | 0.466862 | 1_3:-44471027 | Msa0119950:intron |
| ATGGATGGAGTTAAATGATC+AGG | 0.467748 | 1_3:-44470748 | Msa0119950:exon |
| ATTCGAAAGGCAGCAATTTG+AGG | 0.467776 | 1_3:+44482897 | None:intergenic |
| ACCAGTTATCTCAGTGCTCA+TGG | 0.469402 | 1_3:+44479182 | None:intergenic |
| CCATTTGCTACCTCTGATGA+TGG | 0.469525 | 1_3:-44482691 | Msa0119950:CDS |
| GTTAATAAGTTTGAAGGGGA+CGG | 0.473421 | 1_3:-44479469 | Msa0119950:CDS |
| ACAAAGGACGTCACTACAGC+TGG | 0.474919 | 1_3:+44479490 | None:intergenic |
| AACCTGTCCTCCTCACCAAC+CGG | 0.476504 | 1_3:+44474706 | None:intergenic |
| GGTTCAGAAGCAGCTGCAGC+AGG | 0.477118 | 1_3:-44478992 | Msa0119950:CDS |
| CTTTCGGAATTGAGGAAAGA+TGG | 0.477482 | 1_3:+44470489 | Msa0119940:CDS |
| TCAAAGCGAAGGATTTCATT+GGG | 0.478454 | 1_3:+44472997 | None:intergenic |
| CTACAATCCTGAGGAGCATC+GGG | 0.479635 | 1_3:-44470546 | Msa0119950:three_prime_UTR |
| AACAGCCTGCACCAAATGTA+GGG | 0.479756 | 1_3:-44473035 | Msa0119950:CDS |
| ATTCCACGTGTCTGGCACTC+CGG | 0.480121 | 1_3:-44470583 | Msa0119950:three_prime_UTR |
| TACCTGATGAAATCTTCAAT+TGG | 0.481210 | 1_3:+44478238 | None:intergenic |
| GATATAAATACGTTGTAATA+CGG | 0.481799 | 1_3:-44470405 | Msa0119950:three_prime_UTR |
| AATCGTCATCACGTGGATCC+TGG | 0.482075 | 1_3:-44482507 | Msa0119950:CDS |
| CCATCATCAGAGGTAGCAAA+TGG | 0.483136 | 1_3:+44482691 | None:intergenic |
| GCCCGTTATAACGGTGATGC+TGG | 0.483322 | 1_3:-44472439 | Msa0119950:CDS |
| ATTGCTGCAATTGCTAAACT+TGG | 0.487614 | 1_3:-44479237 | Msa0119950:CDS |
| GTTGTAAAAGAGATGCAATA+TGG | 0.488049 | 1_3:+44470432 | Msa0119940:CDS |
| TCTATCTCTGCTATCATCTC+GGG | 0.488428 | 1_3:+44480192 | None:intergenic |
| TGCACCAAATGTAGGGGTTG+TGG | 0.488543 | 1_3:-44473028 | Msa0119950:CDS |
| AAGAGATGCAATATGGAAGC+TGG | 0.489238 | 1_3:+44470439 | Msa0119940:CDS |
| TAAATGGGGCAGTTCAAGAA+AGG | 0.492643 | 1_3:-44482821 | Msa0119950:CDS |
| TTTCTTCTTCATCCGTTACA+TGG | 0.494088 | 1_3:-44485227 | Msa0119950:exon |
| TGCAATTGCTAAACTTGGCC+CGG | 0.494454 | 1_3:-44479232 | Msa0119950:CDS |
| CCTGGTTCCCGATATTTGGA+AGG | 0.494657 | 1_3:-44470516 | Msa0119950:three_prime_UTR |
| GCTGATGGAACTTGAGAAAA+GGG | 0.494748 | 1_3:-44472959 | Msa0119950:CDS |
| TGGTCACCCTTCCAAATATC+GGG | 0.496935 | 1_3:+44470509 | Msa0119940:CDS |
| ATCATCTGAATCTACATCAC+TGG | 0.500007 | 1_3:+44470774 | None:intergenic |
| TAAAGGTGGACAGGAGCAAA+AGG | 0.500329 | 1_3:-44474651 | Msa0119950:intron |
| TCGAATGGTTCCTCTAGTGT+AGG | 0.500669 | 1_3:-44482880 | Msa0119950:CDS |
| TAGTTTGTGAAGAGCTGGAT+TGG | 0.501881 | 1_3:-44477780 | Msa0119950:CDS |
| AAGCTTTATATGATGCAGCC+AGG | 0.502582 | 1_3:-44482558 | Msa0119950:CDS |
| ATGGAGTGCATGGATGAACT+TGG | 0.503782 | 1_3:-44477465 | Msa0119950:CDS |
| TGCCCCATTTACTAAATAGT+AGG | 0.504706 | 1_3:+44482833 | None:intergenic |
| AGGAGGACAGGTTTATGAAA+GGG | 0.505159 | 1_3:-44474696 | Msa0119950:CDS |
| TTAATAAGTTTGAAGGGGAC+GGG | 0.506571 | 1_3:-44479468 | Msa0119950:CDS |
| TTGTCTTTGAGCAGTGGTCA+AGG | 0.509178 | 1_3:-44482778 | Msa0119950:CDS |
| CATACATGAGCATCCACATC+AGG | 0.511008 | 1_3:+44474437 | None:intergenic |
| CTCCTCAGGATTGTAGCCAC+TGG | 0.511858 | 1_3:+44470553 | Msa0119940:CDS |
| GCTGCAGCAGGCTATTGATA+AGG | 0.512317 | 1_3:-44478980 | Msa0119950:CDS |
| TTCCACGTGTCTGGCACTCC+GGG | 0.514233 | 1_3:-44470582 | Msa0119950:three_prime_UTR |
| TTCATATCAATTGTATGTTG+AGG | 0.514605 | 1_3:-44477886 | Msa0119950:intron |
| GCAGAGAATCAGCCTTTGCT+CGG | 0.515186 | 1_3:+44475817 | None:intergenic |
| CTCCTCACCAACCGGTGTGA+TGG | 0.515931 | 1_3:+44474714 | None:intergenic |
| CGTTGGGCATGCAGCAATGT+TGG | 0.517058 | 1_3:-44471011 | Msa0119950:CDS |
| TTAGCACTGGCGTCAGCTTG+TGG | 0.517278 | 1_3:+44482649 | None:intergenic |
| CGAATGGTTCCTCTAGTGTA+GGG | 0.518510 | 1_3:-44482879 | Msa0119950:CDS |
| TCAAATTGCTGCCTTTCGAA+TGG | 0.520137 | 1_3:-44482895 | Msa0119950:CDS |
| AGTCTGTACAGTGAAATTGC+AGG | 0.520302 | 1_3:+44470304 | Msa0119940:intron |
| GAACAGCCTGCACCAAATGT+AGG | 0.520502 | 1_3:-44473036 | Msa0119950:CDS |
| TGCATTGGTCCAGTTTGCTA+AGG | 0.521404 | 1_3:-44479600 | Msa0119950:intron |
| CATCCACTTATGCACCAGAA+AGG | 0.521547 | 1_3:-44470846 | Msa0119950:CDS |
| ATATTTCTTAGAGAGGAGTT+GGG | 0.521772 | 1_3:-44470619 | Msa0119950:three_prime_UTR |
| GCTACAATCCTGAGGAGCAT+CGG | 0.523452 | 1_3:-44470547 | Msa0119950:three_prime_UTR |
| CTATTGATAAGGAGAAAATA+TGG | 0.523593 | 1_3:-44478969 | Msa0119950:CDS |
| TTATTACAGGTATCTTATTG+GGG | 0.523663 | 1_3:-44477946 | Msa0119950:intron |
| GAGTGAAATAGAGAAGGAAG+AGG | 0.524441 | 1_3:+44485313 | None:intergenic |
| TTCTCTGATTAAGCTCTCCA+AGG | 0.529124 | 1_3:+44479567 | None:intergenic |
| GGTGAAGGCATTGTCATGTC+AGG | 0.529130 | 1_3:-44482446 | Msa0119950:intron |
| ATGTCAATGTATTTGTTCAA+AGG | 0.529604 | 1_3:-44480168 | Msa0119950:CDS |
| TGTAGCCACTGGTGTTTACC+CGG | 0.530101 | 1_3:+44470564 | Msa0119940:CDS |
| ATGACAATGTAAAGGTGGAC+AGG | 0.530740 | 1_3:-44474660 | Msa0119950:CDS |
| AACTAATGGATGAGAGTTGT+GGG | 0.533106 | 1_3:+44477907 | None:intergenic |
| ATAGGTAGTTTGTGAAGAGC+TGG | 0.533672 | 1_3:-44477785 | Msa0119950:intron |
| ATGGCTTCAGTTGTTCCTAT+CGG | 0.533849 | 1_3:-44471965 | Msa0119950:CDS |
| CAATGCATGTAAGTGCAAGC+AGG | 0.534320 | 1_3:+44479256 | None:intergenic |
| AGACAAATTGGAAAATCTCG+TGG | 0.536140 | 1_3:-44474509 | Msa0119950:CDS |
| TATAATTCTATAAAGGATGT+TGG | 0.536506 | 1_3:-44479114 | Msa0119950:CDS |
| AGGAATGGCACATGGAATGA+AGG | 0.537052 | 1_3:+44470324 | Msa0119940:intron |
| AGAGCAAACAGCAAATGCTT+GGG | 0.537493 | 1_3:+44477669 | None:intergenic |
| CCTTTGTTAATAAGTTTGAA+GGG | 0.539411 | 1_3:-44479474 | Msa0119950:CDS |
| AGAAAAGAGTGAAATAGAGA+AGG | 0.541467 | 1_3:+44485307 | None:intergenic |
| GCCCGACCCGGAACCTGATG+TGG | 0.543249 | 1_3:-44474450 | Msa0119950:CDS |
| CAGAAAGAATGACAATGTAA+AGG | 0.547359 | 1_3:-44474668 | Msa0119950:CDS |
| ATCCACATCAGGTTCCGGGT+CGG | 0.548048 | 1_3:+44474448 | None:intergenic |
| GCTTCTAAGAAATGAGCTGA+TGG | 0.549207 | 1_3:-44472974 | Msa0119950:CDS |
| AGACCAAACCGCATGGGTGA+AGG | 0.550828 | 1_3:-44482461 | Msa0119950:CDS |
| TTGGGGTAGACCAAACCGCA+TGG | 0.552422 | 1_3:-44482468 | Msa0119950:CDS |
| CAACATTGCTGCATGCCCAA+CGG | 0.554350 | 1_3:+44471012 | None:intergenic |
| GGAGGCATCTTTCCGAGCAA+AGG | 0.554648 | 1_3:-44475829 | Msa0119950:CDS |
| GTACAGTGAAATTGCAGGAA+TGG | 0.556759 | 1_3:+44470309 | Msa0119940:intron |
| GATGATGGTGCCCGTTATAA+CGG | 0.557094 | 1_3:-44472448 | Msa0119950:CDS |
| TTGCTCGGAAAGATGCCTCC+AGG | 0.557722 | 1_3:+44475832 | None:intergenic |
| CATGATTTGTCTTTGAGCAG+TGG | 0.558900 | 1_3:-44482784 | Msa0119950:CDS |
| GGGATGCAATCCAGAATTTG+AGG | 0.559998 | 1_3:+44469965 | Msa0119940:intron |
| AAGCCAAGCTGTTGAAAACC+AGG | 0.562530 | 1_3:+44482489 | None:intergenic |
| TTCTTAGAAGCTCAAAGCGA+AGG | 0.563042 | 1_3:+44472986 | None:intergenic |
| ATGCCAAGAAAATAGTTGAC+GGG | 0.563199 | 1_3:-44476271 | Msa0119950:CDS |
| CCTTCCAAATATCGGGAACC+AGG | 0.563273 | 1_3:+44470516 | Msa0119940:CDS |
| GAGGAGGACAGGTTTATGAA+AGG | 0.563646 | 1_3:-44474697 | Msa0119950:CDS |
| CTGGTTCCCGATATTTGGAA+GGG | 0.564236 | 1_3:-44470515 | Msa0119950:three_prime_UTR |
| CTTTCTGGTGCATAAGTGGA+TGG | 0.565207 | 1_3:+44470847 | None:intergenic |
| TCAGAGATATGTACCATCCC+TGG | 0.565736 | 1_3:-44470981 | Msa0119950:intron |
| CGTTGAGTGGGGTTCAGAAG+AGG | 0.568636 | 1_3:-44479034 | Msa0119950:CDS |
| ATCCTGAGGAGCATCGGGTG+GGG | 0.569446 | 1_3:-44470541 | Msa0119950:three_prime_UTR |
| ACAACCCCTACATTTGGTGC+AGG | 0.572458 | 1_3:+44473030 | None:intergenic |
| CATCACACCGGTTGGTGAGG+AGG | 0.575965 | 1_3:-44474713 | Msa0119950:CDS |
| TGATGCCATATTTCTTAGAG+AGG | 0.576119 | 1_3:-44470626 | Msa0119950:three_prime_UTR |
| TGGTAGTTTGATGGACATGC+TGG | 0.577164 | 1_3:-44479163 | Msa0119950:CDS |
| AACCATCACACCGGTTGGTG+AGG | 0.578656 | 1_3:-44474716 | Msa0119950:CDS |
| CCCTTCAAACTTATTAACAA+AGG | 0.580260 | 1_3:+44479474 | None:intergenic |
| GCTCTAAAAGCTGCAGCTCG+AGG | 0.584011 | 1_3:+44479060 | None:intergenic |
| CATAATGTTTATACCAGGGA+TGG | 0.584245 | 1_3:+44470968 | None:intergenic |
| ATGATGGTATGACTGTCAAC+GGG | 0.587846 | 1_3:-44482675 | Msa0119950:CDS |
| GGATGGTACATATCTCTGAA+TGG | 0.588023 | 1_3:+44470985 | None:intergenic |
| CAACAAGTTGATGGAGTGCA+TGG | 0.588754 | 1_3:-44477475 | Msa0119950:CDS |
| AGGTGATGAATTGACTGAGA+AGG | 0.589472 | 1_3:-44472020 | Msa0119950:CDS |
| GAGATTTAACTGCCATGTAA+CGG | 0.592044 | 1_3:+44485215 | None:intergenic |
| TCAATGTATTTGTTCAAAGG+AGG | 0.593230 | 1_3:-44480165 | Msa0119950:intron |
| GATGCCAAGAAAATAGTTGA+CGG | 0.593833 | 1_3:-44476272 | Msa0119950:CDS |
| TCTCTGATTAAGCTCTCCAA+GGG | 0.594955 | 1_3:+44479568 | None:intergenic |
| CAATCCTGAGGAGCATCGGG+TGG | 0.595880 | 1_3:-44470543 | Msa0119950:three_prime_UTR |
| TGGGGTAGACCAAACCGCAT+GGG | 0.599216 | 1_3:-44482467 | Msa0119950:CDS |
| AAAGAATGACAATGTAAAGG+TGG | 0.599299 | 1_3:-44474665 | Msa0119950:CDS |
| AATAAACAGGATGTCTTGCA+AGG | 0.599328 | 1_3:-44472103 | Msa0119950:intron |
| AATCCTGAGGAGCATCGGGT+GGG | 0.600124 | 1_3:-44470542 | Msa0119950:three_prime_UTR |
| AGTTTGATGGACATGCTGGT+TGG | 0.601484 | 1_3:-44479159 | Msa0119950:CDS |
| CAGCTGAATTTCTGTCCAGA+GGG | 0.602473 | 1_3:-44477585 | Msa0119950:intron |
| AAAGAAAACATACAAAGCAA+TGG | 0.602552 | 1_3:+44479432 | None:intergenic |
| AGCTTTATATGATGCAGCCA+GGG | 0.604106 | 1_3:-44482557 | Msa0119950:CDS |
| TCAGTCAACGATAAAAGACT+CGG | 0.604277 | 1_3:-44476234 | Msa0119950:CDS |
| TGCCTACTATTTAGTAAATG+GGG | 0.604581 | 1_3:-44482835 | Msa0119950:CDS |
| CTTTGTTAATAAGTTTGAAG+GGG | 0.606418 | 1_3:-44479473 | Msa0119950:CDS |
| GCTTTATTAAATACAGCACA+TGG | 0.606466 | 1_3:-44477633 | Msa0119950:CDS |
| TAAAAGAACCTTAACTGACA+TGG | 0.607581 | 1_3:-44471984 | Msa0119950:CDS |
| GAACTAATGGATGAGAGTTG+TGG | 0.607614 | 1_3:+44477906 | None:intergenic |
| GAAATTGCAGGAATGGCACA+TGG | 0.608323 | 1_3:+44470316 | Msa0119940:intron |
| AAAATTGAGCCAAAGTCATG+TGG | 0.608768 | 1_3:+44470000 | Msa0119940:intron |
| GTCAAGCTCTAGTTCTGGAA+AGG | 0.610770 | 1_3:-44475919 | Msa0119950:CDS |
| CAGAAAGGTTGGATCTCTTG+AGG | 0.611545 | 1_3:-44470831 | Msa0119950:CDS |
| AAATGGGGCAGTTCAAGAAA+GGG | 0.611700 | 1_3:-44482820 | Msa0119950:CDS |
| AGAAGCATTAAAATGCCGAT+AGG | 0.614251 | 1_3:+44471950 | None:intergenic |
| AGCATCACAAAACAGTCTCA+TGG | 0.618630 | 1_3:-44477733 | Msa0119950:CDS |
| AACAGCCTGAAGTGTACGAA+TGG | 0.620134 | 1_3:-44479531 | Msa0119950:CDS |
| TCGGGCTTTCTGGGTATAGG+AGG | 0.620870 | 1_3:+44474467 | None:intergenic |
| GATTCAGATGATGAAATGGA+TGG | 0.623036 | 1_3:-44470763 | Msa0119950:CDS |
| GATCAAACCATCACACCGGT+TGG | 0.625270 | 1_3:-44474721 | Msa0119950:CDS |
| AAAGGCTGATTCTCTGCAAG+AGG | 0.626235 | 1_3:-44475811 | Msa0119950:intron |
| CAGTCAACGATAAAAGACTC+GGG | 0.627580 | 1_3:-44476233 | Msa0119950:CDS |
| GACAACATCTGAAAGCATTG+AGG | 0.629336 | 1_3:-44478938 | Msa0119950:intron |
| TATACCCAGAAAGCCCGACC+CGG | 0.629720 | 1_3:-44474462 | Msa0119950:CDS |
| GATTTGATGATCAGTGATGA+TGG | 0.631118 | 1_3:-44472463 | Msa0119950:CDS |
| GACCATAAATCGTCATCACG+TGG | 0.631638 | 1_3:-44482514 | Msa0119950:CDS |
| TTTAGAGCTAACGTTGAGTG+GGG | 0.633009 | 1_3:-44479045 | Msa0119950:CDS |
| GACAGTCATACCATCATCAG+AGG | 0.633736 | 1_3:+44482681 | None:intergenic |
| CACTAGAGGAACCATTCGAA+AGG | 0.635054 | 1_3:+44482884 | None:intergenic |
| TGATGCTGGAGGTGTTCAGA+TGG | 0.637713 | 1_3:-44472425 | Msa0119950:CDS |
| TTAATGCAGAGATAAGACAT+TGG | 0.637829 | 1_3:-44476300 | Msa0119950:intron |
| TACCCGGAGTGCCAGACACG+TGG | 0.640012 | 1_3:+44470580 | Msa0119940:CDS |
| GCAGCTGAATTTCTGTCCAG+AGG | 0.641446 | 1_3:-44477586 | Msa0119950:CDS |
| CATGGTCATAGTAAACCAGA+AGG | 0.642727 | 1_3:-44477715 | Msa0119950:CDS |
| TAGTGTAGGGAGAAAAGTGT+CGG | 0.645116 | 1_3:-44482866 | Msa0119950:CDS |
| GATGATGGTATGACTGTCAA+CGG | 0.647798 | 1_3:-44482676 | Msa0119950:CDS |
| CGTTATAACGGTGATGCTGG+AGG | 0.661558 | 1_3:-44472436 | Msa0119950:CDS |
| GCACTCCGGGTAAACACCAG+TGG | 0.663248 | 1_3:-44470569 | Msa0119950:three_prime_UTR |
| TGGAGTGCATGGATGAACTT+GGG | 0.666848 | 1_3:-44477464 | Msa0119950:CDS |
| AGCATATAATAAAGAGTACA+CGG | 0.668169 | 1_3:+44480231 | None:intergenic |
| TATTACAGGTATCTTATTGG+GGG | 0.669200 | 1_3:-44477945 | Msa0119950:intron |
| TAGAGAAGGAAGAGGTTGCG+TGG | 0.670245 | 1_3:+44485321 | None:intergenic |
| AATGGCACATGGAATGAAGG+AGG | 0.677257 | 1_3:+44470327 | Msa0119940:CDS |
| AGGAAACTGTGACAAAGACA+AGG | 0.691950 | 1_3:+44470347 | Msa0119940:CDS |
| TGACAATGCCTTCACCCATG+CGG | 0.692935 | 1_3:+44482453 | None:intergenic |
| CACCAGTGGCTACAATCCTG+AGG | 0.695000 | 1_3:-44470555 | Msa0119950:three_prime_UTR |
| CAAACTAAAAGAAACGGGAA+CGG | 0.697326 | 1_3:-44472359 | Msa0119950:intron |
| ACAGCCTGCACCAAATGTAG+GGG | 0.706149 | 1_3:-44473034 | Msa0119950:CDS |
| TAGTGATCAAACCATCACAC+CGG | 0.716684 | 1_3:-44474725 | Msa0119950:CDS |
| GAAAGAAGCTGAATTCCTGG+AGG | 0.720772 | 1_3:-44475847 | Msa0119950:CDS |
| GGATGTGTAAATTTGATGCG+AGG | 0.721302 | 1_3:-44470244 | Msa0119950:three_prime_UTR |
| CTATCAATCAGAAAACAATG+AGG | 0.721354 | 1_3:-44472923 | Msa0119950:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAAAAATAATAAAA+AGG | + | chr1_3:44479267-44479286 | None:intergenic | 0.0% |
| !!! | CATTTTTATTTTATTTTTAC+CGG | + | chr1_3:44470740-44470759 | None:intergenic | 10.0% |
| !! | AAATAAATCAAAAAGTTAAT+CGG | + | chr1_3:44471063-44471082 | None:intergenic | 10.0% |
| !! | AATTTATAATACAATACTTA+CGG | + | chr1_3:44471472-44471491 | None:intergenic | 10.0% |
| !!! | TTTTGTGAAAATAAAAATAT+AGG | - | chr1_3:44472975-44472994 | Msa0119950:CDS | 10.0% |
| !!! | TTTCAATATTTTAAAATTAC+TGG | - | chr1_3:44473591-44473610 | Msa0119950:intron | 10.0% |
| !!! | TATTTGTAGTTTTTTATATT+AGG | + | chr1_3:44474197-44474216 | None:intergenic | 10.0% |
| !! | TAGAATTATAATTCTATTAT+TGG | + | chr1_3:44474244-44474263 | None:intergenic | 10.0% |
| !! | TGTAAATAAAATAATAAGAA+TGG | - | chr1_3:44476869-44476888 | Msa0119950:intron | 10.0% |
| !!! | TTTCTTATTTATTTTATGTT+AGG | - | chr1_3:44477825-44477844 | Msa0119950:intron | 10.0% |
| !! | AAAAAATAATAAAAAGGTTT+GGG | + | chr1_3:44479261-44479280 | None:intergenic | 10.0% |
| !! | AAAAAAATAATAAAAAGGTT+TGG | + | chr1_3:44479262-44479281 | None:intergenic | 10.0% |
| !!! | ATAAATTTGTTTATACTTTA+TGG | - | chr1_3:44481552-44481571 | Msa0119950:intron | 10.0% |
| !!! | ATGATTAAAGAAAGTTTTTT+AGG | - | chr1_3:44470558-44470577 | Msa0119950:three_prime_UTR | 15.0% |
| !! | AATTGAAAATGATAACAAAA+TGG | - | chr1_3:44470801-44470820 | Msa0119950:CDS | 15.0% |
| !! | ATTGAAAATGATAACAAAAT+GGG | - | chr1_3:44470802-44470821 | Msa0119950:CDS | 15.0% |
| !! | TTTATAGTATTCAAATCATA+CGG | + | chr1_3:44471220-44471239 | None:intergenic | 15.0% |
| !! | GATTTGAATACTATAAATAT+AGG | - | chr1_3:44471223-44471242 | Msa0119950:intron | 15.0% |
| !! | TAATTAGGAATATTTACAAA+AGG | + | chr1_3:44473516-44473535 | None:intergenic | 15.0% |
| !!! | TTACTTTTGTTTGTTAAATT+AGG | - | chr1_3:44473798-44473817 | Msa0119950:intron | 15.0% |
| !!! | AATAAAATACAGATTTTATC+AGG | + | chr1_3:44475418-44475437 | None:intergenic | 15.0% |
| !! | TTACAAAATACACAAATAAA+TGG | + | chr1_3:44476934-44476953 | None:intergenic | 15.0% |
| !! | TTTATACGATTATTTATTAC+AGG | - | chr1_3:44477366-44477385 | Msa0119950:intron | 15.0% |
| !! | CAATAAAAACTATAAATACA+AGG | + | chr1_3:44478924-44478943 | None:intergenic | 15.0% |
| !!! | CTTGTATTTATAGTTTTTAT+TGG | - | chr1_3:44478922-44478941 | Msa0119950:intron | 15.0% |
| !! | AAATTTAAAAAGATAATAGG+TGG | + | chr1_3:44479007-44479026 | None:intergenic | 15.0% |
| !!! | TTTTATATGAGAAAACAAAT+TGG | - | chr1_3:44479871-44479890 | Msa0119950:intron | 15.0% |
| !!! | AATTTTATAAATACAATACG+CGG | - | chr1_3:44480151-44480170 | Msa0119950:intron | 15.0% |
| !!! | TTTTTTTTCTTTCAAATTAG+TGG | - | chr1_3:44480418-44480437 | Msa0119950:intron | 15.0% |
| !!! | TTGATTTTATTAGGAAATTT+AGG | - | chr1_3:44481309-44481328 | Msa0119950:intron | 15.0% |
| !!! | TGATTTTATTAGGAAATTTA+GGG | - | chr1_3:44481310-44481329 | Msa0119950:intron | 15.0% |
| !! | TTCCAAAAATAATCAAATAT+CGG | - | chr1_3:44481592-44481611 | Msa0119950:intron | 15.0% |
| !! | GATTAATTATCTATTCTAAT+TGG | - | chr1_3:44482199-44482218 | Msa0119950:intron | 15.0% |
| !!! | TAAATGGTAATGAATAAAAA+AGG | - | chr1_3:44482639-44482658 | Msa0119950:CDS | 15.0% |
| !! | AAAATTTAAACAAATCAACA+TGG | - | chr1_3:44483619-44483638 | Msa0119950:intron | 15.0% |
| !! | ATCATCATTCAAATATTTAT+AGG | + | chr1_3:44484101-44484120 | None:intergenic | 15.0% |
| !! | CAAAAAATGGAAATAAAGAA+AGG | + | chr1_3:44469977-44469996 | Msa0119940:intron | 20.0% |
| !!! | TTCACGTTTATTTTTAAACT+CGG | + | chr1_3:44470303-44470322 | Msa0119940:intron | 20.0% |
| !!! | CAAAAATTAGATTTTCAGTT+AGG | + | chr1_3:44470416-44470435 | Msa0119940:CDS | 20.0% |
| !!! | GTTTTACGGTTATATTATTA+AGG | - | chr1_3:44470943-44470962 | Msa0119950:intron | 20.0% |
| !! | TTGAAATGATTCTATGATTA+TGG | - | chr1_3:44471288-44471307 | Msa0119950:intron | 20.0% |
| !!! | ATCTAAATTTTATGCATGAT+TGG | + | chr1_3:44471695-44471714 | None:intergenic | 20.0% |
| !!! | AGCTAATTAGTTTCAAATAA+CGG | + | chr1_3:44471783-44471802 | None:intergenic | 20.0% |
| !! | GTTACTATGTAAAACAAAAT+AGG | + | chr1_3:44472319-44472338 | None:intergenic | 20.0% |
| !!! | ATTTTTATTTTCACAAAAGC+AGG | + | chr1_3:44472973-44472992 | None:intergenic | 20.0% |
| !! | GGTATTATGTATAAAAATCT+CGG | + | chr1_3:44473202-44473221 | None:intergenic | 20.0% |
| !!! | ATACAAATACTGTTTCTTTA+TGG | - | chr1_3:44473330-44473349 | Msa0119950:intron | 20.0% |
| !! | GTAAATATTCCTAATTAAGT+AGG | - | chr1_3:44473519-44473538 | Msa0119950:intron | 20.0% |
| !!! | TACTTTTTTGTTTGAAAACT+CGG | + | chr1_3:44473560-44473579 | None:intergenic | 20.0% |
| !!! | CTTCTTTTAACAAATTTAGA+GGG | - | chr1_3:44473648-44473667 | Msa0119950:intron | 20.0% |
| !!! | ATACTAAAGAAATTTTGCTA+TGG | - | chr1_3:44473684-44473703 | Msa0119950:intron | 20.0% |
| !!! | TTAGTGTATTGCATATTTTT+AGG | - | chr1_3:44473768-44473787 | Msa0119950:intron | 20.0% |
| !!! | TTTGCTAAATTACTTTTCTT+TGG | - | chr1_3:44473839-44473858 | Msa0119950:intron | 20.0% |
| !! | ACTTTGGATATTATTACTAT+TGG | + | chr1_3:44474089-44474108 | None:intergenic | 20.0% |
| !!! | TTTGTTTCTTTGCTTTATTA+TGG | + | chr1_3:44474277-44474296 | None:intergenic | 20.0% |
| !! | ATAAATCAAGTTTAGATTTG+AGG | + | chr1_3:44474883-44474902 | None:intergenic | 20.0% |
| !! | CTTTACAAATCATATTCATT+TGG | + | chr1_3:44474923-44474942 | None:intergenic | 20.0% |
| !! | ATTCATTTATGATGTAGAAT+AGG | + | chr1_3:44474967-44474986 | None:intergenic | 20.0% |
| !!! | CTACATCATAAATGAATTTT+TGG | - | chr1_3:44474970-44474989 | Msa0119950:intron | 20.0% |
| !!! | ACAGTTTATTAATTTTTCTC+AGG | - | chr1_3:44475068-44475087 | Msa0119950:intron | 20.0% |
| !! | AGAATGAAATAGAAATTCTT+CGG | - | chr1_3:44475236-44475255 | Msa0119950:intron | 20.0% |
| !! | AATTATCTGATGAATAGTTT+CGG | + | chr1_3:44475298-44475317 | None:intergenic | 20.0% |
| !! | TAAAACTAAAGATGTAAAGA+AGG | + | chr1_3:44475652-44475671 | None:intergenic | 20.0% |
| !! | TCAAGCTTATAATTCTATAA+AGG | - | chr1_3:44476204-44476223 | Msa0119950:intron | 20.0% |
| !! | TATAATTCTATAAAGGATGT+TGG | - | chr1_3:44476211-44476230 | Msa0119950:intron | 20.0% |
| !! | TAAAAAAATTATACAGTCAG+AGG | + | chr1_3:44476600-44476619 | None:intergenic | 20.0% |
| !!! | TTCTATCATAAACCATATTT+TGG | + | chr1_3:44476649-44476668 | None:intergenic | 20.0% |
| !! | TGGTTTATGATAGAATATTA+TGG | - | chr1_3:44476654-44476673 | Msa0119950:intron | 20.0% |
| !! | AATACACAAATAAATGGAAA+AGG | + | chr1_3:44476928-44476947 | None:intergenic | 20.0% |
| !!! | TTTGTGTATTTTGTAACAAA+AGG | - | chr1_3:44476938-44476957 | Msa0119950:intron | 20.0% |
| !!! | TTGTATATATAGGTGTTTTA+AGG | - | chr1_3:44477231-44477250 | Msa0119950:intron | 20.0% |
| !! | ATAAATGCACAAAAATTCAT+AGG | + | chr1_3:44477339-44477358 | None:intergenic | 20.0% |
| !! | ATTTATTACAGGTATCTTAT+TGG | - | chr1_3:44477377-44477396 | Msa0119950:intron | 20.0% |
| !! | TTTATTACAGGTATCTTATT+GGG | - | chr1_3:44477378-44477397 | Msa0119950:intron | 20.0% |
| !! | ATACAATTGATATGAACTAA+TGG | + | chr1_3:44477435-44477454 | None:intergenic | 20.0% |
| !!! | ATTATTAAGCTGATTTAACT+GGG | - | chr1_3:44477501-44477520 | Msa0119950:intron | 20.0% |
| !!! | TAATTTATTAATTTTGCAGC+TGG | + | chr1_3:44477803-44477822 | None:intergenic | 20.0% |
| !!! | CATCAAAACATTACATTTTT+GGG | - | chr1_3:44477978-44477997 | Msa0119950:intron | 20.0% |
| !!! | ATCAAAACATTACATTTTTG+GGG | - | chr1_3:44477979-44477998 | Msa0119950:intron | 20.0% |
| !!! | AAATTCAGATTTTAAAGTGT+GGG | + | chr1_3:44479139-44479158 | None:intergenic | 20.0% |
| !!! | TAAATTCAGATTTTAAAGTG+TGG | + | chr1_3:44479140-44479159 | None:intergenic | 20.0% |
| !! | TGAAGAATATTGATATGTTA+AGG | + | chr1_3:44479224-44479243 | None:intergenic | 20.0% |
| !!! | TTTGTTTTCTCATATAAAAG+AGG | + | chr1_3:44479870-44479889 | None:intergenic | 20.0% |
| !! | ATAAAATTAAAGTAGCCATT+AGG | + | chr1_3:44480139-44480158 | None:intergenic | 20.0% |
| !! | ATGTATTAACATAAGATGTT+TGG | - | chr1_3:44481002-44481021 | Msa0119950:intron | 20.0% |
| !! | TGTATTAACATAAGATGTTT+GGG | - | chr1_3:44481003-44481022 | Msa0119950:intron | 20.0% |
| !! | TCATATATGTTCTTCAATAA+TGG | - | chr1_3:44481051-44481070 | Msa0119950:intron | 20.0% |
| !! | AATTTAGAAATGACTATGAT+TGG | + | chr1_3:44481086-44481105 | None:intergenic | 20.0% |
| !! | AAAGTAAAAATATGCTTGAT+TGG | - | chr1_3:44481112-44481131 | Msa0119950:intron | 20.0% |
| !! | TTCCTAATAAAATCAAATAG+CGG | + | chr1_3:44481305-44481324 | None:intergenic | 20.0% |
| !!! | TACAGATTATTTTGATAGAA+GGG | - | chr1_3:44481878-44481897 | Msa0119950:intron | 20.0% |
| !! | TTTATTCATTACCATTTACT+AGG | + | chr1_3:44482637-44482656 | None:intergenic | 20.0% |
| !! | TGTTGTAAATAGCATTTATT+AGG | + | chr1_3:44482727-44482746 | None:intergenic | 20.0% |
| !!! | TTTTGACAAACTAAAAGAAA+CGG | - | chr1_3:44482960-44482979 | Msa0119950:intron | 20.0% |
| !!! | CTTTTTAGTTTTAAAAGACA+TGG | + | chr1_3:44483104-44483123 | None:intergenic | 20.0% |
| !! | AAGTTTACTACTTAATAAAC+AGG | - | chr1_3:44483209-44483228 | Msa0119950:intron | 20.0% |
| !! | AATGATAAGAACAATCATAA+AGG | + | chr1_3:44483417-44483436 | None:intergenic | 20.0% |
| !!! | ATTTAAAATCTTAAACTGCT+TGG | - | chr1_3:44484010-44484029 | Msa0119950:intron | 20.0% |
| !! | AAACATCTTATATTGGAAAA+TGG | + | chr1_3:44484253-44484272 | None:intergenic | 20.0% |
| !! | TAGTAAGAAACATCTTATAT+TGG | + | chr1_3:44484260-44484279 | None:intergenic | 20.0% |
| !! | TTTGTTAGCTATACATAAAT+CGG | + | chr1_3:44484610-44484629 | None:intergenic | 20.0% |
| !! | GATATAAATACGTTGTAATA+CGG | - | chr1_3:44484920-44484939 | Msa0119950:intron | 20.0% |
| !!! | TATCCAAATATACTTTTGAA+AGG | - | chr1_3:44485046-44485065 | Msa0119950:intron | 20.0% |
| !!! | TTTTAGTTTTAAGGTCTATA+CGG | - | chr1_3:44485112-44485131 | Msa0119950:intron | 20.0% |
| !!! | TTATTTTTAAACTCGGTATC+CGG | + | chr1_3:44470296-44470315 | Msa0119940:intron | 25.0% |
| ! | ATCAATGATATGTATAAGCT+AGG | - | chr1_3:44470322-44470341 | Msa0119950:three_prime_UTR | 25.0% |
| ! | TTTCTTTAATCATATACTCG+TGG | + | chr1_3:44470551-44470570 | Msa0119940:CDS | 25.0% |
| !!! | TTTTATTTTTACCGGAGATT+GGG | + | chr1_3:44470732-44470751 | None:intergenic | 25.0% |
| !!! | ATTTTATTTTTACCGGAGAT+TGG | + | chr1_3:44470733-44470752 | None:intergenic | 25.0% |
| ! | AAAATGATAACAAAATGGGT+AGG | - | chr1_3:44470806-44470825 | Msa0119950:CDS | 25.0% |
| ! | ATTCTCAATCTAAGAAGAAT+GGG | - | chr1_3:44470865-44470884 | Msa0119950:intron | 25.0% |
| ! | AATAATATAACCGTAAAACG+CGG | + | chr1_3:44470942-44470961 | None:intergenic | 25.0% |
| !! | ATATAGGCAAAATCTTCTTT+TGG | - | chr1_3:44471239-44471258 | Msa0119950:intron | 25.0% |
| !! | AATTTTATGCATGATTGGTA+AGG | + | chr1_3:44471690-44471709 | None:intergenic | 25.0% |
| ! | GAAATAGTTTGGTTGAAATT+CGG | - | chr1_3:44471864-44471883 | Msa0119950:intron | 25.0% |
| ! | AAATAGTTTGGTTGAAATTC+GGG | - | chr1_3:44471865-44471884 | Msa0119950:intron | 25.0% |
| !!! | CTATTTTTCATAAGCTATAC+TGG | + | chr1_3:44472169-44472188 | None:intergenic | 25.0% |
| ! | ATGTAAAACAAAATAGGACA+AGG | + | chr1_3:44472313-44472332 | None:intergenic | 25.0% |
| ! | AATGTACAAAAAACTAAGCT+CGG | + | chr1_3:44472354-44472373 | None:intergenic | 25.0% |
| ! | ATTGCCTACTATTTAGTAAA+TGG | - | chr1_3:44472488-44472507 | Msa0119950:intron | 25.0% |
| ! | TTGCCTACTATTTAGTAAAT+GGG | - | chr1_3:44472489-44472508 | Msa0119950:intron | 25.0% |
| ! | AAGACAAATCATGTTGTATA+AGG | + | chr1_3:44472534-44472553 | None:intergenic | 25.0% |
| !! | ACACTATTTTACGTTTTCTA+AGG | - | chr1_3:44472588-44472607 | Msa0119950:intron | 25.0% |
| !!! | TGCTTTTATGTTTTAACAGT+TGG | + | chr1_3:44473295-44473314 | None:intergenic | 25.0% |
| !! | GAGTTTTCAAACAAAAAAGT+AGG | - | chr1_3:44473559-44473578 | Msa0119950:intron | 25.0% |
| !! | GCTTCTTTTAACAAATTTAG+AGG | - | chr1_3:44473647-44473666 | Msa0119950:intron | 25.0% |
| !! | GTTTGTTAAATTAGGTCATT+TGG | - | chr1_3:44473806-44473825 | Msa0119950:intron | 25.0% |
| ! | GAAAAGTAATTTAGCAAAGA+AGG | + | chr1_3:44473837-44473856 | None:intergenic | 25.0% |
| ! | TAGAGAGAATAATAGGTTAA+GGG | + | chr1_3:44474027-44474046 | None:intergenic | 25.0% |
| ! | TTAGAGAGAATAATAGGTTA+AGG | + | chr1_3:44474028-44474047 | None:intergenic | 25.0% |
| ! | TAGAAGTTAGAGAGAATAAT+AGG | + | chr1_3:44474034-44474053 | None:intergenic | 25.0% |
| ! | GTGAAAAAATTATGAGTGAA+GGG | - | chr1_3:44474319-44474338 | Msa0119950:intron | 25.0% |
| ! | TAAAAAAAGCTTCAAAACAC+AGG | + | chr1_3:44474753-44474772 | None:intergenic | 25.0% |
| !! | CAGTTTTTCTTAAATTTTGC+AGG | + | chr1_3:44475044-44475063 | None:intergenic | 25.0% |
| !! | AGCATATAATAAAGAGTACA+CGG | + | chr1_3:44475097-44475116 | None:intergenic | 25.0% |
| ! | ATGTCAATGTATTTGTTCAA+AGG | - | chr1_3:44475157-44475176 | Msa0119950:intron | 25.0% |
| ! | CTATTATAAAACTTCACACA+GGG | + | chr1_3:44475266-44475285 | None:intergenic | 25.0% |
| ! | TCTATTATAAAACTTCACAC+AGG | + | chr1_3:44475267-44475286 | None:intergenic | 25.0% |
| ! | ATTATCTGATGAATAGTTTC+GGG | + | chr1_3:44475297-44475316 | None:intergenic | 25.0% |
| ! | AAATATATTTCGCATAGCTA+TGG | - | chr1_3:44475346-44475365 | Msa0119950:intron | 25.0% |
| ! | AAAGTTTAAATCTATGACTC+AGG | - | chr1_3:44475459-44475478 | Msa0119950:intron | 25.0% |
| ! | TCCTTTGTTAATAAGTTTGA+AGG | - | chr1_3:44475850-44475869 | Msa0119950:CDS | 25.0% |
| ! | CCTTTGTTAATAAGTTTGAA+GGG | - | chr1_3:44475851-44475870 | Msa0119950:CDS | 25.0% |
| ! | CTTTGTTAATAAGTTTGAAG+GGG | - | chr1_3:44475852-44475871 | Msa0119950:CDS | 25.0% |
| ! | AAAGAAAACATACAAAGCAA+TGG | + | chr1_3:44475896-44475915 | None:intergenic | 25.0% |
| ! | CGTCTATAAATATAACATGA+AGG | + | chr1_3:44475968-44475987 | None:intergenic | 25.0% |
| !! | AGAGAATTTCTTGTACATTT+TGG | - | chr1_3:44476241-44476260 | Msa0119950:CDS | 25.0% |
| ! | CTATTGATAAGGAGAAAATA+TGG | - | chr1_3:44476356-44476375 | Msa0119950:intron | 25.0% |
| !! | AACAAAGTATAGCTTTACTT+TGG | + | chr1_3:44476524-44476543 | None:intergenic | 25.0% |
| ! | AAAATTCTTATTCATTCACG+TGG | - | chr1_3:44476561-44476580 | Msa0119950:intron | 25.0% |
| !! | TAATGAGTTGAACCAAAATA+TGG | - | chr1_3:44476634-44476653 | Msa0119950:intron | 25.0% |
| !!! | ATGATTTTTTTTTTCCAGCA+TGG | - | chr1_3:44476780-44476799 | Msa0119950:intron | 25.0% |
| ! | TTTGGATTCTTTATTGCTTT+AGG | - | chr1_3:44477012-44477031 | Msa0119950:intron | 25.0% |
| !! | ATTACTATTGTTAGAGTACT+AGG | - | chr1_3:44477128-44477147 | Msa0119950:intron | 25.0% |
| ! | TTATTACAGGTATCTTATTG+GGG | - | chr1_3:44477379-44477398 | Msa0119950:intron | 25.0% |
| ! | TTCATATCAATTGTATGTTG+AGG | - | chr1_3:44477439-44477458 | Msa0119950:intron | 25.0% |
| ! | TATGTTGAGGTTAGTATTTA+TGG | - | chr1_3:44477452-44477471 | Msa0119950:intron | 25.0% |
| !! | GATTATTAAGCTGATTTAAC+TGG | - | chr1_3:44477500-44477519 | Msa0119950:intron | 25.0% |
| !! | TTATTAAGCTGATTTAACTG+GGG | - | chr1_3:44477502-44477521 | Msa0119950:intron | 25.0% |
| !! | GCATCAAAACATTACATTTT+TGG | - | chr1_3:44477977-44477996 | Msa0119950:intron | 25.0% |
| ! | ACTACAGCCATTATATAAAA+CGG | + | chr1_3:44478137-44478156 | None:intergenic | 25.0% |
| ! | TAGTTGTTCACAAAAAGAAT+TGG | - | chr1_3:44478254-44478273 | Msa0119950:CDS | 25.0% |
| !!! | TCTTAATGTGGTTTTAAATG+TGG | - | chr1_3:44478307-44478326 | Msa0119950:CDS | 25.0% |
| !!! | CTTAATGTGGTTTTAAATGT+GGG | - | chr1_3:44478308-44478327 | Msa0119950:CDS | 25.0% |
| ! | TAAAGAAAGTAAATGACACA+TGG | - | chr1_3:44478460-44478479 | Msa0119950:intron | 25.0% |
| ! | GATGTATTTGAAAACTACTA+TGG | + | chr1_3:44478597-44478616 | None:intergenic | 25.0% |
| !!! | TTCTTTCTTTTCTAGAGAAT+TGG | + | chr1_3:44478756-44478775 | None:intergenic | 25.0% |
| ! | AGAAAGAAAATCCAATCTAA+TGG | - | chr1_3:44478768-44478787 | Msa0119950:intron | 25.0% |
| ! | TACAAGGTGTATAACTAAAT+AGG | + | chr1_3:44478908-44478927 | None:intergenic | 25.0% |
| !! | AAAAATGTTTTCACAAGATC+TGG | + | chr1_3:44478952-44478971 | None:intergenic | 25.0% |
| ! | GAAATAATACACTACTGAAA+TGG | + | chr1_3:44479182-44479201 | None:intergenic | 25.0% |
| ! | TGAAATCAAATGTCAAAAAG+AGG | + | chr1_3:44479323-44479342 | None:intergenic | 25.0% |
| !!! | TCTTTTTGACATTTGATTTC+AGG | - | chr1_3:44479322-44479341 | Msa0119950:intron | 25.0% |
| ! | AAAGAGGTTATTTACTTTCA+AGG | + | chr1_3:44479616-44479635 | None:intergenic | 25.0% |
| !!! | TTCTATTTTTTTCCTGAAAG+TGG | - | chr1_3:44479664-44479683 | Msa0119950:intron | 25.0% |
| !!! | TCTATTTTTTTCCTGAAAGT+GGG | - | chr1_3:44479665-44479684 | Msa0119950:intron | 25.0% |
| ! | TTTATCAACAAACACAATTC+AGG | + | chr1_3:44479726-44479745 | None:intergenic | 25.0% |
| !! | ATAACCTTAATTGCCATTTA+GGG | + | chr1_3:44479898-44479917 | None:intergenic | 25.0% |
| !! | TATAACCTTAATTGCCATTT+AGG | + | chr1_3:44479899-44479918 | None:intergenic | 25.0% |
| ! | TTTGTCTCGAAAGATTAATT+TGG | - | chr1_3:44479923-44479942 | Msa0119950:intron | 25.0% |
| ! | CTAATTACTAGTACCAAAAT+GGG | + | chr1_3:44479988-44480007 | None:intergenic | 25.0% |
| ! | TCTAATTACTAGTACCAAAA+TGG | + | chr1_3:44479989-44480008 | None:intergenic | 25.0% |
| ! | ATGGCAAATATATGTTTGAA+AGG | - | chr1_3:44480019-44480038 | Msa0119950:intron | 25.0% |
| ! | TACTCTATTACAGGTTATTT+GGG | + | chr1_3:44480104-44480123 | None:intergenic | 25.0% |
| ! | AATAATCATATGCAGTACTT+TGG | - | chr1_3:44480209-44480228 | Msa0119950:CDS | 25.0% |
| ! | TTTAAGCAAAGACATAAAAC+TGG | + | chr1_3:44480309-44480328 | None:intergenic | 25.0% |
| ! | TTAAAAGTCTTGGTGAAAAT+TGG | - | chr1_3:44480324-44480343 | Msa0119950:intron | 25.0% |
| ! | TAAAAGTCTTGGTGAAAATT+GGG | - | chr1_3:44480325-44480344 | Msa0119950:intron | 25.0% |
| ! | AAACAGAATAAAGTAGTAGT+TGG | + | chr1_3:44480735-44480754 | None:intergenic | 25.0% |
| !! | CTACTACTTTATTCTGTTTT+CGG | - | chr1_3:44480736-44480755 | Msa0119950:intron | 25.0% |
| !! | TTTCGGTAAATGTAATTTTC+TGG | - | chr1_3:44480753-44480772 | Msa0119950:intron | 25.0% |
| ! | ATTTCACAAAAGATACGAAA+AGG | + | chr1_3:44480948-44480967 | None:intergenic | 25.0% |
| ! | GAGAAAGTTGAAAAATGTTA+GGG | + | chr1_3:44481356-44481375 | None:intergenic | 25.0% |
| ! | AGAGAAAGTTGAAAAATGTT+AGG | + | chr1_3:44481357-44481376 | None:intergenic | 25.0% |
| !! | CACCGATATTTGATTATTTT+TGG | + | chr1_3:44481597-44481616 | None:intergenic | 25.0% |
| ! | GACACAACTAAGATTATATT+TGG | - | chr1_3:44481700-44481719 | Msa0119950:intron | 25.0% |
| !!! | ACATCTAGTCACTTTTTTAA+AGG | + | chr1_3:44481761-44481780 | None:intergenic | 25.0% |
| !!! | CTACAGATTATTTTGATAGA+AGG | - | chr1_3:44481877-44481896 | Msa0119950:intron | 25.0% |
| !! | AAAAAACCAGTTTTCTTGTT+GGG | + | chr1_3:44482000-44482019 | None:intergenic | 25.0% |
| !! | TAAAAAACCAGTTTTCTTGT+TGG | + | chr1_3:44482001-44482020 | None:intergenic | 25.0% |
| !!! | TCTTTGAGTTTTGAGTATTA+TGG | - | chr1_3:44482234-44482253 | Msa0119950:intron | 25.0% |
| ! | CATGACATTATGTAATTATC+AGG | + | chr1_3:44482678-44482697 | None:intergenic | 25.0% |
| ! | CTGATAATTACATAATGTCA+TGG | - | chr1_3:44482676-44482695 | Msa0119950:CDS | 25.0% |
| ! | TTTGACAAACTAAAAGAAAC+GGG | - | chr1_3:44482961-44482980 | Msa0119950:intron | 25.0% |
| !!! | GTTTTAAAAGACATGGAATA+GGG | + | chr1_3:44483097-44483116 | None:intergenic | 25.0% |
| !!! | AGTTTTAAAAGACATGGAAT+AGG | + | chr1_3:44483098-44483117 | None:intergenic | 25.0% |
| ! | ATTATAAGGATGAGATTGTA+AGG | - | chr1_3:44483933-44483952 | Msa0119950:intron | 25.0% |
| ! | GTTCCACTTCAATATTTATA+CGG | + | chr1_3:44484155-44484174 | None:intergenic | 25.0% |
| ! | AATATTGAAGTGGAACAAAA+TGG | - | chr1_3:44484159-44484178 | Msa0119950:intron | 25.0% |
| ! | TAAGATGTTTCTTACTAAGA+AGG | - | chr1_3:44484263-44484282 | Msa0119950:intron | 25.0% |
| ! | AAGTCATAATGTTTATACCA+GGG | + | chr1_3:44484364-44484383 | None:intergenic | 25.0% |
| ! | AAAGTCATAATGTTTATACC+AGG | + | chr1_3:44484365-44484384 | None:intergenic | 25.0% |
| ! | TTTGAACATCACATATCTTT+CGG | + | chr1_3:44484855-44484874 | None:intergenic | 25.0% |
| !! | CATCCTTTCAAAAGTATATT+TGG | + | chr1_3:44485052-44485071 | None:intergenic | 25.0% |
| !!! | TTTTGAAAGGATGACTAAAA+TGG | - | chr1_3:44485059-44485078 | Msa0119950:intron | 25.0% |
| ! | TTTGAAAGGATGACTAAAAT+GGG | - | chr1_3:44485060-44485079 | Msa0119950:intron | 25.0% |
| !!! | GTGACATACTTTTAGTTTTA+AGG | - | chr1_3:44485103-44485122 | Msa0119950:intron | 25.0% |
| AGAAAAGAGTGAAATAGAGA+AGG | + | chr1_3:44470021-44470040 | Msa0119940:intron | 30.0% | |
| CCTTAACGGAAGAAAATTAT+TGG | + | chr1_3:44470142-44470161 | Msa0119940:intron | 30.0% | |
| ! | CCAATAATTTTCTTCCGTTA+AGG | - | chr1_3:44470139-44470158 | Msa0119950:three_prime_UTR | 30.0% |
| ! | GAGAAATGGATTTACCTTAA+CGG | + | chr1_3:44470156-44470175 | Msa0119940:intron | 30.0% |
| !! | TAAGCTAGGTTTACTTTTAC+TGG | - | chr1_3:44470336-44470355 | Msa0119950:three_prime_UTR | 30.0% |
| !!! | TTAACACTACCCTTTTTTGT+AGG | - | chr1_3:44470477-44470496 | Msa0119950:three_prime_UTR | 30.0% |
| CCTGAATTACCTACAAAAAA+GGG | + | chr1_3:44470489-44470508 | Msa0119940:CDS | 30.0% | |
| ACCTGAATTACCTACAAAAA+AGG | + | chr1_3:44470490-44470509 | Msa0119940:CDS | 30.0% | |
| !!! | AGAAAGTTTTTTAGGTCAAG+AGG | - | chr1_3:44470566-44470585 | Msa0119950:three_prime_UTR | 30.0% |
| !! | GAAATATCAAATCGACTTGT+TGG | - | chr1_3:44470597-44470616 | Msa0119950:three_prime_UTR | 30.0% |
| ! | TATAGGACCTATTTTACTGA+CGG | + | chr1_3:44470694-44470713 | None:intergenic | 30.0% |
| CATTCTCAATCTAAGAAGAA+TGG | - | chr1_3:44470864-44470883 | Msa0119950:intron | 30.0% | |
| TTCTCAATCTAAGAAGAATG+GGG | - | chr1_3:44470866-44470885 | Msa0119950:intron | 30.0% | |
| ATAATATAACCGTAAAACGC+GGG | + | chr1_3:44470941-44470960 | None:intergenic | 30.0% | |
| CGAAGTTACAAGAAATAGTT+TGG | - | chr1_3:44471853-44471872 | Msa0119950:intron | 30.0% | |
| TAAGCATTTATGAGACTGTT+TGG | - | chr1_3:44471926-44471945 | Msa0119950:intron | 30.0% | |
| AAGCATTTATGAGACTGTTT+GGG | - | chr1_3:44471927-44471946 | Msa0119950:intron | 30.0% | |
| GAGCTTATGAAAATAGCTTA+TGG | - | chr1_3:44471951-44471970 | Msa0119950:CDS | 30.0% | |
| !! | AATAAGTTGATAACAGCCTA+TGG | + | chr1_3:44471987-44472006 | None:intergenic | 30.0% |
| AACTTATTTCCACAAGCTTT+AGG | - | chr1_3:44471999-44472018 | Msa0119950:CDS | 30.0% | |
| ! | TGTTTTCAACTTATTTCCAC+AGG | - | chr1_3:44472063-44472082 | Msa0119950:CDS | 30.0% |
| GTTTCTAATTGCAAGTCATT+TGG | - | chr1_3:44472400-44472419 | Msa0119950:CDS | 30.0% | |
| TGCCTACTATTTAGTAAATG+GGG | - | chr1_3:44472490-44472509 | Msa0119950:intron | 30.0% | |
| !! | CTATTTTACGTTTTCTAAGG+CGG | - | chr1_3:44472591-44472610 | Msa0119950:intron | 30.0% |
| !!! | TATTTTACGTTTTCTAAGGC+GGG | - | chr1_3:44472592-44472611 | Msa0119950:intron | 30.0% |
| TGCTAACCTTGAAAAAATGA+GGG | - | chr1_3:44472693-44472712 | Msa0119950:intron | 30.0% | |
| !!! | ATTTCACCCTCATTTTTTCA+AGG | + | chr1_3:44472702-44472721 | None:intergenic | 30.0% |
| ! | GAAGATGAAGACTTTTATGA+TGG | - | chr1_3:44472736-44472755 | Msa0119950:intron | 30.0% |
| !!! | TTTTGTTTTACATGCCTTGT+TGG | - | chr1_3:44473097-44473116 | Msa0119950:intron | 30.0% |
| GTTTCTTTATGGTAACTGAA+AGG | - | chr1_3:44473341-44473360 | Msa0119950:intron | 30.0% | |
| AAGCAATAATGTCAATCTGT+TGG | + | chr1_3:44473631-44473650 | None:intergenic | 30.0% | |
| AGTTATTAAATGTCCAGCTT+GGG | - | chr1_3:44473740-44473759 | Msa0119950:intron | 30.0% | |
| !!! | ACTTTTGAGTTTGACTACTT+TGG | + | chr1_3:44474105-44474124 | None:intergenic | 30.0% |
| ! | TCTTTGCTTTATTATGGAGT+TGG | + | chr1_3:44474271-44474290 | None:intergenic | 30.0% |
| CCAGATAAAAAACAAACCAA+CGG | - | chr1_3:44474297-44474316 | Msa0119950:intron | 30.0% | |
| !!! | ACTCATAATTTTTTCACCGT+TGG | + | chr1_3:44474316-44474335 | None:intergenic | 30.0% |
| GGTGAAAAAATTATGAGTGA+AGG | - | chr1_3:44474318-44474337 | Msa0119950:intron | 30.0% | |
| AAAAATTATGAGTGAAGGGA+AGG | - | chr1_3:44474323-44474342 | Msa0119950:intron | 30.0% | |
| CAATAAAAGAACTGTGATAC+TGG | - | chr1_3:44474400-44474419 | Msa0119950:intron | 30.0% | |
| ATACTGGTATCTATTTGAGT+GGG | - | chr1_3:44474416-44474435 | Msa0119950:intron | 30.0% | |
| AAAAATAAAAGCAGAGGGTT+AGG | - | chr1_3:44474458-44474477 | Msa0119950:CDS | 30.0% | |
| AAAATAAAAGCAGAGGGTTA+GGG | - | chr1_3:44474459-44474478 | Msa0119950:CDS | 30.0% | |
| GTTCTCTTCATTTATACTAG+GGG | + | chr1_3:44474655-44474674 | None:intergenic | 30.0% | |
| CGTTCTCTTCATTTATACTA+GGG | + | chr1_3:44474656-44474675 | None:intergenic | 30.0% | |
| TCGTTCTCTTCATTTATACT+AGG | + | chr1_3:44474657-44474676 | None:intergenic | 30.0% | |
| AATAGTGAGATATGATCAAC+TGG | + | chr1_3:44475015-44475034 | None:intergenic | 30.0% | |
| TCAATGTATTTGTTCAAAGG+AGG | - | chr1_3:44475160-44475179 | Msa0119950:intron | 30.0% | |
| AAATCTATGACTCAGGTTTA+AGG | - | chr1_3:44475466-44475485 | Msa0119950:intron | 30.0% | |
| ! | GGTAGTAACTTGTGTTAATA+TGG | - | chr1_3:44475487-44475506 | Msa0119950:intron | 30.0% |
| !! | TAATATGGAAGTTTTGTAGC+AGG | - | chr1_3:44475502-44475521 | Msa0119950:intron | 30.0% |
| TAAGTATACAATCACTGTGA+TGG | + | chr1_3:44475557-44475576 | None:intergenic | 30.0% | |
| AATACGAGCGAATCAAATAT+TGG | + | chr1_3:44475600-44475619 | None:intergenic | 30.0% | |
| AACTTGTGTAAATGTTGCAT+TGG | - | chr1_3:44475710-44475729 | Msa0119950:intron | 30.0% | |
| CCCTTCAAACTTATTAACAA+AGG | + | chr1_3:44475854-44475873 | None:intergenic | 30.0% | |
| !! | ATATTTTTGACTGAATTCCC+AGG | - | chr1_3:44475999-44476018 | Msa0119950:intron | 30.0% |
| GAATTATAAGCTTGACTTAC+AGG | + | chr1_3:44476199-44476218 | None:intergenic | 30.0% | |
| !! | TTCAGAAGAGGTTATTTTCT+GGG | - | chr1_3:44476303-44476322 | Msa0119950:intron | 30.0% |
| ! | GTTGTTGTTGTATTGACATT+TGG | - | chr1_3:44476724-44476743 | Msa0119950:intron | 30.0% |
| AAATCATTTCTATCCCTAGT+GGG | + | chr1_3:44476767-44476786 | None:intergenic | 30.0% | |
| AAAATCATTTCTATCCCTAG+TGG | + | chr1_3:44476768-44476787 | None:intergenic | 30.0% | |
| !!! | ATTTTTTTTTTCCAGCATGG+AGG | - | chr1_3:44476783-44476802 | Msa0119950:intron | 30.0% |
| ! | AAGTACACGAACATTTCTTT+TGG | - | chr1_3:44477038-44477057 | Msa0119950:intron | 30.0% |
| AAATCTTCAATTGGATCATC+GGG | + | chr1_3:44477081-44477100 | None:intergenic | 30.0% | |
| GAAATCTTCAATTGGATCAT+CGG | + | chr1_3:44477082-44477101 | None:intergenic | 30.0% | |
| ATCCAATTGAAGATTTCATC+AGG | - | chr1_3:44477085-44477104 | Msa0119950:intron | 30.0% | |
| TACCTGATGAAATCTTCAAT+TGG | + | chr1_3:44477090-44477109 | None:intergenic | 30.0% | |
| !! | ACTAGGTGTCTTATTGTTTT+AGG | - | chr1_3:44477145-44477164 | Msa0119950:intron | 30.0% |
| !!! | GTCATGAATAGATTTTGGTT+AGG | - | chr1_3:44477171-44477190 | Msa0119950:intron | 30.0% |
| GGTCAGATGATTGTATATAT+AGG | - | chr1_3:44477221-44477240 | Msa0119950:intron | 30.0% | |
| TATTACAGGTATCTTATTGG+GGG | - | chr1_3:44477380-44477399 | Msa0119950:intron | 30.0% | |
| AGCATATATCGTTAAATGCA+AGG | + | chr1_3:44477479-44477498 | None:intergenic | 30.0% | |
| ! | GCTTTATTAAATACAGCACA+TGG | - | chr1_3:44477692-44477711 | Msa0119950:CDS | 30.0% |
| AATGCAAAAAAGACTGTAGA+TGG | + | chr1_3:44477916-44477935 | None:intergenic | 30.0% | |
| !!! | AGTCTTTTTTGCATTCCATT+AGG | - | chr1_3:44477921-44477940 | Msa0119950:CDS | 30.0% |
| !!! | ATGTTTTGATGCATGAATCA+TGG | + | chr1_3:44477969-44477988 | None:intergenic | 30.0% |
| TTGTTCACAAAAAGAATTGG+AGG | - | chr1_3:44478257-44478276 | Msa0119950:CDS | 30.0% | |
| TAGAAGCTAAAGTAAAGTTG+AGG | + | chr1_3:44478339-44478358 | None:intergenic | 30.0% | |
| ! | TTATCCTACAAATGCTCTTT+TGG | - | chr1_3:44478407-44478426 | Msa0119950:intron | 30.0% |
| TTCTTTCTACGGAATAATCA+CGG | - | chr1_3:44478437-44478456 | Msa0119950:intron | 30.0% | |
| !! | AAGATGGATTGAAGACAAAA+TGG | - | chr1_3:44478494-44478513 | Msa0119950:intron | 30.0% |
| TCTTAAGTTCATTTCCTGAA+AGG | + | chr1_3:44478639-44478658 | None:intergenic | 30.0% | |
| TTTCAGGAAATGAACTTAAG+AGG | - | chr1_3:44478638-44478657 | Msa0119950:intron | 30.0% | |
| ! | ACTTAAGAGGTTGATCAAAA+CGG | - | chr1_3:44478651-44478670 | Msa0119950:intron | 30.0% |
| ATCGATATGTCAGTAAGATT+TGG | - | chr1_3:44478719-44478738 | Msa0119950:intron | 30.0% | |
| ! | ATATGTCAGTAAGATTTGGT+TGG | - | chr1_3:44478723-44478742 | Msa0119950:intron | 30.0% |
| TAAACGCATTTCCATTAGAT+TGG | + | chr1_3:44478782-44478801 | None:intergenic | 30.0% | |
| TGATTGGAATTAGAAACTCT+TGG | + | chr1_3:44478979-44478998 | None:intergenic | 30.0% | |
| TTAATGCAGAGATAAGACAT+TGG | - | chr1_3:44479025-44479044 | Msa0119950:CDS | 30.0% | |
| !! | TTTTATCGTTGACTGAATTG+TGG | + | chr1_3:44479087-44479106 | None:intergenic | 30.0% |
| !!! | TATTTTTTCCAAGTCAGAAC+AGG | + | chr1_3:44479447-44479466 | None:intergenic | 30.0% |
| !! | GTTCTGACTTGGAAAAAATA+CGG | - | chr1_3:44479447-44479466 | Msa0119950:CDS | 30.0% |
| ATTATACCAGGAATTGGTAA+AGG | + | chr1_3:44479574-44479593 | None:intergenic | 30.0% | |
| AGAAGACATCAACATAAAGA+AGG | + | chr1_3:44479648-44479667 | None:intergenic | 30.0% | |
| CAATTCAGGACACAATTATT+TGG | + | chr1_3:44479712-44479731 | None:intergenic | 30.0% | |
| ATTGACTGATCAACATAACA+GGG | - | chr1_3:44479751-44479770 | Msa0119950:intron | 30.0% | |
| AACCAGATAATAATCAGTGA+TGG | - | chr1_3:44479778-44479797 | Msa0119950:intron | 30.0% | |
| ACCAGATAATAATCAGTGAT+GGG | - | chr1_3:44479779-44479798 | Msa0119950:intron | 30.0% | |
| ! | TAACCTTAATTGCCATTTAG+GGG | + | chr1_3:44479897-44479916 | None:intergenic | 30.0% |
| GTAATTAGAAACCAAAACGA+TGG | - | chr1_3:44480000-44480019 | Msa0119950:intron | 30.0% | |
| ! | ACATATATTTGCCATCGTTT+TGG | + | chr1_3:44480014-44480033 | None:intergenic | 30.0% |
| AACTCACTTCATTTCTCTAA+TGG | - | chr1_3:44480069-44480088 | Msa0119950:intron | 30.0% | |
| ACTCACTTCATTTCTCTAAT+GGG | - | chr1_3:44480070-44480089 | Msa0119950:intron | 30.0% | |
| GTACTCTATTACAGGTTATT+TGG | + | chr1_3:44480105-44480124 | None:intergenic | 30.0% | |
| TTTATAAATACAATACGCGG+TGG | - | chr1_3:44480154-44480173 | Msa0119950:intron | 30.0% | |
| TATTCTTCACATACATACTC+TGG | + | chr1_3:44480193-44480212 | None:intergenic | 30.0% | |
| !! | GTACTTTGGAGTAAAATATG+AGG | - | chr1_3:44480223-44480242 | Msa0119950:CDS | 30.0% |
| TGGAGTAAAATATGAGGATT+AGG | - | chr1_3:44480229-44480248 | Msa0119950:CDS | 30.0% | |
| AAGAAGGCAAAATCTATGTT+CGG | + | chr1_3:44480283-44480302 | None:intergenic | 30.0% | |
| ATGTCTTTGCTTAAAAGTCT+TGG | - | chr1_3:44480314-44480333 | Msa0119950:intron | 30.0% | |
| TACAAGTTTAGTAGTATGCA+TGG | - | chr1_3:44480348-44480367 | Msa0119950:intron | 30.0% | |
| CAGAAAGAATGACAATGTAA+AGG | - | chr1_3:44480657-44480676 | Msa0119950:intron | 30.0% | |
| AAAGAATGACAATGTAAAGG+TGG | - | chr1_3:44480660-44480679 | Msa0119950:intron | 30.0% | |
| !!! | TGTGTCTTTTTCAGACAAAT+TGG | - | chr1_3:44480804-44480823 | Msa0119950:intron | 30.0% |
| GTAAAAATATGCTTGATTGG+TGG | - | chr1_3:44481115-44481134 | Msa0119950:intron | 30.0% | |
| !! | AGCCGCTATTTGATTTTATT+AGG | - | chr1_3:44481300-44481319 | Msa0119950:intron | 30.0% |
| !! | AGGAAATTTAGGGTATTTTG+AGG | - | chr1_3:44481320-44481339 | Msa0119950:intron | 30.0% |
| AAACACACTCTTCTATCTTA+TGG | - | chr1_3:44481395-44481414 | Msa0119950:intron | 30.0% | |
| !!! | TGTTCCTGTCTTTTGTTTTT+TGG | - | chr1_3:44481446-44481465 | Msa0119950:intron | 30.0% |
| AACACCAAAAAACAAAAGAC+AGG | + | chr1_3:44481453-44481472 | None:intergenic | 30.0% | |
| TATACCAGTATGACAAATAG+CGG | + | chr1_3:44481621-44481640 | None:intergenic | 30.0% | |
| !! | TTGGTTTTCAGTATAGTTGT+AGG | - | chr1_3:44481719-44481738 | Msa0119950:intron | 30.0% |
| ! | TCTTGAGATAGGTTTTTGTT+AGG | + | chr1_3:44481911-44481930 | None:intergenic | 30.0% |
| GCTTTATAGATTCTTGAGAT+AGG | + | chr1_3:44481922-44481941 | None:intergenic | 30.0% | |
| ! | AAAAACCAGTTTTCTTGTTG+GGG | + | chr1_3:44481999-44482018 | None:intergenic | 30.0% |
| ! | CTCACTTGCAAATAAGTTTT+TGG | + | chr1_3:44482068-44482087 | None:intergenic | 30.0% |
| TTTGCAAGTGAGAATTCTAT+AGG | - | chr1_3:44482076-44482095 | Msa0119950:intron | 30.0% | |
| ! | CTCATTGTTTTCTGATTGAT+AGG | + | chr1_3:44482404-44482423 | None:intergenic | 30.0% |
| CTATCAATCAGAAAACAATG+AGG | - | chr1_3:44482402-44482421 | Msa0119950:intron | 30.0% | |
| GACTTTATGTTACAAACTAG+AGG | - | chr1_3:44482581-44482600 | Msa0119950:CDS | 30.0% | |
| TTACTAGGATTCATGTACAA+TGG | + | chr1_3:44482622-44482641 | None:intergenic | 30.0% | |
| TGTACATGAATCCTAGTAAA+TGG | - | chr1_3:44482623-44482642 | Msa0119950:CDS | 30.0% | |
| TGTGTTTATATTGCTTTGAC+AGG | - | chr1_3:44482840-44482859 | Msa0119950:CDS | 30.0% | |
| ! | GTCTGACATTTTTCTTTGTT+TGG | - | chr1_3:44482998-44483017 | Msa0119950:intron | 30.0% |
| AGTCAATTCATCACCTATTA+AGG | + | chr1_3:44483301-44483320 | None:intergenic | 30.0% | |
| TAAAAGAACCTTAACTGACA+TGG | - | chr1_3:44483341-44483360 | Msa0119950:intron | 30.0% | |
| !!! | CAATTTTGATTTGCCAACTT+AGG | + | chr1_3:44483596-44483615 | None:intergenic | 30.0% |
| ATCTCATCCTTATAATCTAG+TGG | + | chr1_3:44483929-44483948 | None:intergenic | 30.0% | |
| ATACGGAGCAGAAAAATTAA+AGG | + | chr1_3:44484138-44484157 | None:intergenic | 30.0% | |
| ! | TTCTCTCGTTTACATTTTCT+AGG | + | chr1_3:44484193-44484212 | None:intergenic | 30.0% |
| TGTAGATTCAGATGATGAAA+TGG | - | chr1_3:44484558-44484577 | Msa0119950:intron | 30.0% | |
| ACAAAACTTAACATTCTTCC+TGG | - | chr1_3:44484625-44484644 | Msa0119950:intron | 30.0% | |
| ATATTTCTTAGAGAGGAGTT+GGG | - | chr1_3:44484706-44484725 | Msa0119950:intron | 30.0% | |
| GTTGTAAAAGAGATGCAATA+TGG | + | chr1_3:44484896-44484915 | None:intergenic | 30.0% | |
| ! | CTAAATTTTCCACATGACTT+TGG | - | chr1_3:44485316-44485335 | Msa0119950:five_prime_UTR | 30.0% |
| GTTTAAACTTCCTCAAATTC+TGG | - | chr1_3:44485350-44485369 | Msa0119950:five_prime_UTR | 30.0% | |
| TTTCTTCTTCATCCGTTACA+TGG | - | chr1_3:44470098-44470117 | Msa0119950:three_prime_UTR | 35.0% | |
| GAGATTTAACTGCCATGTAA+CGG | + | chr1_3:44470113-44470132 | Msa0119940:intron | 35.0% | |
| AAAGCAGAAGGATAGAGAAA+TGG | + | chr1_3:44470170-44470189 | Msa0119940:intron | 35.0% | |
| !! | GTGTTTGTTCTAGCTTCAAT+TGG | - | chr1_3:44470227-44470246 | Msa0119950:three_prime_UTR | 35.0% |
| !!! | CCCTTTTTTGTAGGTAATTC+AGG | - | chr1_3:44470486-44470505 | Msa0119950:three_prime_UTR | 35.0% |
| CTTTAATCATATACTCGTGG+AGG | + | chr1_3:44470548-44470567 | Msa0119940:CDS | 35.0% | |
| !! | TATCAAATCGACTTGTTGGT+TGG | - | chr1_3:44470601-44470620 | Msa0119950:three_prime_UTR | 35.0% |
| ! | ATAGGACCTATTTTACTGAC+GGG | + | chr1_3:44470693-44470712 | None:intergenic | 35.0% |
| TTCTGCGTTAGTTGAATTAG+TGG | - | chr1_3:44470772-44470791 | Msa0119950:CDS | 35.0% | |
| TGTCGTAGATTCAAATCCTA+AGG | + | chr1_3:44470904-44470923 | None:intergenic | 35.0% | |
| ATGCTAGTCAAATGCATTGT+GGG | + | chr1_3:44471121-44471140 | None:intergenic | 35.0% | |
| ! | TAGGCAAAATCTTCTTTTGG+TGG | - | chr1_3:44471242-44471261 | Msa0119950:intron | 35.0% |
| TGATTCTATGATTATGGTCG+CGG | - | chr1_3:44471294-44471313 | Msa0119950:intron | 35.0% | |
| GGTGTAAGAAAAACTCAGAT+TGG | - | chr1_3:44471735-44471754 | Msa0119950:intron | 35.0% | |
| TTGGAGAAGAATATTGTCTG+TGG | - | chr1_3:44471754-44471773 | Msa0119950:intron | 35.0% | |
| TGGAGAAGAATATTGTCTGT+GGG | - | chr1_3:44471755-44471774 | Msa0119950:intron | 35.0% | |
| AGCAACTTATGACATGTTCA+TGG | - | chr1_3:44472033-44472052 | Msa0119950:CDS | 35.0% | |
| CTATAAGTGCTTAGCTAATC+TGG | - | chr1_3:44472273-44472292 | Msa0119950:intron | 35.0% | |
| GCTAATCTGGTTATTCAAAC+AGG | - | chr1_3:44472286-44472305 | Msa0119950:intron | 35.0% | |
| TGCCCCATTTACTAAATAGT+AGG | + | chr1_3:44472495-44472514 | None:intergenic | 35.0% | |
| !!! | CATTTTTTCAAGGTTAGCAC+TGG | + | chr1_3:44472692-44472711 | None:intergenic | 35.0% |
| GTGCTAACCTTGAAAAAATG+AGG | - | chr1_3:44472692-44472711 | Msa0119950:intron | 35.0% | |
| !! | TTGCTGTTTAAACACCAACA+AGG | + | chr1_3:44473114-44473133 | None:intergenic | 35.0% |
| GTGTTTAAACAGCAATGTTC+AGG | - | chr1_3:44473119-44473138 | Msa0119950:intron | 35.0% | |
| AGCAATGTTCAGGTAGTTAT+TGG | - | chr1_3:44473129-44473148 | Msa0119950:intron | 35.0% | |
| ACATAATACCAACTCATCTG+CGG | - | chr1_3:44473212-44473231 | Msa0119950:intron | 35.0% | |
| !! | AACTGAAAGGCATTACTTTG+TGG | - | chr1_3:44473354-44473373 | Msa0119950:intron | 35.0% |
| CCATTACATCACTACTGAAT+TGG | + | chr1_3:44473411-44473430 | None:intergenic | 35.0% | |
| CCAATTCAGTAGTGATGTAA+TGG | - | chr1_3:44473408-44473427 | Msa0119950:intron | 35.0% | |
| CACATTGATAAGCAGTTATG+TGG | + | chr1_3:44473458-44473477 | None:intergenic | 35.0% | |
| CATAACTGCTTATCAATGTG+CGG | - | chr1_3:44473458-44473477 | Msa0119950:intron | 35.0% | |
| TCCTAATTAAGTAGGTCCTT+TGG | - | chr1_3:44473527-44473546 | Msa0119950:intron | 35.0% | |
| TTGTTTGAAAACTCGGTATC+TGG | + | chr1_3:44473553-44473572 | None:intergenic | 35.0% | |
| GACAGCTTCTCAATGATAAT+GGG | + | chr1_3:44473720-44473739 | None:intergenic | 35.0% | |
| TGACAGCTTCTCAATGATAA+TGG | + | chr1_3:44473721-44473740 | None:intergenic | 35.0% | |
| CAGTTATTAAATGTCCAGCT+TGG | - | chr1_3:44473739-44473758 | Msa0119950:intron | 35.0% | |
| GTTATTAAATGTCCAGCTTG+GGG | - | chr1_3:44473741-44473760 | Msa0119950:intron | 35.0% | |
| ! | ATCAGTCTAGGTTGAATGTT+AGG | + | chr1_3:44473978-44473997 | None:intergenic | 35.0% |
| ACCTAGACTGATAGTATAAC+TGG | - | chr1_3:44473986-44474005 | Msa0119950:intron | 35.0% | |
| ACCAGTTATACTATCAGTCT+AGG | + | chr1_3:44473990-44474009 | None:intergenic | 35.0% | |
| ! | CTTTCAGTATTGAAACGTCT+CGG | - | chr1_3:44474061-44474080 | Msa0119950:intron | 35.0% |
| CAAAAGTCTATGCAAATTCG+TGG | - | chr1_3:44474118-44474137 | Msa0119950:intron | 35.0% | |
| !!! | CCGTTGGTTTGTTTTTTATC+TGG | + | chr1_3:44474300-44474319 | None:intergenic | 35.0% |
| GATACTGGTATCTATTTGAG+TGG | - | chr1_3:44474415-44474434 | Msa0119950:intron | 35.0% | |
| ! | CTTCTGCATTTGAAACTCAA+GGG | + | chr1_3:44474488-44474507 | None:intergenic | 35.0% |
| ! | ACTTCTGCATTTGAAACTCA+AGG | + | chr1_3:44474489-44474508 | None:intergenic | 35.0% |
| TTGAGTTTCAAATGCAGAAG+TGG | - | chr1_3:44474488-44474507 | Msa0119950:CDS | 35.0% | |
| ! | TGTTCAAGTTAGAACGAGTA+TGG | - | chr1_3:44474818-44474837 | Msa0119950:intron | 35.0% |
| ! | AGATTTGAGGTAGCCAAATA+TGG | + | chr1_3:44474870-44474889 | None:intergenic | 35.0% |
| TTCTATCTCTGCTATCATCT+CGG | + | chr1_3:44475137-44475156 | None:intergenic | 35.0% | |
| GCAACATTTACACAAGTTTC+AGG | + | chr1_3:44475708-44475727 | None:intergenic | 35.0% | |
| GTTAATAAGTTTGAAGGGGA+CGG | - | chr1_3:44475856-44475875 | Msa0119950:CDS | 35.0% | |
| TTAATAAGTTTGAAGGGGAC+GGG | - | chr1_3:44475857-44475876 | Msa0119950:CDS | 35.0% | |
| ATTGCTGCAATTGCTAAACT+TGG | - | chr1_3:44476088-44476107 | Msa0119950:intron | 35.0% | |
| TGAGATAACTGGTAGTTTGA+TGG | - | chr1_3:44476153-44476172 | Msa0119950:intron | 35.0% | |
| !!! | TTTTAGAGCTAACGTTGAGT+GGG | - | chr1_3:44476279-44476298 | Msa0119950:CDS | 35.0% |
| !! | GTTCAGAAGAGGTTATTTTC+TGG | - | chr1_3:44476302-44476321 | Msa0119950:intron | 35.0% |
| !! | GGTTATTTTCTGGGTAAATC+TGG | - | chr1_3:44476312-44476331 | Msa0119950:intron | 35.0% |
| !!! | ATGTTCAGTTTTGAAGACAC+TGG | - | chr1_3:44476416-44476435 | Msa0119950:intron | 35.0% |
| !!! | AGTTTTGAAGACACTGGTTT+TGG | - | chr1_3:44476422-44476441 | Msa0119950:intron | 35.0% |
| TGATGTTGGATTGAATGTCA+AGG | - | chr1_3:44476456-44476475 | Msa0119950:intron | 35.0% | |
| AATCATTTCTATCCCTAGTG+GGG | + | chr1_3:44476766-44476785 | None:intergenic | 35.0% | |
| GCTTCAATTGAATGTTACCA+TGG | - | chr1_3:44476960-44476979 | Msa0119950:intron | 35.0% | |
| GAGAAGGATTTGGCTATATT+TGG | - | chr1_3:44476994-44477013 | Msa0119950:intron | 35.0% | |
| ! | CGAACATTTCTTTTGGCAAA+TGG | - | chr1_3:44477045-44477064 | Msa0119950:intron | 35.0% |
| !! | GGAGTGTCATGAATAGATTT+TGG | - | chr1_3:44477166-44477185 | Msa0119950:intron | 35.0% |
| !! | GATAAAAGTGCTTAAGTTGC+AGG | + | chr1_3:44477294-44477313 | None:intergenic | 35.0% |
| ! | AACTAATGGATGAGAGTTGT+GGG | + | chr1_3:44477421-44477440 | None:intergenic | 35.0% |
| !! | CATTTGCTGTTTGCTCTTAT+TGG | - | chr1_3:44477662-44477681 | Msa0119950:CDS | 35.0% |
| !!! | TCAGCTGCTTTTACATTTGA+AGG | + | chr1_3:44477727-44477746 | None:intergenic | 35.0% |
| TCAGCAACATCATGTTCATT+TGG | - | chr1_3:44478026-44478045 | Msa0119950:intron | 35.0% | |
| TATATAAAACGGCTACACGT+GGG | + | chr1_3:44478126-44478145 | None:intergenic | 35.0% | |
| TTATATAAAACGGCTACACG+TGG | + | chr1_3:44478127-44478146 | None:intergenic | 35.0% | |
| !! | CGTGTAGCCGTTTTATATAA+TGG | - | chr1_3:44478127-44478146 | Msa0119950:intron | 35.0% |
| TTACCACTACAGCTGTTATT+TGG | + | chr1_3:44478174-44478193 | None:intergenic | 35.0% | |
| ! | CAACCATGAATGCCAATTTT+GGG | + | chr1_3:44478223-44478242 | None:intergenic | 35.0% |
| ! | ACAACCATGAATGCCAATTT+TGG | + | chr1_3:44478224-44478243 | None:intergenic | 35.0% |
| TGGTTGTTCTTGTCTTAATG+TGG | - | chr1_3:44478295-44478314 | Msa0119950:CDS | 35.0% | |
| CTCAATACGAAATTCGAAAC+TGG | - | chr1_3:44478376-44478395 | Msa0119950:intron | 35.0% | |
| ! | TTGGTGGATACTTCTTTCTA+CGG | - | chr1_3:44478426-44478445 | Msa0119950:intron | 35.0% |
| ! | CATGGCTACTCTAAAAAAGA+TGG | - | chr1_3:44478478-44478497 | Msa0119950:intron | 35.0% |
| AAAGTCCATACAATCCTTTC+AGG | - | chr1_3:44478622-44478641 | Msa0119950:intron | 35.0% | |
| CATTTCCTGAAAGGATTGTA+TGG | + | chr1_3:44478630-44478649 | None:intergenic | 35.0% | |
| ACAGTACAAGACAATTAGCT+TGG | + | chr1_3:44478868-44478887 | None:intergenic | 35.0% | |
| AAGCTAATTGTCTTGTACTG+TGG | - | chr1_3:44478867-44478886 | Msa0119950:intron | 35.0% | |
| ATAATAGGTGGCACAATGAT+TGG | + | chr1_3:44478995-44479014 | None:intergenic | 35.0% | |
| GATGCCAAGAAAATAGTTGA+CGG | - | chr1_3:44479053-44479072 | Msa0119950:CDS | 35.0% | |
| ATGCCAAGAAAATAGTTGAC+GGG | - | chr1_3:44479054-44479073 | Msa0119950:CDS | 35.0% | |
| TCAGTCAACGATAAAAGACT+CGG | - | chr1_3:44479091-44479110 | Msa0119950:CDS | 35.0% | |
| AATACACTACTGAAATGGAG+AGG | + | chr1_3:44479177-44479196 | None:intergenic | 35.0% | |
| TAAGAAAGAAGCTGAATTCC+TGG | - | chr1_3:44479475-44479494 | Msa0119950:CDS | 35.0% | |
| CACACTATTATACCAGGAAT+TGG | + | chr1_3:44479580-44479599 | None:intergenic | 35.0% | |
| CTTTGACACACTATTATACC+AGG | + | chr1_3:44479586-44479605 | None:intergenic | 35.0% | |
| ! | CTGAAAGTGGGAATCTTTTT+CGG | - | chr1_3:44479677-44479696 | Msa0119950:intron | 35.0% |
| TTCAGGACACAATTATTTGG+AGG | + | chr1_3:44479709-44479728 | None:intergenic | 35.0% | |
| GATTGACTGATCAACATAAC+AGG | - | chr1_3:44479750-44479769 | Msa0119950:intron | 35.0% | |
| CCAGATAATAATCAGTGATG+GGG | - | chr1_3:44479780-44479799 | Msa0119950:intron | 35.0% | |
| ! | ATGGGGTTTGATAATAACGT+AGG | - | chr1_3:44479797-44479816 | Msa0119950:intron | 35.0% |
| AAAACAAATTGGCCCCTAAA+TGG | - | chr1_3:44479882-44479901 | Msa0119950:intron | 35.0% | |
| ! | GTCTCGAAAGATTAATTTGG+TGG | - | chr1_3:44479926-44479945 | Msa0119950:intron | 35.0% |
| ! | CGAAAGATTAATTTGGTGGA+TGG | - | chr1_3:44479930-44479949 | Msa0119950:intron | 35.0% |
| TAGCCATTAGGTTAATAAGC+GGG | + | chr1_3:44480127-44480146 | None:intergenic | 35.0% | |
| GTAGCCATTAGGTTAATAAG+CGG | + | chr1_3:44480128-44480147 | None:intergenic | 35.0% | |
| ACAAATGTAAAGGGGATGAA+GGG | + | chr1_3:44480257-44480276 | None:intergenic | 35.0% | |
| AACAAATGTAAAGGGGATGA+AGG | + | chr1_3:44480258-44480277 | None:intergenic | 35.0% | |
| AGAAGGCAAAATCTATGTTC+GGG | + | chr1_3:44480282-44480301 | None:intergenic | 35.0% | |
| !!! | TTGTTGTTTGCGTTTTTCCA+TGG | - | chr1_3:44480374-44480393 | Msa0119950:intron | 35.0% |
| ACTGAATATTTGCTTGCCAA+TGG | - | chr1_3:44480547-44480566 | Msa0119950:intron | 35.0% | |
| !! | GAGTTTAATAGAAGCACCAT+TGG | + | chr1_3:44480566-44480585 | None:intergenic | 35.0% |
| TGCTTCTATTAAACTCATGC+AGG | - | chr1_3:44480570-44480589 | Msa0119950:intron | 35.0% | |
| GCTTCTATTAAACTCATGCA+GGG | - | chr1_3:44480571-44480590 | Msa0119950:intron | 35.0% | |
| !! | TCTGGTTAGCTCTATGTAAA+TGG | - | chr1_3:44480771-44480790 | Msa0119950:intron | 35.0% |
| AGACAAATTGGAAAATCTCG+TGG | - | chr1_3:44480816-44480835 | Msa0119950:intron | 35.0% | |
| ATCAACATCGTCAAATGATG+AGG | + | chr1_3:44480923-44480942 | None:intergenic | 35.0% | |
| GTATATGCTATTCCACCTTT+GGG | - | chr1_3:44481636-44481655 | Msa0119950:intron | 35.0% | |
| TATATGCTATTCCACCTTTG+GGG | - | chr1_3:44481637-44481656 | Msa0119950:intron | 35.0% | |
| ! | GTTTTCAGTATAGTTGTAGG+TGG | - | chr1_3:44481722-44481741 | Msa0119950:intron | 35.0% |
| CTCCACTTTACGAATAATGA+GGG | + | chr1_3:44482031-44482050 | None:intergenic | 35.0% | |
| CCAGTTTATGCGTGATTATT+AGG | + | chr1_3:44482142-44482161 | None:intergenic | 35.0% | |
| CCTAATAATCACGCATAAAC+TGG | - | chr1_3:44482139-44482158 | Msa0119950:intron | 35.0% | |
| TCAAAGCGAAGGATTTCATT+GGG | + | chr1_3:44482331-44482350 | None:intergenic | 35.0% | |
| TTTGAATTAGACGACTCACA+AGG | - | chr1_3:44482438-44482457 | Msa0119950:intron | 35.0% | |
| !!! | AGACCTTTTTCAAGTGAAGT+GGG | + | chr1_3:44482547-44482566 | None:intergenic | 35.0% |
| GCTAAAGCAGTCAATACAAA+TGG | + | chr1_3:44482792-44482811 | None:intergenic | 35.0% | |
| ! | GATTTGATGATCAGTGATGA+TGG | - | chr1_3:44482862-44482881 | Msa0119950:CDS | 35.0% |
| CAAACTAAAAGAAACGGGAA+CGG | - | chr1_3:44482966-44482985 | Msa0119950:intron | 35.0% | |
| ACTCATCTGCTTTATGACAT+TGG | - | chr1_3:44483042-44483061 | Msa0119950:intron | 35.0% | |
| AATAAACAGGATGTCTTGCA+AGG | - | chr1_3:44483222-44483241 | Msa0119950:intron | 35.0% | |
| !! | CAACTTCTTGCTATTGATGT+TGG | - | chr1_3:44483249-44483268 | Msa0119950:intron | 35.0% |
| TTGGTCAAAAGGACCTTAAT+AGG | - | chr1_3:44483285-44483304 | Msa0119950:intron | 35.0% | |
| !! | AGAAGCATTAAAATGCCGAT+AGG | + | chr1_3:44483378-44483397 | None:intergenic | 35.0% |
| !! | CATAAAGGTGTTCAACTTAC+AGG | + | chr1_3:44483402-44483421 | None:intergenic | 35.0% |
| CTGAATAATATGTCCTGTTC+TGG | - | chr1_3:44483442-44483461 | Msa0119950:intron | 35.0% | |
| ! | AATCACGTCTTGTTCAAACA+TGG | - | chr1_3:44483535-44483554 | Msa0119950:intron | 35.0% |
| ! | ATCACGTCTTGTTCAAACAT+GGG | - | chr1_3:44483536-44483555 | Msa0119950:intron | 35.0% |
| CAAAGATGTAGTAGACCTTA+AGG | - | chr1_3:44483809-44483828 | Msa0119950:intron | 35.0% | |
| GAAAAAAAGGAAGGAGTAAG+TGG | - | chr1_3:44483873-44483892 | Msa0119950:intron | 35.0% | |
| CCTTATAATCTAGTGGTCAT+GGG | + | chr1_3:44483922-44483941 | None:intergenic | 35.0% | |
| TCCTTATAATCTAGTGGTCA+TGG | + | chr1_3:44483923-44483942 | None:intergenic | 35.0% | |
| GTACATTGTCCTTGTATACA+TGG | + | chr1_3:44484075-44484094 | None:intergenic | 35.0% | |
| GCTCCGTATAAATATTGAAG+TGG | - | chr1_3:44484149-44484168 | Msa0119950:intron | 35.0% | |
| TGTAAACGAGAGAAGATAGA+AGG | - | chr1_3:44484199-44484218 | Msa0119950:intron | 35.0% | |
| ! | GGAAAATGTTTTCTTCACAC+AGG | - | chr1_3:44484284-44484303 | Msa0119950:intron | 35.0% |
| CATAATGTTTATACCAGGGA+TGG | + | chr1_3:44484360-44484379 | None:intergenic | 35.0% | |
| ATCATCTGAATCTACATCAC+TGG | + | chr1_3:44484554-44484573 | None:intergenic | 35.0% | |
| GATTCAGATGATGAAATGGA+TGG | - | chr1_3:44484562-44484581 | Msa0119950:intron | 35.0% | |
| ATGGATGGAGTTAAATGATC+AGG | - | chr1_3:44484577-44484596 | Msa0119950:intron | 35.0% | |
| TGATGCCATATTTCTTAGAG+AGG | - | chr1_3:44484699-44484718 | Msa0119950:intron | 35.0% | |
| ! | CAACTCCTCTCTAAGAAATA+TGG | + | chr1_3:44484707-44484726 | None:intergenic | 35.0% |
| CATATTTCTTAGAGAGGAGT+TGG | - | chr1_3:44484705-44484724 | Msa0119950:intron | 35.0% | |
| TCACATATCTTTCGGAATTG+AGG | + | chr1_3:44484847-44484866 | None:intergenic | 35.0% | |
| AAAATTGAGCCAAAGTCATG+TGG | + | chr1_3:44485328-44485347 | None:intergenic | 35.0% | |
| GCGTGGTCGAAAACAAAAAA+TGG | + | chr1_3:44469990-44470009 | Msa0119940:intron | 40.0% | |
| GAGTGAAATAGAGAAGGAAG+AGG | + | chr1_3:44470015-44470034 | Msa0119940:intron | 40.0% | |
| !! | CTATCCTTCTGCTTTGTTTC+AGG | - | chr1_3:44470175-44470194 | Msa0119950:three_prime_UTR | 40.0% |
| !! | GTTTCAGGTTCGAATATCTC+TGG | - | chr1_3:44470190-44470209 | Msa0119950:three_prime_UTR | 40.0% |
| ! | CAATTGGCTTCGTTAGTAGA+CGG | - | chr1_3:44470243-44470262 | Msa0119950:three_prime_UTR | 40.0% |
| ! | TTGTTTAGAGCTCGAGTAAC+CGG | - | chr1_3:44470639-44470658 | Msa0119950:three_prime_UTR | 40.0% |
| GTAGTTCCCGTCAGTAAAAT+AGG | - | chr1_3:44470684-44470703 | Msa0119950:three_prime_UTR | 40.0% | |
| AAAATGGGTAGGTTGCTAGA+AGG | - | chr1_3:44470817-44470836 | Msa0119950:CDS | 40.0% | |
| TCAATCTAAGAAGAATGGGG+TGG | - | chr1_3:44470869-44470888 | Msa0119950:intron | 40.0% | |
| CAATCTAAGAAGAATGGGGT+GGG | - | chr1_3:44470870-44470889 | Msa0119950:intron | 40.0% | |
| AGGATTTGAATCTACGACAC+TGG | - | chr1_3:44470905-44470924 | Msa0119950:intron | 40.0% | |
| GGATTTGAATCTACGACACT+GGG | - | chr1_3:44470906-44470925 | Msa0119950:intron | 40.0% | |
| CATGCTAGTCAAATGCATTG+TGG | + | chr1_3:44471122-44471141 | None:intergenic | 40.0% | |
| CACAATGCATTTGACTAGCA+TGG | - | chr1_3:44471120-44471139 | Msa0119950:intron | 40.0% | |
| TTATGGCATGTTCATGCCAT+AGG | - | chr1_3:44471968-44471987 | Msa0119950:CDS | 40.0% | |
| ATAAGCTATACTGGAGCTTG+TGG | + | chr1_3:44472160-44472179 | None:intergenic | 40.0% | |
| ATTCGAAAGGCAGCAATTTG+AGG | + | chr1_3:44472431-44472450 | None:intergenic | 40.0% | |
| TCAAATTGCTGCCTTTCGAA+TGG | - | chr1_3:44472430-44472449 | Msa0119950:CDS | 40.0% | |
| ! | TAGTGTAGGGAGAAAAGTGT+CGG | - | chr1_3:44472459-44472478 | Msa0119950:CDS | 40.0% |
| TAAATGGGGCAGTTCAAGAA+AGG | - | chr1_3:44472504-44472523 | Msa0119950:intron | 40.0% | |
| AAATGGGGCAGTTCAAGAAA+GGG | - | chr1_3:44472505-44472524 | Msa0119950:intron | 40.0% | |
| ! | CATGATTTGTCTTTGAGCAG+TGG | - | chr1_3:44472541-44472560 | Msa0119950:intron | 40.0% |
| ! | GATGATGGTATGACTGTCAA+CGG | - | chr1_3:44472649-44472668 | Msa0119950:intron | 40.0% |
| ATGATGGTATGACTGTCAAC+GGG | - | chr1_3:44472650-44472669 | Msa0119950:intron | 40.0% | |
| ! | AAGCTTTATATGATGCAGCC+AGG | - | chr1_3:44472767-44472786 | Msa0119950:intron | 40.0% |
| ! | AGCTTTATATGATGCAGCCA+GGG | - | chr1_3:44472768-44472787 | Msa0119950:intron | 40.0% |
| ! | ATCCACGTGATGACGATTTA+TGG | + | chr1_3:44472816-44472835 | None:intergenic | 40.0% |
| ATAGGAGACAACCTTTGTGA+TGG | - | chr1_3:44472993-44473012 | Msa0119950:CDS | 40.0% | |
| AGAACAACATGCCATCACAA+AGG | + | chr1_3:44473007-44473026 | None:intergenic | 40.0% | |
| CACGCTAGATGAACTGTAAA+AGG | - | chr1_3:44473058-44473077 | Msa0119950:intron | 40.0% | |
| TTAAGTTACCGCAGATGAGT+TGG | + | chr1_3:44473223-44473242 | None:intergenic | 40.0% | |
| GCCAAAGGACCTACTTAATT+AGG | + | chr1_3:44473531-44473550 | None:intergenic | 40.0% | |
| TACACTAAATTACCCCAAGC+TGG | + | chr1_3:44473756-44473775 | None:intergenic | 40.0% | |
| GAAGGGAAGGATTTAAACTG+AGG | - | chr1_3:44474336-44474355 | Msa0119950:intron | 40.0% | |
| GTGGGTTTGATCTTCAAATG+CGG | - | chr1_3:44474434-44474453 | Msa0119950:intron | 40.0% | |
| TGGGTTTGATCTTCAAATGC+GGG | - | chr1_3:44474435-44474454 | Msa0119950:intron | 40.0% | |
| TGCGGGAAAAATAAAAGCAG+AGG | - | chr1_3:44474452-44474471 | Msa0119950:CDS | 40.0% | |
| GCGGGAAAAATAAAAGCAGA+GGG | - | chr1_3:44474453-44474472 | Msa0119950:CDS | 40.0% | |
| TGTTCGAACGTAGAAAGCAA+GGG | - | chr1_3:44474539-44474558 | Msa0119950:intron | 40.0% | |
| GAGACTGAGTTAGCCATATT+TGG | - | chr1_3:44474854-44474873 | Msa0119950:intron | 40.0% | |
| TCTATCTCTGCTATCATCTC+GGG | + | chr1_3:44475136-44475155 | None:intergenic | 40.0% | |
| ! | GATGAATAGTTTCGGGTACA+TGG | + | chr1_3:44475290-44475309 | None:intergenic | 40.0% |
| CGAGCGAATCAAATATTGGA+AGG | + | chr1_3:44475596-44475615 | None:intergenic | 40.0% | |
| TCTCTGATTAAGCTCTCCAA+GGG | + | chr1_3:44475760-44475779 | None:intergenic | 40.0% | |
| TTCTCTGATTAAGCTCTCCA+AGG | + | chr1_3:44475761-44475780 | None:intergenic | 40.0% | |
| CAAAACCATTCGTACACTTC+AGG | + | chr1_3:44475802-44475821 | None:intergenic | 40.0% | |
| ! | CTGAAGTGTACGAATGGTTT+TGG | - | chr1_3:44475800-44475819 | Msa0119950:intron | 40.0% |
| ! | TGTGAGCAAGAAACTTTTGC+CGG | + | chr1_3:44476115-44476134 | None:intergenic | 40.0% |
| !!! | CTTTTAGAGCTAACGTTGAG+TGG | - | chr1_3:44476278-44476297 | Msa0119950:CDS | 40.0% |
| ! | TTTAGAGCTAACGTTGAGTG+GGG | - | chr1_3:44476280-44476299 | Msa0119950:CDS | 40.0% |
| !! | GACAACATCTGAAAGCATTG+AGG | - | chr1_3:44476387-44476406 | Msa0119950:intron | 40.0% |
| GACATTCAATCCAACATCAC+CGG | + | chr1_3:44476455-44476474 | None:intergenic | 40.0% | |
| TCATTACTTTCTACCCCACT+AGG | - | chr1_3:44476750-44476769 | Msa0119950:intron | 40.0% | |
| CATTACTTTCTACCCCACTA+GGG | - | chr1_3:44476751-44476770 | Msa0119950:intron | 40.0% | |
| TTAAGCATATTCCTCCATGC+TGG | + | chr1_3:44476797-44476816 | None:intergenic | 40.0% | |
| ATTGAATGTTACCATGGTGC+AGG | - | chr1_3:44476966-44476985 | Msa0119950:intron | 40.0% | |
| ! | CTTTTGGCAAATGGTTTCGA+TGG | - | chr1_3:44477054-44477073 | Msa0119950:intron | 40.0% |
| CTAGTTGTACTGCTAGCATT+TGG | - | chr1_3:44477200-44477219 | Msa0119950:intron | 40.0% | |
| ! | GAACTAATGGATGAGAGTTG+TGG | + | chr1_3:44477422-44477441 | None:intergenic | 40.0% |
| GGGAAGTTCTTTAACTGCAT+AGG | - | chr1_3:44477522-44477541 | Msa0119950:intron | 40.0% | |
| ! | ATAGGTAGTTTGTGAAGAGC+TGG | - | chr1_3:44477540-44477559 | Msa0119950:intron | 40.0% |
| ! | TAGTTTGTGAAGAGCTGGAT+TGG | - | chr1_3:44477545-44477564 | Msa0119950:intron | 40.0% |
| !!! | GGATTGGCTTCCTTTTTATC+CGG | - | chr1_3:44477561-44477580 | Msa0119950:intron | 40.0% |
| !!! | GATTGGCTTCCTTTTTATCC+GGG | - | chr1_3:44477562-44477581 | Msa0119950:intron | 40.0% |
| ! | ATGAGACTGTTTTGTGATGC+TGG | + | chr1_3:44477593-44477612 | None:intergenic | 40.0% |
| AGCATCACAAAACAGTCTCA+TGG | - | chr1_3:44477592-44477611 | Msa0119950:CDS | 40.0% | |
| CATGGTCATAGTAAACCAGA+AGG | - | chr1_3:44477610-44477629 | Msa0119950:CDS | 40.0% | |
| AGAGCAAACAGCAAATGCTT+GGG | + | chr1_3:44477659-44477678 | None:intergenic | 40.0% | |
| AAGAGCAAACAGCAAATGCT+TGG | + | chr1_3:44477660-44477679 | None:intergenic | 40.0% | |
| ! | TGTTAGGCACAACAAGTTGA+TGG | - | chr1_3:44477841-44477860 | Msa0119950:intron | 40.0% |
| GAATATGCACATGCACCTAA+TGG | + | chr1_3:44477939-44477958 | None:intergenic | 40.0% | |
| ! | TGTTATTTGGCTGTTGTTGG+CGG | + | chr1_3:44478161-44478180 | None:intergenic | 40.0% |
| ! | AGCTGTTATTTGGCTGTTGT+TGG | + | chr1_3:44478164-44478183 | None:intergenic | 40.0% |
| ACAGCTGTAGTGGTAAAGTT+CGG | - | chr1_3:44478178-44478197 | Msa0119950:intron | 40.0% | |
| TAGTCATTCCAGCCCAAAAT+TGG | - | chr1_3:44478208-44478227 | Msa0119950:intron | 40.0% | |
| GGAGGATTGTCAAACATTCA+TGG | - | chr1_3:44478275-44478294 | Msa0119950:CDS | 40.0% | |
| ! | TCCTACAAATGCTCTTTTGG+TGG | - | chr1_3:44478410-44478429 | Msa0119950:intron | 40.0% |
| !! | TCCACCAAAAGAGCATTTGT+AGG | + | chr1_3:44478414-44478433 | None:intergenic | 40.0% |
| AGCCTCTAGATTCAACTCTT+GGG | + | chr1_3:44478523-44478542 | None:intergenic | 40.0% | |
| TAGCCTCTAGATTCAACTCT+TGG | + | chr1_3:44478524-44478543 | None:intergenic | 40.0% | |
| ACCTCTCTAATATGTGACTC+TGG | - | chr1_3:44478684-44478703 | Msa0119950:intron | 40.0% | |
| !!! | TGGAAACATTTTTTCTGCCG+TGG | + | chr1_3:44478848-44478867 | None:intergenic | 40.0% |
| ! | TTGCCCGTCAACTATTTTCT+TGG | + | chr1_3:44479060-44479079 | None:intergenic | 40.0% |
| CAGTCAACGATAAAAGACTC+GGG | - | chr1_3:44479092-44479111 | Msa0119950:CDS | 40.0% | |
| AGGCATGAAGATGTCAGATT+AGG | + | chr1_3:44479204-44479223 | None:intergenic | 40.0% | |
| GGTTGTGGATGATATTGTAG+AGG | + | chr1_3:44479550-44479569 | None:intergenic | 40.0% | |
| ATACCAGGAATTGGTAAAGG+AGG | + | chr1_3:44479571-44479590 | None:intergenic | 40.0% | |
| CGAAAAAGATTCCCACTTTC+AGG | + | chr1_3:44479679-44479698 | None:intergenic | 40.0% | |
| ACTGATCAACATAACAGGGA+TGG | - | chr1_3:44479755-44479774 | Msa0119950:intron | 40.0% | |
| ! | CCCCATCACTGATTATTATC+TGG | + | chr1_3:44479783-44479802 | None:intergenic | 40.0% |
| ATAAGCGGGTACTCTATTAC+AGG | + | chr1_3:44480113-44480132 | None:intergenic | 40.0% | |
| GTACCCGCTTATTAACCTAA+TGG | - | chr1_3:44480121-44480140 | Msa0119950:intron | 40.0% | |
| TTCGGGGAACAAATGTAAAG+GGG | + | chr1_3:44480265-44480284 | None:intergenic | 40.0% | |
| GTTCGGGGAACAAATGTAAA+GGG | + | chr1_3:44480266-44480285 | None:intergenic | 40.0% | |
| TGTTCGGGGAACAAATGTAA+AGG | + | chr1_3:44480267-44480286 | None:intergenic | 40.0% | |
| GAAGGCAAAATCTATGTTCG+GGG | + | chr1_3:44480281-44480300 | None:intergenic | 40.0% | |
| ! | GACATAAAACTGGCTCAAGA+AGG | + | chr1_3:44480299-44480318 | None:intergenic | 40.0% |
| TAGTGATCAAACCATCACAC+CGG | - | chr1_3:44480600-44480619 | Msa0119950:intron | 40.0% | |
| AGGAGGACAGGTTTATGAAA+GGG | - | chr1_3:44480629-44480648 | Msa0119950:intron | 40.0% | |
| ATGACAATGTAAAGGTGGAC+AGG | - | chr1_3:44480665-44480684 | Msa0119950:intron | 40.0% | |
| TTGGAAAATCTCGTGGATTC+TGG | - | chr1_3:44480823-44480842 | Msa0119950:intron | 40.0% | |
| AAATCAAATAGCGGCTGAAG+CGG | + | chr1_3:44481296-44481315 | None:intergenic | 40.0% | |
| ! | AGATAGAAGAGTGTGTTTCG+CGG | + | chr1_3:44481393-44481412 | None:intergenic | 40.0% |
| GGTATATGCTATTCCACCTT+TGG | - | chr1_3:44481635-44481654 | Msa0119950:intron | 40.0% | |
| GTTTCTCGTTGCATCTTTAC+AGG | + | chr1_3:44481784-44481803 | None:intergenic | 40.0% | |
| GTTAGTAGTGTGCTTTAGTC+AGG | - | chr1_3:44481812-44481831 | Msa0119950:intron | 40.0% | |
| ! | GGTTAGTTACGAACTGGATT+TGG | - | chr1_3:44481844-44481863 | Msa0119950:intron | 40.0% |
| CACTTTACGAATAATGAGGG+AGG | + | chr1_3:44482028-44482047 | None:intergenic | 40.0% | |
| CTCCCTCATTATTCGTAAAG+TGG | - | chr1_3:44482026-44482045 | Msa0119950:intron | 40.0% | |
| CCTCCACTTTACGAATAATG+AGG | + | chr1_3:44482032-44482051 | None:intergenic | 40.0% | |
| CCTCATTATTCGTAAAGTGG+AGG | - | chr1_3:44482029-44482048 | Msa0119950:intron | 40.0% | |
| CATAAACTGGAACAGAACAG+TGG | - | chr1_3:44482152-44482171 | Msa0119950:intron | 40.0% | |
| GTTCATTTCGTTTAGCTGCA+TGG | - | chr1_3:44482174-44482193 | Msa0119950:intron | 40.0% | |
| GAAGGATTTCATTGGGTTCT+TGG | + | chr1_3:44482324-44482343 | None:intergenic | 40.0% | |
| CTCAAAGCGAAGGATTTCAT+TGG | + | chr1_3:44482332-44482351 | None:intergenic | 40.0% | |
| TTCTTAGAAGCTCAAAGCGA+AGG | + | chr1_3:44482342-44482361 | None:intergenic | 40.0% | |
| ! | GCTTCTAAGAAATGAGCTGA+TGG | - | chr1_3:44482351-44482370 | Msa0119950:intron | 40.0% |
| AGCTGATGGAACTTGAGAAA+AGG | - | chr1_3:44482365-44482384 | Msa0119950:intron | 40.0% | |
| GCTGATGGAACTTGAGAAAA+GGG | - | chr1_3:44482366-44482385 | Msa0119950:intron | 40.0% | |
| CTGATTGATAGGCACTTCTT+TGG | + | chr1_3:44482393-44482412 | None:intergenic | 40.0% | |
| ! | TTTCAAGTGAAGTGGGCATT+AGG | + | chr1_3:44482540-44482559 | None:intergenic | 40.0% |
| ATGCCCACTTCACTTGAAAA+AGG | - | chr1_3:44482541-44482560 | Msa0119950:CDS | 40.0% | |
| !!! | CAGACCTTTTTCAAGTGAAG+TGG | + | chr1_3:44482548-44482567 | None:intergenic | 40.0% |
| AAAAGACATGGAATAGGGTG+AGG | + | chr1_3:44483092-44483111 | None:intergenic | 40.0% | |
| AGGTGATGAATTGACTGAGA+AGG | - | chr1_3:44483305-44483324 | Msa0119950:intron | 40.0% | |
| AACTGAAGCCATGTCAGTTA+AGG | + | chr1_3:44483352-44483371 | None:intergenic | 40.0% | |
| ATGGCTTCAGTTGTTCCTAT+CGG | - | chr1_3:44483360-44483379 | Msa0119950:intron | 40.0% | |
| !! | GAGTGTTGGTCAAATGAATC+AGG | + | chr1_3:44483574-44483593 | None:intergenic | 40.0% |
| TTTGACCAACACTCCTAAGT+TGG | - | chr1_3:44483580-44483599 | Msa0119950:intron | 40.0% | |
| ! | ATTTGCCAACTTAGGAGTGT+TGG | + | chr1_3:44483588-44483607 | None:intergenic | 40.0% |
| GTGCATGCTTCCAACATAAA+TGG | - | chr1_3:44483680-44483699 | Msa0119950:intron | 40.0% | |
| AATCACGCAGCCATTTATGT+TGG | + | chr1_3:44483693-44483712 | None:intergenic | 40.0% | |
| AACATAAATGGCTGCGTGAT+TGG | - | chr1_3:44483692-44483711 | Msa0119950:intron | 40.0% | |
| ACATAAATGGCTGCGTGATT+GGG | - | chr1_3:44483693-44483712 | Msa0119950:intron | 40.0% | |
| AACTCGCAAACAAAGCCTTA+AGG | + | chr1_3:44483827-44483846 | None:intergenic | 40.0% | |
| !! | GCTTTGTTTGCGAGTTTGAA+GGG | - | chr1_3:44483831-44483850 | Msa0119950:intron | 40.0% |
| ! | CTTTGTTTGCGAGTTTGAAG+GGG | - | chr1_3:44483832-44483851 | Msa0119950:intron | 40.0% |
| GAGGGTTTGGAAAAAAAGGA+AGG | - | chr1_3:44483864-44483883 | Msa0119950:intron | 40.0% | |
| GGAGTAAGTGGAAGAAATAG+AGG | - | chr1_3:44483885-44483904 | Msa0119950:intron | 40.0% | |
| CCCATGACCACTAGATTATA+AGG | - | chr1_3:44483919-44483938 | Msa0119950:intron | 40.0% | |
| CTAACGTGTCCATGTATACA+AGG | - | chr1_3:44484063-44484082 | Msa0119950:intron | 40.0% | |
| ! | CTCGTTTACATTTTCTAGGC+AGG | + | chr1_3:44484189-44484208 | None:intergenic | 40.0% |
| GGATGGTACATATCTCTGAA+TGG | + | chr1_3:44484343-44484362 | None:intergenic | 40.0% | |
| ATAAGTGGATGGAATCTGCA+AGG | + | chr1_3:44484470-44484489 | None:intergenic | 40.0% | |
| CTTCCTGGTCTGATGAAAAT+TGG | - | chr1_3:44484640-44484659 | Msa0119950:intron | 40.0% | |
| ! | GATCCAATTTTCATCAGACC+AGG | + | chr1_3:44484646-44484665 | None:intergenic | 40.0% |
| ATAAGTTCATTCCACGTGTC+TGG | - | chr1_3:44484734-44484753 | Msa0119950:intron | 40.0% | |
| ATGGTCACCCTTCCAAATAT+CGG | + | chr1_3:44484820-44484839 | None:intergenic | 40.0% | |
| CTTTCGGAATTGAGGAAAGA+TGG | + | chr1_3:44484839-44484858 | None:intergenic | 40.0% | |
| AAGAGATGCAATATGGAAGC+TGG | + | chr1_3:44484889-44484908 | None:intergenic | 40.0% | |
| ! | AGTTTTGCAGGATCGTTTTC+TGG | - | chr1_3:44484953-44484972 | Msa0119950:intron | 40.0% |
| AGGAAACTGTGACAAAGACA+AGG | + | chr1_3:44484981-44485000 | None:intergenic | 40.0% | |
| GTACAGTGAAATTGCAGGAA+TGG | + | chr1_3:44485019-44485038 | None:intergenic | 40.0% | |
| AGTCTGTACAGTGAAATTGC+AGG | + | chr1_3:44485024-44485043 | None:intergenic | 40.0% | |
| GGATGTGTAAATTTGATGCG+AGG | - | chr1_3:44485081-44485100 | Msa0119950:intron | 40.0% | |
| TGTGACTGTTTGAGAGCTTA+TGG | - | chr1_3:44485168-44485187 | Msa0119950:intron | 40.0% | |
| CGAACCTGAAACAAAGCAGA+AGG | + | chr1_3:44470182-44470201 | Msa0119940:intron | 45.0% | |
| TCGTTAGTAGACGGTGAGAT+TGG | - | chr1_3:44470252-44470271 | Msa0119950:three_prime_UTR | 45.0% | |
| !! | CGACTTGTTGGTTGGTCTAA+TGG | - | chr1_3:44470609-44470628 | Msa0119950:three_prime_UTR | 45.0% |
| ! | GGAATAGACGGACTCTCTAT+AGG | + | chr1_3:44470711-44470730 | None:intergenic | 45.0% |
| TACCGGAGATTGGGAATAGA+CGG | + | chr1_3:44470723-44470742 | None:intergenic | 45.0% | |
| ! | GAATCTACGACACTGGGTTT+TGG | - | chr1_3:44470912-44470931 | Msa0119950:intron | 45.0% |
| !! | TTTTGGAGACCCGCGTTTTA+CGG | - | chr1_3:44470929-44470948 | Msa0119950:intron | 45.0% |
| CGGAGCAAAATAATCGCTGA+GGG | + | chr1_3:44471200-44471219 | None:intergenic | 45.0% | |
| ACGGAGCAAAATAATCGCTG+AGG | + | chr1_3:44471201-44471220 | None:intergenic | 45.0% | |
| TTCTATGATTATGGTCGCGG+TGG | - | chr1_3:44471297-44471316 | Msa0119950:intron | 45.0% | |
| !! | TTTTGACTACCTTGCGTGTG+AGG | - | chr1_3:44471714-44471733 | Msa0119950:intron | 45.0% |
| TTTCTTACACCTCACACGCA+AGG | + | chr1_3:44471726-44471745 | None:intergenic | 45.0% | |
| GGTTGAAATTCGGGTCTGTT+TGG | - | chr1_3:44471874-44471893 | Msa0119950:intron | 45.0% | |
| ACAAGCTGTCCTAAAGCTTG+TGG | + | chr1_3:44472011-44472030 | None:intergenic | 45.0% | |
| AACTTATTTCCACAGGCTCC+AGG | - | chr1_3:44472070-44472089 | Msa0119950:CDS | 45.0% | |
| ACTTATTTCCACAGGCTCCA+GGG | - | chr1_3:44472071-44472090 | Msa0119950:CDS | 45.0% | |
| AGTTGCGTAATAAGCTACCC+TGG | + | chr1_3:44472091-44472110 | None:intergenic | 45.0% | |
| CACTAGAGGAACCATTCGAA+AGG | + | chr1_3:44472444-44472463 | None:intergenic | 45.0% | |
| TCGAATGGTTCCTCTAGTGT+AGG | - | chr1_3:44472445-44472464 | Msa0119950:CDS | 45.0% | |
| CGAATGGTTCCTCTAGTGTA+GGG | - | chr1_3:44472446-44472465 | Msa0119950:CDS | 45.0% | |
| ! | CACTTTTCTCCCTACACTAG+AGG | + | chr1_3:44472458-44472477 | None:intergenic | 45.0% |
| TTGTCTTTGAGCAGTGGTCA+AGG | - | chr1_3:44472547-44472566 | Msa0119950:intron | 45.0% | |
| !!! | TTACGTTTTCTAAGGCGGGA+AGG | - | chr1_3:44472596-44472615 | Msa0119950:intron | 45.0% |
| CCATCATCAGAGGTAGCAAA+TGG | + | chr1_3:44472637-44472656 | None:intergenic | 45.0% | |
| ! | CCATTTGCTACCTCTGATGA+TGG | - | chr1_3:44472634-44472653 | Msa0119950:intron | 45.0% |
| GACAGTCATACCATCATCAG+AGG | + | chr1_3:44472647-44472666 | None:intergenic | 45.0% | |
| AATTGCGAGCTCAAAAACCC+TGG | + | chr1_3:44472788-44472807 | None:intergenic | 45.0% | |
| GACCATAAATCGTCATCACG+TGG | - | chr1_3:44472811-44472830 | Msa0119950:intron | 45.0% | |
| !! | GATCCTGGTTTTCAACAGCT+TGG | - | chr1_3:44472833-44472852 | Msa0119950:intron | 45.0% |
| AAGCCAAGCTGTTGAAAACC+AGG | + | chr1_3:44472839-44472858 | None:intergenic | 45.0% | |
| ! | TGGTTTTCAACAGCTTGGCT+TGG | - | chr1_3:44472838-44472857 | Msa0119950:intron | 45.0% |
| ! | GGTTTTCAACAGCTTGGCTT+GGG | - | chr1_3:44472839-44472858 | Msa0119950:intron | 45.0% |
| !! | GTTTTCAACAGCTTGGCTTG+GGG | - | chr1_3:44472840-44472859 | Msa0119950:intron | 45.0% |
| CACTTCTCTTCTCTCCTCAT+AGG | - | chr1_3:44473385-44473404 | Msa0119950:intron | 45.0% | |
| ! | CACTACTGAATTGGCCTATG+AGG | + | chr1_3:44473402-44473421 | None:intergenic | 45.0% |
| CTGCTTATCAATGTGCGGAT+TGG | - | chr1_3:44473463-44473482 | Msa0119950:intron | 45.0% | |
| AAAACTCGGTATCTGGCCAA+AGG | + | chr1_3:44473546-44473565 | None:intergenic | 45.0% | |
| ! | GAAGCAGAAGCGCAATAACT+GGG | - | chr1_3:44474358-44474377 | Msa0119950:intron | 45.0% |
| ATAAAAGCAGAGGGTTAGGG+AGG | - | chr1_3:44474462-44474481 | Msa0119950:CDS | 45.0% | |
| CAGAAGTGGTAGACTCAATG+TGG | - | chr1_3:44474502-44474521 | Msa0119950:CDS | 45.0% | |
| TCTACGTTCGAACACTCGAT+AGG | + | chr1_3:44474533-44474552 | None:intergenic | 45.0% | |
| GTGTTCGAACGTAGAAAGCA+AGG | - | chr1_3:44474538-44474557 | Msa0119950:intron | 45.0% | |
| GTTCGAACGTAGAAAGCAAG+GGG | - | chr1_3:44474540-44474559 | Msa0119950:intron | 45.0% | |
| ATGAAGTGCAGAAAGCGACA+TGG | - | chr1_3:44474688-44474707 | Msa0119950:CDS | 45.0% | |
| ! | GTGCTCTCTCTAGTTGCTTT+CGG | - | chr1_3:44475682-44475701 | Msa0119950:intron | 45.0% |
| !! | TGCATTGGTCCAGTTTGCTA+AGG | - | chr1_3:44475725-44475744 | Msa0119950:intron | 45.0% |
| ! | AGCAGATAGCCTTAGCAAAC+TGG | + | chr1_3:44475737-44475756 | None:intergenic | 45.0% |
| TTCGTACACTTCAGGCTGTT+TGG | + | chr1_3:44475794-44475813 | None:intergenic | 45.0% | |
| AACAGCCTGAAGTGTACGAA+TGG | - | chr1_3:44475794-44475813 | Msa0119950:intron | 45.0% | |
| ACATGAAGGAGCAAGAACAG+AGG | + | chr1_3:44475954-44475973 | None:intergenic | 45.0% | |
| TTTGACTGAATTCCCAGGTC+TGG | - | chr1_3:44476004-44476023 | Msa0119950:intron | 45.0% | |
| TCCCAGGTCTGGAAAAACTA+AGG | - | chr1_3:44476015-44476034 | Msa0119950:intron | 45.0% | |
| !! | CCCTTAGTTTTTCCAGACCT+GGG | + | chr1_3:44476019-44476038 | None:intergenic | 45.0% |
| CCCAGGTCTGGAAAAACTAA+GGG | - | chr1_3:44476016-44476035 | Msa0119950:intron | 45.0% | |
| !! | ACCCTTAGTTTTTCCAGACC+TGG | + | chr1_3:44476020-44476039 | None:intergenic | 45.0% |
| CAATGCATGTAAGTGCAAGC+AGG | + | chr1_3:44476072-44476091 | None:intergenic | 45.0% | |
| TGCAATTGCTAAACTTGGCC+CGG | - | chr1_3:44476093-44476112 | Msa0119950:intron | 45.0% | |
| ! | GTGAGCAAGAAACTTTTGCC+GGG | + | chr1_3:44476114-44476133 | None:intergenic | 45.0% |
| !! | TCCATGAGCACTGAGATAAC+TGG | - | chr1_3:44476142-44476161 | Msa0119950:intron | 45.0% |
| ACCAGTTATCTCAGTGCTCA+TGG | + | chr1_3:44476146-44476165 | None:intergenic | 45.0% | |
| ! | TGGTAGTTTGATGGACATGC+TGG | - | chr1_3:44476162-44476181 | Msa0119950:intron | 45.0% |
| ! | AGTTTGATGGACATGCTGGT+TGG | - | chr1_3:44476166-44476185 | Msa0119950:intron | 45.0% |
| !!! | CACTGGTTTTGGCACTAAAC+CGG | - | chr1_3:44476433-44476452 | Msa0119950:intron | 45.0% |
| ! | ACTAAGTGAGGTTGGCTACA+TGG | + | chr1_3:44476691-44476710 | None:intergenic | 45.0% |
| ATGTAGCCAACCTCACTTAG+TGG | - | chr1_3:44476690-44476709 | Msa0119950:intron | 45.0% | |
| TGTAGCCAACCTCACTTAGT+GGG | - | chr1_3:44476691-44476710 | Msa0119950:intron | 45.0% | |
| ! | TGTTACCATGGTGCAGGTTT+TGG | - | chr1_3:44476972-44476991 | Msa0119950:intron | 45.0% |
| !!! | GCAGGTTTTGGAGAAGGATT+TGG | - | chr1_3:44476984-44477003 | Msa0119950:intron | 45.0% |
| CTGGTGATTCCCGGATAAAA+AGG | + | chr1_3:44477574-44477593 | None:intergenic | 45.0% | |
| TTTGTGATGCTGGTGATTCC+CGG | + | chr1_3:44477583-44477602 | None:intergenic | 45.0% | |
| CAGCTGAATTTCTGTCCAGA+GGG | - | chr1_3:44477740-44477759 | Msa0119950:CDS | 45.0% | |
| !! | CAACAAGTTGATGGAGTGCA+TGG | - | chr1_3:44477850-44477869 | Msa0119950:intron | 45.0% |
| ATGGAGTGCATGGATGAACT+TGG | - | chr1_3:44477860-44477879 | Msa0119950:intron | 45.0% | |
| TGGAGTGCATGGATGAACTT+GGG | - | chr1_3:44477861-44477880 | Msa0119950:intron | 45.0% | |
| ! | ATGGCTGCTATTGACTACAC+AGG | + | chr1_3:44478084-44478103 | None:intergenic | 45.0% |
| TAGTCAATAGCAGCCATAGC+AGG | - | chr1_3:44478087-44478106 | Msa0119950:intron | 45.0% | |
| ATTTCACATAGCGCCTGCTA+TGG | + | chr1_3:44478103-44478122 | None:intergenic | 45.0% | |
| CAGCCAAATAACAGCTGTAG+TGG | - | chr1_3:44478168-44478187 | Msa0119950:intron | 45.0% | |
| ! | CATGAATGCCAATTTTGGGC+TGG | + | chr1_3:44478219-44478238 | None:intergenic | 45.0% |
| CAGCCCAAAATTGGCATTCA+TGG | - | chr1_3:44478217-44478236 | Msa0119950:intron | 45.0% | |
| GTCCCAAGAGTTGAATCTAG+AGG | - | chr1_3:44478518-44478537 | Msa0119950:intron | 45.0% | |
| GCCAGAGTCACATATTAGAG+AGG | + | chr1_3:44478688-44478707 | None:intergenic | 45.0% | |
| ! | CTTTTTCTACCAGAGAGCCA+CGG | - | chr1_3:44478828-44478847 | Msa0119950:intron | 45.0% |
| ! | AGACTCGGGTTCTTTTGATG+AGG | - | chr1_3:44479106-44479125 | Msa0119950:CDS | 45.0% |
| ! | CATGTGTCAAGCTCTAGTTC+TGG | - | chr1_3:44479401-44479420 | Msa0119950:intron | 45.0% |
| !! | GTCAAGCTCTAGTTCTGGAA+AGG | - | chr1_3:44479406-44479425 | Msa0119950:intron | 45.0% |
| GAAAGAAGCTGAATTCCTGG+AGG | - | chr1_3:44479478-44479497 | Msa0119950:CDS | 45.0% | |
| ! | AAAGGCTGATTCTCTGCAAG+AGG | - | chr1_3:44479514-44479533 | Msa0119950:CDS | 45.0% |
| GGAATTGGTAAAGGAGGTTG+TGG | + | chr1_3:44479565-44479584 | None:intergenic | 45.0% | |
| CAACCTCCTTTACCAATTCC+TGG | - | chr1_3:44479565-44479584 | Msa0119950:CDS | 45.0% | |
| AAGAAGGAGAAACGCGAAAG+AGG | + | chr1_3:44479632-44479651 | None:intergenic | 45.0% | |
| TGGCCCCTAAATGGCAATTA+AGG | - | chr1_3:44479891-44479910 | Msa0119950:intron | 45.0% | |
| GTCAATGAAGGCTGTCAAAG+TGG | + | chr1_3:44479957-44479976 | None:intergenic | 45.0% | |
| ! | TTGACACTGAGCTCCCATTT+TGG | - | chr1_3:44479972-44479991 | Msa0119950:intron | 45.0% |
| ! | GCGTTTTTCCATGGCATTTC+AGG | - | chr1_3:44480383-44480402 | Msa0119950:intron | 45.0% |
| TGAATGCACCTGAAATGCCA+TGG | + | chr1_3:44480394-44480413 | None:intergenic | 45.0% | |
| GAGGAGGACAGGTTTATGAA+AGG | - | chr1_3:44480628-44480647 | Msa0119950:intron | 45.0% | |
| TAAAGGTGGACAGGAGCAAA+AGG | - | chr1_3:44480674-44480693 | Msa0119950:intron | 45.0% | |
| CATACATGAGCATCCACATC+AGG | + | chr1_3:44480891-44480910 | None:intergenic | 45.0% | |
| GGTACCATAGTAGTCAACAG+CGG | - | chr1_3:44481136-44481155 | Msa0119950:intron | 45.0% | |
| CGCTACGACAATTACCATAG+CGG | + | chr1_3:44481208-44481227 | None:intergenic | 45.0% | |
| CGCTATGGTAATTGTCGTAG+CGG | - | chr1_3:44481206-44481225 | Msa0119950:intron | 45.0% | |
| GTGACCGCTATTTGTCATAC+TGG | - | chr1_3:44481614-44481633 | Msa0119950:intron | 45.0% | |
| TGTCACATAGTAGTCAACCC+CGG | + | chr1_3:44481684-44481703 | None:intergenic | 45.0% | |
| GCTTTAGTCAGGATAGTTGC+TGG | - | chr1_3:44481823-44481842 | Msa0119950:intron | 45.0% | |
| ! | GTTGCTGGTTAGTTACGAAC+TGG | - | chr1_3:44481838-44481857 | Msa0119950:intron | 45.0% |
| ! | ACCAGTTTTCTTGTTGGGGT+GGG | + | chr1_3:44481995-44482014 | None:intergenic | 45.0% |
| ! | AACCAGTTTTCTTGTTGGGG+TGG | + | chr1_3:44481996-44482015 | None:intergenic | 45.0% |
| !! | GGACTTGCTATCTTGTTTGC+AGG | - | chr1_3:44482255-44482274 | Msa0119950:intron | 45.0% |
| AACAGCCTGCACCAAATGTA+GGG | - | chr1_3:44482290-44482309 | Msa0119950:intron | 45.0% | |
| AGCTTCACATCCTTGTCACA+TGG | - | chr1_3:44482809-44482828 | Msa0119950:CDS | 45.0% | |
| CAATAGCATGCCATGTGACA+AGG | + | chr1_3:44482822-44482841 | None:intergenic | 45.0% | |
| ! | GATGATGGTGCCCGTTATAA+CGG | - | chr1_3:44482877-44482896 | Msa0119950:CDS | 45.0% |
| TCCAGCATCACCGTTATAAC+GGG | + | chr1_3:44482890-44482909 | None:intergenic | 45.0% | |
| CTCCAGCATCACCGTTATAA+CGG | + | chr1_3:44482891-44482910 | None:intergenic | 45.0% | |
| TGACATTGGTCAGATGATGC+TGG | - | chr1_3:44483056-44483075 | Msa0119950:intron | 45.0% | |
| !! | TATTGATGTTGGTGCTGCCT+CGG | - | chr1_3:44483260-44483279 | Msa0119950:intron | 45.0% |
| GACACTTCTCTATCCAGAAC+AGG | + | chr1_3:44483458-44483477 | None:intergenic | 45.0% | |
| !! | GGCTTTGTTTGCGAGTTTGA+AGG | - | chr1_3:44483830-44483849 | Msa0119950:intron | 45.0% |
| TTTGCGAGTTTGAAGGGGAA+GGG | - | chr1_3:44483837-44483856 | Msa0119950:intron | 45.0% | |
| AGGGGAGGGTTTGGAAAAAA+AGG | - | chr1_3:44483860-44483879 | Msa0119950:intron | 45.0% | |
| TCAGAGATATGTACCATCCC+TGG | - | chr1_3:44484344-44484363 | Msa0119950:intron | 45.0% | |
| ! | CTTTCTGGTGCATAAGTGGA+TGG | + | chr1_3:44484481-44484500 | None:intergenic | 45.0% |
| CATCCACTTATGCACCAGAA+AGG | - | chr1_3:44484479-44484498 | Msa0119950:intron | 45.0% | |
| ! | CAACCTTTCTGGTGCATAAG+TGG | + | chr1_3:44484485-44484504 | None:intergenic | 45.0% |
| CACTTATGCACCAGAAAGGT+TGG | - | chr1_3:44484483-44484502 | Msa0119950:intron | 45.0% | |
| CTCAAGAGATCCAACCTTTC+TGG | + | chr1_3:44484496-44484515 | None:intergenic | 45.0% | |
| CAGAAAGGTTGGATCTCTTG+AGG | - | chr1_3:44484494-44484513 | Msa0119950:intron | 45.0% | |
| CTGGTTCCCGATATTTGGAA+GGG | - | chr1_3:44484810-44484829 | Msa0119950:intron | 45.0% | |
| TGGTCACCCTTCCAAATATC+GGG | + | chr1_3:44484819-44484838 | None:intergenic | 45.0% | |
| AATGGCACATGGAATGAAGG+AGG | + | chr1_3:44485001-44485020 | None:intergenic | 45.0% | |
| AGGAATGGCACATGGAATGA+AGG | + | chr1_3:44485004-44485023 | None:intergenic | 45.0% | |
| GAAATTGCAGGAATGGCACA+TGG | + | chr1_3:44485012-44485031 | None:intergenic | 45.0% | |
| GGGATGCAATCCAGAATTTG+AGG | + | chr1_3:44485363-44485382 | None:intergenic | 45.0% | |
| !! | TTAAAAAAATACTATATTTA+TGG | - | chr1_3:44470983-44471002 | Msa0119950:CDS | 5.0% |
| !! | TATTTACAAATATATATTAT+AGG | - | chr1_3:44471827-44471846 | Msa0119950:intron | 5.0% |
| !! | ATTAAATTTAAAAAGATAAT+AGG | + | chr1_3:44479010-44479029 | None:intergenic | 5.0% |
| !! | AAAAAAAAAAAAAATCAATA+AGG | + | chr1_3:44482475-44482494 | None:intergenic | 5.0% |
| TAGAGAAGGAAGAGGTTGCG+TGG | + | chr1_3:44470007-44470026 | Msa0119940:intron | 50.0% | |
| GACGGTGAGATTGGTACACT+CGG | - | chr1_3:44470261-44470280 | Msa0119950:three_prime_UTR | 50.0% | |
| ACGGTGAGATTGGTACACTC+GGG | - | chr1_3:44470262-44470281 | Msa0119950:three_prime_UTR | 50.0% | |
| GTACACTCGGGTAGTTGTAC+CGG | - | chr1_3:44470274-44470293 | Msa0119950:three_prime_UTR | 50.0% | |
| GTCCGTCTATTCCCAATCTC+CGG | - | chr1_3:44470718-44470737 | Msa0119950:three_prime_UTR | 50.0% | |
| AATCGTCATCACGTGGATCC+TGG | - | chr1_3:44472818-44472837 | Msa0119950:intron | 50.0% | |
| TGACAATGCCTTCACCCATG+CGG | + | chr1_3:44472875-44472894 | None:intergenic | 50.0% | |
| !! | GGTGAAGGCATTGTCATGTC+AGG | - | chr1_3:44472879-44472898 | Msa0119950:intron | 50.0% |
| ! | GGAAGCAGAAGCGCAATAAC+TGG | - | chr1_3:44474357-44474376 | Msa0119950:intron | 50.0% |
| ! | CAGAGTCAGGCAAGTTTTGC+CGG | - | chr1_3:44474563-44474582 | Msa0119950:intron | 50.0% |
| ! | AGAGTCAGGCAAGTTTTGCC+GGG | - | chr1_3:44474564-44474583 | Msa0119950:intron | 50.0% |
| ACAAAGGACGTCACTACAGC+TGG | + | chr1_3:44475838-44475857 | None:intergenic | 50.0% | |
| GCTGCAGCAGGCTATTGATA+AGG | - | chr1_3:44476345-44476364 | Msa0119950:intron | 50.0% | |
| TGGCACTAAACCGGTGATGT+TGG | - | chr1_3:44476442-44476461 | Msa0119950:intron | 50.0% | |
| CTCATCCCACTAAGTGAGGT+TGG | + | chr1_3:44476699-44476718 | None:intergenic | 50.0% | |
| CAACCTCACTTAGTGGGATG+AGG | - | chr1_3:44476697-44476716 | Msa0119950:intron | 50.0% | |
| AAGCCTCATCCCACTAAGTG+AGG | + | chr1_3:44476703-44476722 | None:intergenic | 50.0% | |
| TCACTTAGTGGGATGAGGCT+TGG | - | chr1_3:44476702-44476721 | Msa0119950:intron | 50.0% | |
| CTTCTCCAAAACCTGCACCA+TGG | + | chr1_3:44476980-44476999 | None:intergenic | 50.0% | |
| !!! | CATGGTGCAGGTTTTGGAGA+AGG | - | chr1_3:44476978-44476997 | Msa0119950:intron | 50.0% |
| GCTAGCAGTACAACTAGCAC+AGG | + | chr1_3:44477197-44477216 | None:intergenic | 50.0% | |
| TCTGCATTTGGAGGACCTTC+TGG | + | chr1_3:44477628-44477647 | None:intergenic | 50.0% | |
| GTCACTGCTTCTGCATTTGG+AGG | + | chr1_3:44477637-44477656 | None:intergenic | 50.0% | |
| TGGGTCACTGCTTCTGCATT+TGG | + | chr1_3:44477640-44477659 | None:intergenic | 50.0% | |
| GCAGCTGAATTTCTGTCCAG+AGG | - | chr1_3:44477739-44477758 | Msa0119950:CDS | 50.0% | |
| GCATTGCTCTAGTTACCCTC+TGG | + | chr1_3:44477758-44477777 | None:intergenic | 50.0% | |
| !!! | TTTTTTCTGCCGTGGCTCTC+TGG | + | chr1_3:44478840-44478859 | None:intergenic | 50.0% |
| GAAAGCAGCCTGTTCTGACT+TGG | - | chr1_3:44479436-44479455 | Msa0119950:intron | 50.0% | |
| GCAGAGAATCAGCCTTTGCT+CGG | + | chr1_3:44479511-44479530 | None:intergenic | 50.0% | |
| TGGGAGCTCAGTGTCAATGA+AGG | + | chr1_3:44479969-44479988 | None:intergenic | 50.0% | |
| GATCAAACCATCACACCGGT+TGG | - | chr1_3:44480604-44480623 | Msa0119950:intron | 50.0% | |
| TGAGCATCCACATCAGGTTC+CGG | + | chr1_3:44480885-44480904 | None:intergenic | 50.0% | |
| GACCGCTTTAGCTGCTATAG+CGG | - | chr1_3:44481245-44481264 | Msa0119950:intron | 50.0% | |
| TGCCGCTATAGCAGCTAAAG+CGG | + | chr1_3:44481250-44481269 | None:intergenic | 50.0% | |
| TAGCTGCTATAGCGGCATAG+TGG | - | chr1_3:44481253-44481272 | Msa0119950:intron | 50.0% | |
| !! | TGCTATTCCACCTTTGGGGT+TGG | - | chr1_3:44481641-44481660 | Msa0119950:intron | 50.0% |
| TAGTAGTCAACCCCGGATAG+CGG | + | chr1_3:44481677-44481696 | None:intergenic | 50.0% | |
| ! | AGTTTTCTTGTTGGGGTGGG+GGG | + | chr1_3:44481992-44482011 | None:intergenic | 50.0% |
| ! | CAGTTTTCTTGTTGGGGTGG+GGG | + | chr1_3:44481993-44482012 | None:intergenic | 50.0% |
| ! | CCAGTTTTCTTGTTGGGGTG+GGG | + | chr1_3:44481994-44482013 | None:intergenic | 50.0% |
| GAACAGCCTGCACCAAATGT+AGG | - | chr1_3:44482289-44482308 | Msa0119950:intron | 50.0% | |
| ACAGCCTGCACCAAATGTAG+GGG | - | chr1_3:44482291-44482310 | Msa0119950:intron | 50.0% | |
| !! | ACAACCCCTACATTTGGTGC+AGG | + | chr1_3:44482298-44482317 | None:intergenic | 50.0% |
| TGCACCAAATGTAGGGGTTG+TGG | - | chr1_3:44482297-44482316 | Msa0119950:intron | 50.0% | |
| TGGTCCACAACCCCTACATT+TGG | + | chr1_3:44482304-44482323 | None:intergenic | 50.0% | |
| TTAGGATGAGACAGCGCAGT+AGG | + | chr1_3:44482522-44482541 | None:intergenic | 50.0% | |
| CGTTATAACGGTGATGCTGG+AGG | - | chr1_3:44482889-44482908 | Msa0119950:CDS | 50.0% | |
| !! | TGATGCTGGAGGTGTTCAGA+TGG | - | chr1_3:44482900-44482919 | Msa0119950:CDS | 50.0% |
| !! | ATTGATGTTGGTGCTGCCTC+GGG | - | chr1_3:44483261-44483280 | Msa0119950:intron | 50.0% |
| TAAATGGCTGCGTGATTGGG+TGG | - | chr1_3:44483696-44483715 | Msa0119950:intron | 50.0% | |
| CTCAGGATAGTCACGAGTGT+GGG | + | chr1_3:44483748-44483767 | None:intergenic | 50.0% | |
| ACTCAGGATAGTCACGAGTG+TGG | + | chr1_3:44483749-44483768 | None:intergenic | 50.0% | |
| GTGACTATCCTGAGTTCCAC+TGG | - | chr1_3:44483754-44483773 | Msa0119950:intron | 50.0% | |
| CGACTGTCGATCAGCTAACT+CGG | + | chr1_3:44483785-44483804 | None:intergenic | 50.0% | |
| GTTTGCGAGTTTGAAGGGGA+AGG | - | chr1_3:44483836-44483855 | Msa0119950:intron | 50.0% | |
| GTGACCTTTCCACTGTGTCA+AGG | - | chr1_3:44483959-44483978 | Msa0119950:intron | 50.0% | |
| TGAGCCTTGACACAGTGGAA+AGG | + | chr1_3:44483966-44483985 | None:intergenic | 50.0% | |
| GATTGTGAGCCTTGACACAG+TGG | + | chr1_3:44483971-44483990 | None:intergenic | 50.0% | |
| TTCACACAGGTTACTGCCGT+TGG | - | chr1_3:44484297-44484316 | Msa0119950:intron | 50.0% | |
| TCACACAGGTTACTGCCGTT+GGG | - | chr1_3:44484298-44484317 | Msa0119950:intron | 50.0% | |
| CAACATTGCTGCATGCCCAA+CGG | + | chr1_3:44484316-44484335 | None:intergenic | 50.0% | |
| TGTAGCCACTGGTGTTTACC+CGG | + | chr1_3:44484764-44484783 | None:intergenic | 50.0% | |
| ! | GCTACAATCCTGAGGAGCAT+CGG | - | chr1_3:44484778-44484797 | Msa0119950:intron | 50.0% |
| !! | CTACAATCCTGAGGAGCATC+GGG | - | chr1_3:44484779-44484798 | Msa0119950:intron | 50.0% |
| GGTTCCTGGTTCCCGATATT+TGG | - | chr1_3:44484805-44484824 | Msa0119950:intron | 50.0% | |
| CCTTCCAAATATCGGGAACC+AGG | + | chr1_3:44484812-44484831 | None:intergenic | 50.0% | |
| CCTGGTTCCCGATATTTGGA+AGG | - | chr1_3:44484809-44484828 | Msa0119950:intron | 50.0% | |
| !! | GGATCAGCTTCGAGTTTTGC+AGG | - | chr1_3:44484941-44484960 | Msa0119950:intron | 50.0% |
| !! | CGTGGAGGCACTCAAAACAC+TGG | + | chr1_3:44470533-44470552 | Msa0119940:CDS | 55.0% |
| ATAAGCTACCCTGGAGCCTG+TGG | + | chr1_3:44472082-44472101 | None:intergenic | 55.0% | |
| !! | TTAGCACTGGCGTCAGCTTG+TGG | + | chr1_3:44472679-44472698 | None:intergenic | 55.0% |
| TTGGGGTAGACCAAACCGCA+TGG | - | chr1_3:44472857-44472876 | Msa0119950:intron | 55.0% | |
| TGGGGTAGACCAAACCGCAT+GGG | - | chr1_3:44472858-44472877 | Msa0119950:intron | 55.0% | |
| AGACCAAACCGCATGGGTGA+AGG | - | chr1_3:44472864-44472883 | Msa0119950:intron | 55.0% | |
| ATGCCTTCACCCATGCGGTT+TGG | + | chr1_3:44472870-44472889 | None:intergenic | 55.0% | |
| AGAAAGCAAGGGGCAGAGTC+AGG | - | chr1_3:44474550-44474569 | Msa0119950:intron | 55.0% | |
| ! | TCAGGCAAGTTTTGCCGGGA+GGG | - | chr1_3:44474568-44474587 | Msa0119950:intron | 55.0% |
| GCTAAGGCTATCTGCTCCCT+TGG | - | chr1_3:44475741-44475760 | Msa0119950:intron | 55.0% | |
| !! | GCTCTAAAAGCTGCAGCTCG+AGG | + | chr1_3:44476268-44476287 | None:intergenic | 55.0% |
| CGTTGAGTGGGGTTCAGAAG+AGG | - | chr1_3:44476291-44476310 | Msa0119950:CDS | 55.0% | |
| TTGCTCGGAAAGATGCCTCC+AGG | + | chr1_3:44479496-44479515 | None:intergenic | 55.0% | |
| !! | GGAGGCATCTTTCCGAGCAA+AGG | - | chr1_3:44479496-44479515 | Msa0119950:CDS | 55.0% |
| ! | AACCATCACACCGGTTGGTG+AGG | - | chr1_3:44480609-44480628 | Msa0119950:intron | 55.0% |
| AACCTGTCCTCCTCACCAAC+CGG | + | chr1_3:44480622-44480641 | None:intergenic | 55.0% | |
| TCGGGCTTTCTGGGTATAGG+AGG | + | chr1_3:44480861-44480880 | None:intergenic | 55.0% | |
| TATACCCAGAAAGCCCGACC+CGG | - | chr1_3:44480863-44480882 | Msa0119950:intron | 55.0% | |
| ATCCACATCAGGTTCCGGGT+CGG | + | chr1_3:44480880-44480899 | None:intergenic | 55.0% | |
| GAGCATCCACATCAGGTTCC+GGG | + | chr1_3:44480884-44480903 | None:intergenic | 55.0% | |
| ! | TCGGCCGCTGTTGACTACTA+TGG | + | chr1_3:44481143-44481162 | None:intergenic | 55.0% |
| TAGTCAACAGCGGCCGATAG+CGG | - | chr1_3:44481146-44481165 | Msa0119950:intron | 55.0% | |
| !! | GGCCGATAGCGGAACTATAG+CGG | - | chr1_3:44481157-44481176 | Msa0119950:intron | 55.0% |
| GGCCGCTATAGTTCCGCTAT+CGG | + | chr1_3:44481162-44481181 | None:intergenic | 55.0% | |
| CGTTGCCACTACTCTACGCA+AGG | + | chr1_3:44481183-44481202 | None:intergenic | 55.0% | |
| GTAGTGGCAACGAACCGCTA+TGG | - | chr1_3:44481191-44481210 | Msa0119950:intron | 55.0% | |
| TGGTAATTGTCGTAGCGGCG+CGG | - | chr1_3:44481211-44481230 | Msa0119950:intron | 55.0% | |
| GCTATAGCGGCATAGTGGTG+CGG | - | chr1_3:44481258-44481277 | Msa0119950:intron | 55.0% | |
| ! | AAGAGTGTGTTTCGCGGCAC+AGG | + | chr1_3:44481387-44481406 | None:intergenic | 55.0% |
| TTCATAGCGGCCAACCCCAA+AGG | + | chr1_3:44481654-44481673 | None:intergenic | 55.0% | |
| ! | TTTTCTTGTTGGGGTGGGGG+GGG | + | chr1_3:44481990-44482009 | None:intergenic | 55.0% |
| ! | GTTTTCTTGTTGGGGTGGGG+GGG | + | chr1_3:44481991-44482010 | None:intergenic | 55.0% |
| CCCCACCCCAACAAGAAAAC+TGG | - | chr1_3:44481991-44482010 | Msa0119950:intron | 55.0% | |
| GCCCGTTATAACGGTGATGC+TGG | - | chr1_3:44482886-44482905 | Msa0119950:CDS | 55.0% | |
| ! | CTGCCTCGGGTTTGGTCAAA+AGG | - | chr1_3:44483274-44483293 | Msa0119950:intron | 55.0% |
| ! | GGTCCTTTTGACCAAACCCG+AGG | + | chr1_3:44483280-44483299 | None:intergenic | 55.0% |
| GGCTAGAGCAGGCAGACATA+CGG | + | chr1_3:44483727-44483746 | None:intergenic | 55.0% | |
| GTCGATCAGCTAACTCGGCA+AGG | + | chr1_3:44483780-44483799 | None:intergenic | 55.0% | |
| CGAGTTTGAAGGGGAAGGGA+GGG | - | chr1_3:44483841-44483860 | Msa0119950:intron | 55.0% | |
| GAGTTTGAAGGGGAAGGGAG+GGG | - | chr1_3:44483842-44483861 | Msa0119950:intron | 55.0% | |
| CGTTGGGCATGCAGCAATGT+TGG | - | chr1_3:44484314-44484333 | Msa0119950:intron | 55.0% | |
| CAGCTGCGTTCTTCGCTTTC+TGG | - | chr1_3:44484665-44484684 | Msa0119950:intron | 55.0% | |
| ATTCCACGTGTCTGGCACTC+CGG | - | chr1_3:44484742-44484761 | Msa0119950:intron | 55.0% | |
| CACCAGTGGCTACAATCCTG+AGG | - | chr1_3:44484770-44484789 | Msa0119950:intron | 55.0% | |
| CTCCTCAGGATTGTAGCCAC+TGG | + | chr1_3:44484775-44484794 | None:intergenic | 55.0% | |
| !! | AATCCTGAGGAGCATCGGGT+GGG | - | chr1_3:44484783-44484802 | Msa0119950:intron | 55.0% |
| AGCTCGAGTAACCGGCTGAG+CGG | - | chr1_3:44470647-44470666 | Msa0119950:three_prime_UTR | 60.0% | |
| AACCGGCTGAGCGGCTAAAG+TGG | - | chr1_3:44470656-44470675 | Msa0119950:three_prime_UTR | 60.0% | |
| ! | AGCCACTTTAGCCGCTCAGC+CGG | + | chr1_3:44470661-44470680 | Msa0119940:CDS | 60.0% |
| GGGGTGGGATCATGCTCCTT+AGG | - | chr1_3:44470885-44470904 | Msa0119950:intron | 60.0% | |
| ! | GTCAGGCAAGTTTTGCCGGG+AGG | - | chr1_3:44474567-44474586 | Msa0119950:intron | 60.0% |
| ! | CAAACAGTGTCGCTCCCTCC+CGG | + | chr1_3:44474585-44474604 | None:intergenic | 60.0% |
| GGGAGCGACACTGTTTGCGT+AGG | - | chr1_3:44474588-44474607 | Msa0119950:intron | 60.0% | |
| GGTTCAGAAGCAGCTGCAGC+AGG | - | chr1_3:44476333-44476352 | Msa0119950:intron | 60.0% | |
| CTCCTCACCAACCGGTGTGA+TGG | + | chr1_3:44480614-44480633 | None:intergenic | 60.0% | |
| !! | CATCACACCGGTTGGTGAGG+AGG | - | chr1_3:44480612-44480631 | Msa0119950:intron | 60.0% |
| GGGTCGGGCTTTCTGGGTAT+AGG | + | chr1_3:44480864-44480883 | None:intergenic | 60.0% | |
| TCCACATCAGGTTCCGGGTC+GGG | + | chr1_3:44480879-44480898 | None:intergenic | 60.0% | |
| AGCGGCCTTGCGTAGAGTAG+TGG | - | chr1_3:44481175-44481194 | Msa0119950:intron | 60.0% | |
| TAGTGGTGCGGAGCGGATAG+CGG | - | chr1_3:44481270-44481289 | Msa0119950:intron | 60.0% | |
| ATAGCGGCCAACCCCAAAGG+TGG | + | chr1_3:44481651-44481670 | None:intergenic | 60.0% | |
| GGCCGCTATGAACCGCTATC+CGG | - | chr1_3:44481662-44481681 | Msa0119950:intron | 60.0% | |
| GCCGCTATGAACCGCTATCC+GGG | - | chr1_3:44481663-44481682 | Msa0119950:intron | 60.0% | |
| ! | CCCCGGATAGCGGTTCATAG+CGG | + | chr1_3:44481667-44481686 | None:intergenic | 60.0% |
| CCGCTATGAACCGCTATCCG+GGG | - | chr1_3:44481664-44481683 | Msa0119950:intron | 60.0% | |
| TTTCTTGTTGGGGTGGGGGG+GGG | + | chr1_3:44481989-44482008 | None:intergenic | 60.0% | |
| !! | TGTTGGTGCTGCCTCGGGTT+TGG | - | chr1_3:44483266-44483285 | Msa0119950:intron | 60.0% |
| !! | TCACGAGTGTGGGCTAGAGC+AGG | + | chr1_3:44483738-44483757 | None:intergenic | 60.0% |
| AGCTAACTCGGCAAGGCCAG+TGG | + | chr1_3:44483773-44483792 | None:intergenic | 60.0% | |
| GCGAGTTTGAAGGGGAAGGG+AGG | - | chr1_3:44483840-44483859 | Msa0119950:intron | 60.0% | |
| TTTGAAGGGGAAGGGAGGGG+AGG | - | chr1_3:44483845-44483864 | Msa0119950:intron | 60.0% | |
| TTGAAGGGGAAGGGAGGGGA+GGG | - | chr1_3:44483846-44483865 | Msa0119950:intron | 60.0% | |
| TTCCACGTGTCTGGCACTCC+GGG | - | chr1_3:44484743-44484762 | Msa0119950:intron | 60.0% | |
| GCACTCCGGGTAAACACCAG+TGG | - | chr1_3:44484756-44484775 | Msa0119950:intron | 60.0% | |
| !! | CAATCCTGAGGAGCATCGGG+TGG | - | chr1_3:44484782-44484801 | Msa0119950:intron | 60.0% |
| !! | ATCCTGAGGAGCATCGGGTG+GGG | - | chr1_3:44484784-44484803 | Msa0119950:intron | 60.0% |
| !! | CACCGGTTGGTGAGGAGGAC+AGG | - | chr1_3:44480617-44480636 | Msa0119950:intron | 65.0% |
| GGTTCCGGGTCGGGCTTTCT+GGG | + | chr1_3:44480870-44480889 | None:intergenic | 65.0% | |
| AGGTTCCGGGTCGGGCTTTC+TGG | + | chr1_3:44480871-44480890 | None:intergenic | 65.0% | |
| AGCGGCATAGTGGTGCGGAG+CGG | - | chr1_3:44481263-44481282 | Msa0119950:intron | 65.0% | |
| TTCTTGTTGGGGTGGGGGGG+GGG | + | chr1_3:44481988-44482007 | None:intergenic | 65.0% | |
| CGGCAAGGCCAGTGGAACTC+AGG | + | chr1_3:44483765-44483784 | None:intergenic | 65.0% | |
| ! | TACCCGGAGTGCCAGACACG+TGG | + | chr1_3:44484748-44484767 | None:intergenic | 65.0% |
| AACCCCACCCGATGCTCCTC+AGG | + | chr1_3:44484789-44484808 | None:intergenic | 65.0% | |
| GCCCGACCCGGAACCTGATG+TGG | - | chr1_3:44480875-44480894 | Msa0119950:intron | 70.0% | |
| TCTTGTTGGGGTGGGGGGGG+GGG | + | chr1_3:44481987-44482006 | None:intergenic | 70.0% | |
| GGGGAAGGGAGGGGAGGGTT+TGG | - | chr1_3:44483851-44483870 | Msa0119950:intron | 70.0% | |
| !! | GGAGCATCGGGTGGGGTTCC+TGG | - | chr1_3:44484791-44484810 | Msa0119950:intron | 70.0% |
| CTTGTTGGGGTGGGGGGGGG+GGG | + | chr1_3:44481986-44482005 | None:intergenic | 75.0% | |
| ! | TTGGGGTGGGGGGGGGGGGT+GGG | + | chr1_3:44481982-44482001 | None:intergenic | 80.0% |
| ! | GGGGGGGGGGGTGGGAGGGA+GGG | + | chr1_3:44481974-44481993 | None:intergenic | 85.0% |
| ! | GGTGGGGGGGGGGGGTGGGA+GGG | + | chr1_3:44481978-44481997 | None:intergenic | 85.0% |
| ! | GTTGGGGTGGGGGGGGGGGG+TGG | + | chr1_3:44481983-44482002 | None:intergenic | 85.0% |
| ! | GGGGGGGGGGGGTGGGAGGG+AGG | + | chr1_3:44481975-44481994 | None:intergenic | 90.0% |
| ! | GGGTGGGGGGGGGGGGTGGG+AGG | + | chr1_3:44481979-44481998 | None:intergenic | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 44469964 | 44485383 | 44469964 | ID=Msa0119950;Name=Msa0119950 |
| chr1_3 | mRNA | 44469964 | 44485383 | 44469964 | ID=Msa0119950-mRNA-1;Parent=Msa0119950;Name=Msa0119950-mRNA-1;_AED=0.08;_eAED=0.08;_QI=153|1|1|1|1|1|18|789|906 |
| chr1_3 | exon | 44469964 | 44470872 | 44469964 | ID=Msa0119950-mRNA-1:exon:13273;Parent=Msa0119950-mRNA-1 |
| chr1_3 | exon | 44470982 | 44471041 | 44470982 | ID=Msa0119950-mRNA-1:exon:13272;Parent=Msa0119950-mRNA-1 |
| chr1_3 | exon | 44471946 | 44472116 | 44471946 | ID=Msa0119950-mRNA-1:exon:13271;Parent=Msa0119950-mRNA-1 |
| chr1_3 | exon | 44472360 | 44472485 | 44472360 | ID=Msa0119950-mRNA-1:exon:13270;Parent=Msa0119950-mRNA-1 |
| chr1_3 | exon | 44472924 | 44473070 | 44472924 | ID=Msa0119950-mRNA-1:exon:13269;Parent=Msa0119950-mRNA-1 |
| chr1_3 | exon | 44474442 | 44474529 | 44474442 | ID=Msa0119950-mRNA-1:exon:13268;Parent=Msa0119950-mRNA-1 |
| chr1_3 | exon | 44474652 | 44474755 | 44474652 | ID=Msa0119950-mRNA-1:exon:13267;Parent=Msa0119950-mRNA-1 |
| chr1_3 | exon | 44475812 | 44476003 | 44475812 | ID=Msa0119950-mRNA-1:exon:13266;Parent=Msa0119950-mRNA-1 |
| chr1_3 | exon | 44476220 | 44476313 | 44476220 | ID=Msa0119950-mRNA-1:exon:13265;Parent=Msa0119950-mRNA-1 |
| chr1_3 | exon | 44477456 | 44477500 | 44477456 | ID=Msa0119950-mRNA-1:exon:13264;Parent=Msa0119950-mRNA-1 |
| chr1_3 | exon | 44477586 | 44477803 | 44477586 | ID=Msa0119950-mRNA-1:exon:13263;Parent=Msa0119950-mRNA-1 |
| chr1_3 | exon | 44477887 | 44477959 | 44477887 | ID=Msa0119950-mRNA-1:exon:13262;Parent=Msa0119950-mRNA-1 |
| chr1_3 | exon | 44478241 | 44478359 | 44478241 | ID=Msa0119950-mRNA-1:exon:13261;Parent=Msa0119950-mRNA-1 |
| chr1_3 | exon | 44478939 | 44479326 | 44478939 | ID=Msa0119950-mRNA-1:exon:13260;Parent=Msa0119950-mRNA-1 |
| chr1_3 | exon | 44479445 | 44479609 | 44479445 | ID=Msa0119950-mRNA-1:exon:13259;Parent=Msa0119950-mRNA-1 |
| chr1_3 | exon | 44480166 | 44480257 | 44480166 | ID=Msa0119950-mRNA-1:exon:13258;Parent=Msa0119950-mRNA-1 |
| chr1_3 | exon | 44482447 | 44482921 | 44482447 | ID=Msa0119950-mRNA-1:exon:13257;Parent=Msa0119950-mRNA-1 |
| chr1_3 | exon | 44485187 | 44485383 | 44485187 | ID=Msa0119950-mRNA-1:exon:13256;Parent=Msa0119950-mRNA-1 |
| chr1_3 | five_prime_UTR | 44485231 | 44485383 | 44485231 | ID=Msa0119950-mRNA-1:five_prime_utr;Parent=Msa0119950-mRNA-1 |
| chr1_3 | CDS | 44485187 | 44485230 | 44485187 | ID=Msa0119950-mRNA-1:cds;Parent=Msa0119950-mRNA-1 |
| chr1_3 | CDS | 44482447 | 44482921 | 44482447 | ID=Msa0119950-mRNA-1:cds;Parent=Msa0119950-mRNA-1 |
| chr1_3 | CDS | 44480166 | 44480257 | 44480166 | ID=Msa0119950-mRNA-1:cds;Parent=Msa0119950-mRNA-1 |
| chr1_3 | CDS | 44479445 | 44479609 | 44479445 | ID=Msa0119950-mRNA-1:cds;Parent=Msa0119950-mRNA-1 |
| chr1_3 | CDS | 44478939 | 44479326 | 44478939 | ID=Msa0119950-mRNA-1:cds;Parent=Msa0119950-mRNA-1 |
| chr1_3 | CDS | 44478241 | 44478359 | 44478241 | ID=Msa0119950-mRNA-1:cds;Parent=Msa0119950-mRNA-1 |
| chr1_3 | CDS | 44477887 | 44477959 | 44477887 | ID=Msa0119950-mRNA-1:cds;Parent=Msa0119950-mRNA-1 |
| chr1_3 | CDS | 44477586 | 44477803 | 44477586 | ID=Msa0119950-mRNA-1:cds;Parent=Msa0119950-mRNA-1 |
| chr1_3 | CDS | 44477456 | 44477500 | 44477456 | ID=Msa0119950-mRNA-1:cds;Parent=Msa0119950-mRNA-1 |
| chr1_3 | CDS | 44476220 | 44476313 | 44476220 | ID=Msa0119950-mRNA-1:cds;Parent=Msa0119950-mRNA-1 |
| chr1_3 | CDS | 44475812 | 44476003 | 44475812 | ID=Msa0119950-mRNA-1:cds;Parent=Msa0119950-mRNA-1 |
| chr1_3 | CDS | 44474652 | 44474755 | 44474652 | ID=Msa0119950-mRNA-1:cds;Parent=Msa0119950-mRNA-1 |
| chr1_3 | CDS | 44474442 | 44474529 | 44474442 | ID=Msa0119950-mRNA-1:cds;Parent=Msa0119950-mRNA-1 |
| chr1_3 | CDS | 44472924 | 44473070 | 44472924 | ID=Msa0119950-mRNA-1:cds;Parent=Msa0119950-mRNA-1 |
| chr1_3 | CDS | 44472360 | 44472485 | 44472360 | ID=Msa0119950-mRNA-1:cds;Parent=Msa0119950-mRNA-1 |
| chr1_3 | CDS | 44471946 | 44472116 | 44471946 | ID=Msa0119950-mRNA-1:cds;Parent=Msa0119950-mRNA-1 |
| chr1_3 | CDS | 44470982 | 44471041 | 44470982 | ID=Msa0119950-mRNA-1:cds;Parent=Msa0119950-mRNA-1 |
| chr1_3 | CDS | 44470753 | 44470872 | 44470753 | ID=Msa0119950-mRNA-1:cds;Parent=Msa0119950-mRNA-1 |
| chr1_3 | three_prime_UTR | 44469964 | 44470752 | 44469964 | ID=Msa0119950-mRNA-1:three_prime_utr;Parent=Msa0119950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
