AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0163300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0163300 MtrunA17_Chr1g0178091 96.112 926 16 1 1 926 1 906 0.0 1822
Msa0163300 MtrunA17_Chr7g0266791 64.447 931 274 11 1 925 1 880 0.0 1118
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0163300 AT3G11560.3 57.760 857 312 9 58 909 45 856 0.0 969
Msa0163300 AT3G11560.2 57.760 857 312 9 58 909 45 856 0.0 969
Msa0163300 AT3G11560.4 57.760 857 312 9 58 909 45 856 0.0 969
Msa0163300 AT5G06220.3 54.341 933 365 16 1 924 1 881 0.0 931
Msa0163300 AT5G06220.2 52.725 954 373 17 1 924 1 906 0.0 902
Msa0163300 AT5G06220.1 50.645 930 352 16 1 924 1 829 0.0 823
Msa0163300 AT3G11560.1 58.375 603 208 6 58 655 45 609 0.0 704
Msa0163300 AT3G11560.5 58.375 603 208 6 58 655 45 609 0.0 704

Find 261 sgRNAs with CRISPR-Local

Find 958 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGCTGCGTTCTTCGCTTTC+TGG 0.066218 1_4:+41314795 Msa0163300:three_prime_UTR
AGGTTCCGGGTCGGGCTTTC+TGG 0.093751 1_4:-41311026 None:intergenic
CATTTGCTGTTTGCTCTTAT+TGG 0.123771 1_4:+41307792 Msa0163300:CDS
CATCCTTTCAAAAGTATATT+TGG 0.146338 1_4:-41315179 Msa0163310:intron
GAGAAGGATTTGGCTATATT+TGG 0.149892 1_4:+41307124 Msa0163300:CDS
ATTGCCTACTATTTAGTAAA+TGG 0.157021 1_4:+41302596 Msa0163300:CDS
GAATTATAAGCTTGACTTAC+AGG 0.172414 1_4:-41306314 None:intergenic
CTCAAGAGATCCAACCTTTC+TGG 0.181342 1_4:-41314623 None:intergenic
CTTCCTGGTCTGATGAAAAT+TGG 0.184892 1_4:+41314770 Msa0163300:three_prime_UTR
CCTTAACGGAAGAAAATTAT+TGG 0.191136 1_4:-41300237 None:intergenic
GTTTAAACTTCCTCAAATTC+TGG 0.222075 1_4:+41315480 Msa0163300:three_prime_UTR
TTTATTACAGGTATCTTATT+GGG 0.237944 1_4:+41307508 Msa0163300:intron
ATTTATTACAGGTATCTTAT+TGG 0.238493 1_4:+41307507 Msa0163300:intron
AGAGAATTTCTTGTACATTT+TGG 0.238907 1_4:+41306359 Msa0163300:CDS
TGGGTCACTGCTTCTGCATT+TGG 0.242483 1_4:-41307767 None:intergenic
TCTGCATTTGGAGGACCTTC+TGG 0.248549 1_4:-41307755 None:intergenic
GGTTCCTGGTTCCCGATATT+TGG 0.265711 1_4:+41314935 Msa0163300:three_prime_UTR
TTCACTTGCAGCATATAATA+AGG 0.269650 1_4:-41305218 None:intergenic
GAAGGATTTCATTGGGTTCT+TGG 0.270749 1_4:-41312485 None:intergenic
GGAGCATCGGGTGGGGTTCC+TGG 0.280362 1_4:+41314921 Msa0163300:three_prime_UTR
TTTGGATTCTTTATTGCTTT+AGG 0.283500 1_4:+41307142 Msa0163300:CDS
TTGGAAAATCTCGTGGATTC+TGG 0.286568 1_4:+41310981 Msa0163300:CDS
ATCCACGTGATGACGATTTA+TGG 0.292434 1_4:-41302921 None:intergenic
TGTGACTGTTTGAGACCTTA+TGG 0.296403 1_4:+41315298 Msa0163300:three_prime_UTR
AAGTGCTTTCTTCTCCTTCT+CGG 0.302471 1_4:-41313453 None:intergenic
CTGACTGATAGGCACTTCTT+TGG 0.308188 1_4:-41312554 None:intergenic
GGTCAATTCATCACCTATTA+AGG 0.311339 1_4:-41313432 None:intergenic
CAACTCCTCTCTAAGAAATA+TGG 0.312711 1_4:-41314834 Msa0163310:CDS
GGTTCCGGGTCGGGCTTTCT+GGG 0.326767 1_4:-41311025 None:intergenic
AAGACAAATCATGTTGTATA+AGG 0.329353 1_4:-41302639 None:intergenic
TTGCCTACTATTTAGTAAAT+GGG 0.337487 1_4:+41302597 Msa0163300:CDS
TTTGTTAGCTATACATAAAT+CGG 0.341761 1_4:-41314737 None:intergenic
TAAGAAAGAAGCTGAATTCC+TGG 0.342804 1_4:+41309624 Msa0163300:CDS
TTTGAACATCACATATCTTT+CGG 0.342805 1_4:-41314982 Msa0163310:CDS
TCCATGAGCACTGAGATAAC+TGG 0.352935 1_4:+41306260 Msa0163300:CDS
CTGAAGTGTACGAATGGTTT+TGG 0.355223 1_4:+41305918 Msa0163300:CDS
CTCAAAGCGAAGGATTTCAT+TGG 0.379425 1_4:-41312493 None:intergenic
AGAAATAAGTTGTTTCCATA+AGG 0.380873 1_4:-41315313 Msa0163310:intron
GGGTCGGGCTTTCTGGGTAT+AGG 0.385827 1_4:-41311019 None:intergenic
TCAAGCTTATAATTCTATAA+AGG 0.386303 1_4:+41306322 Msa0163300:CDS
TTGGTCAAAAGGACCTTAAT+AGG 0.388491 1_4:+41313419 Msa0163300:CDS
ATACAATTGATATGAACTAA+TGG 0.391551 1_4:-41307562 None:intergenic
ACAAAACTTAACATTCTTCC+TGG 0.391665 1_4:+41314755 Msa0163300:three_prime_UTR
TGGTCCACAACCCCTACATT+TGG 0.398293 1_4:-41312465 None:intergenic
GGTCAGATGATTGTATATAT+AGG 0.399367 1_4:+41307351 Msa0163300:CDS
TGAGCATCCACATCAGGTTC+CGG 0.399986 1_4:-41311040 None:intergenic
TGTTAGGCACAACAAGTTGA+TGG 0.400862 1_4:+41307974 Msa0163300:intron
ATGGTCACCCTTCCAAATAT+CGG 0.405249 1_4:-41314947 Msa0163310:CDS
AAGTACACGAACATTTCTTT+TGG 0.405597 1_4:+41307168 Msa0163300:CDS
TTTGTGATGCTGGTGATTCC+CGG 0.407876 1_4:-41307710 None:intergenic
TCCACATCAGGTTCCGGGTC+GGG 0.407937 1_4:-41311034 None:intergenic
CTGCCTCGGGTTTGGTCAAA+AGG 0.408786 1_4:+41313408 Msa0163300:CDS
TGAGATAACTGGTAGTTTGA+TGG 0.414550 1_4:+41306271 Msa0163300:CDS
GTCACTGCTTCTGCATTTGG+AGG 0.415112 1_4:-41307764 None:intergenic
AACTGAAGCCATGTCAGTTA+AGG 0.424587 1_4:-41313483 None:intergenic
CATGTGTCAAGCTCTAGTTC+TGG 0.429376 1_4:+41309550 Msa0163300:CDS
TATTGATGTTGGTGCTGCCT+CGG 0.429403 1_4:+41313394 Msa0163300:CDS
TTCGTACACTTCAGGCTGTT+TGG 0.429694 1_4:-41305909 None:intergenic
CTGGTGATTCCCGGATAAAA+AGG 0.430228 1_4:-41307701 None:intergenic
CACCGGTTGGTGAGGAGGAC+AGG 0.430373 1_4:+41310772 Msa0163300:CDS
TTTGAAAGGATGACTAAAAT+GGG 0.431093 1_4:+41315190 Msa0163300:three_prime_UTR
TTTGACAAACTAAAAGAAAC+GGG 0.431505 1_4:+41313123 Msa0163300:CDS
ATGCCTTCACCCATGCGGTT+TGG 0.433558 1_4:-41302975 None:intergenic
TGTTGGTGCTGCCTCGGGTT+TGG 0.433951 1_4:+41313400 Msa0163300:CDS
AGCTGATGGAACTTGAGAAA+AGG 0.434158 1_4:+41312529 Msa0163300:CDS
AACCCCACCCGATGCTCCTC+AGG 0.434501 1_4:-41314916 Msa0163310:CDS
TTCACACAGGTTACTGCCGT+TGG 0.436149 1_4:+41314426 Msa0163300:intron
CATATTTCTTAGAGAGGAGT+TGG 0.437810 1_4:+41314835 Msa0163300:three_prime_UTR
GAGCATCCACATCAGGTTCC+GGG 0.438761 1_4:-41311039 None:intergenic
ATGGATGAAGTTAAATGATC+AGG 0.441279 1_4:+41314707 Msa0163300:exon
AAATCTTCAATTGGATCATC+GGG 0.443539 1_4:-41307208 None:intergenic
CTAGTTGTACTGCTAGGATT+TGG 0.445623 1_4:+41307330 Msa0163300:CDS
ATTGATGTTGGTGCTGCCTC+GGG 0.446845 1_4:+41313395 Msa0163300:CDS
CAACCTTTCTGGTGCATAAG+TGG 0.447890 1_4:-41314612 None:intergenic
GAGAAATGGATTTACCTTAA+CGG 0.448654 1_4:-41300251 None:intergenic
CAAAACCATTCGTACACTTC+AGG 0.449478 1_4:-41305917 None:intergenic
TCCTTTGTTAATAAGTTTGA+AGG 0.449982 1_4:+41305968 Msa0163300:CDS
TCACATATCTTTCGGAATTG+AGG 0.454039 1_4:-41314974 Msa0163310:CDS
AAGAGCAAACAGCAAATGCT+TGG 0.455991 1_4:-41307787 None:intergenic
GAAATCTTCAATTGGATCAT+CGG 0.456727 1_4:-41307209 None:intergenic
CACTTATGCACCAGAAAGGT+TGG 0.457686 1_4:+41314613 Msa0163300:CDS
TTCTATCTCTGCTATCATCT+CGG 0.457753 1_4:-41305249 None:intergenic
CAACTTCTTGCTATTGATGT+TGG 0.459877 1_4:+41313383 Msa0163300:CDS
TGTAGATTCAGATGATGAAA+TGG 0.461113 1_4:+41314688 Msa0163300:CDS
ATCCAATTGAAGATTTCATC+AGG 0.465735 1_4:+41307215 Msa0163300:CDS
GCTAAGGCTATCTGCTCCCT+TGG 0.466582 1_4:+41305859 Msa0163300:CDS
GAAAGCAGCCTGTTCTGACT+TGG 0.466824 1_4:+41309585 Msa0163300:CDS
TCACACAGGTTACTGCCGTT+GGG 0.466862 1_4:+41314427 Msa0163300:intron
ATTCGAAAGGCAGCAATTTG+AGG 0.467776 1_4:-41302536 None:intergenic
ACCAGTTATCTCAGTGCTCA+TGG 0.469402 1_4:-41306261 None:intergenic
CCATTTGCTACCTCTGATGA+TGG 0.469525 1_4:+41302742 Msa0163300:CDS
GTTAATAAGTTTGAAGGGGA+CGG 0.473421 1_4:+41305974 Msa0163300:CDS
ACAAAGGACGTCACTACAGC+TGG 0.474919 1_4:-41305953 None:intergenic
AACCTGTCCTCCTCACCAAC+CGG 0.476504 1_4:-41310774 None:intergenic
GGTTCAGAAGCAGCTGCAGC+AGG 0.477118 1_4:+41306451 Msa0163300:CDS
CTTTCGGAATTGAGGAAAGA+TGG 0.477482 1_4:-41314966 Msa0163310:CDS
ATAAGTTCATTCCACATGTC+TGG 0.477627 1_4:+41314864 Msa0163300:three_prime_UTR
TCAAAGCGAAGGATTTCATT+GGG 0.478454 1_4:-41312492 None:intergenic
CTACAATCCTGAGGAGCATC+GGG 0.479635 1_4:+41314909 Msa0163300:three_prime_UTR
AACAGCCTGCACCAAATGTA+GGG 0.479756 1_4:+41312454 Msa0163300:CDS
ATTCCACATGTCTGGCACTC+CGG 0.480121 1_4:+41314872 Msa0163300:three_prime_UTR
TACCTGATGAAATCTTCAAT+TGG 0.481210 1_4:-41307217 None:intergenic
GATATAAATACGTTGTAATA+CGG 0.481799 1_4:+41315050 Msa0163300:three_prime_UTR
AATCGTCATCACGTGGATCC+TGG 0.482075 1_4:+41302926 Msa0163300:CDS
TTCCACATGTCTGGCACTCC+GGG 0.482895 1_4:+41314873 Msa0163300:three_prime_UTR
CCATCATCAGAGGTAGCAAA+TGG 0.483136 1_4:-41302742 None:intergenic
ATTGCTGCAATTGCTAAACT+TGG 0.487614 1_4:+41306206 Msa0163300:CDS
GTTGTAAAAGAGATGCAATA+TGG 0.488049 1_4:-41315023 Msa0163310:CDS
TCTATCTCTGCTATCATCTC+GGG 0.488428 1_4:-41305248 None:intergenic
TGCACCAAATGTAGGGGTTG+TGG 0.488543 1_4:+41312461 Msa0163300:CDS
AAGAGATGCAATATGGAAGC+TGG 0.489238 1_4:-41315016 Msa0163310:CDS
TAAATGGGGCAGTTCAAGAA+AGG 0.492643 1_4:+41302612 Msa0163300:CDS
TGCAATTGCTAAACTTGGCC+CGG 0.494454 1_4:+41306211 Msa0163300:CDS
CCTGGTTCCCGATATTTGGA+AGG 0.494657 1_4:+41314939 Msa0163300:three_prime_UTR
GCTGATGGAACTTGAGAAAA+GGG 0.494748 1_4:+41312530 Msa0163300:CDS
TGGTCACCCTTCCAAATATC+GGG 0.496935 1_4:-41314946 Msa0163310:CDS
AGAAAATAGTGAAATAGAGA+AGG 0.497391 1_4:-41300116 None:intergenic
ATCATCTGAATCTACATCAC+TGG 0.500007 1_4:-41314681 None:intergenic
TAAAGGTGGACAGGAGCAAA+AGG 0.500329 1_4:+41310829 Msa0163300:CDS
TCGAATGGTTCCTCTAGTGT+AGG 0.500669 1_4:+41302553 Msa0163300:CDS
TAGTTTGTGAAGAGCTGGAT+TGG 0.501881 1_4:+41307675 Msa0163300:CDS
AAGCTTTATATGATGCAGCC+AGG 0.502582 1_4:+41302875 Msa0163300:CDS
ATGGAGTGCATGGATGAACT+TGG 0.503782 1_4:+41307993 Msa0163300:CDS
TGCCCCATTTACTAAATAGT+AGG 0.504706 1_4:-41302600 None:intergenic
AGGAGGACAGGTTTATGAAA+GGG 0.505159 1_4:+41310784 Msa0163300:CDS
TTAATAAGTTTGAAGGGGAC+GGG 0.506571 1_4:+41305975 Msa0163300:CDS
TTGTCTTTGAGCAGTGGTCA+AGG 0.509178 1_4:+41302655 Msa0163300:CDS
CATACATGAGCATCCACATC+AGG 0.511008 1_4:-41311046 None:intergenic
CTCCTCAGGATTGTAGCCAC+TGG 0.511858 1_4:-41314902 Msa0163310:CDS
GCTGCAGCAGGCTATTGATA+AGG 0.512317 1_4:+41306463 Msa0163300:CDS
TTCATATCAATTGTATGTTG+AGG 0.514605 1_4:+41307569 Msa0163300:CDS
CTCCTCACCAACCGGTGTGA+TGG 0.515931 1_4:-41310766 None:intergenic
CGTTGGGCATGCAGCAATGT+TGG 0.517058 1_4:+41314443 Msa0163300:CDS
TTAGCACTGGCGTCAGCTTG+TGG 0.517278 1_4:-41302784 None:intergenic
CGAATGGTTCCTCTAGTGTA+GGG 0.518510 1_4:+41302554 Msa0163300:CDS
GCACGTTATAACGGTGATGC+TGG 0.519488 1_4:+41313048 Msa0163300:CDS
TCAAATTGCTGCCTTTCGAA+TGG 0.520137 1_4:+41302538 Msa0163300:CDS
AGTCTGTACAGTGAAATTGC+AGG 0.520302 1_4:-41315151 Msa0163310:intron
GAACAGCCTGCACCAAATGT+AGG 0.520502 1_4:+41312453 Msa0163300:CDS
TGCATTGGTCCAGTTTGCTA+AGG 0.521404 1_4:+41305843 Msa0163300:intron
CATCCACTTATGCACCAGAA+AGG 0.521547 1_4:+41314609 Msa0163300:CDS
TTTCTTCTTCAACCGTTACA+TGG 0.521548 1_4:+41300196 Msa0163300:exon
ATATTTCTTAGAGAGGAGTT+GGG 0.521772 1_4:+41314836 Msa0163300:three_prime_UTR
GCTACAATCCTGAGGAGCAT+CGG 0.523452 1_4:+41314908 Msa0163300:three_prime_UTR
CTATTGATAAGGAGAAAATA+TGG 0.523593 1_4:+41306474 Msa0163300:CDS
TTATTACAGGTATCTTATTG+GGG 0.523663 1_4:+41307509 Msa0163300:intron
TTCTCTGATTAAGCTCTCCA+AGG 0.529124 1_4:-41305876 None:intergenic
GGTGAAGGCATTGTCATGTC+AGG 0.529130 1_4:+41302987 Msa0163300:CDS
ATGTCAATGTATTTGTTCAA+AGG 0.529604 1_4:+41305272 Msa0163300:CDS
TGTAGCCACTGGTGTTTACC+CGG 0.530101 1_4:-41314891 Msa0163310:CDS
ATGACAATGTAAAGGTGGAC+AGG 0.530740 1_4:+41310820 Msa0163300:CDS
TTGCTCGGAAAGATGCCTCC+AGG 0.532885 1_4:-41309642 None:intergenic
AACTAATGGATGAGAGTTGT+GGG 0.533106 1_4:-41307548 None:intergenic
ATAGGTAGTTTGTGAAGAGC+TGG 0.533672 1_4:+41307670 Msa0163300:intron
ATGGCTTCAGTTGTTCCTAT+CGG 0.533849 1_4:+41313494 Msa0163300:CDS
CAATGCATGTAAGTGCAAGC+AGG 0.534320 1_4:-41306187 None:intergenic
TAGTGAAATAGAGAAGGAAG+AGG 0.535907 1_4:-41300110 None:intergenic
AGACAAATTGGAAAATCTCG+TGG 0.536140 1_4:+41310974 Msa0163300:intron
TATAATTCTATAAAGGATGT+TGG 0.536506 1_4:+41306329 Msa0163300:CDS
AGGAATGGCACATGGAATGA+AGG 0.537052 1_4:-41315131 Msa0163310:CDS
AGAGCAAACAGCAAATGCTT+GGG 0.537493 1_4:-41307786 None:intergenic
CCTTTGTTAATAAGTTTGAA+GGG 0.539411 1_4:+41305969 Msa0163300:CDS
AGCATCACAAAACAGTCTCA+TGG 0.542742 1_4:+41307722 Msa0163300:CDS
GCCCGACCCGGAACCTGATG+TGG 0.543249 1_4:+41311033 Msa0163300:CDS
CAGAAAGAATGACAATGTAA+AGG 0.547359 1_4:+41310812 Msa0163300:CDS
ATCCACATCAGGTTCCGGGT+CGG 0.548048 1_4:-41311035 None:intergenic
GCTTCTAAGAAATGAGCTGA+TGG 0.549207 1_4:+41312515 Msa0163300:CDS
AGACCAAACCGCATGGGTGA+AGG 0.550828 1_4:+41302972 Msa0163300:CDS
TTGGGGTAGACCAAACCGCA+TGG 0.552422 1_4:+41302965 Msa0163300:CDS
CAACATTGCTGCATGCCCAA+CGG 0.554350 1_4:-41314442 None:intergenic
GTACAGTGAAATTGCAGGAA+TGG 0.556759 1_4:-41315146 Msa0163310:intron
CATGATTTGTCTTTGAGCAG+TGG 0.558900 1_4:+41302649 Msa0163300:CDS
GATGATGGTGCACGTTATAA+CGG 0.560219 1_4:+41313039 Msa0163300:CDS
AAGCCAAGCTGTTGAAAACC+AGG 0.562530 1_4:-41302944 None:intergenic
TTCTTAGAAGCTCAAAGCGA+AGG 0.563042 1_4:-41312503 None:intergenic
CCTTCCAAATATCGGGAACC+AGG 0.563273 1_4:-41314939 Msa0163310:CDS
GAGGAGGACAGGTTTATGAA+AGG 0.563646 1_4:+41310783 Msa0163300:CDS
CCTGTGCTAGTTGTACTGCT+AGG 0.564051 1_4:+41307324 Msa0163300:CDS
CTGGTTCCCGATATTTGGAA+GGG 0.564236 1_4:+41314940 Msa0163300:three_prime_UTR
CTTTCTGGTGCATAAGTGGA+TGG 0.565207 1_4:-41314608 None:intergenic
TCAGAGATATGTACCATCCC+TGG 0.565736 1_4:+41314473 Msa0163300:CDS
CGTTGAGTGGGGTTCAGAAG+AGG 0.568636 1_4:+41306409 Msa0163300:CDS
GGTATGCAATCCAGAATTTG+AGG 0.569387 1_4:-41315490 Msa0163310:intron
ATCCTGAGGAGCATCGGGTG+GGG 0.569446 1_4:+41314914 Msa0163300:three_prime_UTR
ATGCCAAGAAAATAGTTGAC+GGG 0.570230 1_4:+41309200 Msa0163300:CDS
ACAACCCCTACATTTGGTGC+AGG 0.572458 1_4:-41312459 None:intergenic
CCTAGCAGTACAACTAGCAC+AGG 0.574502 1_4:-41307324 None:intergenic
CATCACACCGGTTGGTGAGG+AGG 0.575965 1_4:+41310767 Msa0163300:CDS
TGATGCCATATTTCTTAGAG+AGG 0.576119 1_4:+41314829 Msa0163300:three_prime_UTR
GAGATTTAACTGCCATGTAA+CGG 0.576520 1_4:-41300208 None:intergenic
TGGTAGTTTGATGGACATGC+TGG 0.577164 1_4:+41306280 Msa0163300:CDS
AACCATCACACCGGTTGGTG+AGG 0.578656 1_4:+41310764 Msa0163300:CDS
CCCTTCAAACTTATTAACAA+AGG 0.580260 1_4:-41305969 None:intergenic
CATAATGTTTATACCAGGGA+TGG 0.584245 1_4:-41314486 None:intergenic
AATAAACAGGATGTCTTGCA+AGG 0.585428 1_4:+41313356 Msa0163300:intron
AAAAGCTGATTCTCTGCAAG+AGG 0.585912 1_4:+41309663 Msa0163300:CDS
GCATCACAAAACAGTCTCAT+GGG 0.587479 1_4:+41307723 Msa0163300:CDS
ATGATGGTATGACTGTCAAC+GGG 0.587846 1_4:+41302758 Msa0163300:CDS
GGATGGTACATATCTCTGAA+TGG 0.588023 1_4:-41314469 None:intergenic
CAACAAGTTGATGGAGTGCA+TGG 0.588754 1_4:+41307983 Msa0163300:CDS
TCAATGTATTTGTTCAAAGG+AGG 0.593230 1_4:+41305275 Msa0163300:CDS
TCTCTGATTAAGCTCTCCAA+GGG 0.594955 1_4:-41305875 None:intergenic
CAATCCTGAGGAGCATCGGG+TGG 0.595880 1_4:+41314912 Msa0163300:three_prime_UTR
TGGGGTAGACCAAACCGCAT+GGG 0.599216 1_4:+41302966 Msa0163300:CDS
AAAGAATGACAATGTAAAGG+TGG 0.599299 1_4:+41310815 Msa0163300:CDS
AATCCTGAGGAGCATCGGGT+GGG 0.600124 1_4:+41314913 Msa0163300:three_prime_UTR
GATGCCAAGAAAATAGTTGA+CGG 0.600651 1_4:+41309199 Msa0163300:CDS
AGTTTGATGGACATGCTGGT+TGG 0.601484 1_4:+41306284 Msa0163300:CDS
CAGCTGAATTTCTGTCCAGA+GGG 0.602473 1_4:+41307870 Msa0163300:CDS
AAAGAAAACATACAAAGCAA+TGG 0.602552 1_4:-41306011 None:intergenic
AGCTTTATATGATGCAGCCA+GGG 0.604106 1_4:+41302876 Msa0163300:CDS
TGCCTACTATTTAGTAAATG+GGG 0.604581 1_4:+41302598 Msa0163300:CDS
AAAATTGAGCTAAAGTCATG+TGG 0.605806 1_4:-41315455 Msa0163310:intron
CTTTGTTAATAAGTTTGAAG+GGG 0.606418 1_4:+41305970 Msa0163300:CDS
GCTTTATTAAATACAGCACA+TGG 0.606466 1_4:+41307822 Msa0163300:CDS
TAAAAGAACCTTAACTGACA+TGG 0.607581 1_4:+41313475 Msa0163300:CDS
GAACTAATGGATGAGAGTTG+TGG 0.607614 1_4:-41307549 None:intergenic
GAAATTGCAGGAATGGCACA+TGG 0.608323 1_4:-41315139 Msa0163310:intron
GTCAAGCTCTAGTTCTGGAA+AGG 0.610770 1_4:+41309555 Msa0163300:CDS
CAGAAAGGTTGGATCTCTTG+AGG 0.611545 1_4:+41314624 Msa0163300:CDS
AAATGGGGCAGTTCAAGAAA+GGG 0.611700 1_4:+41302613 Msa0163300:CDS
AGAAGCATTAAAATGCCGAT+AGG 0.614251 1_4:-41313509 None:intergenic
CAGTCAACGATAAAAGACTC+AGG 0.618660 1_4:+41309238 Msa0163300:CDS
GCTCTAAAAGCTGCAGCTCG+AGG 0.619043 1_4:-41306383 None:intergenic
AACAGCCTGAAGTGTACGAA+TGG 0.620134 1_4:+41305912 Msa0163300:CDS
TCGGGCTTTCTGGGTATAGG+AGG 0.620870 1_4:-41311016 None:intergenic
TACCCGGAGTGCCAGACATG+TGG 0.622470 1_4:-41314875 Msa0163310:CDS
GATCAAACCATCACACCGGT+TGG 0.625270 1_4:+41310759 Msa0163300:CDS
AGGTGATGAATTGACCGAGA+AGG 0.628090 1_4:+41313439 Msa0163300:CDS
GACAACATCTGAAAGCATTG+AGG 0.629336 1_4:+41306505 Msa0163300:CDS
TATACCCAGAAAGCCCGACC+CGG 0.629720 1_4:+41311021 Msa0163300:CDS
GATTTGATGATCAGTGATGA+TGG 0.631118 1_4:+41313024 Msa0163300:CDS
GACCATAAATCGTCATCACG+TGG 0.631638 1_4:+41302919 Msa0163300:CDS
GACAGTCATACCATCATCAG+AGG 0.633736 1_4:-41302752 None:intergenic
CACTAGAGGAACCATTCGAA+AGG 0.635054 1_4:-41302549 None:intergenic
TTTAGAGCAAACGTTGAGTG+GGG 0.635179 1_4:+41306398 Msa0163300:CDS
AGCATATAATAAGGAGTACA+CGG 0.636227 1_4:-41305209 None:intergenic
TGATGCTGGAGGTGTTCAGA+TGG 0.637713 1_4:+41313062 Msa0163300:CDS
TTAATGCAGAGATAAGACAT+TGG 0.637829 1_4:+41309171 Msa0163300:intron
CTATCAGTCAGAAAATAATG+AGG 0.638672 1_4:+41312566 Msa0163300:CDS
GCAGCTGAATTTCTGTCCAG+AGG 0.641446 1_4:+41307869 Msa0163300:CDS
TAGTGTAGGGAGAAAAGTGT+CGG 0.645116 1_4:+41302567 Msa0163300:CDS
GATGATGGTATGACTGTCAA+CGG 0.647798 1_4:+41302757 Msa0163300:CDS
GCACTCCGGGTAAACACCAG+TGG 0.663248 1_4:+41314886 Msa0163300:three_prime_UTR
TGGAGTGCATGGATGAACTT+GGG 0.666848 1_4:+41307994 Msa0163300:CDS
TATTACAGGTATCTTATTGG+GGG 0.669200 1_4:+41307510 Msa0163300:intron
TAGAGAAGGAAGAGGTTGCG+TGG 0.670245 1_4:-41300102 None:intergenic
CATGGGCATAGTAAACCAGA+AGG 0.671641 1_4:+41307740 Msa0163300:CDS
GGATGTGTAAATTTGATGCG+AGG 0.674507 1_4:+41315211 Msa0163300:three_prime_UTR
AATGGCACATGGAATGAAGG+AGG 0.677257 1_4:-41315128 Msa0163310:CDS
AGGAAACTGTGACAAAGACA+AGG 0.691950 1_4:-41315108 Msa0163310:CDS
TGACAATGCCTTCACCCATG+CGG 0.692935 1_4:-41302980 None:intergenic
CACCAGTGGCTACAATCCTG+AGG 0.695000 1_4:+41314900 Msa0163300:three_prime_UTR
CGTTATAACGGTGATGCTGG+AGG 0.697106 1_4:+41313051 Msa0163300:CDS
CAAACTAAAAGAAACGGGAA+CGG 0.697326 1_4:+41313128 Msa0163300:CDS
GATGTGTAAATTTGATGCGA+GGG 0.703262 1_4:+41315212 Msa0163300:three_prime_UTR
ACAGCCTGCACCAAATGTAG+GGG 0.706149 1_4:+41312455 Msa0163300:CDS
ATGTGTAAATTTGATGCGAG+GGG 0.713225 1_4:+41315213 Msa0163300:three_prime_UTR
TAGTGATCAAACCATCACAC+CGG 0.716684 1_4:+41310755 Msa0163300:CDS
GAAAGAAGCTGAATTCCTGG+AGG 0.720772 1_4:+41309627 Msa0163300:CDS
ATATAATAAGGAGTACACGG+CGG 0.819367 1_4:-41305206 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAAAAATAAATAAAAA+AGG - chr1_4:41309413-41309432 None:intergenic 0.0%
!! ATTCAAAAATACTATATTTA+TGG + chr1_4:41301085-41301104 Msa0163300:intron 10.0%
!! AATTTATAATACAATACTTA+CGG - chr1_4:41301580-41301599 None:intergenic 10.0%
!!! TTTTGTGAAAATAAAAATAT+AGG + chr1_4:41303083-41303102 Msa0163300:intron 10.0%
!!! TTTCAATATTTTAAAATTAC+TGG + chr1_4:41303702-41303721 Msa0163300:intron 10.0%
!!! TATTTGTAGTTTTTTATATT+AGG - chr1_4:41304308-41304327 None:intergenic 10.0%
!! TAGAATTATAATTCTATTAT+TGG - chr1_4:41304355-41304374 None:intergenic 10.0%
!! TTACAAAATATACAAATAAA+TGG - chr1_4:41307064-41307083 None:intergenic 10.0%
!!! TTTCTTATTTATTTTATGTT+AGG + chr1_4:41307958-41307977 Msa0163300:intron 10.0%
!! AAAATAAATAAAAAAGGTTT+GGG - chr1_4:41309407-41309426 None:intergenic 10.0%
!! AAAAATAAATAAAAAAGGTT+TGG - chr1_4:41309408-41309427 None:intergenic 10.0%
!! AAGTAAAAAAAAAATCAATA+AGG - chr1_4:41312639-41312658 None:intergenic 10.0%
!!! TGATTAAAGAAAGTTTTTTT+AGG + chr1_4:41300662-41300681 Msa0163300:intron 15.0%
!!! AATTTGAAATGATAACAAAA+TGG + chr1_4:41300904-41300923 Msa0163300:intron 15.0%
!! TACATTCCTTAATAATATAA+CGG - chr1_4:41301055-41301074 None:intergenic 15.0%
!! TTTATAGTATTCAAATCATA+CGG - chr1_4:41301328-41301347 None:intergenic 15.0%
!! GATTTGAATACTATAAATAT+AGG + chr1_4:41301331-41301350 Msa0163300:intron 15.0%
!! TAATTAGGAATATTTACAAA+AGG - chr1_4:41303626-41303645 None:intergenic 15.0%
!!! TTACTTTTGTTTGTTAAATT+AGG + chr1_4:41303909-41303928 Msa0163300:intron 15.0%
!!! AATAAAATACAGATTTTATC+AGG - chr1_4:41305533-41305552 None:intergenic 15.0%
!! AATATACAAATAAATGGAAA+AGG - chr1_4:41307058-41307077 None:intergenic 15.0%
!!! TTTGTATATTTTGTAACAAA+AGG + chr1_4:41307068-41307087 Msa0163300:intron 15.0%
!! TTTATACGATTATTTATTAC+AGG + chr1_4:41307496-41307515 Msa0163300:intron 15.0%
!! CAATAAAAACTATAAATACA+AGG - chr1_4:41309070-41309089 None:intergenic 15.0%
!!! CTTGTATTTATAGTTTTTAT+TGG + chr1_4:41309068-41309087 Msa0163300:intron 15.0%
!! AAATTTAAAAAGATAATAGG+TGG - chr1_4:41309153-41309172 None:intergenic 15.0%
!!! TTTTATATGAGAAAACAAAT+TGG + chr1_4:41310026-41310045 Msa0163300:intron 15.0%
!!! AATTTTATAAATACAATACG+CGG + chr1_4:41310307-41310326 Msa0163300:intron 15.0%
!! AAAGTAAAAATATACTTGAT+TGG + chr1_4:41311271-41311290 Msa0163300:intron 15.0%
!!! TTGATTTTATTAGGAAATTT+AGG + chr1_4:41311465-41311484 Msa0163300:intron 15.0%
!!! TGATTTTATTAGGAAATTTA+GGG + chr1_4:41311466-41311485 Msa0163300:intron 15.0%
!!! ACAAATTTGTTTATACTTTA+TGG + chr1_4:41311721-41311740 Msa0163300:intron 15.0%
!! TTCCAAAAATAATCAAATAT+CGG + chr1_4:41311761-41311780 Msa0163300:intron 15.0%
!! GATTAATTATCTATTCTAAT+TGG + chr1_4:41312363-41312382 Msa0163300:intron 15.0%
!!! TAAATGGTAATGAATAAAAA+AGG + chr1_4:41312799-41312818 Msa0163300:intron 15.0%
!!! TTTTTTAGTTTTAAAAGACA+TGG - chr1_4:41313237-41313256 None:intergenic 15.0%
!! AAAAATTAAACAAATCAACA+TGG + chr1_4:41313752-41313771 Msa0163300:intron 15.0%
!! ATCATCATTCAAATATTTAT+AGG - chr1_4:41314231-41314250 None:intergenic 15.0%
!! CAAAAAATGGAAATAAAGAA+AGG - chr1_4:41300075-41300094 None:intergenic 20.0%
!!! TTCACGTTTATTTTTAAACT+CGG - chr1_4:41300401-41300420 None:intergenic 20.0%
!!! CAAAAATTAGATTTTCAGTT+AGG - chr1_4:41300514-41300533 None:intergenic 20.0%
!!! AATTGTTTTTACTAGCAATT+GGG - chr1_4:41300836-41300855 None:intergenic 20.0%
!!! AAATTGTTTTTACTAGCAAT+TGG - chr1_4:41300837-41300856 None:intergenic 20.0%
!!! GTTTTACCGTTATATTATTA+AGG + chr1_4:41301046-41301065 Msa0163300:intron 20.0%
!! TTGAAATGATTCTATGATTA+TGG + chr1_4:41301396-41301415 Msa0163300:intron 20.0%
!!! AGCTAATTAGTTTCAAATAA+CGG - chr1_4:41301891-41301910 None:intergenic 20.0%
!! GTTACTATGTAAAACAAAAT+AGG - chr1_4:41302427-41302446 None:intergenic 20.0%
!!! ATTTTTATTTTCACAAAAGC+AGG - chr1_4:41303081-41303100 None:intergenic 20.0%
!! GGTATTATGTATAAAAATCT+CGG - chr1_4:41303310-41303329 None:intergenic 20.0%
!!! ATACAAATACTGTTTCTTTA+TGG + chr1_4:41303438-41303457 Msa0163300:intron 20.0%
!! GTAAATATTCCTAATTAAGT+TGG + chr1_4:41303629-41303648 Msa0163300:intron 20.0%
!!! AGTTTTCAAACAAAAAAAGT+AGG + chr1_4:41303670-41303689 Msa0163300:intron 20.0%
!!! CTTCTTTTAACAAATTTAGA+GGG + chr1_4:41303759-41303778 Msa0163300:intron 20.0%
!!! ATACTAAAGAATTTTTGCTA+TGG + chr1_4:41303795-41303814 Msa0163300:intron 20.0%
!!! TTAGTGTATTGCATATTTTT+AGG + chr1_4:41303879-41303898 Msa0163300:intron 20.0%
!!! TTTGCTAAATTACTTTTCTT+TGG + chr1_4:41303950-41303969 Msa0163300:intron 20.0%
!! ACTTTGGATATTATTACTAT+TGG - chr1_4:41304200-41304219 None:intergenic 20.0%
!!! TTTGTTTCTTTGCTTTATTA+TGG - chr1_4:41304388-41304407 None:intergenic 20.0%
!! TAAAAAAAGCTTCAAAACAA+AGG - chr1_4:41304868-41304887 None:intergenic 20.0%
!! CTTTACAAATCATATTCATT+TGG - chr1_4:41305038-41305057 None:intergenic 20.0%
!! ATTCATTAATGATGAAGAAT+AGG - chr1_4:41305082-41305101 None:intergenic 20.0%
!!! CTTCATCATTAATGAATTTT+TGG + chr1_4:41305085-41305104 Msa0163300:intron 20.0%
!!! ACAGTTTATTAATTTTTCTC+AGG + chr1_4:41305183-41305202 Msa0163300:intron 20.0%
!! AGAATGAAATAGAAATTCTT+CGG + chr1_4:41305351-41305370 Msa0163300:intron 20.0%
!! TAAAACTAAAGATGTAAAGA+AGG - chr1_4:41305770-41305789 None:intergenic 20.0%
!! TCAAGCTTATAATTCTATAA+AGG + chr1_4:41306322-41306341 Msa0163300:CDS 20.0%
!! TATAATTCTATAAAGGATGT+TGG + chr1_4:41306329-41306348 Msa0163300:CDS 20.0%
!! TAAAAAAATTATACAGTCAC+AGG - chr1_4:41306720-41306739 None:intergenic 20.0%
!! TTCTATCATAAACCATATTT+CGG - chr1_4:41306769-41306788 None:intergenic 20.0%
!! TGGTTTATGATAGAATATTA+TGG + chr1_4:41306774-41306793 Msa0163300:intron 20.0%
!!! TTGTATATATAGGTGTTTTA+AGG + chr1_4:41307361-41307380 Msa0163300:CDS 20.0%
!! ATAAATGCACAAAAATTCAT+AGG - chr1_4:41307469-41307488 None:intergenic 20.0%
!! ATTTATTACAGGTATCTTAT+TGG + chr1_4:41307507-41307526 Msa0163300:intron 20.0%
!! TTTATTACAGGTATCTTATT+GGG + chr1_4:41307508-41307527 Msa0163300:intron 20.0%
!! ATACAATTGATATGAACTAA+TGG - chr1_4:41307565-41307584 None:intergenic 20.0%
!!! ATTATTAAGCTGATTTAACT+GGG + chr1_4:41307631-41307650 Msa0163300:intron 20.0%
!!! TAATTTATTAATTTTGCAGC+TGG - chr1_4:41307936-41307955 None:intergenic 20.0%
!!! CATCAAAACATTACATTTTT+GGG + chr1_4:41308111-41308130 Msa0163300:intron 20.0%
!!! ATCAAAACATTACATTTTTG+GGG + chr1_4:41308112-41308131 Msa0163300:intron 20.0%
!! TACAAGGTGTATAAATAAAT+AGG - chr1_4:41309054-41309073 None:intergenic 20.0%
!!! AAATTCAGATTTTAAAGTGT+GGG - chr1_4:41309285-41309304 None:intergenic 20.0%
!!! TAAATTCAGATTTTAAAGTG+TGG - chr1_4:41309286-41309305 None:intergenic 20.0%
!! TGAAGAATATTGATATGTTA+AGG - chr1_4:41309370-41309389 None:intergenic 20.0%
!! TGAAATCAAATGTCAAAAAA+AGG - chr1_4:41309472-41309491 None:intergenic 20.0%
!!! TTTTTTTGACATTTGATTTC+AGG + chr1_4:41309471-41309490 Msa0163300:intron 20.0%
!!! TTTGTTTTCTCATATAAAAG+AGG - chr1_4:41310025-41310044 None:intergenic 20.0%
!! ATAAAATTAAAGTAGCCATT+TGG - chr1_4:41310295-41310314 None:intergenic 20.0%
!!! TTTTTTTCCTTTCAAATTAG+TGG + chr1_4:41310575-41310594 Msa0163300:intron 20.0%
!!! TTTAGGTAAATGTAATTTTC+TGG + chr1_4:41310911-41310930 Msa0163300:intron 20.0%
!! ATGTATTAACATAAGATGTT+TGG + chr1_4:41311161-41311180 Msa0163300:intron 20.0%
!! TGTATTAACATAAGATGTTT+GGG + chr1_4:41311162-41311181 Msa0163300:intron 20.0%
!! TCATATATGTTCTTCAATAA+TGG + chr1_4:41311210-41311229 Msa0163300:intron 20.0%
!! AATTTAGAAATGACTATGAT+TGG - chr1_4:41311245-41311264 None:intergenic 20.0%
!! GAGAAAGTTGAAAAATATTA+GGG - chr1_4:41311512-41311531 None:intergenic 20.0%
!! AGAGAAAGTTGAAAAATATT+AGG - chr1_4:41311513-41311532 None:intergenic 20.0%
!!! ATCTTCTATTTTCTATCTTA+TGG + chr1_4:41311565-41311584 Msa0163300:intron 20.0%
!! TTTATTCATTACCATTTACT+AGG - chr1_4:41312797-41312816 None:intergenic 20.0%
!! TGTTGTAAATAGCATTTATT+AGG - chr1_4:41312889-41312908 None:intergenic 20.0%
!!! TTTTGACAAACTAAAAGAAA+CGG + chr1_4:41313122-41313141 Msa0163300:CDS 20.0%
!! ATTGATAAGAACAATCATAA+AGG - chr1_4:41313551-41313570 None:intergenic 20.0%
!!! ATTTAAAATCTTAAACTGCT+TGG + chr1_4:41314140-41314159 Msa0163300:intron 20.0%
!! AAACATCTTATATTGGAAAA+TGG - chr1_4:41314383-41314402 None:intergenic 20.0%
!! TTGTAAGAAACATCTTATAT+TGG - chr1_4:41314390-41314409 None:intergenic 20.0%
!! TTTGTTAGCTATACATAAAT+CGG - chr1_4:41314740-41314759 None:intergenic 20.0%
!! GATATAAATACGTTGTAATA+CGG + chr1_4:41315050-41315069 Msa0163300:three_prime_UTR 20.0%
!!! TATCCAAATATACTTTTGAA+AGG + chr1_4:41315176-41315195 Msa0163300:three_prime_UTR 20.0%
! AGAAAATAGTGAAATAGAGA+AGG - chr1_4:41300119-41300138 None:intergenic 25.0%
!!! TTATTTTTAAACTCGGTATC+CGG - chr1_4:41300394-41300413 None:intergenic 25.0%
! ATCAATGATATGTATAAGCT+AGG + chr1_4:41300420-41300439 Msa0163300:intron 25.0%
! TTTCTTTAATCATATACTCG+TGG - chr1_4:41300654-41300673 None:intergenic 25.0%
! GAAATATCAAATCAACTTGT+TGG + chr1_4:41300701-41300720 Msa0163300:intron 25.0%
! GAAATGATAACAAAATGGAT+AGG + chr1_4:41300909-41300928 Msa0163300:intron 25.0%
! AATAATATAACGGTAAAACG+CGG - chr1_4:41301045-41301064 None:intergenic 25.0%
!! ATATAGGCAAAATCTTCTTT+TGG + chr1_4:41301347-41301366 Msa0163300:intron 25.0%
!! ATCTAGATTTTATGCATGAT+TGG - chr1_4:41301803-41301822 None:intergenic 25.0%
! GAAATAGTTTGGTTGAAATT+CGG + chr1_4:41301972-41301991 Msa0163300:intron 25.0%
! AAATAGTTTGGTTGAAATTC+GGG + chr1_4:41301973-41301992 Msa0163300:intron 25.0%
!! TGTTTTCAACTTATTTCAAC+AGG + chr1_4:41302171-41302190 Msa0163300:intron 25.0%
! ATGTAAAACAAAATAGGACA+AGG - chr1_4:41302421-41302440 None:intergenic 25.0%
! ATTGCCTACTATTTAGTAAA+TGG + chr1_4:41302596-41302615 Msa0163300:CDS 25.0%
! TTGCCTACTATTTAGTAAAT+GGG + chr1_4:41302597-41302616 Msa0163300:CDS 25.0%
! AAGACAAATCATGTTGTATA+AGG - chr1_4:41302642-41302661 None:intergenic 25.0%
!! ACACTATTTTACGTTTTCTA+AGG + chr1_4:41302696-41302715 Msa0163300:CDS 25.0%
!!! TGCTTTTAAGTTTTAACAGT+TGG - chr1_4:41303403-41303422 None:intergenic 25.0%
!! GCTTCTTTTAACAAATTTAG+AGG + chr1_4:41303758-41303777 Msa0163300:intron 25.0%
!! GTTTGTTAAATTAGGTCATT+TGG + chr1_4:41303917-41303936 Msa0163300:intron 25.0%
! GAAAAGTAATTTAGCAAAGA+AGG - chr1_4:41303948-41303967 None:intergenic 25.0%
! TAGAGAGAATAATAGGTTAA+GGG - chr1_4:41304138-41304157 None:intergenic 25.0%
! TTAGAGAGAATAATAGGTTA+AGG - chr1_4:41304139-41304158 None:intergenic 25.0%
! TAGAAGTTAGAGAGAATAAT+AGG - chr1_4:41304145-41304164 None:intergenic 25.0%
! GTGAAAAAATTATGAGTGAA+GGG + chr1_4:41304430-41304449 Msa0163300:intron 25.0%
!! AGATTTTAGATAGCCAAATA+TGG - chr1_4:41304985-41305004 None:intergenic 25.0%
!! TTTCTTAAATTTTGCAGGTT+AGG - chr1_4:41305154-41305173 None:intergenic 25.0%
!! CAGTTTTTCTTAAATTTTGC+AGG - chr1_4:41305159-41305178 None:intergenic 25.0%
! ATGTCAATGTATTTGTTCAA+AGG + chr1_4:41305272-41305291 Msa0163300:CDS 25.0%
! CTATTATAAAACTTCACACA+GGG - chr1_4:41305381-41305400 None:intergenic 25.0%
! TCTATTATAAAACTTCACAC+AGG - chr1_4:41305382-41305401 None:intergenic 25.0%
! ATTATCTGATGAATAGTTTC+AGG - chr1_4:41305412-41305431 None:intergenic 25.0%
! AAATATATTTCGCATAGCTA+TGG + chr1_4:41305461-41305480 Msa0163300:intron 25.0%
! AAAGTTTAAATCTATGACTC+AGG + chr1_4:41305574-41305593 Msa0163300:intron 25.0%
! CTACAAAACTTCCATATTAA+GGG - chr1_4:41305624-41305643 None:intergenic 25.0%
! TCCTTTGTTAATAAGTTTGA+AGG + chr1_4:41305968-41305987 Msa0163300:CDS 25.0%
! CCTTTGTTAATAAGTTTGAA+GGG + chr1_4:41305969-41305988 Msa0163300:CDS 25.0%
! CTTTGTTAATAAGTTTGAAG+GGG + chr1_4:41305970-41305989 Msa0163300:CDS 25.0%
! AAAGAAAACATACAAAGCAA+TGG - chr1_4:41306014-41306033 None:intergenic 25.0%
! CGTCTATTAATATAACATGA+AGG - chr1_4:41306086-41306105 None:intergenic 25.0%
!! AGAGAATTTCTTGTACATTT+TGG + chr1_4:41306359-41306378 Msa0163300:CDS 25.0%
! CTATTGATAAGGAGAAAATA+TGG + chr1_4:41306474-41306493 Msa0163300:CDS 25.0%
!! AACAAAGTATAGCTTTACTT+TGG - chr1_4:41306644-41306663 None:intergenic 25.0%
! AAAATTCTTATTCATTCACG+TGG + chr1_4:41306681-41306700 Msa0163300:intron 25.0%
!!! TGATTTTTTTTTTTCCAGCA+TGG + chr1_4:41306910-41306929 Msa0163300:intron 25.0%
! TTTGGATTCTTTATTGCTTT+AGG + chr1_4:41307142-41307161 Msa0163300:CDS 25.0%
!! ATTACTATTGTTAGAGTACT+AGG + chr1_4:41307258-41307277 Msa0163300:intron 25.0%
! ACAAGACATTATGATGATAA+AGG - chr1_4:41307439-41307458 None:intergenic 25.0%
! TTATTACAGGTATCTTATTG+GGG + chr1_4:41307509-41307528 Msa0163300:intron 25.0%
! TTCATATCAATTGTATGTTG+AGG + chr1_4:41307569-41307588 Msa0163300:CDS 25.0%
! TATGTTGAGGTTAGTATTTA+TGG + chr1_4:41307582-41307601 Msa0163300:intron 25.0%
!! GATTATTAAGCTGATTTAAC+TGG + chr1_4:41307630-41307649 Msa0163300:intron 25.0%
!! TTATTAAGCTGATTTAACTG+GGG + chr1_4:41307632-41307651 Msa0163300:intron 25.0%
!! GCATCAAAACATTACATTTT+TGG + chr1_4:41308110-41308129 Msa0163300:intron 25.0%
! ACTACAGCCATTATATAAAA+CGG - chr1_4:41308285-41308304 None:intergenic 25.0%
! TAGTTGTTCACAAAAAGAAT+TGG + chr1_4:41308402-41308421 Msa0163300:intron 25.0%
!!! TCTTAATGTGGTTTTAAATG+TGG + chr1_4:41308455-41308474 Msa0163300:intron 25.0%
!!! CTTAATGTGGTTTTAAATGT+GGG + chr1_4:41308456-41308475 Msa0163300:intron 25.0%
! TAAAGAAAGTAAATGACACA+TGG + chr1_4:41308608-41308627 Msa0163300:intron 25.0%
!!! TCTTTCTTTTCTAGAGAATT+GGG - chr1_4:41308901-41308920 None:intergenic 25.0%
!!! TTCTTTCTTTTCTAGAGAAT+TGG - chr1_4:41308902-41308921 None:intergenic 25.0%
! TAAACGCATTTCAATTAGAT+TGG - chr1_4:41308928-41308947 None:intergenic 25.0%
!! AAAAATGTTTTCACAAGATC+TGG - chr1_4:41309098-41309117 None:intergenic 25.0%
! GAAATAATACACTACTGAAA+TGG - chr1_4:41309328-41309347 None:intergenic 25.0%
!!! TATTTTTTTCTTCCTGAAAG+TGG + chr1_4:41309816-41309835 Msa0163300:intron 25.0%
!!! ATTTTTTTCTTCCTGAAAGT+GGG + chr1_4:41309817-41309836 Msa0163300:intron 25.0%
! TTTATCAACAAACACAATTC+AGG - chr1_4:41309878-41309897 None:intergenic 25.0%
!! ATAACCTTAATTGCCATTTA+GGG - chr1_4:41310053-41310072 None:intergenic 25.0%
!! TATAACCTTAATTGCCATTT+AGG - chr1_4:41310054-41310073 None:intergenic 25.0%
! TTGTCTACGAAAGATTAATT+TGG + chr1_4:41310079-41310098 Msa0163300:intron 25.0%
! CTAATTACTAGTACCAAAAT+GGG - chr1_4:41310144-41310163 None:intergenic 25.0%
! TCTAATTACTAGTACCAAAA+TGG - chr1_4:41310145-41310164 None:intergenic 25.0%
! TAATTAGAAACCAAAACGAT+GGG + chr1_4:41310157-41310176 Msa0163300:intron 25.0%
! TACTCTATTACAGGTTATTT+GGG - chr1_4:41310260-41310279 None:intergenic 25.0%
! AATAATCATATGCAGTACTT+TGG + chr1_4:41310365-41310384 Msa0163300:intron 25.0%
! TTTAAGCAAAGACATAAAAC+TGG - chr1_4:41310465-41310484 None:intergenic 25.0%
! TTAAAAGTCTTGGTGAAAAT+TGG + chr1_4:41310480-41310499 Msa0163300:intron 25.0%
! TAAAAGTCTTGGTGAAAATT+GGG + chr1_4:41310481-41310500 Msa0163300:intron 25.0%
!! TTTTCACAAAAGATACGAAA+AGG - chr1_4:41311106-41311125 None:intergenic 25.0%
! GTAAAAATATACTTGATTGG+TGG + chr1_4:41311274-41311293 Msa0163300:intron 25.0%
!!! AGCTGCTATTTGATTTTATT+AGG + chr1_4:41311456-41311475 Msa0163300:intron 25.0%
!! CACCGATATTTGATTATTTT+TGG - chr1_4:41311766-41311785 None:intergenic 25.0%
! GACACAACTAAGATTATATT+TGG + chr1_4:41311869-41311888 Msa0163300:intron 25.0%
!!! ACATGTAGTCACTTTTTTAA+AGG - chr1_4:41311930-41311949 None:intergenic 25.0%
! TCTTTATAGATTCTTGAGAT+AGG - chr1_4:41312090-41312109 None:intergenic 25.0%
!!! TCTTTGAGTTTTGAGTATTA+TGG + chr1_4:41312398-41312417 Msa0163300:intron 25.0%
! CATGACAATATGTAATTATC+AGG - chr1_4:41312840-41312859 None:intergenic 25.0%
! CTGATAATTACATATTGTCA+TGG + chr1_4:41312838-41312857 Msa0163300:intron 25.0%
! TTTGACAAACTAAAAGAAAC+GGG + chr1_4:41313123-41313142 Msa0163300:CDS 25.0%
!!! GTTTTAAAAGACATGGAATA+GGG - chr1_4:41313230-41313249 None:intergenic 25.0%
!!! AGTTTTAAAAGACATGGAAT+AGG - chr1_4:41313231-41313250 None:intergenic 25.0%
! ATAAGGAGCAGAAAAATTAA+AGG - chr1_4:41314268-41314287 None:intergenic 25.0%
! GTTCCACTTCAATATTTATA+AGG - chr1_4:41314285-41314304 None:intergenic 25.0%
! AATATTGAAGTGGAACAAAA+TGG + chr1_4:41314289-41314308 Msa0163300:intron 25.0%
! ATAAGATGTTTCTTACAAGA+AGG + chr1_4:41314392-41314411 Msa0163300:intron 25.0%
! AAGTCATAATGTTTATACCA+GGG - chr1_4:41314493-41314512 None:intergenic 25.0%
! AAAGTCATAATGTTTATACC+AGG - chr1_4:41314494-41314513 None:intergenic 25.0%
! TTTGAACATCACATATCTTT+CGG - chr1_4:41314985-41315004 Msa0163310:CDS 25.0%
!! CATCCTTTCAAAAGTATATT+TGG - chr1_4:41315182-41315201 Msa0163310:intron 25.0%
!!! TTTTGAAAGGATGACTAAAA+TGG + chr1_4:41315189-41315208 Msa0163300:three_prime_UTR 25.0%
! TTTGAAAGGATGACTAAAAT+GGG + chr1_4:41315190-41315209 Msa0163300:three_prime_UTR 25.0%
!! AGAAATAAGTTGTTTCCATA+AGG - chr1_4:41315316-41315335 Msa0163310:intron 25.0%
CCTTAACGGAAGAAAATTAT+TGG - chr1_4:41300240-41300259 None:intergenic 30.0%
! CCAATAATTTTCTTCCGTTA+AGG + chr1_4:41300237-41300256 Msa0163300:CDS 30.0%
! GAGAAATGGATTTACCTTAA+CGG - chr1_4:41300254-41300273 None:intergenic 30.0%
!! TAAGCTAGGTTTACTTTTAC+TGG + chr1_4:41300434-41300453 Msa0163300:intron 30.0%
!!! TTAACACTACCCTTTTTTGT+AGG + chr1_4:41300575-41300594 Msa0163300:intron 30.0%
CCTGAATTACCTACAAAAAA+GGG - chr1_4:41300587-41300606 None:intergenic 30.0%
ACCTGAATTACCTACAAAAA+AGG - chr1_4:41300588-41300607 None:intergenic 30.0%
!!! GAAAGTTTTTTTAGGTCAAG+AGG + chr1_4:41300670-41300689 Msa0163300:intron 30.0%
!! TATCAAATCAACTTGTTGGT+TGG + chr1_4:41300705-41300724 Msa0163300:intron 30.0%
! TATAGGACCTATTTTACTGA+CGG - chr1_4:41300798-41300817 None:intergenic 30.0%
AACTGACGGAGAATTATAAA+TGG - chr1_4:41300868-41300887 None:intergenic 30.0%
ATATCCACTAATTCAACTGA+CGG - chr1_4:41300882-41300901 None:intergenic 30.0%
AAAATGGATAGGTTGTTAGA+TGG + chr1_4:41300920-41300939 Msa0163300:intron 30.0%
TTCTCAATCTAAGAAGAATG+AGG + chr1_4:41300969-41300988 Msa0163300:intron 30.0%
ATAATATAACGGTAAAACGC+GGG - chr1_4:41301044-41301063 None:intergenic 30.0%
! GATTTTATGCATGATTGGTA+AGG - chr1_4:41301798-41301817 None:intergenic 30.0%
CGAAGTTACAAGAAATAGTT+TGG + chr1_4:41301961-41301980 Msa0163300:intron 30.0%
TAAGCATTTATGAGACTGTT+TGG + chr1_4:41302034-41302053 Msa0163300:intron 30.0%
AAGCATTTATGAGACTGTTT+GGG + chr1_4:41302035-41302054 Msa0163300:intron 30.0%
GAGCTTATGAAAATAGCTTA+TGG + chr1_4:41302059-41302078 Msa0163300:intron 30.0%
!! AATAAGTTGATAACAGCCTA+TGG - chr1_4:41302095-41302114 None:intergenic 30.0%
AACTTATTTCCACAAGCTTT+AGG + chr1_4:41302107-41302126 Msa0163300:intron 30.0%
!! CTATTTTTCATAAGCTATCC+TGG - chr1_4:41302277-41302296 None:intergenic 30.0%
CTATAAGTGCTTAGTTAATC+TGG + chr1_4:41302381-41302400 Msa0163300:intron 30.0%
GTTAATCTGGTTATTCAAAC+AGG + chr1_4:41302394-41302413 Msa0163300:intron 30.0%
GTTTCTAATTGCAAGTCATT+TGG + chr1_4:41302508-41302527 Msa0163300:intron 30.0%
TGCCTACTATTTAGTAAATG+GGG + chr1_4:41302598-41302617 Msa0163300:CDS 30.0%
!! CTATTTTACGTTTTCTAAGG+CGG + chr1_4:41302699-41302718 Msa0163300:CDS 30.0%
!!! TATTTTACGTTTTCTAAGGC+GGG + chr1_4:41302700-41302719 Msa0163300:CDS 30.0%
TGCTAACCTTGAAAAAATGA+GGG + chr1_4:41302801-41302820 Msa0163300:CDS 30.0%
!!! ATTTCACCCTCATTTTTTCA+AGG - chr1_4:41302810-41302829 None:intergenic 30.0%
! GAAGATGAAGACTTTTATGA+TGG + chr1_4:41302844-41302863 Msa0163300:CDS 30.0%
!!! TTTTGTTTTACATGCCTTGT+TGG + chr1_4:41303205-41303224 Msa0163300:intron 30.0%
GTTTCTTTATGGTAACTGAA+AGG + chr1_4:41303449-41303468 Msa0163300:intron 30.0%
TTGTTTGAAAACTCTGTATC+TGG - chr1_4:41303663-41303682 None:intergenic 30.0%
AAGCAATAATGTCAATCTGT+TGG - chr1_4:41303742-41303761 None:intergenic 30.0%
AGTTATTAAATGTCCAGCTT+GGG + chr1_4:41303851-41303870 Msa0163300:intron 30.0%
!!! ACTTTTGAGTTTGACAACTT+TGG - chr1_4:41304216-41304235 None:intergenic 30.0%
! TCTTTGCTTTATTATGGAGT+TGG - chr1_4:41304382-41304401 None:intergenic 30.0%
CCAGATAAAAAACAAACCAA+CGG + chr1_4:41304408-41304427 Msa0163300:intron 30.0%
!!! ACTCATAATTTTTTCACCGT+TGG - chr1_4:41304427-41304446 None:intergenic 30.0%
GGTGAAAAAATTATGAGTGA+AGG + chr1_4:41304429-41304448 Msa0163300:intron 30.0%
AAAAATTATGAGTGAAGGGA+AGG + chr1_4:41304434-41304453 Msa0163300:intron 30.0%
CAATAAAAGAACTGTGATAC+TGG + chr1_4:41304511-41304530 Msa0163300:intron 30.0%
ATACTGGTATCTATTTGAGT+GGG + chr1_4:41304527-41304546 Msa0163300:intron 30.0%
GGAAAAATAAACAAAGCAGA+GGG + chr1_4:41304567-41304586 Msa0163300:intron 30.0%
GTTCTCTTCATTTATACTAG+GGG - chr1_4:41304769-41304788 None:intergenic 30.0%
CGTTCTCTTCATTTATACTA+GGG - chr1_4:41304770-41304789 None:intergenic 30.0%
TCGTTCTCTTCATTTATACT+AGG - chr1_4:41304771-41304790 None:intergenic 30.0%
AATAGTGAGATATGATCAAC+TGG - chr1_4:41305130-41305149 None:intergenic 30.0%
! AGCATATAATAAGGAGTACA+CGG - chr1_4:41305212-41305231 None:intergenic 30.0%
TTCACTTGCAGCATATAATA+AGG - chr1_4:41305221-41305240 None:intergenic 30.0%
TCAATGTATTTGTTCAAAGG+AGG + chr1_4:41305275-41305294 Msa0163300:CDS 30.0%
AAATCTATGACTCAGGTTTA+AGG + chr1_4:41305581-41305600 Msa0163300:intron 30.0%
GCTACAAAACTTCCATATTA+AGG - chr1_4:41305625-41305644 None:intergenic 30.0%
!! TAATATGGAAGTTTTGTAGC+AGG + chr1_4:41305625-41305644 Msa0163300:intron 30.0%
TAAGTAAACAATCACTGTGA+TGG - chr1_4:41305675-41305694 None:intergenic 30.0%
AATACGAGCGAATCAAATAT+TGG - chr1_4:41305718-41305737 None:intergenic 30.0%
AACTTGTGTAAATGTTGCAT+TGG + chr1_4:41305828-41305847 Msa0163300:intron 30.0%
CCCTTCAAACTTATTAACAA+AGG - chr1_4:41305972-41305991 None:intergenic 30.0%
!! ATATTTTTGACTGAATTCCC+AGG + chr1_4:41306117-41306136 Msa0163300:intron 30.0%
GAATTATAAGCTTGACTTAC+AGG - chr1_4:41306317-41306336 None:intergenic 30.0%
!! TTCAGAAGAGGTTATTTTCT+GGG + chr1_4:41306421-41306440 Msa0163300:CDS 30.0%
! TAATGAGTTGAACCGAAATA+TGG + chr1_4:41306754-41306773 Msa0163300:intron 30.0%
! GTTGTTGTTGTATTGACATT+TGG + chr1_4:41306853-41306872 Msa0163300:intron 30.0%
AAATCATTTCTATCCCTAGT+GGG - chr1_4:41306896-41306915 None:intergenic 30.0%
AAAATCATTTCTATCCCTAG+TGG - chr1_4:41306897-41306916 None:intergenic 30.0%
!!! TTTTTTTTTTTCCAGCATGG+AGG + chr1_4:41306913-41306932 Msa0163300:intron 30.0%
! AAGTACACGAACATTTCTTT+TGG + chr1_4:41307168-41307187 Msa0163300:CDS 30.0%
AAATCTTCAATTGGATCATC+GGG - chr1_4:41307211-41307230 None:intergenic 30.0%
GAAATCTTCAATTGGATCAT+CGG - chr1_4:41307212-41307231 None:intergenic 30.0%
ATCCAATTGAAGATTTCATC+AGG + chr1_4:41307215-41307234 Msa0163300:CDS 30.0%
TACCTGATGAAATCTTCAAT+TGG - chr1_4:41307220-41307239 None:intergenic 30.0%
!! ACTAGGTGTCTTATTGTTTT+AGG + chr1_4:41307275-41307294 Msa0163300:intron 30.0%
!!! GTCATGAATAGTTTTTGGTT+AGG + chr1_4:41307301-41307320 Msa0163300:intron 30.0%
GGTCAGATGATTGTATATAT+AGG + chr1_4:41307351-41307370 Msa0163300:CDS 30.0%
TATTACAGGTATCTTATTGG+GGG + chr1_4:41307510-41307529 Msa0163300:intron 30.0%
! GCTTTATTAAATACAGCACA+TGG + chr1_4:41307822-41307841 Msa0163300:CDS 30.0%
! TTTATTAATTTTGCAGCTGG+TGG - chr1_4:41307933-41307952 None:intergenic 30.0%
!!! ATGTTTTGATGCATGAATCA+TGG - chr1_4:41308102-41308121 None:intergenic 30.0%
TTGTTCACAAAAAGAATTGG+AGG + chr1_4:41308405-41308424 Msa0163300:intron 30.0%
TAGAAGCTAAAGTAAAGTTG+AGG - chr1_4:41308487-41308506 None:intergenic 30.0%
! TTATCCTACAAATGCTCTTT+TGG + chr1_4:41308555-41308574 Msa0163300:intron 30.0%
TTCTTTCTACGGAATAATCA+CGG + chr1_4:41308585-41308604 Msa0163300:intron 30.0%
!! AAGATGGATTGAAGACAAAA+TGG + chr1_4:41308642-41308661 Msa0163300:intron 30.0%
! AACTTAGAGGTTGATCAAAA+CGG + chr1_4:41308798-41308817 Msa0163300:intron 30.0%
TGATTGGAATTAGAAACTCT+TGG - chr1_4:41309125-41309144 None:intergenic 30.0%
TTAATGCAGAGATAAGACAT+TGG + chr1_4:41309171-41309190 Msa0163300:intron 30.0%
!! TTTTATCGTTGACTGAATTG+TGG - chr1_4:41309233-41309252 None:intergenic 30.0%
!!! TATTTTTTCCAAGTCAGAAC+AGG - chr1_4:41309596-41309615 None:intergenic 30.0%
!! GTTCTGACTTGGAAAAAATA+CGG + chr1_4:41309596-41309615 Msa0163300:CDS 30.0%
ATTATACCAGGAATTGGTAA+AGG - chr1_4:41309723-41309742 None:intergenic 30.0%
AGAAGACATCAACATAAAGA+AGG - chr1_4:41309797-41309816 None:intergenic 30.0%
ATTGACTGATCAACATAACA+GGG + chr1_4:41309903-41309922 Msa0163300:intron 30.0%
AACCAGATAATAATCAGTGA+TGG + chr1_4:41309930-41309949 Msa0163300:intron 30.0%
ACCAGATAATAATCAGTGAT+GGG + chr1_4:41309931-41309950 Msa0163300:intron 30.0%
! TAACCTTAATTGCCATTTAG+GGG - chr1_4:41310052-41310071 None:intergenic 30.0%
! TCTACGAAAGATTAATTTGG+TGG + chr1_4:41310082-41310101 Msa0163300:intron 30.0%
GTAATTAGAAACCAAAACGA+TGG + chr1_4:41310156-41310175 Msa0163300:intron 30.0%
! ATGGGAAGTATATGTTTGAA+AGG + chr1_4:41310175-41310194 Msa0163300:intron 30.0%
CTACTCTATTACAGGTTATT+TGG - chr1_4:41310261-41310280 None:intergenic 30.0%
TTTATAAATACAATACGCGG+TGG + chr1_4:41310310-41310329 Msa0163300:intron 30.0%
TATTCTTCACATACATACTC+TGG - chr1_4:41310349-41310368 None:intergenic 30.0%
!! GTACTTTGGAGTAAAATATG+AGG + chr1_4:41310379-41310398 Msa0163300:intron 30.0%
TGGAGTAAAATATGAGGATT+AGG + chr1_4:41310385-41310404 Msa0163300:intron 30.0%
AAGAAGGCAAAATCTATGTT+CGG - chr1_4:41310439-41310458 None:intergenic 30.0%
ATGTCTTTGCTTAAAAGTCT+TGG + chr1_4:41310470-41310489 Msa0163300:intron 30.0%
TACAAGTTTAGTAGTATGCA+TGG + chr1_4:41310504-41310523 Msa0163300:intron 30.0%
!!! TTGTTGTTTGCTTTTTTCCA+TGG + chr1_4:41310530-41310549 Msa0163300:intron 30.0%
CATTACTCCACTAATTTGAA+AGG - chr1_4:41310585-41310604 None:intergenic 30.0%
CAGAAAGAATGACAATGTAA+AGG + chr1_4:41310812-41310831 Msa0163300:CDS 30.0%
AAAGAATGACAATGTAAAGG+TGG + chr1_4:41310815-41310834 Msa0163300:CDS 30.0%
AAACAGAAGAAAGTAGTAGT+TGG - chr1_4:41310893-41310912 None:intergenic 30.0%
! CTACTACTTTCTTCTGTTTT+AGG + chr1_4:41310894-41310913 Msa0163300:intron 30.0%
!!! TGTGTCTTTTTCAGACAAAT+TGG + chr1_4:41310962-41310981 Msa0163300:intron 30.0%
!! AGGAAATTTAGGGTATTTTG+AGG + chr1_4:41311476-41311495 Msa0163300:intron 30.0%
!!! TGTTCCTGTCTTTTGTTTTT+TGG + chr1_4:41311614-41311633 Msa0163300:intron 30.0%
AACACCAAAAAACAAAAGAC+AGG - chr1_4:41311621-41311640 None:intergenic 30.0%
TATACCAGTATGACAAATAG+CGG - chr1_4:41311790-41311809 None:intergenic 30.0%
!! TTGGTTTTCAGTATAGTTGT+AGG + chr1_4:41311888-41311907 Msa0163300:intron 30.0%
!!! GAGAAACATTTTTTCGTTAG+TGG + chr1_4:41311966-41311985 Msa0163300:intron 30.0%
! TCTTGAGATAGGTTTTTGTT+AGG - chr1_4:41312079-41312098 None:intergenic 30.0%
! AAAAACCAGTTTTCTTGTTG+AGG - chr1_4:41312162-41312181 None:intergenic 30.0%
! CTCACTTGCAAATAAGTTTT+TGG - chr1_4:41312231-41312250 None:intergenic 30.0%
TTTGCAAGTGAGAATTCTAT+AGG + chr1_4:41312239-41312258 Msa0163300:intron 30.0%
CCAGTTTAAGCATGATTATT+AGG - chr1_4:41312306-41312325 None:intergenic 30.0%
CCTAATAATCATGCTTAAAC+TGG + chr1_4:41312303-41312322 Msa0163300:intron 30.0%
! CTCATTATTTTCTGACTGAT+AGG - chr1_4:41312568-41312587 None:intergenic 30.0%
CTATCAGTCAGAAAATAATG+AGG + chr1_4:41312566-41312585 Msa0163300:CDS 30.0%
TTTGAATTAGACTACTCACA+AGG + chr1_4:41312602-41312621 Msa0163300:intron 30.0%
GACTTTATGTTACAAACTAG+AGG + chr1_4:41312741-41312760 Msa0163300:intron 30.0%
TTACTAGGATTCATGTACAA+TGG - chr1_4:41312782-41312801 None:intergenic 30.0%
TGTACATGAATCCTAGTAAA+TGG + chr1_4:41312783-41312802 Msa0163300:intron 30.0%
GCTAAAGTAGTCAATACAAA+TGG - chr1_4:41312954-41312973 None:intergenic 30.0%
TGTGTTTATATTGCTTTGAC+AGG + chr1_4:41313002-41313021 Msa0163300:intron 30.0%
TAAAAGAACCTTAACTGACA+TGG + chr1_4:41313475-41313494 Msa0163300:CDS 30.0%
AATCTCATCCTTATATCTAG+TGG - chr1_4:41314060-41314079 None:intergenic 30.0%
GATATAAGGATGAGATTGTA+AGG + chr1_4:41314063-41314082 Msa0163300:intron 30.0%
GCTCCTTATAAATATTGAAG+TGG + chr1_4:41314279-41314298 Msa0163300:intron 30.0%
! TTCTCTCGTTTACATTTTCT+AGG - chr1_4:41314323-41314342 None:intergenic 30.0%
TGTAGATTCAGATGATGAAA+TGG + chr1_4:41314688-41314707 Msa0163300:CDS 30.0%
ATGGATGAAGTTAAATGATC+AGG + chr1_4:41314707-41314726 Msa0163300:exon 30.0%
ACAAAACTTAACATTCTTCC+TGG + chr1_4:41314755-41314774 Msa0163300:three_prime_UTR 30.0%
ATATTTCTTAGAGAGGAGTT+GGG + chr1_4:41314836-41314855 Msa0163300:three_prime_UTR 30.0%
GTTGTAAAAGAGATGCAATA+TGG - chr1_4:41315026-41315045 Msa0163310:CDS 30.0%
!!! GGGACATACTTTTAGTTTTA+AGG + chr1_4:41315233-41315252 Msa0163300:three_prime_UTR 30.0%
AAAATTGAGCTAAAGTCATG+TGG - chr1_4:41315458-41315477 Msa0163310:intron 30.0%
GTTTAAACTTCCTCAAATTC+TGG + chr1_4:41315480-41315499 Msa0163300:three_prime_UTR 30.0%
TAGTGAAATAGAGAAGGAAG+AGG - chr1_4:41300113-41300132 None:intergenic 35.0%
TTTCTTCTTCAACCGTTACA+TGG + chr1_4:41300196-41300215 Msa0163300:exon 35.0%
GAGATTTAACTGCCATGTAA+CGG - chr1_4:41300211-41300230 None:intergenic 35.0%
AAAGCAGAAGGATAGAGAAA+TGG - chr1_4:41300268-41300287 None:intergenic 35.0%
!! GTGTTTGTTCTAGCTTCAAT+TGG + chr1_4:41300325-41300344 Msa0163300:intron 35.0%
!!! CCCTTTTTTGTAGGTAATTC+AGG + chr1_4:41300584-41300603 Msa0163300:intron 35.0%
CTTTAATCATATACTCGTGG+AGG - chr1_4:41300651-41300670 None:intergenic 35.0%
! ATAGGACCTATTTTACTGAC+GGG - chr1_4:41300797-41300816 None:intergenic 35.0%
TACTAGCAATTGGGAATAGA+CGG - chr1_4:41300827-41300846 None:intergenic 35.0%
TCAATCTAAGAAGAATGAGG+TGG + chr1_4:41300972-41300991 Msa0163300:intron 35.0%
CAATCTAAGAAGAATGAGGT+GGG + chr1_4:41300973-41300992 Msa0163300:intron 35.0%
TGTCGTAGATTCAAATCCTA+CGG - chr1_4:41301007-41301026 None:intergenic 35.0%
AGGATTTGAATCTACGACAT+TGG + chr1_4:41301008-41301027 Msa0163300:intron 35.0%
GGATTTGAATCTACGACATT+GGG + chr1_4:41301009-41301028 Msa0163300:intron 35.0%
ATGCTAGTCACATTCATTGT+GGG - chr1_4:41301229-41301248 None:intergenic 35.0%
! TAGGCAAAATCTTCTTTTGG+TGG + chr1_4:41301350-41301369 Msa0163300:intron 35.0%
TGATTCTATGATTATGGTCG+CGG + chr1_4:41301402-41301421 Msa0163300:intron 35.0%
GGTGTAAGAAAAACTCAGAT+TGG + chr1_4:41301843-41301862 Msa0163300:intron 35.0%
TTGGAGAAGAATATTGTCTG+TGG + chr1_4:41301862-41301881 Msa0163300:intron 35.0%
TGGAGAAGAATATTGTCTGT+GGG + chr1_4:41301863-41301882 Msa0163300:intron 35.0%
AGCAACTTATGACATGTTCA+TGG + chr1_4:41302141-41302160 Msa0163300:intron 35.0%
AACTTATTTCAACAGGCTTC+AGG + chr1_4:41302178-41302197 Msa0163300:intron 35.0%
TGCCCCATTTACTAAATAGT+AGG - chr1_4:41302603-41302622 None:intergenic 35.0%
!!! CATTTTTTCAAGGTTAGCAC+TGG - chr1_4:41302800-41302819 None:intergenic 35.0%
GTGCTAACCTTGAAAAAATG+AGG + chr1_4:41302800-41302819 Msa0163300:CDS 35.0%
!!! TTGCTGTTTTAACACCAACA+AGG - chr1_4:41303222-41303241 None:intergenic 35.0%
GTGTTAAAACAGCAATGTTC+AGG + chr1_4:41303227-41303246 Msa0163300:intron 35.0%
AGCAATGTTCAGGTAGTTAT+TGG + chr1_4:41303237-41303256 Msa0163300:intron 35.0%
ACATAATACCAACTCATCTG+CGG + chr1_4:41303320-41303339 Msa0163300:intron 35.0%
!! AACTGAAAGGCATTACTTTG+TGG + chr1_4:41303462-41303481 Msa0163300:intron 35.0%
CCATTACATCACTACTGAAT+TGG - chr1_4:41303519-41303538 None:intergenic 35.0%
CCAATTCAGTAGTGATGTAA+TGG + chr1_4:41303516-41303535 Msa0163300:intron 35.0%
CACATTGATAAGCAGTTATG+TGG - chr1_4:41303568-41303587 None:intergenic 35.0%
CATAACTGCTTATCAATGTG+CGG + chr1_4:41303568-41303587 Msa0163300:intron 35.0%
!! TCCTAATTAAGTTGGTCCTT+TGG + chr1_4:41303637-41303656 Msa0163300:intron 35.0%
GACAGCTTGTCAATGATAAT+GGG - chr1_4:41303831-41303850 None:intergenic 35.0%
TGACAGCTTGTCAATGATAA+TGG - chr1_4:41303832-41303851 None:intergenic 35.0%
CAGTTATTAAATGTCCAGCT+TGG + chr1_4:41303850-41303869 Msa0163300:intron 35.0%
GTTATTAAATGTCCAGCTTG+GGG + chr1_4:41303852-41303871 Msa0163300:intron 35.0%
! ATCAGTCTAGGTTGAATGTT+AGG - chr1_4:41304089-41304108 None:intergenic 35.0%
ACCTAGACTGATAGTATAAC+TGG + chr1_4:41304097-41304116 Msa0163300:intron 35.0%
ACCAGTTATACTATCAGTCT+AGG - chr1_4:41304101-41304120 None:intergenic 35.0%
! CTTTCAGTATTGAAACGTCT+CGG + chr1_4:41304172-41304191 Msa0163300:intron 35.0%
CAAAAGTCTATGCAAATTCG+TGG + chr1_4:41304229-41304248 Msa0163300:intron 35.0%
!!! CCGTTGGTTTGTTTTTTATC+TGG - chr1_4:41304411-41304430 None:intergenic 35.0%
GATACTGGTATCTATTTGAG+TGG + chr1_4:41304526-41304545 Msa0163300:intron 35.0%
TGGGTTTGATCTTCAAATGA+GGG + chr1_4:41304546-41304565 Msa0163300:intron 35.0%
GGGAAAAATAAACAAAGCAG+AGG + chr1_4:41304566-41304585 Msa0163300:intron 35.0%
AATAAACAAAGCAGAGGGTT+AGG + chr1_4:41304572-41304591 Msa0163300:intron 35.0%
ATAAACAAAGCAGAGGGTTA+GGG + chr1_4:41304573-41304592 Msa0163300:intron 35.0%
! CTTCTGCATTTGAAACTCAA+GGG - chr1_4:41304602-41304621 None:intergenic 35.0%
! ACTTCTGCATTTGAAACTCA+AGG - chr1_4:41304603-41304622 None:intergenic 35.0%
TTGAGTTTCAAATGCAGAAG+TGG + chr1_4:41304602-41304621 Msa0163300:intron 35.0%
! TGTTCAAGTTAGAACGAGTA+TGG + chr1_4:41304933-41304952 Msa0163300:intron 35.0%
! ATATAATAAGGAGTACACGG+CGG - chr1_4:41305209-41305228 None:intergenic 35.0%
TTCTATCTCTGCTATCATCT+CGG - chr1_4:41305252-41305271 None:intergenic 35.0%
CTTGTGTTGTACCCTTAATA+TGG + chr1_4:41305610-41305629 Msa0163300:intron 35.0%
GCAACATTTACACAAGTTTC+AGG - chr1_4:41305826-41305845 None:intergenic 35.0%
GTTAATAAGTTTGAAGGGGA+CGG + chr1_4:41305974-41305993 Msa0163300:CDS 35.0%
TTAATAAGTTTGAAGGGGAC+GGG + chr1_4:41305975-41305994 Msa0163300:CDS 35.0%
ATTGCTGCAATTGCTAAACT+TGG + chr1_4:41306206-41306225 Msa0163300:CDS 35.0%
TGAGATAACTGGTAGTTTGA+TGG + chr1_4:41306271-41306290 Msa0163300:CDS 35.0%
!!! TTTTAGAGCAAACGTTGAGT+GGG + chr1_4:41306397-41306416 Msa0163300:CDS 35.0%
!! GTTCAGAAGAGGTTATTTTC+TGG + chr1_4:41306420-41306439 Msa0163300:CDS 35.0%
!! GGTTATTTTCTGGGTAAATC+TGG + chr1_4:41306430-41306449 Msa0163300:CDS 35.0%
!! TTTTGAAGACACTGTGGTTT+TGG + chr1_4:41306542-41306561 Msa0163300:intron 35.0%
TGATGTTGGATTGAATGTCA+AGG + chr1_4:41306576-41306595 Msa0163300:intron 35.0%
AATCATTTCTATCCCTAGTG+GGG - chr1_4:41306895-41306914 None:intergenic 35.0%
GCTTCAATTGAATGTTACCA+TGG + chr1_4:41307090-41307109 Msa0163300:intron 35.0%
GAGAAGGATTTGGCTATATT+TGG + chr1_4:41307124-41307143 Msa0163300:CDS 35.0%
! CGAACATTTCTTTTGGCAAA+TGG + chr1_4:41307175-41307194 Msa0163300:CDS 35.0%
!! GGAGTGTCATGAATAGTTTT+TGG + chr1_4:41307296-41307315 Msa0163300:intron 35.0%
! AACTAATGGATGAGAGTTGT+GGG - chr1_4:41307551-41307570 None:intergenic 35.0%
AGCATACATCGTTAAATGCA+AGG - chr1_4:41307609-41307628 None:intergenic 35.0%
!! CATTTGCTGTTTGCTCTTAT+TGG + chr1_4:41307792-41307811 Msa0163300:CDS 35.0%
!!! TCAGCTGCTTTTACATTTGA+AGG - chr1_4:41307857-41307876 None:intergenic 35.0%
TCAGCAGCATCATATTCATT+TGG + chr1_4:41308159-41308178 Msa0163300:intron 35.0%
TATATAAAACGGCTACACGT+GGG - chr1_4:41308274-41308293 None:intergenic 35.0%
TTATATAAAACGGCTACACG+TGG - chr1_4:41308275-41308294 None:intergenic 35.0%
!! CGTGTAGCCGTTTTATATAA+TGG + chr1_4:41308275-41308294 Msa0163300:intron 35.0%
TTACCACTACAGCTGTTATT+TGG - chr1_4:41308322-41308341 None:intergenic 35.0%
! CAACCATGAATGCCAATTTT+GGG - chr1_4:41308371-41308390 None:intergenic 35.0%
! ACAACCATGAATGCCAATTT+TGG - chr1_4:41308372-41308391 None:intergenic 35.0%
TGGTTGTTCTTGTCTTAATG+TGG + chr1_4:41308443-41308462 Msa0163300:intron 35.0%
CTCAATACGAAATTCGAAAC+TGG + chr1_4:41308524-41308543 Msa0163300:intron 35.0%
! TTGGTGGATACTTCTTTCTA+CGG + chr1_4:41308574-41308593 Msa0163300:intron 35.0%
! CATGGCTACTCTAAAAAAGA+TGG + chr1_4:41308626-41308645 Msa0163300:intron 35.0%
GATGTATTTGAGAACTACCA+TGG - chr1_4:41308745-41308764 None:intergenic 35.0%
AAAGTCCATACAATCCTTTC+AGG + chr1_4:41308770-41308789 Msa0163300:intron 35.0%
CATTTCCTGAAAGGATTGTA+TGG - chr1_4:41308778-41308797 None:intergenic 35.0%
CTCTAAGTTCATTTCCTGAA+AGG - chr1_4:41308787-41308806 None:intergenic 35.0%
CTTTCAGGAAATGAACTTAG+AGG + chr1_4:41308785-41308804 Msa0163300:intron 35.0%
GATATGTCAGTAAGACTTGT+TGG + chr1_4:41308869-41308888 Msa0163300:intron 35.0%
ACAGTACAAGACAATTAGCT+TGG - chr1_4:41309014-41309033 None:intergenic 35.0%
AAGCTAATTGTCTTGTACTG+TGG + chr1_4:41309013-41309032 Msa0163300:intron 35.0%
ATAATAGGTGGCACAATGAT+TGG - chr1_4:41309141-41309160 None:intergenic 35.0%
GATGCCAAGAAAATAGTTGA+CGG + chr1_4:41309199-41309218 Msa0163300:CDS 35.0%
ATGCCAAGAAAATAGTTGAC+GGG + chr1_4:41309200-41309219 Msa0163300:CDS 35.0%
AATACACTACTGAAATGGAG+AGG - chr1_4:41309323-41309342 None:intergenic 35.0%
TAAGAAAGAAGCTGAATTCC+TGG + chr1_4:41309624-41309643 Msa0163300:CDS 35.0%
CACACTATTATACCAGGAAT+TGG - chr1_4:41309729-41309748 None:intergenic 35.0%
CTTTGACACACTATTATACC+AGG - chr1_4:41309735-41309754 None:intergenic 35.0%
AAAGAGGTCATGTACTTTCA+AGG - chr1_4:41309765-41309784 None:intergenic 35.0%
! CTGAAAGTGGGAATCTTTTT+CGG + chr1_4:41309829-41309848 Msa0163300:intron 35.0%
CAATTCAGGACACGATTATT+TGG - chr1_4:41309864-41309883 None:intergenic 35.0%
GATTGACTGATCAACATAAC+AGG + chr1_4:41309902-41309921 Msa0163300:intron 35.0%
CCAGATAATAATCAGTGATG+GGG + chr1_4:41309932-41309951 Msa0163300:intron 35.0%
! ATGGGGTTTGATAATAACGT+AGG + chr1_4:41309949-41309968 Msa0163300:intron 35.0%
AAAACAAATTGGCCCCTAAA+TGG + chr1_4:41310037-41310056 Msa0163300:intron 35.0%
! CGAAAGATTAATTTGGTGGA+TGG + chr1_4:41310086-41310105 Msa0163300:intron 35.0%
! ACATATACTTCCCATCGTTT+TGG - chr1_4:41310170-41310189 None:intergenic 35.0%
AGCTCACTTCATTTCTCTAA+TGG + chr1_4:41310225-41310244 Msa0163300:intron 35.0%
GCTCACTTCATTTCTCTAAT+GGG + chr1_4:41310226-41310245 Msa0163300:intron 35.0%
GTAGCCATTTGGTTAATAAG+CGG - chr1_4:41310284-41310303 None:intergenic 35.0%
AGAAGGCAAAATCTATGTTC+GGG - chr1_4:41310438-41310457 None:intergenic 35.0%
GGAGTAATGTGAGTTATACT+TGG + chr1_4:41310596-41310615 Msa0163300:intron 35.0%
ACAGAATATTTGCTTGCCAA+TGG + chr1_4:41310702-41310721 Msa0163300:intron 35.0%
!! GAGTTTAATAGAAGCACCAT+TGG - chr1_4:41310721-41310740 None:intergenic 35.0%
TGCTTCTATTAAACTCATGC+AGG + chr1_4:41310725-41310744 Msa0163300:intron 35.0%
GCTTCTATTAAACTCATGCA+GGG + chr1_4:41310726-41310745 Msa0163300:intron 35.0%
!! TCTGGTTAGCTCTATGTAAA+TGG + chr1_4:41310929-41310948 Msa0163300:intron 35.0%
AGACAAATTGGAAAATCTCG+TGG + chr1_4:41310974-41310993 Msa0163300:intron 35.0%
ATCAACATCGTCAAATGATG+AGG - chr1_4:41311081-41311100 None:intergenic 35.0%
!! AGATAGAAGAGTGTGTTTTG+CGG - chr1_4:41311549-41311568 None:intergenic 35.0%
TGAATGTCTCATGAGATTTG+AGG + chr1_4:41311649-41311668 Msa0163300:intron 35.0%
GAATGTCTCATGAGATTTGA+GGG + chr1_4:41311650-41311669 Msa0163300:intron 35.0%
GTATATGCTATTCCACCTTT+GGG + chr1_4:41311805-41311824 Msa0163300:intron 35.0%
TATATGCTATTCCACCTTTG+GGG + chr1_4:41311806-41311825 Msa0163300:intron 35.0%
! GTTTTCAGTATAGTTGTAGG+TGG + chr1_4:41311891-41311910 Msa0163300:intron 35.0%
GAACAGAACAGTGATTCATT+TGG + chr1_4:41312325-41312344 Msa0163300:intron 35.0%
! ATTCATTTGGTTTAGCTGCA+TGG + chr1_4:41312338-41312357 Msa0163300:intron 35.0%
TCAAAGCGAAGGATTTCATT+GGG - chr1_4:41312495-41312514 None:intergenic 35.0%
! TTTCAAGTGAAGTGGACATT+AGG - chr1_4:41312700-41312719 None:intergenic 35.0%
ATGTCCACTTCACTTGAAAA+AGG + chr1_4:41312701-41312720 Msa0163300:intron 35.0%
! GATTTGATGATCAGTGATGA+TGG + chr1_4:41313024-41313043 Msa0163300:CDS 35.0%
CAAACTAAAAGAAACGGGAA+CGG + chr1_4:41313128-41313147 Msa0163300:CDS 35.0%
ACTCATCTGCTTTATGACAT+TGG + chr1_4:41313175-41313194 Msa0163300:intron 35.0%
ATCTGCTTTATGACATTGGT+CGG + chr1_4:41313179-41313198 Msa0163300:intron 35.0%
AAAGTCTGCGCTTAATAAAC+AGG + chr1_4:41313343-41313362 Msa0163300:intron 35.0%
AATAAACAGGATGTCTTGCA+AGG + chr1_4:41313356-41313375 Msa0163300:intron 35.0%
!! CAACTTCTTGCTATTGATGT+TGG + chr1_4:41313383-41313402 Msa0163300:CDS 35.0%
TTGGTCAAAAGGACCTTAAT+AGG + chr1_4:41313419-41313438 Msa0163300:CDS 35.0%
GGTCAATTCATCACCTATTA+AGG - chr1_4:41313435-41313454 None:intergenic 35.0%
!! AGAAGCATTAAAATGCCGAT+AGG - chr1_4:41313512-41313531 None:intergenic 35.0%
!! CATAAAGGTGTTCAACTTAC+AGG - chr1_4:41313536-41313555 None:intergenic 35.0%
CTGAATAATATGTCCTGTTC+TGG + chr1_4:41313576-41313595 Msa0163300:intron 35.0%
! AATCACGTCTTGTTCAAACA+TGG + chr1_4:41313668-41313687 Msa0163300:intron 35.0%
! ATCACGTCTTGTTCAAACAT+GGG + chr1_4:41313669-41313688 Msa0163300:intron 35.0%
!!! CAGTTTTGATTTGCCAACTT+AGG - chr1_4:41313729-41313748 None:intergenic 35.0%
GTGTATGCTTCCAACATAAA+TGG + chr1_4:41313813-41313832 Msa0163300:intron 35.0%
CAAAGATGTAGTAGACCTTA+AGG + chr1_4:41313940-41313959 Msa0163300:intron 35.0%
GAAAAAAAGGAAGGAGTAAG+TGG + chr1_4:41314004-41314023 Msa0163300:intron 35.0%
TCCTTATATCTAGTGGTCAT+GGG - chr1_4:41314053-41314072 None:intergenic 35.0%
ATCCTTATATCTAGTGGTCA+TGG - chr1_4:41314054-41314073 None:intergenic 35.0%
CTAACATGTCCATGTATACA+AGG + chr1_4:41314193-41314212 Msa0163300:intron 35.0%
GTACATTGTCCTTGTATACA+TGG - chr1_4:41314205-41314224 None:intergenic 35.0%
TGTAAACGAGAGAAGATAGA+AGG + chr1_4:41314329-41314348 Msa0163300:intron 35.0%
! GGAAAATGTTTTCTTCACAC+AGG + chr1_4:41314413-41314432 Msa0163300:intron 35.0%
CATAATGTTTATACCAGGGA+TGG - chr1_4:41314489-41314508 None:intergenic 35.0%
ATCATCTGAATCTACATCAC+TGG - chr1_4:41314684-41314703 None:intergenic 35.0%
TGATGCCATATTTCTTAGAG+AGG + chr1_4:41314829-41314848 Msa0163300:three_prime_UTR 35.0%
! CAACTCCTCTCTAAGAAATA+TGG - chr1_4:41314837-41314856 Msa0163310:CDS 35.0%
CATATTTCTTAGAGAGGAGT+TGG + chr1_4:41314835-41314854 Msa0163300:three_prime_UTR 35.0%
ATAAGTTCATTCCACATGTC+TGG + chr1_4:41314864-41314883 Msa0163300:three_prime_UTR 35.0%
TCACATATCTTTCGGAATTG+AGG - chr1_4:41314977-41314996 Msa0163310:CDS 35.0%
GATGTGTAAATTTGATGCGA+GGG + chr1_4:41315212-41315231 Msa0163300:three_prime_UTR 35.0%
ATGTGTAAATTTGATGCGAG+GGG + chr1_4:41315213-41315232 Msa0163300:three_prime_UTR 35.0%
GCGTGGTCGAAAACAAAAAA+TGG - chr1_4:41300088-41300107 None:intergenic 40.0%
!! CTATCCTTCTGCTTTGTTTC+AGG + chr1_4:41300273-41300292 Msa0163300:intron 40.0%
! CAATTGGCTTCGTTAGTAGA+CGG + chr1_4:41300341-41300360 Msa0163300:intron 40.0%
AGGCACTCAAAAATCAACAC+TGG - chr1_4:41300631-41300650 None:intergenic 40.0%
!! CAACTTGTTGGTTGGTCTAA+TGG + chr1_4:41300713-41300732 Msa0163300:intron 40.0%
AACTACTTTAGCCACTTCAG+CGG - chr1_4:41300774-41300793 None:intergenic 40.0%
GTAGTTCCCGTCAGTAAAAT+AGG + chr1_4:41300788-41300807 Msa0163300:intron 40.0%
TTCTCCGTCAGTTGAATTAG+TGG + chr1_4:41300875-41300894 Msa0163300:intron 40.0%
! GAATCTACGACATTGGGTTT+TGG + chr1_4:41301015-41301034 Msa0163300:intron 40.0%
CATGCTAGTCACATTCATTG+TGG - chr1_4:41301230-41301249 None:intergenic 40.0%
CACAATGAATGTGACTAGCA+TGG + chr1_4:41301228-41301247 Msa0163300:intron 40.0%
TTATGGCATGTTCATGCCAT+AGG + chr1_4:41302076-41302095 Msa0163300:intron 40.0%
AACTTATTTCCACAAGCTCC+AGG + chr1_4:41302256-41302275 Msa0163300:intron 40.0%
ATTCGAAAGGCAGCAATTTG+AGG - chr1_4:41302539-41302558 None:intergenic 40.0%
TCAAATTGCTGCCTTTCGAA+TGG + chr1_4:41302538-41302557 Msa0163300:CDS 40.0%
! TAGTGTAGGGAGAAAAGTGT+CGG + chr1_4:41302567-41302586 Msa0163300:CDS 40.0%
TAAATGGGGCAGTTCAAGAA+AGG + chr1_4:41302612-41302631 Msa0163300:CDS 40.0%
AAATGGGGCAGTTCAAGAAA+GGG + chr1_4:41302613-41302632 Msa0163300:CDS 40.0%
! CATGATTTGTCTTTGAGCAG+TGG + chr1_4:41302649-41302668 Msa0163300:CDS 40.0%
! GATGATGGTATGACTGTCAA+CGG + chr1_4:41302757-41302776 Msa0163300:CDS 40.0%
ATGATGGTATGACTGTCAAC+GGG + chr1_4:41302758-41302777 Msa0163300:CDS 40.0%
! AAGCTTTATATGATGCAGCC+AGG + chr1_4:41302875-41302894 Msa0163300:CDS 40.0%
! AGCTTTATATGATGCAGCCA+GGG + chr1_4:41302876-41302895 Msa0163300:CDS 40.0%
AATTGCTAGCTCAAAAACCC+TGG - chr1_4:41302896-41302915 None:intergenic 40.0%
! ATCCACGTGATGACGATTTA+TGG - chr1_4:41302924-41302943 None:intergenic 40.0%
ATAGGAGACAACCTTTGTGA+TGG + chr1_4:41303101-41303120 Msa0163300:intron 40.0%
AGAACAACATGCCATCACAA+AGG - chr1_4:41303115-41303134 None:intergenic 40.0%
CACGCTAGATGAACTGTAAA+AGG + chr1_4:41303166-41303185 Msa0163300:intron 40.0%
TTAAGTTACCGCAGATGAGT+TGG - chr1_4:41303331-41303350 None:intergenic 40.0%
GCCAAAGGACCAACTTAATT+AGG - chr1_4:41303641-41303660 None:intergenic 40.0%
AAAACTCTGTATCTGGCCAA+AGG - chr1_4:41303656-41303675 None:intergenic 40.0%
TACACTAAATTACCCCAAGC+TGG - chr1_4:41303867-41303886 None:intergenic 40.0%
GTGGGTTTGATCTTCAAATG+AGG + chr1_4:41304545-41304564 Msa0163300:intron 40.0%
TGTTCGAACGTAGAAAGCAA+GGG + chr1_4:41304653-41304672 Msa0163300:intron 40.0%
TGAAGTGCAGAAAGCAAACA+TGG + chr1_4:41304803-41304822 Msa0163300:intron 40.0%
GAGACTGAGTTAGCCATATT+TGG + chr1_4:41304969-41304988 Msa0163300:intron 40.0%
TCTATCTCTGCTATCATCTC+GGG - chr1_4:41305251-41305270 None:intergenic 40.0%
CGAGCGAATCAAATATTGGA+AGG - chr1_4:41305714-41305733 None:intergenic 40.0%
TCTCTGATTAAGCTCTCCAA+GGG - chr1_4:41305878-41305897 None:intergenic 40.0%
TTCTCTGATTAAGCTCTCCA+AGG - chr1_4:41305879-41305898 None:intergenic 40.0%
CAAAACCATTCGTACACTTC+AGG - chr1_4:41305920-41305939 None:intergenic 40.0%
! CTGAAGTGTACGAATGGTTT+TGG + chr1_4:41305918-41305937 Msa0163300:CDS 40.0%
TCCCAGGTCTGAAAAAACTA+AGG + chr1_4:41306133-41306152 Msa0163300:intron 40.0%
!!! CCCTTAGTTTTTTCAGACCT+GGG - chr1_4:41306137-41306156 None:intergenic 40.0%
CCCAGGTCTGAAAAAACTAA+GGG + chr1_4:41306134-41306153 Msa0163300:intron 40.0%
!!! ACCCTTAGTTTTTTCAGACC+TGG - chr1_4:41306138-41306157 None:intergenic 40.0%
! TGTGAGCAAGAAACTTTTGC+CGG - chr1_4:41306233-41306252 None:intergenic 40.0%
!!! CTTTTAGAGCAAACGTTGAG+TGG + chr1_4:41306396-41306415 Msa0163300:CDS 40.0%
! TTTAGAGCAAACGTTGAGTG+GGG + chr1_4:41306398-41306417 Msa0163300:CDS 40.0%
!! GACAACATCTGAAAGCATTG+AGG + chr1_4:41306505-41306524 Msa0163300:CDS 40.0%
!!! GTTCAGTTTTGAAGACACTG+TGG + chr1_4:41306536-41306555 Msa0163300:intron 40.0%
GACATTCAATCCAACATCAC+CGG - chr1_4:41306575-41306594 None:intergenic 40.0%
TCATTACTTTCTACCCCACT+AGG + chr1_4:41306879-41306898 Msa0163300:intron 40.0%
CATTACTTTCTACCCCACTA+GGG + chr1_4:41306880-41306899 Msa0163300:intron 40.0%
TTAAGCATATTCCTCCATGC+TGG - chr1_4:41306927-41306946 None:intergenic 40.0%
ATTGAATGTTACCATGGTGC+AGG + chr1_4:41307096-41307115 Msa0163300:intron 40.0%
! CTTTTGGCAAATGGTTTCGA+TGG + chr1_4:41307184-41307203 Msa0163300:CDS 40.0%
CTAGTTGTACTGCTAGGATT+TGG + chr1_4:41307330-41307349 Msa0163300:CDS 40.0%
!! GATAAAGGTGCTTAAGTTGC+AGG - chr1_4:41307424-41307443 None:intergenic 40.0%
! GAACTAATGGATGAGAGTTG+TGG - chr1_4:41307552-41307571 None:intergenic 40.0%
GGGAAGTTCTTTAACTGCAT+AGG + chr1_4:41307652-41307671 Msa0163300:intron 40.0%
! ATAGGTAGTTTGTGAAGAGC+TGG + chr1_4:41307670-41307689 Msa0163300:intron 40.0%
! TAGTTTGTGAAGAGCTGGAT+TGG + chr1_4:41307675-41307694 Msa0163300:CDS 40.0%
!!! GGATTGGCTTCCTTTTTATC+CGG + chr1_4:41307691-41307710 Msa0163300:CDS 40.0%
!!! GATTGGCTTCCTTTTTATCC+GGG + chr1_4:41307692-41307711 Msa0163300:CDS 40.0%
! ATGAGACTGTTTTGTGATGC+TGG - chr1_4:41307723-41307742 None:intergenic 40.0%
AGCATCACAAAACAGTCTCA+TGG + chr1_4:41307722-41307741 Msa0163300:CDS 40.0%
GCATCACAAAACAGTCTCAT+GGG + chr1_4:41307723-41307742 Msa0163300:CDS 40.0%
AGAGCAAACAGCAAATGCTT+GGG - chr1_4:41307789-41307808 None:intergenic 40.0%
AAGAGCAAACAGCAAATGCT+TGG - chr1_4:41307790-41307809 None:intergenic 40.0%
! TGTTAGGCACAACAAGTTGA+TGG + chr1_4:41307974-41307993 Msa0163300:intron 40.0%
GAATATGCACATGCACCTAA+TGG - chr1_4:41308072-41308091 None:intergenic 40.0%
! TGTTATTTGGCTGTTGTTGG+CGG - chr1_4:41308309-41308328 None:intergenic 40.0%
! AGCTGTTATTTGGCTGTTGT+TGG - chr1_4:41308312-41308331 None:intergenic 40.0%
ACAGCTGTAGTGGTAAAGTT+CGG + chr1_4:41308326-41308345 Msa0163300:intron 40.0%
TAGTCATTCCAGCCCAAAAT+TGG + chr1_4:41308356-41308375 Msa0163300:intron 40.0%
GGAGGATTGTCAAACATTCA+TGG + chr1_4:41308423-41308442 Msa0163300:intron 40.0%
! TCCTACAAATGCTCTTTTGG+TGG + chr1_4:41308558-41308577 Msa0163300:intron 40.0%
!! TCCACCAAAAGAGCATTTGT+AGG - chr1_4:41308562-41308581 None:intergenic 40.0%
AGCCTCTAGATTCAACTCTT+GGG - chr1_4:41308671-41308690 None:intergenic 40.0%
TAGCCTCTAGATTCAACTCT+TGG - chr1_4:41308672-41308691 None:intergenic 40.0%
CTGTATCTATGCACAAACCA+TGG + chr1_4:41308725-41308744 Msa0163300:intron 40.0%
ACCTCTCTAATATGTGACTC+TGG + chr1_4:41308831-41308850 Msa0163300:intron 40.0%
!!! TGGAAACATTTTTTCTGCCG+TGG - chr1_4:41308994-41309013 None:intergenic 40.0%
! TTGCCCGTCAACTATTTTCT+TGG - chr1_4:41309206-41309225 None:intergenic 40.0%
CAGTCAACGATAAAAGACTC+AGG + chr1_4:41309238-41309257 Msa0163300:CDS 40.0%
! AGACTCAGGTTCTTTTGATG+AGG + chr1_4:41309252-41309271 Msa0163300:CDS 40.0%
AGGCATGAAGATGTCAGATT+AGG - chr1_4:41309350-41309369 None:intergenic 40.0%
! AAAAGCTGATTCTCTGCAAG+AGG + chr1_4:41309663-41309682 Msa0163300:CDS 40.0%
GGTTGTGGATGATATTGTAG+AGG - chr1_4:41309699-41309718 None:intergenic 40.0%
ATACCAGGAATTGGTAAAGG+AGG - chr1_4:41309720-41309739 None:intergenic 40.0%
CGAAAAAGATTCCCACTTTC+AGG - chr1_4:41309831-41309850 None:intergenic 40.0%
TTCAGGACACGATTATTTGG+AGG - chr1_4:41309861-41309880 None:intergenic 40.0%
ACTGATCAACATAACAGGGA+TGG + chr1_4:41309907-41309926 Msa0163300:intron 40.0%
! CCCCATCACTGATTATTATC+TGG - chr1_4:41309935-41309954 None:intergenic 40.0%
ATAAGCGGCTACTCTATTAC+AGG - chr1_4:41310269-41310288 None:intergenic 40.0%
GTAGCCGCTTATTAACCAAA+TGG + chr1_4:41310277-41310296 Msa0163300:intron 40.0%
ACAAATGCAAGAGGGATGAA+GGG - chr1_4:41310413-41310432 None:intergenic 40.0%
AACAAATGCAAGAGGGATGA+AGG - chr1_4:41310414-41310433 None:intergenic 40.0%
GAAGGCAAAATCTATGTTCG+GGG - chr1_4:41310437-41310456 None:intergenic 40.0%
! GACATAAAACTGGCTCAAGA+AGG - chr1_4:41310455-41310474 None:intergenic 40.0%
!!! GCTTTTTTCCATGGCATTTC+AGG + chr1_4:41310539-41310558 Msa0163300:intron 40.0%
TAGTGATCAAACCATCACAC+CGG + chr1_4:41310755-41310774 Msa0163300:CDS 40.0%
AGGAGGACAGGTTTATGAAA+GGG + chr1_4:41310784-41310803 Msa0163300:CDS 40.0%
ATGACAATGTAAAGGTGGAC+AGG + chr1_4:41310820-41310839 Msa0163300:CDS 40.0%
TTGGAAAATCTCGTGGATTC+TGG + chr1_4:41310981-41311000 Msa0163300:CDS 40.0%
ACATCGTCAAATGATGAGGA+AGG - chr1_4:41311077-41311096 None:intergenic 40.0%
GGTATATGCTATTCCACCTT+TGG + chr1_4:41311804-41311823 Msa0163300:intron 40.0%
GTTTCTCGTTGCATCTTTAC+AGG - chr1_4:41311953-41311972 None:intergenic 40.0%
! GGTTAGTTACGAACTGGATT+TGG + chr1_4:41312013-41312032 Msa0163300:intron 40.0%
! ACCAGTTTTCTTGTTGAGGT+GGG - chr1_4:41312158-41312177 None:intergenic 40.0%
! AACCAGTTTTCTTGTTGAGG+TGG - chr1_4:41312159-41312178 None:intergenic 40.0%
CACTTTACGAATAATGAGGG+AGG - chr1_4:41312191-41312210 None:intergenic 40.0%
CTCCCTCATTATTCGTAAAG+TGG + chr1_4:41312189-41312208 Msa0163300:intron 40.0%
! CGCCACTTTACGAATAATGA+GGG - chr1_4:41312194-41312213 None:intergenic 40.0%
CCTCATTATTCGTAAAGTGG+CGG + chr1_4:41312192-41312211 Msa0163300:intron 40.0%
GAAGGATTTCATTGGGTTCT+TGG - chr1_4:41312488-41312507 None:intergenic 40.0%
CTCAAAGCGAAGGATTTCAT+TGG - chr1_4:41312496-41312515 None:intergenic 40.0%
TTCTTAGAAGCTCAAAGCGA+AGG - chr1_4:41312506-41312525 None:intergenic 40.0%
! GCTTCTAAGAAATGAGCTGA+TGG + chr1_4:41312515-41312534 Msa0163300:CDS 40.0%
AGCTGATGGAACTTGAGAAA+AGG + chr1_4:41312529-41312548 Msa0163300:CDS 40.0%
GCTGATGGAACTTGAGAAAA+GGG + chr1_4:41312530-41312549 Msa0163300:CDS 40.0%
!!! CAGACCTTTTTCAAGTGAAG+TGG - chr1_4:41312708-41312727 None:intergenic 40.0%
AGCTTCACATCCTTATCACA+TGG + chr1_4:41312971-41312990 Msa0163300:intron 40.0%
CAATAGCATGCCATGTGATA+AGG - chr1_4:41312984-41313003 None:intergenic 40.0%
! GATGATGGTGCACGTTATAA+CGG + chr1_4:41313039-41313058 Msa0163300:CDS 40.0%
AAAAGACATGGAATAGGGTG+AGG - chr1_4:41313225-41313244 None:intergenic 40.0%
AAGTGCTTTCTTCTCCTTCT+CGG - chr1_4:41313456-41313475 None:intergenic 40.0%
AACTGAAGCCATGTCAGTTA+AGG - chr1_4:41313486-41313505 None:intergenic 40.0%
ATGGCTTCAGTTGTTCCTAT+CGG + chr1_4:41313494-41313513 Msa0163300:CDS 40.0%
TACACTTCTCTATCCAGAAC+AGG - chr1_4:41313592-41313611 None:intergenic 40.0%
!! GAGTGTTGGTCAAATGAATC+AGG - chr1_4:41313707-41313726 None:intergenic 40.0%
TTTGACCAACACTCCTAAGT+TGG + chr1_4:41313713-41313732 Msa0163300:intron 40.0%
! ATTTGCCAACTTAGGAGTGT+TGG - chr1_4:41313721-41313740 None:intergenic 40.0%
AATCACGCAGCCATTTATGT+TGG - chr1_4:41313826-41313845 None:intergenic 40.0%
AACATAAATGGCTGCGTGAT+TGG + chr1_4:41313825-41313844 Msa0163300:intron 40.0%
ACATAAATGGCTGCGTGATT+GGG + chr1_4:41313826-41313845 Msa0163300:intron 40.0%
AACTCAGGATAGTCATGTGT+GGG - chr1_4:41313881-41313900 None:intergenic 40.0%
AACTCGCAAACAAAGCCTTA+AGG - chr1_4:41313958-41313977 None:intergenic 40.0%
!! TAAGGCTTTGTTTGCGAGTT+TGG + chr1_4:41313958-41313977 Msa0163300:intron 40.0%
GAGGGTTTGGAAAAAAAGGA+AGG + chr1_4:41313995-41314014 Msa0163300:intron 40.0%
GGAGTAAGTGGAAGAAATAG+AGG + chr1_4:41314016-41314035 Msa0163300:intron 40.0%
ACCCATGACCACTAGATATA+AGG + chr1_4:41314049-41314068 Msa0163300:intron 40.0%
AAGAATGAGATTGTGAGCCT+TGG - chr1_4:41314109-41314128 None:intergenic 40.0%
! CTCGTTTACATTTTCTAGGC+AGG - chr1_4:41314319-41314338 None:intergenic 40.0%
GGATGGTACATATCTCTGAA+TGG - chr1_4:41314472-41314491 None:intergenic 40.0%
ATAAGTGGATGGAATCTGCA+AGG - chr1_4:41314600-41314619 None:intergenic 40.0%
CTTCCTGGTCTGATGAAAAT+TGG + chr1_4:41314770-41314789 Msa0163300:three_prime_UTR 40.0%
! GATCCAATTTTCATCAGACC+AGG - chr1_4:41314776-41314795 None:intergenic 40.0%
ATGGTCACCCTTCCAAATAT+CGG - chr1_4:41314950-41314969 Msa0163310:CDS 40.0%
CTTTCGGAATTGAGGAAAGA+TGG - chr1_4:41314969-41314988 Msa0163310:CDS 40.0%
AAGAGATGCAATATGGAAGC+TGG - chr1_4:41315019-41315038 Msa0163310:CDS 40.0%
! AGTTTTGCAGGATCGTTTTC+TGG + chr1_4:41315083-41315102 Msa0163300:three_prime_UTR 40.0%
AGGAAACTGTGACAAAGACA+AGG - chr1_4:41315111-41315130 Msa0163310:CDS 40.0%
GTACAGTGAAATTGCAGGAA+TGG - chr1_4:41315149-41315168 Msa0163310:intron 40.0%
AGTCTGTACAGTGAAATTGC+AGG - chr1_4:41315154-41315173 Msa0163310:intron 40.0%
GGATGTGTAAATTTGATGCG+AGG + chr1_4:41315211-41315230 Msa0163300:three_prime_UTR 40.0%
! TGTGACTGTTTGAGACCTTA+TGG + chr1_4:41315298-41315317 Msa0163300:three_prime_UTR 40.0%
GGTATGCAATCCAGAATTTG+AGG - chr1_4:41315493-41315512 Msa0163310:intron 40.0%
CGAACCTGAAACAAAGCAGA+AGG - chr1_4:41300280-41300299 None:intergenic 45.0%
!! GTTTCAGGTTCGAATCTCTC+TGG + chr1_4:41300288-41300307 Msa0163300:intron 45.0%
TCGTTAGTAGACGGTGAGAT+TGG + chr1_4:41300350-41300369 Msa0163300:intron 45.0%
! GGAATAGACGGACTCTCTAT+AGG - chr1_4:41300815-41300834 None:intergenic 45.0%
CGGAGCAAAATAATCGCTGA+GGG - chr1_4:41301308-41301327 None:intergenic 45.0%
ACGGAGCAAAATAATCGCTG+AGG - chr1_4:41301309-41301328 None:intergenic 45.0%
TTCTATGATTATGGTCGCGG+TGG + chr1_4:41301405-41301424 Msa0163300:intron 45.0%
!! TTTTGACTACCTTGCGTGTG+AGG + chr1_4:41301822-41301841 Msa0163300:intron 45.0%
TTTCTTACACCTCACACGCA+AGG - chr1_4:41301834-41301853 None:intergenic 45.0%
GGTTGAAATTCGGGTCTGTT+TGG + chr1_4:41301982-41302001 Msa0163300:intron 45.0%
ACAAGCTGTCCTAAAGCTTG+TGG - chr1_4:41302119-41302138 None:intergenic 45.0%
ATAAGCTATCCTGGAGCTTG+TGG - chr1_4:41302268-41302287 None:intergenic 45.0%
CACTAGAGGAACCATTCGAA+AGG - chr1_4:41302552-41302571 None:intergenic 45.0%
TCGAATGGTTCCTCTAGTGT+AGG + chr1_4:41302553-41302572 Msa0163300:CDS 45.0%
CGAATGGTTCCTCTAGTGTA+GGG + chr1_4:41302554-41302573 Msa0163300:CDS 45.0%
! CACTTTTCTCCCTACACTAG+AGG - chr1_4:41302566-41302585 None:intergenic 45.0%
TTGTCTTTGAGCAGTGGTCA+AGG + chr1_4:41302655-41302674 Msa0163300:CDS 45.0%
!!! TTACGTTTTCTAAGGCGGGA+AGG + chr1_4:41302704-41302723 Msa0163300:CDS 45.0%
CCATCATCAGAGGTAGCAAA+TGG - chr1_4:41302745-41302764 None:intergenic 45.0%
! CCATTTGCTACCTCTGATGA+TGG + chr1_4:41302742-41302761 Msa0163300:CDS 45.0%
GACAGTCATACCATCATCAG+AGG - chr1_4:41302755-41302774 None:intergenic 45.0%
GACCATAAATCGTCATCACG+TGG + chr1_4:41302919-41302938 Msa0163300:CDS 45.0%
!! GATCCTGGTTTTCAACAGCT+TGG + chr1_4:41302941-41302960 Msa0163300:CDS 45.0%
AAGCCAAGCTGTTGAAAACC+AGG - chr1_4:41302947-41302966 None:intergenic 45.0%
! TGGTTTTCAACAGCTTGGCT+TGG + chr1_4:41302946-41302965 Msa0163300:CDS 45.0%
! GGTTTTCAACAGCTTGGCTT+GGG + chr1_4:41302947-41302966 Msa0163300:CDS 45.0%
!! GTTTTCAACAGCTTGGCTTG+GGG + chr1_4:41302948-41302967 Msa0163300:CDS 45.0%
CACTTCTCTTCTCTCCTCAT+AGG + chr1_4:41303493-41303512 Msa0163300:intron 45.0%
! CACTACTGAATTGGCCTATG+AGG - chr1_4:41303510-41303529 None:intergenic 45.0%
CTGCTTATCAATGTGCGGAT+TGG + chr1_4:41303573-41303592 Msa0163300:intron 45.0%
GAAGGGAAGGATTTGAACTG+AGG + chr1_4:41304447-41304466 Msa0163300:intron 45.0%
! GAAGCAGAAGCGCAATAACT+GGG + chr1_4:41304469-41304488 Msa0163300:intron 45.0%
TCTACGTTCGAACACTCGAT+AGG - chr1_4:41304647-41304666 None:intergenic 45.0%
GTGTTCGAACGTAGAAAGCA+AGG + chr1_4:41304652-41304671 Msa0163300:intron 45.0%
GTTCGAACGTAGAAAGCAAG+GGG + chr1_4:41304654-41304673 Msa0163300:intron 45.0%
! GTGCTCTCTCTAGTTGCTTT+CGG + chr1_4:41305800-41305819 Msa0163300:intron 45.0%
!! TGCATTGGTCCAGTTTGCTA+AGG + chr1_4:41305843-41305862 Msa0163300:intron 45.0%
! AGCAGATAGCCTTAGCAAAC+TGG - chr1_4:41305855-41305874 None:intergenic 45.0%
TTCGTACACTTCAGGCTGTT+TGG - chr1_4:41305912-41305931 None:intergenic 45.0%
AACAGCCTGAAGTGTACGAA+TGG + chr1_4:41305912-41305931 Msa0163300:CDS 45.0%
ACATGAAGGAGCAAGAACAG+AGG - chr1_4:41306072-41306091 None:intergenic 45.0%
CAATGCATGTAAGTGCAAGC+AGG - chr1_4:41306190-41306209 None:intergenic 45.0%
TGCAATTGCTAAACTTGGCC+CGG + chr1_4:41306211-41306230 Msa0163300:CDS 45.0%
! GTGAGCAAGAAACTTTTGCC+GGG - chr1_4:41306232-41306251 None:intergenic 45.0%
!! TCCATGAGCACTGAGATAAC+TGG + chr1_4:41306260-41306279 Msa0163300:CDS 45.0%
ACCAGTTATCTCAGTGCTCA+TGG - chr1_4:41306264-41306283 None:intergenic 45.0%
! TGGTAGTTTGATGGACATGC+TGG + chr1_4:41306280-41306299 Msa0163300:CDS 45.0%
! AGTTTGATGGACATGCTGGT+TGG + chr1_4:41306284-41306303 Msa0163300:CDS 45.0%
!!! CTGTGGTTTTGGCACTAAAC+CGG + chr1_4:41306553-41306572 Msa0163300:intron 45.0%
! ACTAAGTGAGGTTGGCTACA+TGG - chr1_4:41306811-41306830 None:intergenic 45.0%
ATGTAGCCAACCTCACTTAG+TGG + chr1_4:41306810-41306829 Msa0163300:intron 45.0%
TGTAGCCAACCTCACTTAGT+GGG + chr1_4:41306811-41306830 Msa0163300:intron 45.0%
! TGTTACCATGGTGCAGGTTT+TGG + chr1_4:41307102-41307121 Msa0163300:intron 45.0%
!!! GCAGGTTTTGGAGAAGGATT+TGG + chr1_4:41307114-41307133 Msa0163300:intron 45.0%
CTGGTGATTCCCGGATAAAA+AGG - chr1_4:41307704-41307723 None:intergenic 45.0%
TTTGTGATGCTGGTGATTCC+CGG - chr1_4:41307713-41307732 None:intergenic 45.0%
CATGGGCATAGTAAACCAGA+AGG + chr1_4:41307740-41307759 Msa0163300:CDS 45.0%
CAGCTGAATTTCTGTCCAGA+GGG + chr1_4:41307870-41307889 Msa0163300:CDS 45.0%
!! CAACAAGTTGATGGAGTGCA+TGG + chr1_4:41307983-41308002 Msa0163300:CDS 45.0%
ATGGAGTGCATGGATGAACT+TGG + chr1_4:41307993-41308012 Msa0163300:CDS 45.0%
TGGAGTGCATGGATGAACTT+GGG + chr1_4:41307994-41308013 Msa0163300:CDS 45.0%
! ATGGCTGCTATTGACTACAC+AGG - chr1_4:41308222-41308241 None:intergenic 45.0%
GTTATTTGGCTGTTGTTGGC+GGG - chr1_4:41308308-41308327 None:intergenic 45.0%
CAGCCAAATAACAGCTGTAG+TGG + chr1_4:41308316-41308335 Msa0163300:intron 45.0%
! CATGAATGCCAATTTTGGGC+TGG - chr1_4:41308367-41308386 None:intergenic 45.0%
CAGCCCAAAATTGGCATTCA+TGG + chr1_4:41308365-41308384 Msa0163300:intron 45.0%
GTCCCAAGAGTTGAATCTAG+AGG + chr1_4:41308666-41308685 Msa0163300:intron 45.0%
GCCAGAGTCACATATTAGAG+AGG - chr1_4:41308835-41308854 None:intergenic 45.0%
! CTTTTTCTACCAGAGAGCCA+CGG + chr1_4:41308974-41308993 Msa0163300:intron 45.0%
! CATGTGTCAAGCTCTAGTTC+TGG + chr1_4:41309550-41309569 Msa0163300:CDS 45.0%
!! GTCAAGCTCTAGTTCTGGAA+AGG + chr1_4:41309555-41309574 Msa0163300:CDS 45.0%
GAAAGAAGCTGAATTCCTGG+AGG + chr1_4:41309627-41309646 Msa0163300:CDS 45.0%
! GCAGAGAATCAGCTTTTGCT+CGG - chr1_4:41309660-41309679 None:intergenic 45.0%
GGAATTGGTAAAGGAGGTTG+TGG - chr1_4:41309714-41309733 None:intergenic 45.0%
CAACCTCCTTTACCAATTCC+TGG + chr1_4:41309714-41309733 Msa0163300:intron 45.0%
AAGAAGGAGAAACGCGAAAG+AGG - chr1_4:41309781-41309800 None:intergenic 45.0%
TGGCCCCTAAATGGCAATTA+AGG + chr1_4:41310046-41310065 Msa0163300:intron 45.0%
GTCAATGAAGGCTGTCAAAG+TGG - chr1_4:41310113-41310132 None:intergenic 45.0%
! TTGACACTGAGCTCCCATTT+TGG + chr1_4:41310128-41310147 Msa0163300:intron 45.0%
TTCGGGGAACAAATGCAAGA+GGG - chr1_4:41310421-41310440 None:intergenic 45.0%
TGAATGCACCTGAAATGCCA+TGG - chr1_4:41310550-41310569 None:intergenic 45.0%
GAGGAGGACAGGTTTATGAA+AGG + chr1_4:41310783-41310802 Msa0163300:CDS 45.0%
TAAAGGTGGACAGGAGCAAA+AGG + chr1_4:41310829-41310848 Msa0163300:CDS 45.0%
CATACATGAGCATCCACATC+AGG - chr1_4:41311049-41311068 None:intergenic 45.0%
TGCCACTATAGCAGCTAAAG+CGG - chr1_4:41311406-41311425 None:intergenic 45.0%
TAGCTGCTATAGTGGCATAG+TGG + chr1_4:41311409-41311428 Msa0163300:intron 45.0%
GTGACCGCTATTTGTCATAC+TGG + chr1_4:41311783-41311802 Msa0163300:intron 45.0%
TGTCACATAGTAGTCAACCC+CGG - chr1_4:41311853-41311872 None:intergenic 45.0%
GTTAGTGGTGTGCTTTAGTC+AGG + chr1_4:41311981-41312000 Msa0163300:intron 45.0%
GCTTTAGTCAGGATAGTTGC+TGG + chr1_4:41311992-41312011 Msa0163300:intron 45.0%
! GTTGCTGGTTAGTTACGAAC+TGG + chr1_4:41312007-41312026 Msa0163300:intron 45.0%
! AGTTTTCTTGTTGAGGTGGG+GGG - chr1_4:41312155-41312174 None:intergenic 45.0%
! CAGTTTTCTTGTTGAGGTGG+GGG - chr1_4:41312156-41312175 None:intergenic 45.0%
! CCAGTTTTCTTGTTGAGGTG+GGG - chr1_4:41312157-41312176 None:intergenic 45.0%
! CCGCCACTTTACGAATAATG+AGG - chr1_4:41312195-41312214 None:intergenic 45.0%
!! GGACTTGCTATCTTGTTTGC+AGG + chr1_4:41312419-41312438 Msa0163300:intron 45.0%
AACAGCCTGCACCAAATGTA+GGG + chr1_4:41312454-41312473 Msa0163300:CDS 45.0%
CTGACTGATAGGCACTTCTT+TGG - chr1_4:41312557-41312576 None:intergenic 45.0%
TTAGGATGAGACAGCGTAGT+AGG - chr1_4:41312682-41312701 None:intergenic 45.0%
!! TATTGATGTTGGTGCTGCCT+CGG + chr1_4:41313394-41313413 Msa0163300:CDS 45.0%
AGGTGATGAATTGACCGAGA+AGG + chr1_4:41313439-41313458 Msa0163300:CDS 45.0%
GAACTCAGGATAGTCATGTG+TGG - chr1_4:41313882-41313901 None:intergenic 45.0%
!! GCTTTGTTTGCGAGTTTGGA+GGG + chr1_4:41313962-41313981 Msa0163300:intron 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG + chr1_4:41313963-41313982 Msa0163300:intron 45.0%
AGGGGAGGGTTTGGAAAAAA+AGG + chr1_4:41313991-41314010 Msa0163300:intron 45.0%
TCAGAGATATGTACCATCCC+TGG + chr1_4:41314473-41314492 Msa0163300:CDS 45.0%
! CTTTCTGGTGCATAAGTGGA+TGG - chr1_4:41314611-41314630 None:intergenic 45.0%
CATCCACTTATGCACCAGAA+AGG + chr1_4:41314609-41314628 Msa0163300:CDS 45.0%
! CAACCTTTCTGGTGCATAAG+TGG - chr1_4:41314615-41314634 None:intergenic 45.0%
CACTTATGCACCAGAAAGGT+TGG + chr1_4:41314613-41314632 Msa0163300:CDS 45.0%
CTCAAGAGATCCAACCTTTC+TGG - chr1_4:41314626-41314645 None:intergenic 45.0%
CAGAAAGGTTGGATCTCTTG+AGG + chr1_4:41314624-41314643 Msa0163300:CDS 45.0%
CTGGTTCCCGATATTTGGAA+GGG + chr1_4:41314940-41314959 Msa0163300:three_prime_UTR 45.0%
TGGTCACCCTTCCAAATATC+GGG - chr1_4:41314949-41314968 Msa0163310:CDS 45.0%
AATGGCACATGGAATGAAGG+AGG - chr1_4:41315131-41315150 Msa0163310:CDS 45.0%
AGGAATGGCACATGGAATGA+AGG - chr1_4:41315134-41315153 Msa0163310:intron 45.0%
GAAATTGCAGGAATGGCACA+TGG - chr1_4:41315142-41315161 Msa0163310:intron 45.0%
!! TATTTACAAATATATATTAT+AGG + chr1_4:41301935-41301954 Msa0163300:intron 5.0%
!! ATTAAATTTAAAAAGATAAT+AGG - chr1_4:41309156-41309175 None:intergenic 5.0%
TAGAGAAGGAAGAGGTTGCG+TGG - chr1_4:41300105-41300124 None:intergenic 50.0%
GACGGTGAGATTGGTACACT+CGG + chr1_4:41300359-41300378 Msa0163300:intron 50.0%
ACGGTGAGATTGGTACACTC+GGG + chr1_4:41300360-41300379 Msa0163300:intron 50.0%
GTACACTCGGGTAGTTGTAC+CGG + chr1_4:41300372-41300391 Msa0163300:intron 50.0%
AATCGTCATCACGTGGATCC+TGG + chr1_4:41302926-41302945 Msa0163300:CDS 50.0%
TGACAATGCCTTCACCCATG+CGG - chr1_4:41302983-41303002 None:intergenic 50.0%
!! GGTGAAGGCATTGTCATGTC+AGG + chr1_4:41302987-41303006 Msa0163300:CDS 50.0%
! GGAAGCAGAAGCGCAATAAC+TGG + chr1_4:41304468-41304487 Msa0163300:intron 50.0%
AACAAAGCAGAGGGTTAGGG+AGG + chr1_4:41304576-41304595 Msa0163300:intron 50.0%
CAGAAGTGGTAGACTCAACG+TGG + chr1_4:41304616-41304635 Msa0163300:intron 50.0%
! CAGAGTCAGGCAAGTTTTGC+CGG + chr1_4:41304677-41304696 Msa0163300:intron 50.0%
! AGAGTCAGGCAAGTTTTGCC+GGG + chr1_4:41304678-41304697 Msa0163300:intron 50.0%
ACAAAGGACGTCACTACAGC+TGG - chr1_4:41305956-41305975 None:intergenic 50.0%
GCTGCAGCAGGCTATTGATA+AGG + chr1_4:41306463-41306482 Msa0163300:CDS 50.0%
TGGCACTAAACCGGTGATGT+TGG + chr1_4:41306562-41306581 Msa0163300:intron 50.0%
CTCATCCCACTAAGTGAGGT+TGG - chr1_4:41306819-41306838 None:intergenic 50.0%
CAACCTCACTTAGTGGGATG+AGG + chr1_4:41306817-41306836 Msa0163300:intron 50.0%
ATGCCTCATCCCACTAAGTG+AGG - chr1_4:41306823-41306842 None:intergenic 50.0%
TCACTTAGTGGGATGAGGCA+TGG + chr1_4:41306822-41306841 Msa0163300:intron 50.0%
CTTCTCCAAAACCTGCACCA+TGG - chr1_4:41307110-41307129 None:intergenic 50.0%
!!! CATGGTGCAGGTTTTGGAGA+AGG + chr1_4:41307108-41307127 Msa0163300:intron 50.0%
CCTAGCAGTACAACTAGCAC+AGG - chr1_4:41307327-41307346 None:intergenic 50.0%
CCTGTGCTAGTTGTACTGCT+AGG + chr1_4:41307324-41307343 Msa0163300:CDS 50.0%
TCTGCATTTGGAGGACCTTC+TGG - chr1_4:41307758-41307777 None:intergenic 50.0%
GTCACTGCTTCTGCATTTGG+AGG - chr1_4:41307767-41307786 None:intergenic 50.0%
TGGGTCACTGCTTCTGCATT+TGG - chr1_4:41307770-41307789 None:intergenic 50.0%
GCAGCTGAATTTCTGTCCAG+AGG + chr1_4:41307869-41307888 Msa0163300:CDS 50.0%
GCATTGCTCTAGTTACCCTC+TGG - chr1_4:41307888-41307907 None:intergenic 50.0%
TGGGATTTCACATAGCGCCT+AGG - chr1_4:41308255-41308274 None:intergenic 50.0%
!!! TTTTTTCTGCCGTGGCTCTC+TGG - chr1_4:41308986-41309005 None:intergenic 50.0%
GAAAGCAGCCTGTTCTGACT+TGG + chr1_4:41309585-41309604 Msa0163300:CDS 50.0%
TGGGAGCTCAGTGTCAATGA+AGG - chr1_4:41310125-41310144 None:intergenic 50.0%
GTTCGGGGAACAAATGCAAG+AGG - chr1_4:41310422-41310441 None:intergenic 50.0%
GATCAAACCATCACACCGGT+TGG + chr1_4:41310759-41310778 Msa0163300:CDS 50.0%
TGAGCATCCACATCAGGTTC+CGG - chr1_4:41311043-41311062 None:intergenic 50.0%
GGCACCATAGTAGTCAACAG+CGG + chr1_4:41311295-41311314 Msa0163300:intron 50.0%
CGCTACGACGATTACCATAG+CGG - chr1_4:41311364-41311383 None:intergenic 50.0%
CGCTATGGTAATCGTCGTAG+CGG + chr1_4:41311362-41311381 Msa0163300:intron 50.0%
GCTATAGTGGCATAGTGGTG+CGG + chr1_4:41311414-41311433 Msa0163300:intron 50.0%
!! AAGAGTGTGTTTTGCGGCAC+AGG - chr1_4:41311543-41311562 None:intergenic 50.0%
!! TGCTATTCCACCTTTGGGGT+CGG + chr1_4:41311810-41311829 Msa0163300:intron 50.0%
TAGTAGTCAACCCCGGATAG+CGG - chr1_4:41311846-41311865 None:intergenic 50.0%
! GTTTTCTTGTTGAGGTGGGG+GGG - chr1_4:41312154-41312173 None:intergenic 50.0%
CCCCACCTCAACAAGAAAAC+TGG + chr1_4:41312154-41312173 Msa0163300:intron 50.0%
GAACAGCCTGCACCAAATGT+AGG + chr1_4:41312453-41312472 Msa0163300:CDS 50.0%
ACAGCCTGCACCAAATGTAG+GGG + chr1_4:41312455-41312474 Msa0163300:CDS 50.0%
!! ACAACCCCTACATTTGGTGC+AGG - chr1_4:41312462-41312481 None:intergenic 50.0%
TGCACCAAATGTAGGGGTTG+TGG + chr1_4:41312461-41312480 Msa0163300:CDS 50.0%
TGGTCCACAACCCCTACATT+TGG - chr1_4:41312468-41312487 None:intergenic 50.0%
GCACGTTATAACGGTGATGC+TGG + chr1_4:41313048-41313067 Msa0163300:CDS 50.0%
CGTTATAACGGTGATGCTGG+AGG + chr1_4:41313051-41313070 Msa0163300:CDS 50.0%
!! TGATGCTGGAGGTGTTCAGA+TGG + chr1_4:41313062-41313081 Msa0163300:CDS 50.0%
TGACATTGGTCGGATGATGC+TGG + chr1_4:41313189-41313208 Msa0163300:intron 50.0%
GACATTGGTCGGATGATGCT+GGG + chr1_4:41313190-41313209 Msa0163300:intron 50.0%
!! ATTGATGTTGGTGCTGCCTC+GGG + chr1_4:41313395-41313414 Msa0163300:CDS 50.0%
TAAATGGCTGCGTGATTGGG+TGG + chr1_4:41313829-41313848 Msa0163300:intron 50.0%
AGCTAACTCAGCAAGGCTAG+TGG - chr1_4:41313904-41313923 None:intergenic 50.0%
GTCGATCAGCTAACTCAGCA+AGG - chr1_4:41313911-41313930 None:intergenic 50.0%
!! GGCTTTGTTTGCGAGTTTGG+AGG + chr1_4:41313961-41313980 Msa0163300:intron 50.0%
TTTGCGAGTTTGGAGGGGAT+GGG + chr1_4:41313968-41313987 Msa0163300:intron 50.0%
TTCACACAGGTTACTGCCGT+TGG + chr1_4:41314426-41314445 Msa0163300:intron 50.0%
TCACACAGGTTACTGCCGTT+GGG + chr1_4:41314427-41314446 Msa0163300:intron 50.0%
CAACATTGCTGCATGCCCAA+CGG - chr1_4:41314445-41314464 None:intergenic 50.0%
ATTCCACATGTCTGGCACTC+CGG + chr1_4:41314872-41314891 Msa0163300:three_prime_UTR 50.0%
TGTAGCCACTGGTGTTTACC+CGG - chr1_4:41314894-41314913 Msa0163310:CDS 50.0%
! GCTACAATCCTGAGGAGCAT+CGG + chr1_4:41314908-41314927 Msa0163300:three_prime_UTR 50.0%
!! CTACAATCCTGAGGAGCATC+GGG + chr1_4:41314909-41314928 Msa0163300:three_prime_UTR 50.0%
GGTTCCTGGTTCCCGATATT+TGG + chr1_4:41314935-41314954 Msa0163300:three_prime_UTR 50.0%
CCTTCCAAATATCGGGAACC+AGG - chr1_4:41314942-41314961 Msa0163310:CDS 50.0%
CCTGGTTCCCGATATTTGGA+AGG + chr1_4:41314939-41314958 Msa0163300:three_prime_UTR 50.0%
!! GGATCAGCTTCGAGTTTTGC+AGG + chr1_4:41315071-41315090 Msa0163300:three_prime_UTR 50.0%
!! TTAGCACTGGCGTCAGCTTG+TGG - chr1_4:41302787-41302806 None:intergenic 55.0%
TTGGGGTAGACCAAACCGCA+TGG + chr1_4:41302965-41302984 Msa0163300:CDS 55.0%
TGGGGTAGACCAAACCGCAT+GGG + chr1_4:41302966-41302985 Msa0163300:CDS 55.0%
AGACCAAACCGCATGGGTGA+AGG + chr1_4:41302972-41302991 Msa0163300:CDS 55.0%
ATGCCTTCACCCATGCGGTT+TGG - chr1_4:41302978-41302997 None:intergenic 55.0%
AGAAAGCAAGGGGCAGAGTC+AGG + chr1_4:41304664-41304683 Msa0163300:intron 55.0%
! TCAGGCAAGTTTTGCCGGGA+GGG + chr1_4:41304682-41304701 Msa0163300:intron 55.0%
GCTAAGGCTATCTGCTCCCT+TGG + chr1_4:41305859-41305878 Msa0163300:CDS 55.0%
!! GCTCTAAAAGCTGCAGCTCG+AGG - chr1_4:41306386-41306405 None:intergenic 55.0%
CGTTGAGTGGGGTTCAGAAG+AGG + chr1_4:41306409-41306428 Msa0163300:CDS 55.0%
CAGCCATAGCAGTTGCTCCT+AGG + chr1_4:41308235-41308254 Msa0163300:intron 55.0%
TTGCTCGGAAAGATGCCTCC+AGG - chr1_4:41309645-41309664 None:intergenic 55.0%
! AACCATCACACCGGTTGGTG+AGG + chr1_4:41310764-41310783 Msa0163300:CDS 55.0%
AACCTGTCCTCCTCACCAAC+CGG - chr1_4:41310777-41310796 None:intergenic 55.0%
TCGGGCTTTCTGGGTATAGG+AGG - chr1_4:41311019-41311038 None:intergenic 55.0%
TATACCCAGAAAGCCCGACC+CGG + chr1_4:41311021-41311040 Msa0163300:CDS 55.0%
ATCCACATCAGGTTCCGGGT+CGG - chr1_4:41311038-41311057 None:intergenic 55.0%
GAGCATCCACATCAGGTTCC+GGG - chr1_4:41311042-41311061 None:intergenic 55.0%
! TCGGCCGCTGTTGACTACTA+TGG - chr1_4:41311302-41311321 None:intergenic 55.0%
TAGTCAACAGCGGCCGATAG+CGG + chr1_4:41311305-41311324 Msa0163300:intron 55.0%
TATAGCGGCCGTGCGTATAG+CGG + chr1_4:41311331-41311350 Msa0163300:intron 55.0%
GTTCGTTGCCGCTATACGCA+CGG - chr1_4:41311342-41311361 None:intergenic 55.0%
ATAGCGGCAACGAACCGCTA+TGG + chr1_4:41311347-41311366 Msa0163300:intron 55.0%
AGCGGCGCGGAATCAAATAG+CGG + chr1_4:41311380-41311399 Msa0163300:intron 55.0%
! GGCCGCTTTAGCTGCTATAG+TGG + chr1_4:41311401-41311420 Msa0163300:intron 55.0%
TAGTGGTGCGGAGCGGATAA+CGG + chr1_4:41311426-41311445 Msa0163300:intron 55.0%
! CTGCCTCGGGTTTGGTCAAA+AGG + chr1_4:41313408-41313427 Msa0163300:CDS 55.0%
! GGTCCTTTTGACCAAACCCG+AGG - chr1_4:41313414-41313433 None:intergenic 55.0%
GGCTAGAGCAGGCAGACATA+CGG - chr1_4:41313860-41313879 None:intergenic 55.0%
!! AGTCATGTGTGGGCTAGAGC+AGG - chr1_4:41313871-41313890 None:intergenic 55.0%
CAGCAAGGCTAGTGGAACTC+AGG - chr1_4:41313896-41313915 None:intergenic 55.0%
GTTTGCGAGTTTGGAGGGGA+TGG + chr1_4:41313967-41313986 Msa0163300:intron 55.0%
GTGACCTTTCCACTGTGCCA+AGG + chr1_4:41314089-41314108 Msa0163300:intron 55.0%
TGAGCCTTGGCACAGTGGAA+AGG - chr1_4:41314096-41314115 None:intergenic 55.0%
GATTGTGAGCCTTGGCACAG+TGG - chr1_4:41314101-41314120 None:intergenic 55.0%
CGTTGGGCATGCAGCAATGT+TGG + chr1_4:41314443-41314462 Msa0163300:CDS 55.0%
CAGCTGCGTTCTTCGCTTTC+TGG + chr1_4:41314795-41314814 Msa0163300:three_prime_UTR 55.0%
TTCCACATGTCTGGCACTCC+GGG + chr1_4:41314873-41314892 Msa0163300:three_prime_UTR 55.0%
CACCAGTGGCTACAATCCTG+AGG + chr1_4:41314900-41314919 Msa0163300:three_prime_UTR 55.0%
CTCCTCAGGATTGTAGCCAC+TGG - chr1_4:41314905-41314924 Msa0163310:CDS 55.0%
!! AATCCTGAGGAGCATCGGGT+GGG + chr1_4:41314913-41314932 Msa0163300:three_prime_UTR 55.0%
AACCGTCTGAGCCGCTGAAG+TGG + chr1_4:41300760-41300779 Msa0163300:intron 60.0%
AGCCACTTCAGCGGCTCAGA+CGG - chr1_4:41300765-41300784 None:intergenic 60.0%
GAGGTGGGATCATGCTCCGT+AGG + chr1_4:41300988-41301007 Msa0163300:intron 60.0%
! GTCAGGCAAGTTTTGCCGGG+AGG + chr1_4:41304681-41304700 Msa0163300:intron 60.0%
! CAAACAGTGTCGCTCCCTCC+CGG - chr1_4:41304699-41304718 None:intergenic 60.0%
GGGAGCGACACTGTTTGCGT+AGG + chr1_4:41304702-41304721 Msa0163300:intron 60.0%
GGTTCAGAAGCAGCTGCAGC+AGG + chr1_4:41306451-41306470 Msa0163300:CDS 60.0%
GCGCCTAGGAGCAACTGCTA+TGG - chr1_4:41308241-41308260 None:intergenic 60.0%
CTCCTCACCAACCGGTGTGA+TGG - chr1_4:41310769-41310788 None:intergenic 60.0%
!! CATCACACCGGTTGGTGAGG+AGG + chr1_4:41310767-41310786 Msa0163300:CDS 60.0%
GGGTCGGGCTTTCTGGGTAT+AGG - chr1_4:41311022-41311041 None:intergenic 60.0%
TCCACATCAGGTTCCGGGTC+GGG - chr1_4:41311037-41311056 None:intergenic 60.0%
! GGCCGATAGCGGCACTATAG+CGG + chr1_4:41311316-41311335 Msa0163300:intron 60.0%
! GGCCGCTATAGTGCCGCTAT+CGG - chr1_4:41311321-41311340 None:intergenic 60.0%
TGGTAATCGTCGTAGCGGCG+CGG + chr1_4:41311367-41311386 Msa0163300:intron 60.0%
AGTGGCATAGTGGTGCGGAG+CGG + chr1_4:41311419-41311438 Msa0163300:intron 60.0%
TCTTGTTGAGGTGGGGGGGT+GGG - chr1_4:41312150-41312169 None:intergenic 60.0%
TTCTTGTTGAGGTGGGGGGG+TGG - chr1_4:41312151-41312170 None:intergenic 60.0%
!! TGTTGGTGCTGCCTCGGGTT+TGG + chr1_4:41313400-41313419 Msa0163300:CDS 60.0%
CGAGTTTGGAGGGGATGGGA+GGG + chr1_4:41313972-41313991 Msa0163300:intron 60.0%
GAGTTTGGAGGGGATGGGAG+GGG + chr1_4:41313973-41313992 Msa0163300:intron 60.0%
! TACCCGGAGTGCCAGACATG+TGG - chr1_4:41314878-41314897 Msa0163310:CDS 60.0%
GCACTCCGGGTAAACACCAG+TGG + chr1_4:41314886-41314905 Msa0163300:three_prime_UTR 60.0%
!! CAATCCTGAGGAGCATCGGG+TGG + chr1_4:41314912-41314931 Msa0163300:three_prime_UTR 60.0%
!! ATCCTGAGGAGCATCGGGTG+GGG + chr1_4:41314914-41314933 Msa0163300:three_prime_UTR 60.0%
!! CACCGGTTGGTGAGGAGGAC+AGG + chr1_4:41310772-41310791 Msa0163300:CDS 65.0%
GGTTCCGGGTCGGGCTTTCT+GGG - chr1_4:41311028-41311047 None:intergenic 65.0%
AGGTTCCGGGTCGGGCTTTC+TGG - chr1_4:41311029-41311048 None:intergenic 65.0%
TTCGTAGCGGCCGACCCCAA+AGG - chr1_4:41311823-41311842 None:intergenic 65.0%
GGCCGCTACGAACCGCTATC+CGG + chr1_4:41311831-41311850 Msa0163300:intron 65.0%
GCCGCTACGAACCGCTATCC+GGG + chr1_4:41311832-41311851 Msa0163300:intron 65.0%
! CCCCGGATAGCGGTTCGTAG+CGG - chr1_4:41311836-41311855 None:intergenic 65.0%
CCGCTACGAACCGCTATCCG+GGG + chr1_4:41311833-41311852 Msa0163300:intron 65.0%
GCGAGTTTGGAGGGGATGGG+AGG + chr1_4:41313971-41313990 Msa0163300:intron 65.0%
TTTGGAGGGGATGGGAGGGG+AGG + chr1_4:41313976-41313995 Msa0163300:intron 65.0%
TTGGAGGGGATGGGAGGGGA+GGG + chr1_4:41313977-41313996 Msa0163300:intron 65.0%
AACCCCACCCGATGCTCCTC+AGG - chr1_4:41314919-41314938 Msa0163310:CDS 65.0%
GCCCGACCCGGAACCTGATG+TGG + chr1_4:41311033-41311052 Msa0163300:CDS 70.0%
GTAGCGGCCGACCCCAAAGG+TGG - chr1_4:41311820-41311839 None:intergenic 70.0%
GTTGAGGTGGGGGGGTGGGA+GGG - chr1_4:41312146-41312165 None:intergenic 70.0%
TGTTGAGGTGGGGGGGTGGG+AGG - chr1_4:41312147-41312166 None:intergenic 70.0%
GGGGATGGGAGGGGAGGGTT+TGG + chr1_4:41313982-41314001 Msa0163300:intron 70.0%
!! GGAGCATCGGGTGGGGTTCC+TGG + chr1_4:41314921-41314940 Msa0163300:three_prime_UTR 70.0%
AGGTGGGGGGGTGGGAGGGA+GGG - chr1_4:41312142-41312161 None:intergenic 75.0%
! GAGGTGGGGGGGTGGGAGGG+AGG - chr1_4:41312143-41312162 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 41300062 41315513 41300062 ID=Msa0163300;Name=Msa0163300
chr1_4 mRNA 41300062 41315513 41300062 ID=Msa0163300-mRNA-1;Parent=Msa0163300;Name=Msa0163300-mRNA-1;_AED=0.09;_eAED=0.09;_QI=153|0.88|0.94|0.94|0.94|0.94|19|789|926
chr1_4 exon 41300062 41300258 41300062 ID=Msa0163300-mRNA-1:exon:11889;Parent=Msa0163300-mRNA-1
chr1_4 exon 41302534 41303008 41302534 ID=Msa0163300-mRNA-1:exon:11890;Parent=Msa0163300-mRNA-1
chr1_4 exon 41305205 41305296 41305205 ID=Msa0163300-mRNA-1:exon:11891;Parent=Msa0163300-mRNA-1
chr1_4 exon 41305856 41306020 41305856 ID=Msa0163300-mRNA-1:exon:11892;Parent=Msa0163300-mRNA-1
chr1_4 exon 41306139 41306526 41306139 ID=Msa0163300-mRNA-1:exon:11893;Parent=Msa0163300-mRNA-1
chr1_4 exon 41307118 41307236 41307118 ID=Msa0163300-mRNA-1:exon:11894;Parent=Msa0163300-mRNA-1
chr1_4 exon 41307323 41307382 41307323 ID=Msa0163300-mRNA-1:exon:11895;Parent=Msa0163300-mRNA-1
chr1_4 exon 41307518 41307590 41307518 ID=Msa0163300-mRNA-1:exon:11896;Parent=Msa0163300-mRNA-1
chr1_4 exon 41307674 41307891 41307674 ID=Msa0163300-mRNA-1:exon:11897;Parent=Msa0163300-mRNA-1
chr1_4 exon 41307980 41308024 41307980 ID=Msa0163300-mRNA-1:exon:11898;Parent=Msa0163300-mRNA-1
chr1_4 exon 41309180 41309273 41309180 ID=Msa0163300-mRNA-1:exon:11899;Parent=Msa0163300-mRNA-1
chr1_4 exon 41309493 41309684 41309493 ID=Msa0163300-mRNA-1:exon:11900;Parent=Msa0163300-mRNA-1
chr1_4 exon 41310747 41310850 41310747 ID=Msa0163300-mRNA-1:exon:11901;Parent=Msa0163300-mRNA-1
chr1_4 exon 41310976 41311063 41310976 ID=Msa0163300-mRNA-1:exon:11902;Parent=Msa0163300-mRNA-1
chr1_4 exon 41312441 41312587 41312441 ID=Msa0163300-mRNA-1:exon:11903;Parent=Msa0163300-mRNA-1
chr1_4 exon 41313024 41313149 41313024 ID=Msa0163300-mRNA-1:exon:11904;Parent=Msa0163300-mRNA-1
chr1_4 exon 41313365 41313535 41313365 ID=Msa0163300-mRNA-1:exon:11905;Parent=Msa0163300-mRNA-1
chr1_4 exon 41314435 41314494 41314435 ID=Msa0163300-mRNA-1:exon:11906;Parent=Msa0163300-mRNA-1
chr1_4 exon 41314605 41315513 41314605 ID=Msa0163300-mRNA-1:exon:11907;Parent=Msa0163300-mRNA-1
chr1_4 five_prime_UTR 41300062 41300214 41300062 ID=Msa0163300-mRNA-1:five_prime_utr;Parent=Msa0163300-mRNA-1
chr1_4 CDS 41300215 41300258 41300215 ID=Msa0163300-mRNA-1:cds;Parent=Msa0163300-mRNA-1
chr1_4 CDS 41302534 41303008 41302534 ID=Msa0163300-mRNA-1:cds;Parent=Msa0163300-mRNA-1
chr1_4 CDS 41305205 41305296 41305205 ID=Msa0163300-mRNA-1:cds;Parent=Msa0163300-mRNA-1
chr1_4 CDS 41305856 41306020 41305856 ID=Msa0163300-mRNA-1:cds;Parent=Msa0163300-mRNA-1
chr1_4 CDS 41306139 41306526 41306139 ID=Msa0163300-mRNA-1:cds;Parent=Msa0163300-mRNA-1
chr1_4 CDS 41307118 41307236 41307118 ID=Msa0163300-mRNA-1:cds;Parent=Msa0163300-mRNA-1
chr1_4 CDS 41307323 41307382 41307323 ID=Msa0163300-mRNA-1:cds;Parent=Msa0163300-mRNA-1
chr1_4 CDS 41307518 41307590 41307518 ID=Msa0163300-mRNA-1:cds;Parent=Msa0163300-mRNA-1
chr1_4 CDS 41307674 41307891 41307674 ID=Msa0163300-mRNA-1:cds;Parent=Msa0163300-mRNA-1
chr1_4 CDS 41307980 41308024 41307980 ID=Msa0163300-mRNA-1:cds;Parent=Msa0163300-mRNA-1
chr1_4 CDS 41309180 41309273 41309180 ID=Msa0163300-mRNA-1:cds;Parent=Msa0163300-mRNA-1
chr1_4 CDS 41309493 41309684 41309493 ID=Msa0163300-mRNA-1:cds;Parent=Msa0163300-mRNA-1
chr1_4 CDS 41310747 41310850 41310747 ID=Msa0163300-mRNA-1:cds;Parent=Msa0163300-mRNA-1
chr1_4 CDS 41310976 41311063 41310976 ID=Msa0163300-mRNA-1:cds;Parent=Msa0163300-mRNA-1
chr1_4 CDS 41312441 41312587 41312441 ID=Msa0163300-mRNA-1:cds;Parent=Msa0163300-mRNA-1
chr1_4 CDS 41313024 41313149 41313024 ID=Msa0163300-mRNA-1:cds;Parent=Msa0163300-mRNA-1
chr1_4 CDS 41313365 41313535 41313365 ID=Msa0163300-mRNA-1:cds;Parent=Msa0163300-mRNA-1
chr1_4 CDS 41314435 41314494 41314435 ID=Msa0163300-mRNA-1:cds;Parent=Msa0163300-mRNA-1
chr1_4 CDS 41314605 41314724 41314605 ID=Msa0163300-mRNA-1:cds;Parent=Msa0163300-mRNA-1
chr1_4 three_prime_UTR 41314725 41315513 41314725 ID=Msa0163300-mRNA-1:three_prime_utr;Parent=Msa0163300-mRNA-1
Gene Sequence

>Msa0163300

ATGGCAGTTAAATCTCATAGCACCAATAATTTTCTTCCGTTAAGCTCCTCAAATTGCTGCCTTTCGAATGGTTCCTCTAGTGTAGGGAGAAAAGTGTCGGACTTGCATTGCCTACTATTTAGTAAATGGGGCAGTTCAAGAAAGGGATGCCTTATACAACATGATTTGTCTTTGAGCAGTGGTCAAGGTTCTGTGAGCTGTAGAAAACACTATTTTACGTTTTCTAAGGCGGGAAGGAGTGTAAATTTGCTTCCATTTGCTACCTCTGATGATGGTATGACTGTCAACGGGAGTCCACAAGCTGACGCCAGTGCTAACCTTGAAAAAATGAGGGTGAAATTGAATAGCTCTCTTGAAGATGAAGACTTTTATGATGGACTTGTTCAAGCTTTATATGATGCAGCCAGGGTTTTTGAGCTAGCAATTAAAGACCATAAATCGTCATCACGTGGATCCTGGTTTTCAACAGCTTGGCTTGGGGTAGACCAAACCGCATGGGTGAAGGCATTGTCATGTCAGGCCGCCGTGTACTCCTTATTATATGCTGCAAGTGAAATTTCATCCCGAGATGATAGCAGAGATAGAAATGTCAATGTATTTGTTCAAAGGAGTTTGCTAAGGCTATCTGCTCCCTTGGAGAGCTTAATCAGAGAAAACTTATCTGCCAAACAGCCTGAAGTGTACGAATGGTTTTGGTCTGAGCAAGTTCCAGCTGTAGTGACGTCCTTTGTTAATAAGTTTGAAGGGGACGGGCGCTTCACTTCTGCCATTGCTTTGTCTGAAAAAACTAAGGGTTTGAGCAGTGCAAGTGATGTATCACTTCTCCTGCTTGCACTTACATGCATTGCTGCAATTGCTAAACTTGGCCCGGCAAAAGTTTCTTGCTCACAATTCTTTTCCATGAGCACTGAGATAACTGGTAGTTTGATGGACATGCTGGTTGGTTTAATTCCTGTAAGTCAAGCTTATAATTCTATAAAGGATGTTGGTCTGCACAGAGAATTTCTTGTACATTTTGGTCCTCGAGCTGCAGCTTTTAGAGCAAACGTTGAGTGGGGTTCAGAAGAGGTTATTTTCTGGGTAAATCTGGTTCAGAAGCAGCTGCAGCAGGCTATTGATAAGGAGAAAATATGGTCAAGACTGACAACATCTGAAAGCATTGAGGTTTTGGAGAAGGATTTGGCTATATTTGGATTCTTTATTGCTTTAGGAAGAAGTACACGAACATTTCTTTTGGCAAATGGTTTCGATGGTCCCGATGATCCAATTGAAGATTTCATCAGGCCTGTGCTAGTTGTACTGCTAGGATTTGGTCAGATGATTGTATATATAGGTGTTTTAAGGTATCTTATTGGGGGAAGTGTTTTATACTACCCACAACTCTCATCCATTAGTTCATATCAATTGTATGTTGAGGTAGTTTGTGAAGAGCTGGATTGGCTTCCTTTTTATCCGGGAATCACCAGCATCACAAAACAGTCTCATGGGCATAGTAAACCAGAAGGTCCTCCAAATGCAGAAGCAGTGACCCAAGCATTTGCTGTTTGCTCTTATTGGATGCAGAGCTTTATTAAATACAGCACATGGCTTGAGAGTCCTTCAAATGTAAAAGCAGCTGAATTTCTGTCCAGAGGGCACAACAAGTTGATGGAGTGCATGGATGAACTTGGGATGATAAAAGATAAGACATTGGAGACTGATGCCAAGAAAATAGTTGACGGGCAAAGATCCACAATTCAGTCAACGATAAAAGACTCAGGTTCTTTTGATGAGGCATTAAAAAGTGTCGAAGAAGCTGTGATAAAGCTTGAAAAGTTGCTTCAAGAATTGCATGTGTCAAGCTCTAGTTCTGGAAAGGAGCATTTGAAAGCAGCCTGTTCTGACTTGGAAAAAATACGGAAACTTAAGAAAGAAGCTGAATTCCTGGAGGCATCTTTCCGAGCAAAAGCTGATTCTCTGCAAGAGGGAGTTAATAGTGATCAAACCATCACACCGGTTGGTGAGGAGGACAGGTTTATGAAAGGGAAAAGCAGAAAGAATGACAATGTAAAGGTGGACAGGAGCAAAAGACAAATTGGAAAATCTCGTGGATTCTGGAGCATATTTGTACCTCCTATACCCAGAAAGCCCGACCCGGAACCTGATGTGGATGCTCATGAAAATTATATTGAACAGCCTGCACCAAATGTAGGGGTTGTGGACCAAGAACCCAATGAAATCCTTCGCTTTGAGCTTCTAAGAAATGAGCTGATGGAACTTGAGAAAAGGGTCCAAAGAAGTGCCTATCAGTCAGAAAATAATGAGGATTTGATGATCAGTGATGATGGTGCACGTTATAACGGTGATGCTGGAGGTGTTCAGATGGTCAGAGTTCAGAAGAATGAAAATTTCATACAGAAATCTTTTGACAAACTAAAAGAAACGGGAACGGATGTCTTGCAAGGAACTCAACTTCTTGCTATTGATGTTGGTGCTGCCTCGGGTTTGGTCAAAAGGACCTTAATAGGTGATGAATTGACCGAGAAGGAGAAGAAAGCACTTAAAAGAACCTTAACTGACATGGCTTCAGTTGTTCCTATCGGCATTTTAATGCTTCTTCCTGTTACTGCCGTTGGGCATGCAGCAATGTTGGCTGCCATTCAGAGATATGTACCATCCCTGATTCCATCCACTTATGCACCAGAAAGGTTGGATCTCTTGAGGCAGCTTGAGAAAGTGAAGCAAATGTCAATGTCAACCAGTGATGTAGATTCAGATGATGAAATGGATGAAGTTAAATGA
Protein sequence

>Msa0163300

MAVKSHSTNNFLPLSSSNCCLSNGSSSVGRKVSDLHCLLFSKWGSSRKGCLIQHDLSLSSGQGSVSCRKHYFTFSKAGRSVNLLPFATSDDGMTVNGSPQADASANLEKMRVKLNSSLEDEDFYDGLVQALYDAARVFELAIKDHKSSSRGSWFSTAWLGVDQTAWVKALSCQAAVYSLLYAASEISSRDDSRDRNVNVFVQRSLLRLSAPLESLIRENLSAKQPEVYEWFWSEQVPAVVTSFVNKFEGDGRFTSAIALSEKTKGLSSASDVSLLLLALTCIAAIAKLGPAKVSCSQFFSMSTEITGSLMDMLVGLIPVSQAYNSIKDVGLHREFLVHFGPRAAAFRANVEWGSEEVIFWVNLVQKQLQQAIDKEKIWSRLTTSESIEVLEKDLAIFGFFIALGRSTRTFLLANGFDGPDDPIEDFIRPVLVVLLGFGQMIVYIGVLRYLIGGSVLYYPQLSSISSYQLYVEVVCEELDWLPFYPGITSITKQSHGHSKPEGPPNAEAVTQAFAVCSYWMQSFIKYSTWLESPSNVKAAEFLSRGHNKLMECMDELGMIKDKTLETDAKKIVDGQRSTIQSTIKDSGSFDEALKSVEEAVIKLEKLLQELHVSSSSSGKEHLKAACSDLEKIRKLKKEAEFLEASFRAKADSLQEGVNSDQTITPVGEEDRFMKGKSRKNDNVKVDRSKRQIGKSRGFWSIFVPPIPRKPDPEPDVDAHENYIEQPAPNVGVVDQEPNEILRFELLRNELMELEKRVQRSAYQSENNEDLMISDDGARYNGDAGGVQMVRVQKNENFIQKSFDKLKETGTDVLQGTQLLAIDVGAASGLVKRTLIGDELTEKEKKALKRTLTDMASVVPIGILMLLPVTAVGHAAMLAAIQRYVPSLIPSTYAPERLDLLRQLEKVKQMSMSTSDVDSDDEMDEVK*