AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0807950


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0807950 MtrunA17_Chr5g0422781 77.396 407 15 4 1 399 1 338 0.0 603
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0807950 AT3G25805.1 51.392 395 114 6 7 395 6 328 1.02e-128 374

Find 106 sgRNAs with CRISPR-Local

Find 281 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTCCTCTTGTTGGACTTAT+TGG 0.159460 5_3:-31436161 Msa0807950:CDS
CAGCCATACCATTATGTAAT+TGG 0.196394 5_3:-31438379 Msa0807950:CDS
TGTGCCGGTTGTTGGCTTAA+TGG 0.264612 5_3:-31435904 Msa0807950:CDS
GGTCGAATGGATGCAAATTT+TGG 0.266469 5_3:-31436098 Msa0807950:CDS
TTTGACAGGGAGATCCATTA+TGG 0.287408 5_3:-31438236 Msa0807950:intron
AGGGGTCTCTTGACGTACTA+TGG 0.291879 5_3:-31436980 Msa0807950:CDS
AGTAATCAATTGACCTCTTT+AGG 0.299317 5_3:+31435861 None:intergenic
AAGAGGGAGATGAGAATCTA+AGG 0.321686 5_3:-31439541 Msa0807950:CDS
TGCAGAAGAGAGTGAATTGA+TGG 0.323703 5_3:+31439649 None:intergenic
GGAGCACAAGTGGGTTCTTC+TGG 0.326739 5_3:+31439604 None:intergenic
TTTGAATGATACATTTAATC+TGG 0.332463 5_3:+31435545 None:intergenic
ACAGAATGTTCAGCAAAATA+AGG 0.336442 5_3:-31435952 Msa0807950:CDS
AATGGCTTATCTTCTTTGCT+TGG 0.344831 5_3:-31435886 Msa0807950:CDS
CAAGTGGGTTCTTCTGGAAT+TGG 0.345819 5_3:+31439610 None:intergenic
CTTAGATATGTGCCGGTTGT+TGG 0.346524 5_3:-31435912 Msa0807950:CDS
TTCCCTGGCCAATTACATAA+TGG 0.356146 5_3:+31438371 None:intergenic
ATTCTCATCTCCCTCTTTCT+CGG 0.359762 5_3:+31439547 None:intergenic
GAGTACTTGGTTGGTTATCT+TGG 0.361713 5_3:-31436056 Msa0807950:CDS
TACGATCTGTGAACAGTAAA+GGG 0.363648 5_3:+31437018 None:intergenic
GGCTGGCTTACGCCTTCATA+TGG 0.364527 5_3:-31436025 Msa0807950:CDS
GGACTATTCAACTTTGTGAT+TGG 0.372455 5_3:-31437059 Msa0807950:CDS
TTGATGGAGCTGAAAGGTTT+TGG 0.375437 5_3:+31439665 None:intergenic
ATCTTGCCATTCGTGAATCT+TGG 0.380027 5_3:-31438156 Msa0807950:intron
CATCGTTGGCATTATTCATT+CGG 0.385219 5_3:+31436234 None:intergenic
ACACTTACAGGATGAAGAAC+TGG 0.392869 5_3:+31437180 None:intergenic
TCTGAACTGATAGCCCATAA+TGG 0.399489 5_3:+31438222 None:intergenic
CCCAAATAAAAGACTGAACT+TGG 0.400044 5_3:-31437735 Msa0807950:intron
TATTCAACTTTGTGATTGGA+TGG 0.402697 5_3:-31437055 Msa0807950:CDS
TTCATTCGGATAGCCATGTA+TGG 0.404808 5_3:+31436248 None:intergenic
CCCCGGATGAGGGATTTGTT+TGG 0.406834 5_3:-31435632 Msa0807950:three_prime_UTR
CTCTTGTTGGACTTATTGGC+GGG 0.411567 5_3:-31436157 Msa0807950:CDS
AATCGATACACGAAACTGTT+TGG 0.411701 5_3:+31435794 None:intergenic
CTTGGTTGGTTATCTTGGTT+CGG 0.412175 5_3:-31436051 Msa0807950:CDS
ATCCAAACAAATCCCTCATC+CGG 0.413669 5_3:+31435630 None:intergenic
AGTTCTCCAAAGTGGGTTGT+GGG 0.427357 5_3:-31439516 Msa0807950:CDS
ATCTCCCTCTTTCTCGGATG+TGG 0.435940 5_3:+31439553 None:intergenic
AGTTTCGTGTATCGATTTCT+CGG 0.436319 5_3:-31435788 Msa0807950:three_prime_UTR
ACAAATGGTGCTCCTCTTGT+TGG 0.439251 5_3:-31436170 Msa0807950:CDS
TTGACAGGGAGATCCATTAT+GGG 0.444612 5_3:-31438235 Msa0807950:intron
AGAGTACCTACAGGAGCATA+AGG 0.447036 5_3:+31439455 None:intergenic
CCTCTTGTTGGACTTATTGG+CGG 0.451207 5_3:-31436158 Msa0807950:CDS
TTATCTTGGTTCGGAAAGGC+TGG 0.456270 5_3:-31436042 Msa0807950:CDS
ATGTCTTATATCTCTATTGT+GGG 0.460307 5_3:-31436129 Msa0807950:CDS
GAGTTCTCCAAAGTGGGTTG+TGG 0.461457 5_3:-31439517 Msa0807950:CDS
TTGCTTCCTTATGCTCCTGT+AGG 0.467828 5_3:-31439461 Msa0807950:intron
GTCGACCTGCGGAGCACAAG+TGG 0.469304 5_3:+31439594 None:intergenic
TTGGGTTCTGTTATGACAAA+TGG 0.470703 5_3:-31436185 Msa0807950:CDS
CAGCACCCCACAACCCACTT+TGG 0.476302 5_3:+31439510 None:intergenic
TCATAGATTAATTTGTTCCC+TGG 0.479197 5_3:+31438356 None:intergenic
AGTAGACAGATGGGAGTACT+TGG 0.483792 5_3:-31436069 Msa0807950:CDS
GGGGTCTCTTGACGTACTAT+GGG 0.484452 5_3:-31436979 Msa0807950:CDS
GTTAGCCACATCCGAGAAAG+AGG 0.484606 5_3:-31439558 Msa0807950:CDS
TTACGATCTGTGAACAGTAA+AGG 0.489239 5_3:+31437017 None:intergenic
TATGTCTTATATCTCTATTG+TGG 0.490285 5_3:-31436130 Msa0807950:CDS
TCAAAACATCAAGTTCATCA+AGG 0.493252 5_3:+31438327 None:intergenic
GAGACAGTCAACTCTCTTGT+GGG 0.493953 5_3:-31438201 Msa0807950:CDS
TGGAGGGAACACAGCAATGT+TGG 0.495986 5_3:+31439737 None:intergenic
TCGTGTATCGATTTCTCGGT+AGG 0.496104 5_3:-31435784 Msa0807950:three_prime_UTR
TCTTTGCTTGGAGCCTAAAG+AGG 0.496632 5_3:-31435874 Msa0807950:CDS
ATACCATTATGTAATTGGCC+AGG 0.497081 5_3:-31438374 Msa0807950:CDS
TAAGCCATTAAGCCAACAAC+CGG 0.500372 5_3:+31435900 None:intergenic
AGAACCCACTTGTGCTCCGC+AGG 0.505596 5_3:-31439599 Msa0807950:CDS
CACTTACAGGATGAAGAACT+GGG 0.507713 5_3:+31437181 None:intergenic
AGAGACAGTCAACTCTCTTG+TGG 0.509513 5_3:-31438202 Msa0807950:CDS
GATTGGAGCATTGTCATCGT+TGG 0.516689 5_3:+31436220 None:intergenic
TTCTTGCTTCAGATGTCAGA+AGG 0.519583 5_3:-31437080 Msa0807950:intron
TTGGTGGCATAGTAGACAGA+TGG 0.519695 5_3:-31436079 Msa0807950:CDS
CAGAGATATATCCCATATGA+AGG 0.524965 5_3:+31436013 None:intergenic
TTGAGGCAAAAGGTGAATGG+AGG 0.528767 5_3:+31439720 None:intergenic
TCCAAACAAATCCCTCATCC+GGG 0.530689 5_3:+31435631 None:intergenic
TTGGTTATCTTGGTTCGGAA+AGG 0.532249 5_3:-31436046 Msa0807950:CDS
CTTGTTGGACTTATTGGCGG+GGG 0.548045 5_3:-31436155 Msa0807950:CDS
TGGCCAATTACATAATGGTA+TGG 0.552559 5_3:+31438376 None:intergenic
CGTAAGAGAGATAGATACAA+GGG 0.553150 5_3:-31436999 Msa0807950:CDS
CGTGTATCGATTTCTCGGTA+GGG 0.556305 5_3:-31435783 Msa0807950:three_prime_UTR
GCTGGCTTACGCCTTCATAT+GGG 0.563649 5_3:-31436024 Msa0807950:CDS
GACAGATGGGAGTACTTGGT+TGG 0.563907 5_3:-31436065 Msa0807950:CDS
AGTGAATTGATGGAGCTGAA+AGG 0.567019 5_3:+31439659 None:intergenic
GAAGTATCTTAGATATGTGC+CGG 0.572628 5_3:-31435919 Msa0807950:CDS
TGTGGATTTGCGTCGACCTG+CGG 0.577634 5_3:+31439583 None:intergenic
CTCGGATGTGGCTAACTCTG+TGG 0.577757 5_3:+31439565 None:intergenic
CATCACTCTATCATCTCCAA+TGG 0.582082 5_3:-31439694 Msa0807950:CDS
AAGTGGGTTGTGGGGTGCTG+AGG 0.586713 5_3:-31439507 Msa0807950:CDS
TGGTGGCATAGTAGACAGAT+GGG 0.587147 5_3:-31436078 Msa0807950:CDS
TCTTGTTGGACTTATTGGCG+GGG 0.588167 5_3:-31436156 Msa0807950:CDS
TCATTCGGATAGCCATGTAT+GGG 0.588241 5_3:+31436249 None:intergenic
TACCATTATGTAATTGGCCA+GGG 0.593497 5_3:-31438373 Msa0807950:CDS
TCGTAAGAGAGATAGATACA+AGG 0.594101 5_3:-31437000 Msa0807950:CDS
TAAGGAGAGTTCTCCAAAGT+GGG 0.595163 5_3:-31439523 Msa0807950:CDS
GTTCTCCAAAGTGGGTTGTG+GGG 0.601465 5_3:-31439515 Msa0807950:CDS
TACGAAACATACTATTTGTG+AGG 0.605918 5_3:+31436943 None:intergenic
TGAGGCAAAAGGTGAATGGA+GGG 0.610016 5_3:+31439721 None:intergenic
CTGGAATTGGAAACAACGAG+TGG 0.613214 5_3:+31439623 None:intergenic
GACTCAATTTAGTAAACAGA+GGG 0.617034 5_3:-31437777 Msa0807950:CDS
CTAAGGAGAGTTCTCCAAAG+TGG 0.619039 5_3:-31439524 Msa0807950:CDS
TTAGCCACATCCGAGAAAGA+GGG 0.621133 5_3:-31439557 Msa0807950:CDS
TCGACCTGCGGAGCACAAGT+GGG 0.650037 5_3:+31439595 None:intergenic
AACATACCAAGATTCACGAA+TGG 0.658296 5_3:+31438150 None:intergenic
CCGCCAATAAGTCCAACAAG+AGG 0.662853 5_3:+31436158 None:intergenic
ACGATCTGTGAACAGTAAAG+GGG 0.671682 5_3:+31437019 None:intergenic
CCAAACAAATCCCTCATCCG+GGG 0.680009 5_3:+31435632 None:intergenic
AGACTCAATTTAGTAAACAG+AGG 0.681109 5_3:-31437778 Msa0807950:CDS
GGGTCTCTTGACGTACTATG+GGG 0.700610 5_3:-31436978 Msa0807950:CDS
AGGTTGTCACCGATCAACCA+AGG 0.701565 5_3:+31435975 None:intergenic
GTAAGAGAGATAGATACAAG+GGG 0.727954 5_3:-31436998 Msa0807950:CDS
ACTTACAGGATGAAGAACTG+GGG 0.768615 5_3:+31437182 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTAAAAAAGAAGAAA+TGG - chr5_3:31437688-31437707 Msa0807950:intron 10.0%
!! ATGAAATGAAAAAAAGATAA+AGG - chr5_3:31436012-31436031 Msa0807950:CDS 15.0%
!! TTACGATCAATAATATTAAA+AGG - chr5_3:31436643-31436662 Msa0807950:intron 15.0%
!!! TGATTTAATAAAGTATTTAG+AGG - chr5_3:31436737-31436756 Msa0807950:intron 15.0%
!! AAATTGTTGTAAGATATAAA+GGG - chr5_3:31436764-31436783 Msa0807950:intron 15.0%
!! ATTGACAAATATGAAAATAA+TGG + chr5_3:31437280-31437299 None:intergenic 15.0%
!! GTTAAAGGATTATATTAATT+GGG + chr5_3:31437938-31437957 None:intergenic 15.0%
!! AATTAATTATATAGCTCATG+TGG - chr5_3:31435933-31435952 Msa0807950:CDS 20.0%
!! TGTTACATGAAATTAAGTTT+AGG - chr5_3:31436042-31436061 Msa0807950:CDS 20.0%
!! GTTACATGAAATTAAGTTTA+GGG - chr5_3:31436043-31436062 Msa0807950:CDS 20.0%
!!! ATTTTGCCAAAAATAATGTT+TGG - chr5_3:31436078-31436097 Msa0807950:CDS 20.0%
!!! CACTTTTATCTTTAGTTAAA+AGG + chr5_3:31436219-31436238 None:intergenic 20.0%
!! CAATTTCTTCATTAACTAAA+AGG + chr5_3:31436462-31436481 None:intergenic 20.0%
!! GAAATTGTTGTAAGATATAA+AGG - chr5_3:31436763-31436782 Msa0807950:intron 20.0%
!!! TTTTTTTCTTGAATTTTGAC+AGG - chr5_3:31437036-31437055 Msa0807950:CDS 20.0%
!!! TTTTTTCTTGAATTTTGACA+GGG - chr5_3:31437037-31437056 Msa0807950:CDS 20.0%
!!! CAACTTAAACATTATTGATT+AGG + chr5_3:31437180-31437199 None:intergenic 20.0%
!!! TATGAAAATAATGGAAGAAA+CGG + chr5_3:31437271-31437290 None:intergenic 20.0%
!!! ATTTTTTATCCTCTTTCTTT+TGG - chr5_3:31437325-31437344 Msa0807950:intron 20.0%
!! CGTATTATTATAAATTCACA+AGG + chr5_3:31437607-31437626 None:intergenic 20.0%
!! CGTTAAAGGATTATATTAAT+TGG + chr5_3:31437939-31437958 None:intergenic 20.0%
!!! TGATTTTTTTGAGAATTATG+AGG - chr5_3:31437977-31437996 Msa0807950:intron 20.0%
!!! CAACAAATTTCATTTGAAAT+GGG + chr5_3:31438668-31438687 None:intergenic 20.0%
!! ACAACAAATTTCATTTGAAA+TGG + chr5_3:31438669-31438688 None:intergenic 20.0%
!! TCCAATCAAAAATTCAAAAT+TGG - chr5_3:31439082-31439101 Msa0807950:intron 20.0%
!! CCAATCAAAAATTCAAAATT+GGG - chr5_3:31439083-31439102 Msa0807950:intron 20.0%
!! TTTGAATGATACATTTAATC+TGG + chr5_3:31439744-31439763 None:intergenic 20.0%
!!! TTGTTATCTTTAGTTTGTGT+TGG - chr5_3:31435891-31435910 Msa0807950:CDS 25.0%
!!! TCATTTCATTTTTGTCCTTT+TGG + chr5_3:31436001-31436020 None:intergenic 25.0%
!!! GTTTTTCTGAAGAAGTATAA+CGG + chr5_3:31436158-31436177 None:intergenic 25.0%
!! TAACTAAAGATAAAAGTGTG+AGG - chr5_3:31436221-31436240 Msa0807950:CDS 25.0%
!! AACTAAAGATAAAAGTGTGA+GGG - chr5_3:31436222-31436241 Msa0807950:CDS 25.0%
!!! TAACAGTGTTGTTTTTGATT+CGG + chr5_3:31436626-31436645 None:intergenic 25.0%
! ATATTAAAAGGAGAAACCTA+AGG - chr5_3:31436655-31436674 Msa0807950:intron 25.0%
! ATCCTAAAAAAGGAGTAATA+AGG - chr5_3:31436710-31436729 Msa0807950:intron 25.0%
!!! AACCTTATTACTCCTTTTTT+AGG + chr5_3:31436715-31436734 None:intergenic 25.0%
! TAATCTGTTAATGAGATAAG+TGG - chr5_3:31436787-31436806 Msa0807950:intron 25.0%
! TGAATGCAACAATTATCATA+TGG + chr5_3:31436889-31436908 None:intergenic 25.0%
!!! TGAACTTGATGTTTTGAAAA+AGG - chr5_3:31436965-31436984 Msa0807950:CDS 25.0%
! AAAGCTATGCAAATTTATTG+GGG + chr5_3:31437001-31437020 None:intergenic 25.0%
! CAAAGCTATGCAAATTTATT+GGG + chr5_3:31437002-31437021 None:intergenic 25.0%
! TCAAAGCTATGCAAATTTAT+TGG + chr5_3:31437003-31437022 None:intergenic 25.0%
! GAGGATAAAAAATAGAAACA+TGG + chr5_3:31437318-31437337 None:intergenic 25.0%
!!! ATTATACTGATTTGTAGTTC+TGG - chr5_3:31437485-31437504 Msa0807950:intron 25.0%
! TTCTTAATTGCTTGAGAAAT+TGG - chr5_3:31437574-31437593 Msa0807950:intron 25.0%
! AAGAAATGGAATTTAGATAG+AGG - chr5_3:31437702-31437721 Msa0807950:intron 25.0%
! AGAAATGGAATTTAGATAGA+GGG - chr5_3:31437703-31437722 Msa0807950:intron 25.0%
! AGTCTATACAAACAGAAATA+AGG - chr5_3:31437735-31437754 Msa0807950:intron 25.0%
! GGTTATCACATATACAAATA+GGG + chr5_3:31437917-31437936 None:intergenic 25.0%
! AAGTTTGATAAGTACGTTAA+AGG + chr5_3:31437953-31437972 None:intergenic 25.0%
!!! TTCAATGATTTCTGTTTTGA+CGG - chr5_3:31438046-31438065 Msa0807950:intron 25.0%
! TGTACAAGTAACATATGATT+TGG - chr5_3:31438132-31438151 Msa0807950:intron 25.0%
! AGAAATATACTCTTCTATGT+AGG + chr5_3:31438400-31438419 None:intergenic 25.0%
!!! GTATATTTCTAGCATCAAAA+AGG - chr5_3:31438410-31438429 Msa0807950:intron 25.0%
!! CCCAATTTTGAATTTTTGAT+TGG + chr5_3:31439086-31439105 None:intergenic 25.0%
! TATGTCTTATATCTCTATTG+TGG - chr5_3:31439156-31439175 Msa0807950:intron 25.0%
! ATGTCTTATATCTCTATTGT+GGG - chr5_3:31439157-31439176 Msa0807950:intron 25.0%
! ATGATAGAGTGATGATTTTG+AGG + chr5_3:31435586-31435605 None:intergenic 30.0%
!! AAAAAAGAAAGAGTACCTAC+AGG + chr5_3:31435843-31435862 None:intergenic 30.0%
!! TCTTTAGTTTGTGTTGGAAT+TGG - chr5_3:31435897-31435916 Msa0807950:CDS 30.0%
TCATATGCAAATGAACCAAA+AGG - chr5_3:31435983-31436002 Msa0807950:CDS 30.0%
!!! TCTCAAGCAATGTACTTTTT+TGG + chr5_3:31436386-31436405 None:intergenic 30.0%
AGTACATTGCTTGAGAATTA+AGG - chr5_3:31436390-31436409 Msa0807950:intron 30.0%
!! TTTTCCACGTTGAGTTTTAT+GGG + chr5_3:31436493-31436512 None:intergenic 30.0%
! ATTTTCCACGTTGAGTTTTA+TGG + chr5_3:31436494-31436513 None:intergenic 30.0%
!! TACACAGTAATGTTTTTACG+AGG + chr5_3:31436518-31436537 None:intergenic 30.0%
CGTAAAAACATTACTGTGTA+CGG - chr5_3:31436518-31436537 Msa0807950:intron 30.0%
ACACCTAAACATCCTAAAAA+AGG - chr5_3:31436700-31436719 Msa0807950:intron 30.0%
!!! ACTCCTTTTTTAGGATGTTT+AGG + chr5_3:31436706-31436725 None:intergenic 30.0%
!! TCATAGATTAATTTGTTCCC+TGG + chr5_3:31436933-31436952 None:intergenic 30.0%
TCAAAACATCAAGTTCATCA+AGG + chr5_3:31436962-31436981 None:intergenic 30.0%
GATTAGGTGTAAAGAGAAAT+AGG + chr5_3:31437164-31437183 None:intergenic 30.0%
AAGAATCCTATCAAACAAAC+CGG + chr5_3:31437392-31437411 None:intergenic 30.0%
AAGTGTTATGATAGAAGAGT+AGG - chr5_3:31437428-31437447 Msa0807950:intron 30.0%
ATGATAGAAGAGTAGGATAA+AGG - chr5_3:31437435-31437454 Msa0807950:intron 30.0%
TGATAGAAGAGTAGGATAAA+GGG - chr5_3:31437436-31437455 Msa0807950:intron 30.0%
AGACTCAATTTAGTAAACAG+AGG - chr5_3:31437508-31437527 Msa0807950:intron 30.0%
GACTCAATTTAGTAAACAGA+GGG - chr5_3:31437509-31437528 Msa0807950:intron 30.0%
!! GTCTTTTATTTGGGTAATTC+AGG + chr5_3:31437545-31437564 None:intergenic 30.0%
!! CCAAGTTCAGTCTTTTATTT+GGG + chr5_3:31437554-31437573 None:intergenic 30.0%
! ACCAAGTTCAGTCTTTTATT+TGG + chr5_3:31437555-31437574 None:intergenic 30.0%
TCTGCTTTCTCAAGAAATTA+AGG + chr5_3:31437662-31437681 None:intergenic 30.0%
TATACAAATAGGGATTTAGC+TGG + chr5_3:31437907-31437926 None:intergenic 30.0%
GGGTTATCACATATACAAAT+AGG + chr5_3:31437918-31437937 None:intergenic 30.0%
AGGGAAATTGTTTCATCAAA+TGG + chr5_3:31438171-31438190 None:intergenic 30.0%
AGAAAAATTGTCCAACATCA+GGG + chr5_3:31438190-31438209 None:intergenic 30.0%
AAGAAAAATTGTCCAACATC+AGG + chr5_3:31438191-31438210 None:intergenic 30.0%
TATTCAACTTTGTGATTGGA+TGG - chr5_3:31438231-31438250 Msa0807950:CDS 30.0%
TACGAAACATACTATTTGTG+AGG + chr5_3:31438346-31438365 None:intergenic 30.0%
TGGCAACACAGAAAATATAA+AGG + chr5_3:31438474-31438493 None:intergenic 30.0%
!! TGCAAAGTATTGTCAAATAG+CGG - chr5_3:31438559-31438578 Msa0807950:intron 30.0%
GAAATGGGATTATGAAGAAA+AGG + chr5_3:31438653-31438672 None:intergenic 30.0%
TATACTACAATCTATGATGC+AGG + chr5_3:31438899-31438918 None:intergenic 30.0%
CATCATAGATTGTAGTATAG+CGG - chr5_3:31438900-31438919 Msa0807950:intron 30.0%
ATGTTGTCAATTGAGAATCA+CGG + chr5_3:31438947-31438966 None:intergenic 30.0%
!! TGTATACAATTTTTCAGCCT+TGG - chr5_3:31439294-31439313 Msa0807950:intron 30.0%
! TATTTTGCTGAACATTCTGT+AGG + chr5_3:31439334-31439353 None:intergenic 30.0%
ACAGAATGTTCAGCAAAATA+AGG - chr5_3:31439334-31439353 Msa0807950:intron 30.0%
AGTAATCAATTGACCTCTTT+AGG + chr5_3:31439428-31439447 None:intergenic 30.0%
!!! ATTTTGAGGCAAAAGGTGAA+TGG + chr5_3:31435572-31435591 None:intergenic 35.0%
!!! AGTGATGATTTTGAGGCAAA+AGG + chr5_3:31435579-31435598 None:intergenic 35.0%
! CTGAGGTCGTATATATTTTG+TGG - chr5_3:31435796-31435815 Msa0807950:three_prime_UTR 35.0%
TCTCTCTCTTTAACTCACTT+CGG - chr5_3:31436191-31436210 Msa0807950:CDS 35.0%
CTTGACAACAACTCAAAAAG+TGG - chr5_3:31436250-31436269 Msa0807950:CDS 35.0%
CATACTTGATGTCGAAACAT+TGG - chr5_3:31436275-31436294 Msa0807950:intron 35.0%
!! TAACTAAAAGGTGCCTTAGT+GGG + chr5_3:31436450-31436469 None:intergenic 35.0%
!! TTAACTAAAAGGTGCCTTAG+TGG + chr5_3:31436451-31436470 None:intergenic 35.0%
AACCTCATAGTTCATGGAAA+CGG + chr5_3:31436558-31436577 None:intergenic 35.0%
TACTCTAACCTCATAGTTCA+TGG + chr5_3:31436564-31436583 None:intergenic 35.0%
CTTTATCACAAATGCATCAG+AGG + chr5_3:31436590-31436609 None:intergenic 35.0%
CTCTGATGCATTTGTGATAA+AGG - chr5_3:31436588-31436607 Msa0807950:intron 35.0%
CAGCCATACCATTATGTAAT+TGG - chr5_3:31436907-31436926 Msa0807950:intron 35.0%
TGGCCAATTACATAATGGTA+TGG + chr5_3:31436913-31436932 None:intergenic 35.0%
ATACCATTATGTAATTGGCC+AGG - chr5_3:31436912-31436931 Msa0807950:intron 35.0%
TACCATTATGTAATTGGCCA+GGG - chr5_3:31436913-31436932 Msa0807950:intron 35.0%
AACATACCAAGATTCACGAA+TGG + chr5_3:31437139-31437158 None:intergenic 35.0%
! GTATTTTCGCCAAAAGAAAG+AGG + chr5_3:31437337-31437356 None:intergenic 35.0%
!! GTATTTTAGAAATGTACCCC+CGG - chr5_3:31437370-31437389 Msa0807950:intron 35.0%
AGAATCCTATCAAACAAACC+GGG + chr5_3:31437391-31437410 None:intergenic 35.0%
GATAGAAGAGTAGGATAAAG+GGG - chr5_3:31437437-31437456 Msa0807950:intron 35.0%
TGCTTTAATCGTACCTTTAC+AGG + chr5_3:31437465-31437484 None:intergenic 35.0%
CCCAAATAAAAGACTGAACT+TGG - chr5_3:31437551-31437570 Msa0807950:intron 35.0%
GAGGAATATATACACTGTTC+TGG - chr5_3:31437996-31438015 Msa0807950:intron 35.0%
!!! GATTTCTGTTTTGACGGTTT+TGG - chr5_3:31438052-31438071 Msa0807950:intron 35.0%
TGAAACAATTTCCCTGATGT+TGG - chr5_3:31438176-31438195 Msa0807950:CDS 35.0%
GGACTATTCAACTTTGTGAT+TGG - chr5_3:31438227-31438246 Msa0807950:CDS 35.0%
TACGATCTGTGAACAGTAAA+GGG + chr5_3:31438271-31438290 None:intergenic 35.0%
TTACGATCTGTGAACAGTAA+AGG + chr5_3:31438272-31438291 None:intergenic 35.0%
TCGTAAGAGAGATAGATACA+AGG - chr5_3:31438286-31438305 Msa0807950:intron 35.0%
CGTAAGAGAGATAGATACAA+GGG - chr5_3:31438287-31438306 Msa0807950:intron 35.0%
GTAAGAGAGATAGATACAAG+GGG - chr5_3:31438288-31438307 Msa0807950:intron 35.0%
AAAATACCATATCTCGTACC+CGG - chr5_3:31438866-31438885 Msa0807950:intron 35.0%
! AGCATTTTTGATCCCATACA+TGG - chr5_3:31439025-31439044 Msa0807950:intron 35.0%
CATCGTTGGCATTATTCATT+CGG + chr5_3:31439055-31439074 None:intergenic 35.0%
TTGGGTTCTGTTATGACAAA+TGG - chr5_3:31439101-31439120 Msa0807950:intron 35.0%
CAGAGATATATCCCATATGA+AGG + chr5_3:31439276-31439295 None:intergenic 35.0%
!! ATTTTTCAGCCTTGGTTGAT+CGG - chr5_3:31439302-31439321 Msa0807950:intron 35.0%
! GAAGTATCTTAGATATGTGC+CGG - chr5_3:31439367-31439386 Msa0807950:intron 35.0%
AATGGCTTATCTTCTTTGCT+TGG - chr5_3:31439400-31439419 Msa0807950:intron 35.0%
AATCGATACACGAAACTGTT+TGG + chr5_3:31439495-31439514 None:intergenic 35.0%
!! AGTTTCGTGTATCGATTTCT+CGG - chr5_3:31439498-31439517 Msa0807950:CDS 35.0%
CATCACTCTATCATCTCCAA+TGG - chr5_3:31435592-31435611 Msa0807950:three_prime_UTR 40.0%
!! AAGGTTTTGGTATGTGCCAT+TGG + chr5_3:31435611-31435630 None:intergenic 40.0%
! TTGATGGAGCTGAAAGGTTT+TGG + chr5_3:31435624-31435643 None:intergenic 40.0%
AGTGAATTGATGGAGCTGAA+AGG + chr5_3:31435630-31435649 None:intergenic 40.0%
TGCAGAAGAGAGTGAATTGA+TGG + chr5_3:31435640-31435659 None:intergenic 40.0%
ATTCTCATCTCCCTCTTTCT+CGG + chr5_3:31435742-31435761 None:intergenic 40.0%
AAGAGGGAGATGAGAATCTA+AGG - chr5_3:31435745-31435764 Msa0807950:intron 40.0%
TAAGGAGAGTTCTCCAAAGT+GGG - chr5_3:31435763-31435782 Msa0807950:three_prime_UTR 40.0%
GCCAAAAATAATGTTTGGCC+TGG - chr5_3:31436083-31436102 Msa0807950:CDS 40.0%
! GCCAGGCCAAACATTATTTT+TGG + chr5_3:31436087-31436106 None:intergenic 40.0%
CTTCTCCATTTAAGGAGAAG+AGG - chr5_3:31436106-31436125 Msa0807950:CDS 40.0%
TCCATTTAAGGAGAAGAGGA+GGG - chr5_3:31436110-31436129 Msa0807950:CDS 40.0%
GAAGAGGAGGGAAAAAATGT+CGG - chr5_3:31436122-31436141 Msa0807950:CDS 40.0%
AAGAGGAGGGAAAAAATGTC+GGG - chr5_3:31436123-31436142 Msa0807950:CDS 40.0%
!! AGAGAGAGAGTACTATGTCA+TGG + chr5_3:31436180-31436199 None:intergenic 40.0%
!! AACTAAAAGGTGCCTTAGTG+GGG + chr5_3:31436449-31436468 None:intergenic 40.0%
AACCGTTTCCATGAACTATG+AGG - chr5_3:31436553-31436572 Msa0807950:intron 40.0%
TTCCCTGGCCAATTACATAA+TGG + chr5_3:31436918-31436937 None:intergenic 40.0%
TTTGACAGGGAGATCCATTA+TGG - chr5_3:31437050-31437069 Msa0807950:CDS 40.0%
TTGACAGGGAGATCCATTAT+GGG - chr5_3:31437051-31437070 Msa0807950:CDS 40.0%
TCTGAACTGATAGCCCATAA+TGG + chr5_3:31437067-31437086 None:intergenic 40.0%
ATCTTGCCATTCGTGAATCT+TGG - chr5_3:31437130-31437149 Msa0807950:intron 40.0%
TTTGGCGAAAATACAGAGAG+CGG - chr5_3:31437343-31437362 Msa0807950:intron 40.0%
AATCCTATCAAACAAACCGG+GGG + chr5_3:31437389-31437408 None:intergenic 40.0%
GAATCCTATCAAACAAACCG+GGG + chr5_3:31437390-31437409 None:intergenic 40.0%
TGCTACCTCTACATTGATCT+AGG - chr5_3:31437843-31437862 Msa0807950:intron 40.0%
GCTACCTCTACATTGATCTA+GGG - chr5_3:31437844-31437863 Msa0807950:intron 40.0%
ACTTACAGGATGAAGAACTG+GGG + chr5_3:31438107-31438126 None:intergenic 40.0%
CACTTACAGGATGAAGAACT+GGG + chr5_3:31438108-31438127 None:intergenic 40.0%
ACACTTACAGGATGAAGAAC+TGG + chr5_3:31438109-31438128 None:intergenic 40.0%
ACTTGTACAGTGACACTTAC+AGG + chr5_3:31438121-31438140 None:intergenic 40.0%
TTCTTGCTTCAGATGTCAGA+AGG - chr5_3:31438206-31438225 Msa0807950:CDS 40.0%
ACGATCTGTGAACAGTAAAG+GGG + chr5_3:31438270-31438289 None:intergenic 40.0%
TATGCTATAGCATCGCTGTT+TGG + chr5_3:31438494-31438513 None:intergenic 40.0%
ACAGCGATGCTATAGCATAA+CGG - chr5_3:31438495-31438514 Msa0807950:intron 40.0%
TATGATGCAGGTACAATACC+GGG + chr5_3:31438887-31438906 None:intergenic 40.0%
CTATGATGCAGGTACAATAC+CGG + chr5_3:31438888-31438907 None:intergenic 40.0%
TCATTCGGATAGCCATGTAT+GGG + chr5_3:31439040-31439059 None:intergenic 40.0%
TTCATTCGGATAGCCATGTA+TGG + chr5_3:31439041-31439060 None:intergenic 40.0%
! TCTCTATTGTGGGCTCTTTT+TGG - chr5_3:31439167-31439186 Msa0807950:intron 40.0%
! GGTCGAATGGATGCAAATTT+TGG - chr5_3:31439188-31439207 Msa0807950:intron 40.0%
! CGAATGGATGCAAATTTTGG+TGG - chr5_3:31439191-31439210 Msa0807950:intron 40.0%
! GAGTACTTGGTTGGTTATCT+TGG - chr5_3:31439230-31439249 Msa0807950:intron 40.0%
! CTTGGTTGGTTATCTTGGTT+CGG - chr5_3:31439235-31439254 Msa0807950:intron 40.0%
!! TTGGTTATCTTGGTTCGGAA+AGG - chr5_3:31439240-31439259 Msa0807950:intron 40.0%
TAAGCCATTAAGCCAACAAC+CGG + chr5_3:31439389-31439408 None:intergenic 40.0%
ATCCAAACAAATCCCTCATC+CGG + chr5_3:31439659-31439678 None:intergenic 40.0%
TGAGGCAAAAGGTGAATGGA+GGG + chr5_3:31435568-31435587 None:intergenic 45.0%
TTGAGGCAAAAGGTGAATGG+AGG + chr5_3:31435569-31435588 None:intergenic 45.0%
CTGGAATTGGAAACAACGAG+TGG + chr5_3:31435666-31435685 None:intergenic 45.0%
!! CAAGTGGGTTCTTCTGGAAT+TGG + chr5_3:31435679-31435698 None:intergenic 45.0%
TTAGCCACATCCGAGAAAGA+GGG - chr5_3:31435729-31435748 Msa0807950:intron 45.0%
CTAAGGAGAGTTCTCCAAAG+TGG - chr5_3:31435762-31435781 Msa0807950:three_prime_UTR 45.0%
!! AGTTCTCCAAAGTGGGTTGT+GGG - chr5_3:31435770-31435789 Msa0807950:three_prime_UTR 45.0%
TTGCTTCCTTATGCTCCTGT+AGG - chr5_3:31435825-31435844 Msa0807950:three_prime_UTR 45.0%
! AGAGTACCTACAGGAGCATA+AGG + chr5_3:31435834-31435853 None:intergenic 45.0%
TCTCCTTAAATGGAGAAGCC+AGG + chr5_3:31436104-31436123 None:intergenic 45.0%
CTCCATTTAAGGAGAAGAGG+AGG - chr5_3:31436109-31436128 Msa0807950:CDS 45.0%
TCCCTCCTCTTCTCCTTAAA+TGG + chr5_3:31436114-31436133 None:intergenic 45.0%
!! GTCGAAACATTGGTGCTAGA+AGG - chr5_3:31436285-31436304 Msa0807950:intron 45.0%
!! CGAGTGCTGACATACTCTTT+AGG - chr5_3:31436325-31436344 Msa0807950:intron 45.0%
AGTAGCGATGGTCTAGGTTA+AGG + chr5_3:31436352-31436371 None:intergenic 45.0%
GCATATCCTAACAGTAGCGA+TGG + chr5_3:31436364-31436383 None:intergenic 45.0%
GACTCCCATAAAACTCAACG+TGG - chr5_3:31436486-31436505 Msa0807950:intron 45.0%
CATTACTGTGTACGGACTTG+AGG - chr5_3:31436526-31436545 Msa0807950:intron 45.0%
AGAAACCTAAGGTCTCAGCA+GGG - chr5_3:31436666-31436685 Msa0807950:intron 45.0%
TTATCTTCCACCCCAGTTTC+AGG + chr5_3:31436835-31436854 None:intergenic 45.0%
AGAGACAGTCAACTCTCTTG+TGG - chr5_3:31437084-31437103 Msa0807950:intron 45.0%
GAGACAGTCAACTCTCTTGT+GGG - chr5_3:31437085-31437104 Msa0807950:intron 45.0%
! AGAGCATTCAACTGTCAGCT+AGG - chr5_3:31437220-31437239 Msa0807950:CDS 45.0%
GGATAAAGGGGAACCTGTAA+AGG - chr5_3:31437449-31437468 Msa0807950:intron 45.0%
CACACATGTAACGAAGAGTG+TGG + chr5_3:31437773-31437792 None:intergenic 45.0%
TGGTCCCTAGATCAATGTAG+AGG + chr5_3:31437851-31437870 None:intergenic 45.0%
AGAGAGCAAGACGCAAAACA+TGG + chr5_3:31437871-31437890 None:intergenic 45.0%
GCGTCTTGCTCTCTATCATT+TGG - chr5_3:31437877-31437896 Msa0807950:intron 45.0%
!! CACTGTATCCTCTGAAGCAT+GGG - chr5_3:31438599-31438618 Msa0807950:intron 45.0%
ACAATACCGGGTACGAGATA+TGG + chr5_3:31438875-31438894 None:intergenic 45.0%
!! GATTGGAGCATTGTCATCGT+TGG + chr5_3:31439069-31439088 None:intergenic 45.0%
ACAAATGGTGCTCCTCTTGT+TGG - chr5_3:31439116-31439135 Msa0807950:intron 45.0%
GCTCCTCTTGTTGGACTTAT+TGG - chr5_3:31439125-31439144 Msa0807950:intron 45.0%
CCTCTTGTTGGACTTATTGG+CGG - chr5_3:31439128-31439147 Msa0807950:intron 45.0%
CTCTTGTTGGACTTATTGGC+GGG - chr5_3:31439129-31439148 Msa0807950:intron 45.0%
TCTTGTTGGACTTATTGGCG+GGG - chr5_3:31439130-31439149 Msa0807950:intron 45.0%
! TTGGTGGCATAGTAGACAGA+TGG - chr5_3:31439207-31439226 Msa0807950:intron 45.0%
TGGTGGCATAGTAGACAGAT+GGG - chr5_3:31439208-31439227 Msa0807950:intron 45.0%
!! AGTAGACAGATGGGAGTACT+TGG - chr5_3:31439217-31439236 Msa0807950:intron 45.0%
!! TTATCTTGGTTCGGAAAGGC+TGG - chr5_3:31439244-31439263 Msa0807950:intron 45.0%
!! CTTAGATATGTGCCGGTTGT+TGG - chr5_3:31439374-31439393 Msa0807950:intron 45.0%
TCTTTGCTTGGAGCCTAAAG+AGG - chr5_3:31439412-31439431 Msa0807950:intron 45.0%
!! TCGTGTATCGATTTCTCGGT+AGG - chr5_3:31439502-31439521 Msa0807950:CDS 45.0%
!! CGTGTATCGATTTCTCGGTA+GGG - chr5_3:31439503-31439522 Msa0807950:CDS 45.0%
TCCAAACAAATCCCTCATCC+GGG + chr5_3:31439658-31439677 None:intergenic 45.0%
TGGAGGGAACACAGCAATGT+TGG + chr5_3:31435552-31435571 None:intergenic 50.0%
GTTAGCCACATCCGAGAAAG+AGG - chr5_3:31435728-31435747 Msa0807950:intron 50.0%
ATCTCCCTCTTTCTCGGATG+TGG + chr5_3:31435736-31435755 None:intergenic 50.0%
!! GAGTTCTCCAAAGTGGGTTG+TGG - chr5_3:31435769-31435788 Msa0807950:three_prime_UTR 50.0%
!! GTTCTCCAAAGTGGGTTGTG+GGG - chr5_3:31435771-31435790 Msa0807950:three_prime_UTR 50.0%
TGGCCTGGCTTCTCCATTTA+AGG - chr5_3:31436098-31436117 Msa0807950:CDS 50.0%
! TGGTGCTAGAAGGAATGCCT+CGG - chr5_3:31436295-31436314 Msa0807950:intron 50.0%
CCTAACAGTAGCGATGGTCT+AGG + chr5_3:31436358-31436377 None:intergenic 50.0%
CCTAGACCATCGCTACTGTT+AGG - chr5_3:31436355-31436374 Msa0807950:intron 50.0%
ACTGTGTACGGACTTGAGGT+TGG - chr5_3:31436530-31436549 Msa0807950:intron 50.0%
GAGAAACCTAAGGTCTCAGC+AGG - chr5_3:31436665-31436684 Msa0807950:intron 50.0%
GAAACCTAAGGTCTCAGCAG+GGG - chr5_3:31436667-31436686 Msa0807950:intron 50.0%
AAACCTAAGGTCTCAGCAGG+GGG - chr5_3:31436668-31436687 Msa0807950:intron 50.0%
AGCTTGCATGCTCCTGAAAC+TGG - chr5_3:31436820-31436839 Msa0807950:intron 50.0%
GCTTGCATGCTCCTGAAACT+GGG - chr5_3:31436821-31436840 Msa0807950:intron 50.0%
CTTGCATGCTCCTGAAACTG+GGG - chr5_3:31436822-31436841 Msa0807950:intron 50.0%
GACAGTTGAATGCTCTGTGC+TGG + chr5_3:31437216-31437235 None:intergenic 50.0%
! GTACCCCCGGTTTGTTTGAT+AGG - chr5_3:31437383-31437402 Msa0807950:intron 50.0%
!! GACGGTTTTGGCAGAGTAGT+TGG - chr5_3:31438064-31438083 Msa0807950:intron 50.0%
AGGGGTCTCTTGACGTACTA+TGG - chr5_3:31438306-31438325 Msa0807950:intron 50.0%
GGGGTCTCTTGACGTACTAT+GGG - chr5_3:31438307-31438326 Msa0807950:intron 50.0%
GGGTCTCTTGACGTACTATG+GGG - chr5_3:31438308-31438327 Msa0807950:intron 50.0%
!! GCACTGTATCCTCTGAAGCA+TGG - chr5_3:31438598-31438617 Msa0807950:intron 50.0%
CCGCCAATAAGTCCAACAAG+AGG + chr5_3:31439131-31439150 None:intergenic 50.0%
CTTGTTGGACTTATTGGCGG+GGG - chr5_3:31439131-31439150 Msa0807950:intron 50.0%
!! GTGGGCTCTTTTTGGTCGAA+TGG - chr5_3:31439175-31439194 Msa0807950:intron 50.0%
!! GACAGATGGGAGTACTTGGT+TGG - chr5_3:31439221-31439240 Msa0807950:intron 50.0%
! GCTGGCTTACGCCTTCATAT+GGG - chr5_3:31439262-31439281 Msa0807950:intron 50.0%
AGGTTGTCACCGATCAACCA+AGG + chr5_3:31439314-31439333 None:intergenic 50.0%
!! TGTGCCGGTTGTTGGCTTAA+TGG - chr5_3:31439382-31439401 Msa0807950:intron 50.0%
CCAAACAAATCCCTCATCCG+GGG + chr5_3:31439657-31439676 None:intergenic 50.0%
! GGAGCACAAGTGGGTTCTTC+TGG + chr5_3:31435685-31435704 None:intergenic 55.0%
! TGTGGATTTGCGTCGACCTG+CGG + chr5_3:31435706-31435725 None:intergenic 55.0%
CTCGGATGTGGCTAACTCTG+TGG + chr5_3:31435724-31435743 None:intergenic 55.0%
TCACTCTGCTCACCCCACTA+AGG - chr5_3:31436434-31436453 Msa0807950:intron 55.0%
TATCCCCCTGCTGAGACCTT+AGG + chr5_3:31436674-31436693 None:intergenic 55.0%
TCAGACAAATGAGCGCACGC+TGG - chr5_3:31437801-31437820 Msa0807950:intron 55.0%
TACGCGTACCCATGCTTCAG+AGG + chr5_3:31438610-31438629 None:intergenic 55.0%
CTGAAGCATGGGTACGCGTA+CGG - chr5_3:31438610-31438629 Msa0807950:intron 55.0%
!! GGCTGGCTTACGCCTTCATA+TGG - chr5_3:31439261-31439280 Msa0807950:intron 55.0%
! CCCCGGATGAGGGATTTGTT+TGG - chr5_3:31439654-31439673 Msa0807950:CDS 55.0%
AGAACCCACTTGTGCTCCGC+AGG - chr5_3:31435687-31435706 Msa0807950:intron 60.0%
TCGACCTGCGGAGCACAAGT+GGG + chr5_3:31435694-31435713 None:intergenic 60.0%
CAGCACCCCACAACCCACTT+TGG + chr5_3:31435779-31435798 None:intergenic 60.0%
!! AAGTGGGTTGTGGGGTGCTG+AGG - chr5_3:31435779-31435798 Msa0807950:three_prime_UTR 60.0%
TCAGCACTCGTGCATGTCCG+AGG + chr5_3:31436315-31436334 None:intergenic 60.0%
GCATGCTCCTGAAACTGGGG+TGG - chr5_3:31436825-31436844 Msa0807950:intron 60.0%
GTCGACCTGCGGAGCACAAG+TGG + chr5_3:31435695-31435714 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 31435528 31439780 31435528 ID=Msa0807950;Name=Msa0807950
chr5_3 mRNA 31435528 31439780 31435528 ID=Msa0807950-mRNA-1;Parent=Msa0807950;Name=Msa0807950-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0.42|0.5|0.87|0.85|0.75|8|238|401
chr5_3 exon 31435528 31435657 31435528 ID=Msa0807950-mRNA-1:exon:10459;Parent=Msa0807950-mRNA-1
chr5_3 exon 31435758 31436281 31435758 ID=Msa0807950-mRNA-1:exon:10458;Parent=Msa0807950-mRNA-1
chr5_3 exon 31436955 31437090 31436955 ID=Msa0807950-mRNA-1:exon:10457;Parent=Msa0807950-mRNA-1
chr5_3 exon 31437188 31437280 31437188 ID=Msa0807950-mRNA-1:exon:10456;Parent=Msa0807950-mRNA-1
chr5_3 exon 31437736 31437806 31437736 ID=Msa0807950-mRNA-1:exon:10455;Parent=Msa0807950-mRNA-1
chr5_3 exon 31438157 31438250 31438157 ID=Msa0807950-mRNA-1:exon:10454;Parent=Msa0807950-mRNA-1
chr5_3 exon 31438322 31438398 31438322 ID=Msa0807950-mRNA-1:exon:10453;Parent=Msa0807950-mRNA-1
chr5_3 exon 31439462 31439780 31439462 ID=Msa0807950-mRNA-1:exon:10452;Parent=Msa0807950-mRNA-1
chr5_3 CDS 31439462 31439780 31439462 ID=Msa0807950-mRNA-1:cds;Parent=Msa0807950-mRNA-1
chr5_3 CDS 31438322 31438398 31438322 ID=Msa0807950-mRNA-1:cds;Parent=Msa0807950-mRNA-1
chr5_3 CDS 31438157 31438250 31438157 ID=Msa0807950-mRNA-1:cds;Parent=Msa0807950-mRNA-1
chr5_3 CDS 31437736 31437806 31437736 ID=Msa0807950-mRNA-1:cds;Parent=Msa0807950-mRNA-1
chr5_3 CDS 31437188 31437280 31437188 ID=Msa0807950-mRNA-1:cds;Parent=Msa0807950-mRNA-1
chr5_3 CDS 31436955 31437090 31436955 ID=Msa0807950-mRNA-1:cds;Parent=Msa0807950-mRNA-1
chr5_3 CDS 31435866 31436281 31435866 ID=Msa0807950-mRNA-1:cds;Parent=Msa0807950-mRNA-1
chr5_3 three_prime_UTR 31435758 31435865 31435758 ID=Msa0807950-mRNA-1:three_prime_utr;Parent=Msa0807950-mRNA-1
chr5_3 three_prime_UTR 31435528 31435657 31435528 ID=Msa0807950-mRNA-1:three_prime_utr;Parent=Msa0807950-mRNA-1
Gene Sequence

>Msa0807950

ATGACAACAACAGCGTTGTCTCCAACATTGCTGTGTTCCCTCCATTCACCTTTTGCCTCAAAATCATCACTCTATCATCTCCAATGGCACATACCAAAACCTTTCAGCTCCATCAATTCACTCTCTTCTGCAAAACCACTCGTTGTTTCCAATTCCAGAAGAACCCACTTGTGCTCCGCAGGTCGACGCAAATCCACAGAGTTAGCCACATCCGAGAAAGAGGGAGATGAGAATCTAAGGAGAGTTCTCCAAAGTGGGTTGTGGGGTGCTGAGGTCGTATATATTTTGTGGCTCTTCTTGCTTCCTTATGCTCCTGTAGCCATACCATTATGTAATTGGCCAGGGAACAAATTAATCTATGAGCAATGCCTTGATGAACTTGATGTTTTGAAAAAGGGAGATCCATTATGGGCTATCAGTTCAGAGACAGTCAACTCTCTTGTGGGTCTTTCTCTCAATTTCTTTTTCATCTTGCCATTCGTGAATCTTGTTCTGGAGACTCAATTTAGTAAACAGAGGGACATAGTATACCTGAATTACCCAAATAAAAGACTGAACTTGAAAATTTTTGCTTTGCAATTCAATGATTTCTGTTTTGACGGTTTTGGCAGAGTAGTTGGCATTCGTCTGATTGATGCCCCAGTTCTTCATCCTATGTCAGAAGGACTATTCAACTTTGTGATTGGATGGACATTCATGTTTGCCCCTTTACTGTTCACAGATCGTAAGAGAGATAGATACAAGGGGTCTCTTGACGTACTATGGGGACTGCAAATGTTCCTCACAAATACATTTTTGATCCCATACATGGCTATCCGAATGAATAATGCCAACGATGACAATGCTCCAATCAAAAATTCAAAATTGGGTTCTGTTATGACAAATGGTGCTCCTCTTGTTGGACTTATTGGCGGGGGTGTATGTCTTATATCTCTATTGTGGGCTCTTTTTGGTCGAATGGATGCAAATTTTGGTGGCATAGTAGACAGATGGGAGTACTTGGTTGGTTATCTTGGTTCGGAAAGGCTGGCTTACGCCTTCATATGGGATATATCTCTGTATACAATTTTTCAGCCTTGGTTGATCGGTGACAACCTACAGAATGTTCAGCAAAATAAGGTTGCAGTAGTGAAGTATCTTAGATATGTGCCGGTTGTTGGCTTAATGGCTTATCTTCTTTGCTTGGAGCCTAAAGAGGTCAATTGA

Protein sequence

>Msa0807950

MTTTALSPTLLCSLHSPFASKSSLYHLQWHIPKPFSSINSLSSAKPLVVSNSRRTHLCSAGRRKSTELATSEKEGDENLRRVLQSGLWGAEVVYILWLFLLPYAPVAIPLCNWPGNKLIYEQCLDELDVLKKGDPLWAISSETVNSLVGLSLNFFFILPFVNLVLETQFSKQRDIVYLNYPNKRLNLKIFALQFNDFCFDGFGRVVGIRLIDAPVLHPMSEGLFNFVIGWTFMFAPLLFTDRKRDRYKGSLDVLWGLQMFLTNTFLIPYMAIRMNNANDDNAPIKNSKLGSVMTNGAPLVGLIGGGVCLISLLWALFGRMDANFGGIVDRWEYLVGYLGSERLAYAFIWDISLYTIFQPWLIGDNLQNVQQNKVAVVKYLRYVPVVGLMAYLLCLEPKEVN*