AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0131390


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0131390 MtrunA17_Chr1g0200431 95.224 335 15 1 1 335 3 336 0.0 608
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0131390 AT1G22700.1 59.223 309 114 5 30 335 2 301 1.30e-108 319
Msa0131390 AT1G22700.2 59.740 308 109 5 30 335 2 296 2.63e-108 318
Msa0131390 AT1G22700.3 78.894 199 42 0 130 328 6 204 3.64e-104 304

Find 124 sgRNAs with CRISPR-Local

Find 259 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAGTGTTCAATTCTAAAA+TGG 0.137389 1_3:-62208667 Msa0131390:three_prime_UTR
GATTATGTTTGAAGGAATTT+TGG 0.161799 1_3:-62208844 Msa0131390:three_prime_UTR
CTGTTGGGTTTGCTCGGGGC+TGG 0.202462 1_3:-62210272 Msa0131390:CDS
CATCTTCGATTCTTCTTCTA+AGG 0.229510 1_3:+62212202 None:intergenic
TTAAGCAATGAATATATAAA+TGG 0.255206 1_3:+62208548 None:intergenic
CGCGATGGGAAGCTTGAAAA+AGG 0.299030 1_3:-62209167 Msa0131390:CDS
TGTTGGGTTTGCTCGGGGCT+GGG 0.317976 1_3:-62210271 Msa0131390:CDS
TACAACTCACACTATAAATA+TGG 0.318327 1_3:-62208903 Msa0131390:three_prime_UTR
AATCATTGATGTTTATGTTC+TGG 0.323312 1_3:-62208510 Msa0131390:three_prime_UTR
TGCTTCAAGCTATTGAGAAA+TGG 0.326316 1_3:-62209689 Msa0131390:CDS
GGCATAGTTGAGGTAAAATA+TGG 0.339217 1_3:-62208715 Msa0131390:three_prime_UTR
GGTAGATTGAAAAGTGGATT+TGG 0.345980 1_3:+62212106 None:intergenic
TTTAGAATTGAACACTGAAT+TGG 0.353249 1_3:+62208671 None:intergenic
GGCCGTGCAATCTTGTTGTT+AGG 0.361482 1_3:+62209008 None:intergenic
GAAAGAGAAGGAGAAGAGTA+AGG 0.371916 1_3:+62212143 None:intergenic
GCAGTAGCAAGTATATTAGT+TGG 0.384763 1_3:+62210294 None:intergenic
CTACTGCTGTTGGGTTTGCT+CGG 0.387033 1_3:-62210278 Msa0131390:CDS
GCCTTGGGAATTCAGCAAAC+AGG 0.388920 1_3:-62211680 Msa0131390:CDS
AATATCTTGATTATGTTTGA+AGG 0.391871 1_3:-62208852 Msa0131390:three_prime_UTR
TGGTGAGTTTAGAAGAGGTA+AGG 0.394197 1_3:+62212084 None:intergenic
CAGTGGAAAATCTTCAAGAT+TGG 0.395260 1_3:-62210454 Msa0131390:CDS
AACACATACACACACCTTGC+CGG 0.398910 1_3:-62212267 Msa0131390:five_prime_UTR
TTACAGAAAGATTAAAGCCT+TGG 0.400133 1_3:-62211696 Msa0131390:intron
TCAGTGTTCAATTCTAAAAT+GGG 0.407002 1_3:-62208666 Msa0131390:three_prime_UTR
CAAGAATGCCGAAACCCATT+TGG 0.407616 1_3:+62210421 None:intergenic
TACTGCTGTTGGGTTTGCTC+GGG 0.408318 1_3:-62210277 Msa0131390:CDS
TGTCAATTACTTAATGCTAA+TGG 0.410849 1_3:-62208736 Msa0131390:three_prime_UTR
GCTTCAAGCTATTGAGAAAT+GGG 0.415882 1_3:-62209688 Msa0131390:CDS
GAAGATAAATGAGATGTATC+AGG 0.418389 1_3:-62210342 Msa0131390:CDS
AAGGTGTTACTGTCAGATAT+AGG 0.419915 1_3:-62208947 Msa0131390:CDS
AGGTGTTACTGTCAGATATA+GGG 0.420068 1_3:-62208946 Msa0131390:CDS
CCCTGTTTGCTGAATTCCCA+AGG 0.422052 1_3:+62211679 None:intergenic
AATATACTTGCTACTGCTGT+TGG 0.422402 1_3:-62210288 Msa0131390:CDS
TACAGAAAGATTAAAGCCTT+GGG 0.422829 1_3:-62211695 Msa0131390:intron
GTCAGTTCCTTCCTTCCGAT+GGG 0.422903 1_3:+62212293 None:intergenic
TGTCAGTTCCTTCCTTCCGA+TGG 0.424892 1_3:+62212292 None:intergenic
GTAAGGGAAATGAGTGAAAG+TGG 0.427395 1_3:+62212160 None:intergenic
GATTCTTTGAAGGAACTTGT+TGG 0.432188 1_3:-62208978 Msa0131390:CDS
AGCAAGAACTTGGTAGCAGC+TGG 0.444627 1_3:+62209708 None:intergenic
TGGCTCTAGTGATGTATTCA+AGG 0.447573 1_3:-62208824 Msa0131390:three_prime_UTR
ATATACTTGCTACTGCTGTT+GGG 0.457513 1_3:-62210287 Msa0131390:CDS
TAAATGAGATGTATCAGGTC+GGG 0.460099 1_3:-62210337 Msa0131390:CDS
GAAATGGGATGGAGAAAGTC+AGG 0.462836 1_3:-62209673 Msa0131390:CDS
GTCACAGCATGGAACAATCT+TGG 0.463501 1_3:-62209101 Msa0131390:CDS
CAAGAGTAGGATTCTACTCC+AGG 0.474183 1_3:-62211624 Msa0131390:intron
CTTGCAACTCTTTAGCAGAA+AGG 0.474641 1_3:+62210204 None:intergenic
TTCCATGCTGTGACATAGCC+TGG 0.480857 1_3:+62209110 None:intergenic
GGTGAGTTTAGAAGAGGTAA+GGG 0.481050 1_3:+62212085 None:intergenic
ATTGGAGAAAGTCATCCAAA+TGG 0.481527 1_3:-62210436 Msa0131390:CDS
GCTCTCTGCGGACAAGAACT+TGG 0.483373 1_3:+62210231 None:intergenic
AAAGTCATCCAAATGGGTTT+CGG 0.484180 1_3:-62210429 Msa0131390:CDS
GCGACTGAGCTGTTTGAACT+TGG 0.485378 1_3:-62209759 Msa0131390:CDS
TTGGAGAAAGTCATCCAAAT+GGG 0.495515 1_3:-62210435 Msa0131390:CDS
TTATAGTGTGAGTTGTAGAA+TGG 0.496461 1_3:+62208909 None:intergenic
AATAGCTTGAAGCAAGAACT+TGG 0.496680 1_3:+62209698 None:intergenic
ATATAGGTTTACAACGCTCT+TGG 0.496693 1_3:-62209203 Msa0131390:intron
TAGTTGAGGTAAAATATGGC+TGG 0.500436 1_3:-62208711 Msa0131390:three_prime_UTR
ATGGTTATAAGGGGTTCCAT+TGG 0.504983 1_3:+62211248 None:intergenic
AAAATATGGCTGGGAACGGT+TGG 0.509872 1_3:-62208701 Msa0131390:three_prime_UTR
TGTTTGTTCCTAAATTAGAC+AGG 0.510919 1_3:+62212226 None:intergenic
AAAGAGAAGGAGAAGAGTAA+GGG 0.517442 1_3:+62212144 None:intergenic
AGAATATCCGTCTGCACTGA+AGG 0.520074 1_3:-62209057 Msa0131390:CDS
TTCCTTCAAAGAATCTCTCC+TGG 0.520808 1_3:+62208986 None:intergenic
GGATTTGGAAGGGAAGATAG+AGG 0.525986 1_3:+62212121 None:intergenic
TCACTTGCATATGAAACATC+AGG 0.526055 1_3:+62210371 None:intergenic
GATTGAAAAGTGGATTTGGA+AGG 0.528225 1_3:+62212110 None:intergenic
GTCGGGGAGTTGTTTGACTT+AGG 0.529260 1_3:-62210320 Msa0131390:CDS
GGTGTCAGTTATGTTCGCGA+TGG 0.530417 1_3:-62209182 Msa0131390:CDS
ACCATTCTACCAAAATAAGA+AGG 0.534831 1_3:+62208789 None:intergenic
TAGAATTACTTGAATGAGCA+TGG 0.537754 1_3:+62212053 None:intergenic
ACAACAAGATTGCACGGCCC+AGG 0.538823 1_3:-62209004 Msa0131390:CDS
ATATATAAATGGCAAGTTCG+TGG 0.541905 1_3:+62208559 None:intergenic
GTGTCAGTTATGTTCGCGAT+GGG 0.546218 1_3:-62209181 Msa0131390:CDS
GGTAAGGGTAGATTGAAAAG+TGG 0.546273 1_3:+62212100 None:intergenic
TCCTTCAAAGAATCTCTCCT+GGG 0.546723 1_3:+62208987 None:intergenic
TCCTACTCTTGACTGTATCA+AGG 0.546925 1_3:+62211636 None:intergenic
TTACAATGCATGAAAACAGC+CGG 0.555612 1_3:+62208600 None:intergenic
GCCCAGGAGAGATTCTTTGA+AGG 0.556482 1_3:-62208988 Msa0131390:CDS
GACGAAGACAGATGTTTCAA+AGG 0.556964 1_3:-62211277 Msa0131390:intron
GGCTGGGAACGGTTGGAAGA+CGG 0.560661 1_3:-62208694 Msa0131390:three_prime_UTR
ATCCTAACAACAAGATTGCA+CGG 0.562865 1_3:-62209010 Msa0131390:CDS
AACTTGGTGCAGTGATGTTG+CGG 0.566153 1_3:-62209743 Msa0131390:CDS
AAATGAGATGTATCAGGTCG+GGG 0.569807 1_3:-62210336 Msa0131390:CDS
CCTTGGGAATTCAGCAAACA+GGG 0.575011 1_3:-62211679 Msa0131390:CDS
ACTTTGTCCTTAGTAAAACA+TGG 0.575100 1_3:-62208475 Msa0131390:three_prime_UTR
TGAAGTGGTGAGTTTAGAAG+AGG 0.575676 1_3:+62212079 None:intergenic
TCAAATGCCTTCAGTGCAGA+CGG 0.577765 1_3:+62209050 None:intergenic
ACTGCTGTTGGGTTTGCTCG+GGG 0.578511 1_3:-62210276 Msa0131390:CDS
AGTTGAGGTAAAATATGGCT+GGG 0.578608 1_3:-62208710 Msa0131390:three_prime_UTR
TTGGTAGAATGGTGATAACA+AGG 0.579796 1_3:-62208779 Msa0131390:three_prime_UTR
GGGAAGATAGAGGAAAGAGA+AGG 0.581551 1_3:+62212131 None:intergenic
TTTGTGAAAATGGTTATAAG+GGG 0.582953 1_3:+62211239 None:intergenic
ATAAATGGCAAGTTCGTGGA+AGG 0.586016 1_3:+62208563 None:intergenic
CAAACAGGGTCCACTCCACA+TGG 0.587054 1_3:-62211665 Msa0131390:CDS
ATGACACCCCATCGGAAGGA+AGG 0.591351 1_3:-62212300 Msa0131390:five_prime_UTR
ATTGAAAAGTGGATTTGGAA+GGG 0.595639 1_3:+62212111 None:intergenic
GCAAGAACTTGGTAGCAGCT+GGG 0.602600 1_3:+62209709 None:intergenic
CAAGCTATTGAGAAATGGGA+TGG 0.608067 1_3:-62209684 Msa0131390:CDS
AGGTAAAATATGGCTGGGAA+CGG 0.608912 1_3:-62208705 Msa0131390:three_prime_UTR
GTTTCAAAGGACAATGCCAA+TGG 0.609689 1_3:-62211264 Msa0131390:CDS
TAATGCTAATGGCATAGTTG+AGG 0.614779 1_3:-62208725 Msa0131390:three_prime_UTR
AAGGTTGTCTCCATGTGGAG+TGG 0.617242 1_3:+62211655 None:intergenic
AGAAAGTCAGGATCTTGCAC+AGG 0.618105 1_3:-62209661 Msa0131390:intron
TTAGATGACACCCCATCGGA+AGG 0.624311 1_3:-62212304 Msa0131390:five_prime_UTR
AACCAGGCTATGTCACAGCA+TGG 0.630192 1_3:-62209112 Msa0131390:CDS
AGAACAGGGGTTATCCGGCA+AGG 0.630194 1_3:+62212253 None:intergenic
GAATCGAAGATGAAGATGAG+TGG 0.647123 1_3:-62212191 Msa0131390:exon
GAATGAGCATGGTGATGAAG+TGG 0.647716 1_3:+62212064 None:intergenic
GAACTTGTTGGAATGACGAA+AGG 0.650620 1_3:-62208966 Msa0131390:CDS
ATAAATGAGATGTATCAGGT+CGG 0.651955 1_3:-62210338 Msa0131390:CDS
TGGCATACTTGAAAATACAC+AGG 0.652514 1_3:-62208883 Msa0131390:three_prime_UTR
TCAGTTCCTTCCTTCCGATG+GGG 0.653132 1_3:+62212294 None:intergenic
TAGATTAGATGACACCCCAT+CGG 0.656218 1_3:-62212308 Msa0131390:five_prime_UTR
GTTATAAAAGAAAGAAAACA+AGG 0.656972 1_3:+62208622 None:intergenic
CTCAGGGAATGACTTTACAG+TGG 0.658371 1_3:-62210471 Msa0131390:intron
TCTCAGGAGCAAGTCAGAAG+CGG 0.661265 1_3:-62209792 Msa0131390:intron
GTATCAAGGTTGTCTCCATG+TGG 0.667949 1_3:+62211650 None:intergenic
ACCTTGATACAGTCAAGAGT+AGG 0.669920 1_3:-62211637 Msa0131390:CDS
AAAGCTGTGAATATTCAACC+AGG 0.675945 1_3:-62209128 Msa0131390:CDS
AAAATGGGTTACAAAAGCCG+TGG 0.683895 1_3:-62208651 Msa0131390:three_prime_UTR
TTGGTGCAGTGATGTTGCGG+AGG 0.713741 1_3:-62209740 Msa0131390:CDS
CAGAAAGGTCAAGCTCTCTG+CGG 0.715909 1_3:+62210219 None:intergenic
AGAAAACAAGGAATTCACCA+CGG 0.721487 1_3:+62208634 None:intergenic
TGTTTCATATGCAAGTGACT+CGG 0.725351 1_3:-62210366 Msa0131390:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GCTTTAATCTTTTAATAAAA+GGG + chr1_3:62208773-62208792 None:intergenic 15.0%
!!! AGCTTTAATCTTTTAATAAA+AGG + chr1_3:62208774-62208793 None:intergenic 15.0%
!!! TCTTTATATTTTCTTAATCT+TGG + chr1_3:62209829-62209848 None:intergenic 15.0%
!!! AATTAATATTTTATCTGGTT+AGG - chr1_3:62209982-62210001 Msa0131390:intron 15.0%
!!! CATTTACTTTTTTGAAATTA+TGG - chr1_3:62210206-62210225 Msa0131390:CDS 15.0%
!! CTAGTAAAATAAGTTATATA+TGG - chr1_3:62211173-62211192 Msa0131390:intron 15.0%
!! TAAGTTATATATGGTTAATT+TGG - chr1_3:62211182-62211201 Msa0131390:intron 15.0%
!! TTAAGCAATGAATATATAAA+TGG + chr1_3:62212246-62212265 None:intergenic 15.0%
!!! TCATTGCTTAAATAATTTTT+TGG - chr1_3:62212255-62212274 Msa0131390:five_prime_UTR 15.0%
!!! CTTTAACAACATATTTTCAT+GGG - chr1_3:62208792-62208811 Msa0131390:three_prime_UTR 20.0%
!!! TTTAACAACATATTTTCATG+GGG - chr1_3:62208793-62208812 Msa0131390:three_prime_UTR 20.0%
!! ACATCAATGATATTATTAAG+TGG + chr1_3:62209237-62209256 None:intergenic 20.0%
!!! TTTTGTGAAAATGGTTATAA+GGG + chr1_3:62209556-62209575 None:intergenic 20.0%
!! TTTATCAAGATAAAACTAAC+GGG + chr1_3:62209744-62209763 None:intergenic 20.0%
!! GTTTATCAAGATAAAACTAA+CGG + chr1_3:62209745-62209764 None:intergenic 20.0%
!! ATATATCTCGATCATTATAT+CGG + chr1_3:62209783-62209802 None:intergenic 20.0%
!!! ATTTACTTTTCCAAATTACT+AGG - chr1_3:62209910-62209929 Msa0131390:intron 20.0%
!! AAAGAGTTTCGAAAATTAAA+GGG + chr1_3:62210067-62210086 None:intergenic 20.0%
!! TAAAGAGTTTCGAAAATTAA+AGG + chr1_3:62210068-62210087 None:intergenic 20.0%
!! CAGAAAGAGAATATTAAAAA+AGG + chr1_3:62210296-62210315 None:intergenic 20.0%
!!! CTTTTTTAATATTCTCTTTC+TGG - chr1_3:62210294-62210313 Msa0131390:CDS 20.0%
!! ATCCAAATCCATTAAATTTA+GGG + chr1_3:62210677-62210696 None:intergenic 20.0%
!! AATCCAAATCCATTAAATTT+AGG + chr1_3:62210678-62210697 None:intergenic 20.0%
!! AAATTAGATTTAAACGATCT+CGG + chr1_3:62210760-62210779 None:intergenic 20.0%
!! TACAGTAAACATGTAAAATT+TGG + chr1_3:62210880-62210899 None:intergenic 20.0%
!! AATATCTTGATTATGTTTGA+AGG - chr1_3:62211939-62211958 Msa0131390:intron 20.0%
!!! AACTTTTTTCCTTCTTATTT+TGG - chr1_3:62211993-62212012 Msa0131390:intron 20.0%
!! GTTATAAAAGAAAGAAAACA+AGG + chr1_3:62212172-62212191 None:intergenic 20.0%
!!! TGTTTTCTTTCTTTTATAAC+CGG - chr1_3:62212172-62212191 Msa0131390:CDS 20.0%
!! TTCTTTTTCCTGTCTAATTT+AGG - chr1_3:62208557-62208576 Msa0131390:three_prime_UTR 25.0%
!! GCTTTAACAACATATTTTCA+TGG - chr1_3:62208791-62208810 Msa0131390:three_prime_UTR 25.0%
!! TAAATTCTGTAACTGTTTCT+TGG - chr1_3:62208869-62208888 Msa0131390:three_prime_UTR 25.0%
!! AAATTCTGTAACTGTTTCTT+GGG - chr1_3:62208870-62208889 Msa0131390:three_prime_UTR 25.0%
!! GTCATTGAGTTAATTTTGTT+AGG + chr1_3:62209272-62209291 None:intergenic 25.0%
! TTATGAATGAAGTTCATGTT+TGG + chr1_3:62209387-62209406 None:intergenic 25.0%
! GTTCAAGACAAAACTAATAT+TGG + chr1_3:62209412-62209431 None:intergenic 25.0%
! TTTGTGAAAATGGTTATAAG+GGG + chr1_3:62209555-62209574 None:intergenic 25.0%
!! GTTTTGTGAAAATGGTTATA+AGG + chr1_3:62209557-62209576 None:intergenic 25.0%
! AAATTGAAAGAACGAAAACA+GGG + chr1_3:62209599-62209618 None:intergenic 25.0%
! AAAATTGAAAGAACGAAAAC+AGG + chr1_3:62209600-62209619 None:intergenic 25.0%
!!! GAAAAATGAAACTTGTTGTA+AGG - chr1_3:62209675-62209694 Msa0131390:CDS 25.0%
! ATGTGATTAACCTAGTAATT+TGG + chr1_3:62209923-62209942 None:intergenic 25.0%
!! CATAAACAATTCTGAACTTT+TGG + chr1_3:62210245-62210264 None:intergenic 25.0%
! AGATTAGACCCTAAATTTAA+TGG - chr1_3:62210666-62210685 Msa0131390:intron 25.0%
!!! TGTATGATTCTGTTTTTATC+TGG - chr1_3:62210896-62210915 Msa0131390:intron 25.0%
!! GGTTAATTTGGAATTTACTT+TGG - chr1_3:62211194-62211213 Msa0131390:intron 25.0%
!! ATTTGGAATTTACTTTGGAT+TGG - chr1_3:62211199-62211218 Msa0131390:intron 25.0%
!! ATTTACTTTGGATTGGAAAT+AGG - chr1_3:62211206-62211225 Msa0131390:intron 25.0%
!!! CATATTTTGGTGATGTATTA+CGG + chr1_3:62211237-62211256 None:intergenic 25.0%
! TTGTACAATTCTACCATTAT+TGG - chr1_3:62211507-62211526 Msa0131390:intron 25.0%
!! AACCTATATTGATTGATTTC+AGG + chr1_3:62211577-62211596 None:intergenic 25.0%
! TACAACTCACACTATAAATA+TGG - chr1_3:62211888-62211907 Msa0131390:intron 25.0%
!! GATTATGTTTGAAGGAATTT+TGG - chr1_3:62211947-62211966 Msa0131390:intron 25.0%
! TGTCAATTACTTAATGCTAA+TGG - chr1_3:62212055-62212074 Msa0131390:intron 25.0%
!! TTTAGAATTGAACACTGAAT+TGG + chr1_3:62212123-62212142 None:intergenic 25.0%
!! TTCAGTGTTCAATTCTAAAA+TGG - chr1_3:62212124-62212143 Msa0131390:CDS 25.0%
!!! TCAGTGTTCAATTCTAAAAT+GGG - chr1_3:62212125-62212144 Msa0131390:CDS 25.0%
! AATCATTGATGTTTATGTTC+TGG - chr1_3:62212281-62212300 Msa0131390:five_prime_UTR 25.0%
ATTAGACAGGAAAAAGAACA+GGG + chr1_3:62208555-62208574 None:intergenic 30.0%
AATTAGACAGGAAAAAGAAC+AGG + chr1_3:62208556-62208575 None:intergenic 30.0%
TGTTTGTTCCTAAATTAGAC+AGG + chr1_3:62208568-62208587 None:intergenic 30.0%
! ATTGAAAAGTGGATTTGGAA+GGG + chr1_3:62208683-62208702 None:intergenic 30.0%
TAGAATTACTTGAATGAGCA+TGG + chr1_3:62208741-62208760 None:intergenic 30.0%
AAACACATGCAAATTGGAAA+AGG + chr1_3:62208912-62208931 None:intergenic 30.0%
!!! TAGTTTTGTTACACTCTTAG+AGG - chr1_3:62209010-62209029 Msa0131390:CDS 30.0%
!!! AGTTTTGTTACACTCTTAGA+GGG - chr1_3:62209011-62209030 Msa0131390:CDS 30.0%
! TGCATGTTGATTGTTTAACT+TGG - chr1_3:62209064-62209083 Msa0131390:CDS 30.0%
TTACAGAAAGATTAAAGCCT+TGG - chr1_3:62209095-62209114 Msa0131390:CDS 30.0%
TACAGAAAGATTAAAGCCTT+GGG - chr1_3:62209096-62209115 Msa0131390:CDS 30.0%
!!! TCAATGACTTGCTTTTACTA+AGG - chr1_3:62209284-62209303 Msa0131390:intron 30.0%
AAATTAGTAGCCAGAAATCA+AGG + chr1_3:62209470-62209489 None:intergenic 30.0%
TATAAAGAAAAGTGATCACG+AGG - chr1_3:62209841-62209860 Msa0131390:intron 30.0%
TACTAGGTTAATCACATAAG+TGG - chr1_3:62209926-62209945 Msa0131390:intron 30.0%
!! GTTTATTATTGACTCCATGA+AGG + chr1_3:62210110-62210129 None:intergenic 30.0%
GAAGATAAATGAGATGTATC+AGG - chr1_3:62210449-62210468 Msa0131390:CDS 30.0%
ATAAATGAGATGTATCAGGT+CGG - chr1_3:62210453-62210472 Msa0131390:CDS 30.0%
!! GACCCTAAATTTAATGGATT+TGG - chr1_3:62210672-62210691 Msa0131390:intron 30.0%
TAATCTGAATTGTCTGATCT+CGG - chr1_3:62210790-62210809 Msa0131390:intron 30.0%
AAACATGTAAAATTTGGACC+CGG + chr1_3:62210874-62210893 None:intergenic 30.0%
ATAAAACAGCTAATTCCAAG+TGG + chr1_3:62210947-62210966 None:intergenic 30.0%
ACAATGGAAGAAAATGAGAA+AGG + chr1_3:62210980-62210999 None:intergenic 30.0%
ACCAAAATATGATACACCAT+AGG - chr1_3:62211246-62211265 Msa0131390:CDS 30.0%
! ACCTATGGTGTATCATATTT+TGG + chr1_3:62211250-62211269 None:intergenic 30.0%
TACAACTACTAGTGTTTGAA+CGG + chr1_3:62211492-62211511 None:intergenic 30.0%
ACAATTCTACCATTATTGGT+CGG - chr1_3:62211511-62211530 Msa0131390:intron 30.0%
ATATCAAAACCGACCAATAA+TGG + chr1_3:62211523-62211542 None:intergenic 30.0%
TTCAAAGTAGTTGTCAACAA+GGG + chr1_3:62211546-62211565 None:intergenic 30.0%
TTTCAAAGTAGTTGTCAACA+AGG + chr1_3:62211547-62211566 None:intergenic 30.0%
TGCCTGAAATCAATCAATAT+AGG - chr1_3:62211572-62211591 Msa0131390:intron 30.0%
TTATAGTGTGAGTTGTAGAA+TGG + chr1_3:62211885-62211904 None:intergenic 30.0%
!!! TCCTTCTTATTTTGGTAGAA+TGG - chr1_3:62212001-62212020 Msa0131390:intron 30.0%
ACCATTCTACCAAAATAAGA+AGG + chr1_3:62212005-62212024 None:intergenic 30.0%
ATATATAAATGGCAAGTTCG+TGG + chr1_3:62212235-62212254 None:intergenic 30.0%
ACTTTGTCCTTAGTAAAACA+TGG - chr1_3:62212316-62212335 Msa0131390:five_prime_UTR 30.0%
TTAGACAGGAAAAAGAACAG+GGG + chr1_3:62208554-62208573 None:intergenic 35.0%
CATCTTCGATTCTTCTTCTA+AGG + chr1_3:62208592-62208611 None:intergenic 35.0%
AAAGAGAAGGAGAAGAGTAA+GGG + chr1_3:62208650-62208669 None:intergenic 35.0%
! GATTGAAAAGTGGATTTGGA+AGG + chr1_3:62208684-62208703 None:intergenic 35.0%
! GGTAGATTGAAAAGTGGATT+TGG + chr1_3:62208688-62208707 None:intergenic 35.0%
TTCCAATTTGCATGTGTTTG+TGG - chr1_3:62208913-62208932 Msa0131390:three_prime_UTR 35.0%
! AATTGAGCAGTGATTTGTGT+TGG - chr1_3:62208945-62208964 Msa0131390:CDS 35.0%
! ATTGAGCAGTGATTTGTGTT+GGG - chr1_3:62208946-62208965 Msa0131390:CDS 35.0%
GACATGAAATGAAAACAACC+TGG + chr1_3:62209188-62209207 None:intergenic 35.0%
! TGCTTTTACTAAGGCATGTT+CGG - chr1_3:62209293-62209312 Msa0131390:intron 35.0%
! GAAGTTCATGTTTGGAATCA+CGG + chr1_3:62209379-62209398 None:intergenic 35.0%
ATGTTCACAACCTTGATTTC+TGG - chr1_3:62209457-62209476 Msa0131390:intron 35.0%
!! CTCGGATTGTTTTGTGAAAA+TGG + chr1_3:62209565-62209584 None:intergenic 35.0%
AACAGGGAATTACTTACTCT+CGG + chr1_3:62209583-62209602 None:intergenic 35.0%
TTTGCATACCATGAGTGAAT+TGG - chr1_3:62209636-62209655 Msa0131390:intron 35.0%
! TTCCTGATATCATGTTTTCC+AGG - chr1_3:62209715-62209734 Msa0131390:CDS 35.0%
! TCCTGATATCATGTTTTCCA+GGG - chr1_3:62209716-62209735 Msa0131390:CDS 35.0%
ATATCGGTACATTGTTTCAG+AGG + chr1_3:62209767-62209786 None:intergenic 35.0%
AATCTTGGCAGAATAGTCAA+TGG + chr1_3:62209814-62209833 None:intergenic 35.0%
TAATATCAAGATCACGAGTG+AGG - chr1_3:62210030-62210049 Msa0131390:intron 35.0%
TTATATTGCCCATTCATCTC+AGG + chr1_3:62210148-62210167 None:intergenic 35.0%
AAAAGGTAATGACTCAAGTG+TGG + chr1_3:62210279-62210298 None:intergenic 35.0%
TATTCTCTTTCTGGATTCTC+AGG - chr1_3:62210303-62210322 Msa0131390:CDS 35.0%
ATTCTCTTTCTGGATTCTCA+GGG - chr1_3:62210304-62210323 Msa0131390:CDS 35.0%
CAGTGGAAAATCTTCAAGAT+TGG - chr1_3:62210337-62210356 Msa0131390:CDS 35.0%
ATTGGAGAAAGTCATCCAAA+TGG - chr1_3:62210355-62210374 Msa0131390:CDS 35.0%
TTGGAGAAAGTCATCCAAAT+GGG - chr1_3:62210356-62210375 Msa0131390:CDS 35.0%
! AAAGTCATCCAAATGGGTTT+CGG - chr1_3:62210362-62210381 Msa0131390:CDS 35.0%
TCACTTGCATATGAAACATC+AGG + chr1_3:62210423-62210442 None:intergenic 35.0%
TGTTTCATATGCAAGTGACT+CGG - chr1_3:62210425-62210444 Msa0131390:CDS 35.0%
TAAATGAGATGTATCAGGTC+GGG - chr1_3:62210454-62210473 Msa0131390:CDS 35.0%
GCAGTAGCAAGTATATTAGT+TGG + chr1_3:62210500-62210519 None:intergenic 35.0%
! AATATACTTGCTACTGCTGT+TGG - chr1_3:62210503-62210522 Msa0131390:intron 35.0%
! ATATACTTGCTACTGCTGTT+GGG - chr1_3:62210504-62210523 Msa0131390:intron 35.0%
AGTAATACAAATGACACTGC+AGG + chr1_3:62210619-62210638 None:intergenic 35.0%
GTTTCTCTTGAACACATAGA+AGG - chr1_3:62210643-62210662 Msa0131390:intron 35.0%
! TCATTTTCTTCCATTGTCTC+AGG - chr1_3:62210983-62211002 Msa0131390:intron 35.0%
AATAGCTTGAAGCAAGAACT+TGG + chr1_3:62211096-62211115 None:intergenic 35.0%
TGCTTCAAGCTATTGAGAAA+TGG - chr1_3:62211102-62211121 Msa0131390:intron 35.0%
GCTTCAAGCTATTGAGAAAT+GGG - chr1_3:62211103-62211122 Msa0131390:intron 35.0%
ATATAGGTTTACAACGCTCT+TGG - chr1_3:62211588-62211607 Msa0131390:intron 35.0%
AAAGCTGTGAATATTCAACC+AGG - chr1_3:62211663-62211682 Msa0131390:CDS 35.0%
ATCCTAACAACAAGATTGCA+CGG - chr1_3:62211781-62211800 Msa0131390:intron 35.0%
! GATTCTTTGAAGGAACTTGT+TGG - chr1_3:62211813-62211832 Msa0131390:intron 35.0%
!! AAGGTGTTACTGTCAGATAT+AGG - chr1_3:62211844-62211863 Msa0131390:intron 35.0%
!! AGGTGTTACTGTCAGATATA+GGG - chr1_3:62211845-62211864 Msa0131390:intron 35.0%
TGGCATACTTGAAAATACAC+AGG - chr1_3:62211908-62211927 Msa0131390:intron 35.0%
TTGGTAGAATGGTGATAACA+AGG - chr1_3:62212012-62212031 Msa0131390:intron 35.0%
TAATGCTAATGGCATAGTTG+AGG - chr1_3:62212066-62212085 Msa0131390:CDS 35.0%
GGCATAGTTGAGGTAAAATA+TGG - chr1_3:62212076-62212095 Msa0131390:CDS 35.0%
TAGTTGAGGTAAAATATGGC+TGG - chr1_3:62212080-62212099 Msa0131390:CDS 35.0%
AGTTGAGGTAAAATATGGCT+GGG - chr1_3:62212081-62212100 Msa0131390:CDS 35.0%
AGAAAACAAGGAATTCACCA+CGG + chr1_3:62212160-62212179 None:intergenic 35.0%
TTACAATGCATGAAAACAGC+CGG + chr1_3:62212194-62212213 None:intergenic 35.0%
TAGATTAGATGACACCCCAT+CGG - chr1_3:62208483-62208502 Msa0131390:three_prime_UTR 40.0%
GAAAAAGAACAGGGGTTATC+CGG + chr1_3:62208546-62208565 None:intergenic 40.0%
GAATCGAAGATGAAGATGAG+TGG - chr1_3:62208600-62208619 Msa0131390:three_prime_UTR 40.0%
GTAAGGGAAATGAGTGAAAG+TGG + chr1_3:62208634-62208653 None:intergenic 40.0%
GAAAGAGAAGGAGAAGAGTA+AGG + chr1_3:62208651-62208670 None:intergenic 40.0%
GGTAAGGGTAGATTGAAAAG+TGG + chr1_3:62208694-62208713 None:intergenic 40.0%
GGTGAGTTTAGAAGAGGTAA+GGG + chr1_3:62208709-62208728 None:intergenic 40.0%
TGGTGAGTTTAGAAGAGGTA+AGG + chr1_3:62208710-62208729 None:intergenic 40.0%
TGAAGTGGTGAGTTTAGAAG+AGG + chr1_3:62208715-62208734 None:intergenic 40.0%
AGCCACAAACACATGCAAAT+TGG + chr1_3:62208918-62208937 None:intergenic 40.0%
! AGTGATTTGTGTTGGGACTT+GGG - chr1_3:62208953-62208972 Msa0131390:CDS 40.0%
ACCTTGATACAGTCAAGAGT+AGG - chr1_3:62209154-62209173 Msa0131390:CDS 40.0%
TCCTACTCTTGACTGTATCA+AGG + chr1_3:62209158-62209177 None:intergenic 40.0%
!! GTGAGTTTTTGGGAGAATCA+TGG - chr1_3:62209323-62209342 Msa0131390:intron 40.0%
CTGTCTTCGTCAATGATAGA+AGG + chr1_3:62209505-62209524 None:intergenic 40.0%
GACGAAGACAGATGTTTCAA+AGG - chr1_3:62209514-62209533 Msa0131390:intron 40.0%
GTTTCAAAGGACAATGCCAA+TGG - chr1_3:62209527-62209546 Msa0131390:intron 40.0%
ATGGTTATAAGGGGTTCCAT+TGG + chr1_3:62209546-62209565 None:intergenic 40.0%
ACATGACACCAATTCACTCA+TGG + chr1_3:62209647-62209666 None:intergenic 40.0%
TCCCTGGAAAACATGATATC+AGG + chr1_3:62209720-62209739 None:intergenic 40.0%
AAAGTGATCACGAGGTTTGT+AGG - chr1_3:62209849-62209868 Msa0131390:intron 40.0%
AAGTGATCACGAGGTTTGTA+GGG - chr1_3:62209850-62209869 Msa0131390:intron 40.0%
AGTGGATATAGACTATGTGC+AGG - chr1_3:62209944-62209963 Msa0131390:intron 40.0%
ATGCTTTGATGCAACCTTCA+TGG - chr1_3:62210093-62210112 Msa0131390:intron 40.0%
TGTTGAGACCTGAGATGAAT+GGG - chr1_3:62210137-62210156 Msa0131390:intron 40.0%
AAATGAGATGTATCAGGTCG+GGG - chr1_3:62210455-62210474 Msa0131390:CDS 40.0%
CTTGCAACTCTTTAGCAGAA+AGG + chr1_3:62210590-62210609 None:intergenic 40.0%
GTTTACTGCATGAAACTGTG+TGG - chr1_3:62210829-62210848 Msa0131390:intron 40.0%
CTGTGTGGAGTTATAACTGT+AGG - chr1_3:62210844-62210863 Msa0131390:intron 40.0%
AGTTATAACTGTAGGCGATC+CGG - chr1_3:62210852-62210871 Msa0131390:intron 40.0%
! AGTGGCTTGTGTATATGTCA+TGG + chr1_3:62210929-62210948 None:intergenic 40.0%
TGACATATACACAAGCCACT+TGG - chr1_3:62210929-62210948 Msa0131390:intron 40.0%
CAAGCTATTGAGAAATGGGA+TGG - chr1_3:62211107-62211126 Msa0131390:intron 40.0%
CATAGGTGCCAAATGTACAT+CGG - chr1_3:62211263-62211282 Msa0131390:CDS 40.0%
GTGACAAACCGATGTACATT+TGG + chr1_3:62211274-62211293 None:intergenic 40.0%
AGTGTTTGAACGGTTGCAAA+GGG + chr1_3:62211482-62211501 None:intergenic 40.0%
TAGTGTTTGAACGGTTGCAA+AGG + chr1_3:62211483-62211502 None:intergenic 40.0%
TCCTTCAAAGAATCTCTCCT+GGG + chr1_3:62211807-62211826 None:intergenic 40.0%
TTCCTTCAAAGAATCTCTCC+TGG + chr1_3:62211808-62211827 None:intergenic 40.0%
!! GAACTTGTTGGAATGACGAA+AGG - chr1_3:62211825-62211844 Msa0131390:intron 40.0%
!! TGGCTCTAGTGATGTATTCA+AGG - chr1_3:62211967-62211986 Msa0131390:intron 40.0%
AGGTAAAATATGGCTGGGAA+CGG - chr1_3:62212086-62212105 Msa0131390:CDS 40.0%
!! AAAATGGGTTACAAAAGCCG+TGG - chr1_3:62212140-62212159 Msa0131390:CDS 40.0%
ATAAATGGCAAGTTCGTGGA+AGG + chr1_3:62212231-62212250 None:intergenic 40.0%
AACACATACACACACCTTGC+CGG - chr1_3:62208524-62208543 Msa0131390:three_prime_UTR 45.0%
GGGAAGATAGAGGAAAGAGA+AGG + chr1_3:62208663-62208682 None:intergenic 45.0%
GGATTTGGAAGGGAAGATAG+AGG + chr1_3:62208673-62208692 None:intergenic 45.0%
! GAATGAGCATGGTGATGAAG+TGG + chr1_3:62208730-62208749 None:intergenic 45.0%
! CAGTGATTTGTGTTGGGACT+TGG - chr1_3:62208952-62208971 Msa0131390:CDS 45.0%
CCTTGGGAATTCAGCAAACA+GGG - chr1_3:62209112-62209131 Msa0131390:CDS 45.0%
GTATCAAGGTTGTCTCCATG+TGG + chr1_3:62209144-62209163 None:intergenic 45.0%
CAAGAGTAGGATTCTACTCC+AGG - chr1_3:62209167-62209186 Msa0131390:CDS 45.0%
CTAAGGCATGTTCGGATTGA+CGG - chr1_3:62209301-62209320 Msa0131390:intron 45.0%
! TCGGATTGACGGTGAGTTTT+TGG - chr1_3:62209312-62209331 Msa0131390:intron 45.0%
! CGGATTGACGGTGAGTTTTT+GGG - chr1_3:62209313-62209332 Msa0131390:intron 45.0%
GGTTTGTAGGGATGAACTAC+TGG - chr1_3:62209862-62209881 Msa0131390:intron 45.0%
TTCATCTCAGGTCTCAACAC+AGG + chr1_3:62210136-62210155 None:intergenic 45.0%
GTGTTGAGACCTGAGATGAA+TGG - chr1_3:62210136-62210155 Msa0131390:intron 45.0%
CTCAGGGAATGACTTTACAG+TGG - chr1_3:62210320-62210339 Msa0131390:CDS 45.0%
CAAGAATGCCGAAACCCATT+TGG + chr1_3:62210373-62210392 None:intergenic 45.0%
GTTATAACTGTAGGCGATCC+GGG - chr1_3:62210853-62210872 Msa0131390:intron 45.0%
!! AACTTGGTGCAGTGATGTTG+CGG - chr1_3:62211048-62211067 Msa0131390:intron 45.0%
GAAATGGGATGGAGAAAGTC+AGG - chr1_3:62211118-62211137 Msa0131390:intron 45.0%
AGAAAGTCAGGATCTTGCAC+AGG - chr1_3:62211130-62211149 Msa0131390:intron 45.0%
CGATGTACATTTGGCACCTA+TGG + chr1_3:62211265-62211284 None:intergenic 45.0%
GTGTCAGTTATGTTCGCGAT+GGG - chr1_3:62211610-62211629 Msa0131390:intron 45.0%
GTCACAGCATGGAACAATCT+TGG - chr1_3:62211690-62211709 Msa0131390:CDS 45.0%
AGAATATCCGTCTGCACTGA+AGG - chr1_3:62211734-62211753 Msa0131390:intron 45.0%
TCAAATGCCTTCAGTGCAGA+CGG + chr1_3:62211744-62211763 None:intergenic 45.0%
AAAATATGGCTGGGAACGGT+TGG - chr1_3:62212090-62212109 Msa0131390:CDS 45.0%
!!! AAATTAATTAATATTTTATC+TGG - chr1_3:62209977-62209996 Msa0131390:intron 5.0%
TTAGATGACACCCCATCGGA+AGG - chr1_3:62208487-62208506 Msa0131390:three_prime_UTR 50.0%
TCAGTTCCTTCCTTCCGATG+GGG + chr1_3:62208500-62208519 None:intergenic 50.0%
GTCAGTTCCTTCCTTCCGAT+GGG + chr1_3:62208501-62208520 None:intergenic 50.0%
TGTCAGTTCCTTCCTTCCGA+TGG + chr1_3:62208502-62208521 None:intergenic 50.0%
GATTTGTGTTGGGACTTGGG+AGG - chr1_3:62208956-62208975 Msa0131390:CDS 50.0%
TGTTGGGACTTGGGAGGTTT+AGG - chr1_3:62208962-62208981 Msa0131390:CDS 50.0%
GCCTTGGGAATTCAGCAAAC+AGG - chr1_3:62209111-62209130 Msa0131390:CDS 50.0%
! CCCTGTTTGCTGAATTCCCA+AGG + chr1_3:62209115-62209134 None:intergenic 50.0%
AAGGTTGTCTCCATGTGGAG+TGG + chr1_3:62209139-62209158 None:intergenic 50.0%
! ACGGTGAGTTTGACTGACTC+CGG + chr1_3:62209360-62209379 None:intergenic 50.0%
!! GATAAAACTAACGGGCTCCC+TGG + chr1_3:62209736-62209755 None:intergenic 50.0%
! GTCGGGGAGTTGTTTGACTT+AGG - chr1_3:62210471-62210490 Msa0131390:intron 50.0%
! CTACTGCTGTTGGGTTTGCT+CGG - chr1_3:62210513-62210532 Msa0131390:intron 50.0%
! TACTGCTGTTGGGTTTGCTC+GGG - chr1_3:62210514-62210533 Msa0131390:intron 50.0%
CAGAAAGGTCAAGCTCTCTG+CGG + chr1_3:62210575-62210594 None:intergenic 50.0%
!! CTGACTTGCTCCTGAGACAA+TGG + chr1_3:62210996-62211015 None:intergenic 50.0%
TCTCAGGAGCAAGTCAGAAG+CGG - chr1_3:62210999-62211018 Msa0131390:intron 50.0%
GCGACTGAGCTGTTTGAACT+TGG - chr1_3:62211032-62211051 Msa0131390:intron 50.0%
! GCAAGAACTTGGTAGCAGCT+GGG + chr1_3:62211085-62211104 None:intergenic 50.0%
! AGCAAGAACTTGGTAGCAGC+TGG + chr1_3:62211086-62211105 None:intergenic 50.0%
GTCAGGATCTTGCACAGGTT+AGG - chr1_3:62211135-62211154 Msa0131390:intron 50.0%
GGTGTCAGTTATGTTCGCGA+TGG - chr1_3:62211609-62211628 Msa0131390:intron 50.0%
CGCGATGGGAAGCTTGAAAA+AGG - chr1_3:62211624-62211643 Msa0131390:intron 50.0%
AACCAGGCTATGTCACAGCA+TGG - chr1_3:62211679-62211698 Msa0131390:CDS 50.0%
TTCCATGCTGTGACATAGCC+TGG + chr1_3:62211684-62211703 None:intergenic 50.0%
!! GGCCGTGCAATCTTGTTGTT+AGG + chr1_3:62211786-62211805 None:intergenic 50.0%
GCCCAGGAGAGATTCTTTGA+AGG - chr1_3:62211803-62211822 Msa0131390:intron 50.0%
ATGACACCCCATCGGAAGGA+AGG - chr1_3:62208491-62208510 Msa0131390:three_prime_UTR 55.0%
AGAACAGGGGTTATCCGGCA+AGG + chr1_3:62208541-62208560 None:intergenic 55.0%
CAAACAGGGTCCACTCCACA+TGG - chr1_3:62209126-62209145 Msa0131390:CDS 55.0%
!! AATCATGGTGCCACTGCCAC+CGG - chr1_3:62209338-62209357 Msa0131390:intron 55.0%
! GTGAGTTTGACTGACTCCGG+TGG + chr1_3:62209357-62209376 None:intergenic 55.0%
! ACTGCTGTTGGGTTTGCTCG+GGG - chr1_3:62210515-62210534 Msa0131390:intron 55.0%
GCTCTCTGCGGACAAGAACT+TGG + chr1_3:62210563-62210582 None:intergenic 55.0%
TTGGTGCAGTGATGTTGCGG+AGG - chr1_3:62211051-62211070 Msa0131390:intron 55.0%
ACAACAAGATTGCACGGCCC+AGG - chr1_3:62211787-62211806 Msa0131390:intron 55.0%
! TTGACTGACTCCGGTGGCAG+TGG + chr1_3:62209351-62209370 None:intergenic 60.0%
! TGTTGGGTTTGCTCGGGGCT+GGG - chr1_3:62210520-62210539 Msa0131390:intron 60.0%
GGCTGGGAACGGTTGGAAGA+CGG - chr1_3:62212097-62212116 Msa0131390:CDS 60.0%
! CTGTTGGGTTTGCTCGGGGC+TGG - chr1_3:62210519-62210538 Msa0131390:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 62208469 62212344 62208469 ID=Msa0131390;Name=Msa0131390
chr1_3 mRNA 62208469 62212344 62208469 ID=Msa0131390-mRNA-1;Parent=Msa0131390;Name=Msa0131390-mRNA-1;_AED=0.01;_eAED=0.01;_QI=140|1|1|1|0.6|0.83|6|466|335
chr1_3 exon 62208469 62209219 62208469 ID=Msa0131390-mRNA-1:exon:20723;Parent=Msa0131390-mRNA-1
chr1_3 exon 62209662 62209808 62209662 ID=Msa0131390-mRNA-1:exon:20722;Parent=Msa0131390-mRNA-1
chr1_3 exon 62210205 62210488 62210205 ID=Msa0131390-mRNA-1:exon:20721;Parent=Msa0131390-mRNA-1
chr1_3 exon 62211228 62211288 62211228 ID=Msa0131390-mRNA-1:exon:20720;Parent=Msa0131390-mRNA-1
chr1_3 exon 62211625 62211712 62211625 ID=Msa0131390-mRNA-1:exon:20719;Parent=Msa0131390-mRNA-1
chr1_3 exon 62212062 62212344 62212062 ID=Msa0131390-mRNA-1:exon:20718;Parent=Msa0131390-mRNA-1
chr1_3 five_prime_UTR 62212205 62212344 62212205 ID=Msa0131390-mRNA-1:five_prime_utr;Parent=Msa0131390-mRNA-1
chr1_3 CDS 62212062 62212204 62212062 ID=Msa0131390-mRNA-1:cds;Parent=Msa0131390-mRNA-1
chr1_3 CDS 62211625 62211712 62211625 ID=Msa0131390-mRNA-1:cds;Parent=Msa0131390-mRNA-1
chr1_3 CDS 62211228 62211288 62211228 ID=Msa0131390-mRNA-1:cds;Parent=Msa0131390-mRNA-1
chr1_3 CDS 62210205 62210488 62210205 ID=Msa0131390-mRNA-1:cds;Parent=Msa0131390-mRNA-1
chr1_3 CDS 62209662 62209808 62209662 ID=Msa0131390-mRNA-1:cds;Parent=Msa0131390-mRNA-1
chr1_3 CDS 62208935 62209219 62208935 ID=Msa0131390-mRNA-1:cds;Parent=Msa0131390-mRNA-1
chr1_3 three_prime_UTR 62208469 62208934 62208469 ID=Msa0131390-mRNA-1:three_prime_utr;Parent=Msa0131390-mRNA-1
Gene Sequence

>Msa0131390

ATGAAGATGAGTGGTTCTACTTCCACTTTCACTCATTTCCCTTACTCTTCTCCTTCTCTTTCCTCTATCTTCCCTTCCAAATCCACTTTTCAATCTACCCTTACCTCTTCTAAACTCACCACTTCATCACCATGCTCATTCAAAAAGATTAAAGCCTTGGGAATTCAGCAAACAGGGTCCACTCCACATGGAGACAACCTTGATACAGTCAAGAGTAGGATTCTACTCCAGATGTTTCAAAGGACAATGCCAATGGAACCCCTTATAACCATTTTCACAAAACAATCCGAGAGGAATGACTTTACAGTGGAAAATCTTCAAGATTGGAGAAAGTCATCCAAATGGGTTTCGGCATTCTTGTTTGCACAAACTATATCAGTTATTTCTCCTGATGTTTCATATGCAAGTGACTCGGTGAAGATAAATGAGATGTATCAGGTCGGGGAGTTGTTTGACTTAGGAATCCAACTAATATACTTGCTACTGCTGTTGGGTTTGCTCGGGGCTGGGACTTACTACGTGATTCGCCAAGTTCTTGTCCGCAGAGAGCTTGACCTTTCTGCTAAAGAGTTGCAAGAGCAAGTCAGAAGCGGTGATGCAAGTGCGACTGAGCTGTTTGAACTTGGTGCAGTGATGTTGCGGAGGAAATTTTACCCAGCTGCTACCAAGTTCTTGCTTCAAGCTATTGAGAAATGGGATGGAGAAAGTCAGGATCTTGCACAGGTTTACAACGCTCTTGGTGTCAGTTATGTTCGCGATGGGAAGCTTGAAAAAGGAATTGCTAAATTTGAGAAAGCTGTGAATATTCAACCAGGCTATGTCACAGCATGGAACAATCTTGGTGATGCATATGAAAGTAAAAAAGAATATCCGTCTGCACTGAAGGCATTTGAAGAAGTGCTTCTATTTGATCCTAACAACAAGATTGCACGGCCCAGGAGAGATTCTTTGAAGGAACTTGTTGGAATGACGAAAGGTGTTACTGTCAGATATAGGGAGAAGAAATGA

Protein sequence

>Msa0131390

MKMSGSTSTFTHFPYSSPSLSSIFPSKSTFQSTLTSSKLTTSSPCSFKKIKALGIQQTGSTPHGDNLDTVKSRILLQMFQRTMPMEPLITIFTKQSERNDFTVENLQDWRKSSKWVSAFLFAQTISVISPDVSYASDSVKINEMYQVGELFDLGIQLIYLLLLLGLLGAGTYYVIRQVLVRRELDLSAKELQEQVRSGDASATELFELGAVMLRRKFYPAATKFLLQAIEKWDGESQDLAQVYNALGVSYVRDGKLEKGIAKFEKAVNIQPGYVTAWNNLGDAYESKKEYPSALKAFEEVLLFDPNNKIARPRRDSLKELVGMTKGVTVRYREKK*