AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0147990


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0147990 MtrunA17_Chr1g0169451 79.726 365 5 3 1 296 1 365 0.0 544
Msa0147990 MtrunA17_Chr5g0397071 50.538 93 41 2 136 223 136 228 2.03e-19 87.0
Msa0147990 MtrunA17_Chr7g0249231 43.820 89 45 1 139 227 76 159 1.80e-14 72.0
Msa0147990 MtrunA17_Chr1g0210221 44.444 90 43 3 138 226 7 90 5.66e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0147990 AT4G13590.1 56.418 335 90 2 18 296 25 359 7.56e-108 318
Msa0147990 AT4G13590.2 55.821 335 92 2 18 296 25 359 2.19e-106 314
Msa0147990 AT1G64150.1 42.384 151 64 4 137 275 157 296 4.29e-21 92.4
Msa0147990 AT5G36290.1 43.119 109 52 3 131 236 74 175 1.69e-13 69.7
Msa0147990 AT5G36290.2 43.119 109 52 3 131 236 74 175 1.69e-13 69.7
Msa0147990 AT1G25520.1 46.067 89 41 2 138 225 7 89 2.07e-12 65.9
Msa0147990 AT1G68650.1 43.820 89 43 2 138 225 7 89 2.36e-11 62.8

Find 72 sgRNAs with CRISPR-Local

Find 710 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCATCAGGTTGGTTATT+TGG 0.117707 1_4:-8149913 Msa0147990:intron
TTTATGTGTGGTTGGGATTT+TGG 0.132200 1_4:+8158927 None:intergenic
CAAATCCTCTTGAGATTCTT+TGG 0.174329 1_4:-8150831 Msa0147990:CDS
TTTCATCAGGTTGGTTATTT+GGG 0.287053 1_4:-8149912 Msa0147990:intron
TCAATCCTATCTGTTGTAAT+TGG 0.287895 1_4:-8152517 Msa0147990:CDS
AAAAGAAACATGAAAGGTTT+AGG 0.305294 1_4:-8158864 Msa0147990:exon
AATTTCTGTCAGAGACATTC+TGG 0.311817 1_4:+8158161 None:intergenic
TTTCTATGTTCTCTCATCAT+TGG 0.313993 1_4:+8149756 None:intergenic
CCTATTCGAACTTACTTGTT+TGG 0.322104 1_4:+8152464 None:intergenic
TTCTCAAAGCCTGGCTCTAA+TGG 0.329012 1_4:+8149638 None:intergenic
TTAATATTTGTTTCTGAAAT+CGG 0.332716 1_4:-8156812 Msa0147990:CDS
CTTGCAGCAATTGCAAAATC+AGG 0.333816 1_4:-8156854 Msa0147990:CDS
AGTAAGATGCAGACAGAAAT+CGG 0.356146 1_4:-8158275 Msa0147990:CDS
CCATCTTGTACTTATTTCTC+TGG 0.370720 1_4:-8158777 Msa0147990:CDS
ATATATCATTGATGGAAATA+AGG 0.375069 1_4:-8149802 Msa0147990:three_prime_UTR
TCAGCTAGTTCATCAAGTTC+AGG 0.393960 1_4:+8151217 None:intergenic
CTGCATATTCTCCGATTGGC+AGG 0.397092 1_4:+8151332 None:intergenic
TTGATTTCATAGTAAACCTT+AGG 0.400190 1_4:-8149711 Msa0147990:three_prime_UTR
ATTCTTTATTGCTGCACTCT+TGG 0.409806 1_4:-8153623 Msa0147990:CDS
ATGTCAATAATTTGCTCCTA+AGG 0.410529 1_4:+8149695 None:intergenic
CTTGTGCTCGAATTGTTTCA+CGG 0.419065 1_4:+8158239 None:intergenic
ATCAAATATTAGCGTTGGAC+CGG 0.424620 1_4:-8158215 Msa0147990:CDS
GTTAGGATCAATGGGTGCTC+TGG 0.445738 1_4:-8152548 Msa0147990:CDS
ACAGCTTTCTTCTCAAAGCC+TGG 0.455912 1_4:+8149629 None:intergenic
TGCGCGCAATATATCATTGA+TGG 0.473184 1_4:-8149810 Msa0147990:three_prime_UTR
GTAAGATGCAGACAGAAATC+GGG 0.474277 1_4:-8158274 Msa0147990:CDS
TCAAATATTAGCGTTGGACC+GGG 0.489113 1_4:-8158214 Msa0147990:CDS
TTCAATATTGCAAATGAAAG+AGG 0.489232 1_4:+8158807 None:intergenic
TTACTTGTTTGGAACTGAGC+AGG 0.496197 1_4:+8152475 None:intergenic
ACAGAAATCGGGGTTGAGCT+TGG 0.500440 1_4:-8158263 Msa0147990:CDS
CAGGTTGGTTATTTGGGCGG+AGG 0.504510 1_4:-8149906 Msa0147990:CDS
AAAGCTATAGAGACGGGATA+AGG 0.505986 1_4:+8156944 None:intergenic
CATACACCCTTGATTCCAAA+GGG 0.511728 1_4:-8158837 Msa0147990:CDS
CTACCTACAGCCCTGCCAAT+CGG 0.512958 1_4:-8151343 Msa0147990:intron
AAACTTACATGGAGATAAAG+TGG 0.528431 1_4:+8158749 None:intergenic
TAAAATCAATAAAAGACGCA+TGG 0.530108 1_4:-8151282 Msa0147990:CDS
GCAAATTATTGACATGGTGA+TGG 0.532893 1_4:-8149687 Msa0147990:three_prime_UTR
TCGAATGTTCTGCTAAGCTA+AGG 0.537467 1_4:+8158990 None:intergenic
CGCATGGGATCTTCCTTCAA+AGG 0.539180 1_4:-8151266 Msa0147990:CDS
TTGTGCTCGAATTGTTTCAC+GGG 0.545227 1_4:+8158240 None:intergenic
CTTGGCAATGCAATATGAGA+AGG 0.551638 1_4:-8153605 Msa0147990:CDS
TCACTAATAGCGTTTGTGAA+AGG 0.557958 1_4:-8156893 Msa0147990:CDS
AAATATTAGCGTTGGACCGG+GGG 0.559963 1_4:-8158212 Msa0147990:CDS
AGCACAAAAGCTATAGAGAC+GGG 0.560001 1_4:+8156938 None:intergenic
ACTGCTGCATATTCTCCGAT+TGG 0.561503 1_4:+8151328 None:intergenic
TGCATATTCTCCGATTGGCA+GGG 0.562749 1_4:+8151333 None:intergenic
CCAGAGAAATAAGTACAAGA+TGG 0.563642 1_4:+8158777 None:intergenic
AAAATCAATAAAAGACGCAT+GGG 0.563865 1_4:-8151281 Msa0147990:CDS
CAAGCATCAAATATTAGCGT+TGG 0.566263 1_4:-8158220 Msa0147990:CDS
AATATTGCAAATGAAAGAGG+AGG 0.573313 1_4:+8158810 None:intergenic
AGGTTGGTTATTTGGGCGGA+GGG 0.573618 1_4:-8149905 Msa0147990:CDS
TGTTTCTGAAATCGGTGACA+AGG 0.580810 1_4:-8156804 Msa0147990:intron
CATCAGGTTGGTTATTTGGG+CGG 0.582631 1_4:-8149909 Msa0147990:intron
TTATTGCTTCCATAATCCCC+CGG 0.585329 1_4:+8158196 None:intergenic
CAGGCACTGATTGAAAGATA+CGG 0.586259 1_4:+8152494 None:intergenic
TCATACACCCTTGATTCCAA+AGG 0.588292 1_4:-8158838 Msa0147990:CDS
CAAATATTAGCGTTGGACCG+GGG 0.588654 1_4:-8158213 Msa0147990:CDS
TATCATTGATGGAAATAAGG+AGG 0.590185 1_4:-8149799 Msa0147990:three_prime_UTR
TGATATCTACCATTAGAGCC+AGG 0.593239 1_4:-8149647 Msa0147990:three_prime_UTR
AATGCAATATGAGAAGGGAT+TGG 0.594404 1_4:-8153599 Msa0147990:intron
CTAATAGCGTTTGTGAAAGG+AGG 0.597957 1_4:-8156890 Msa0147990:CDS
ACGGGATAAGGAATCTGAGT+AGG 0.607992 1_4:+8156956 None:intergenic
TACGGCCAATTACAACAGAT+AGG 0.609783 1_4:+8152512 None:intergenic
CAGCACAAAAGCTATAGAGA+CGG 0.611599 1_4:+8156937 None:intergenic
GGAGGATACATGCTCGATCA+CGG 0.612993 1_4:-8149781 Msa0147990:three_prime_UTR
GATTTCCAAAGAATCTCAAG+AGG 0.623224 1_4:+8150826 None:intergenic
TTGGCAATGCAATATGAGAA+GGG 0.625006 1_4:-8153604 Msa0147990:CDS
ATTGCTGCAAGAACTGATGA+AGG 0.633169 1_4:+8156866 None:intergenic
TGATGAACTAGCTGAAGCAG+AGG 0.638039 1_4:-8151209 Msa0147990:CDS
TTAGGAGCAAATTATTGACA+TGG 0.661521 1_4:-8149693 Msa0147990:three_prime_UTR
AATATCTTCAGGCATCGCAA+CGG 0.661954 1_4:-8150858 Msa0147990:intron
TAAGATGCAGACAGAAATCG+GGG 0.689757 1_4:-8158273 Msa0147990:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATAAATAAAATATTAAT+CGG - chr1_4:8155241-8155260 Msa0147990:intron 0.0%
!!! TTTTTTTTTTCTTATCAATT+TGG + chr1_4:8149947-8149966 None:intergenic 10.0%
!! AAATATATACATTATGTTAT+TGG - chr1_4:8150168-8150187 Msa0147990:intron 10.0%
!! ATTTAGTGTAATTTATATTT+CGG - chr1_4:8155894-8155913 Msa0147990:intron 10.0%
!!! TCTTTACAATTTTTTTTTAA+TGG - chr1_4:8156633-8156652 Msa0147990:intron 10.0%
!! TGAAAATAAATTTATAAAGA+GGG + chr1_4:8156768-8156787 None:intergenic 10.0%
!! TTGAAAATAAATTTATAAAG+AGG + chr1_4:8156769-8156788 None:intergenic 10.0%
!!! TAATAACTAGTTTAAAATTC+TGG - chr1_4:8149987-8150006 Msa0147990:intron 15.0%
!! CATCTTACTATATATAATTT+AGG + chr1_4:8150229-8150248 None:intergenic 15.0%
!!! CTTTTATTAGAATTGTAATA+GGG + chr1_4:8151509-8151528 None:intergenic 15.0%
!!! ACTTTTATTAGAATTGTAAT+AGG + chr1_4:8151510-8151529 None:intergenic 15.0%
!!! TTAATATTTGTTTCTGAAAT+CGG - chr1_4:8151703-8151722 Msa0147990:intron 15.0%
!! TTGTAACTAAAGAATATAAA+AGG - chr1_4:8154775-8154794 Msa0147990:intron 15.0%
!! TGTAACTAAAGAATATAAAA+GGG - chr1_4:8154776-8154795 Msa0147990:intron 15.0%
!! ATTAGAATTATATGTATTCA+TGG - chr1_4:8154836-8154855 Msa0147990:intron 15.0%
!! TTATAATTTATATATTGACC+AGG - chr1_4:8155940-8155959 Msa0147990:intron 15.0%
!! GAAAATAAATTTATAAAGAG+GGG + chr1_4:8156767-8156786 None:intergenic 15.0%
!! GAATTATATTACTTTGATAT+TGG - chr1_4:8157593-8157612 Msa0147990:intron 15.0%
!! AAAAAGTTATATATAGCTTA+TGG + chr1_4:8158241-8158260 None:intergenic 15.0%
!!! ATTTCATTTTTCTTTATGTG+TGG + chr1_4:8149603-8149622 None:intergenic 20.0%
!! TCATAAAAAAGAAACATGAA+AGG - chr1_4:8149645-8149664 Msa0147990:three_prime_UTR 20.0%
!! AGATATTGAAAAAACTTACA+TGG + chr1_4:8149780-8149799 None:intergenic 20.0%
!!! TGTAAGTTTTTTCAATATCT+TGG - chr1_4:8149780-8149799 Msa0147990:three_prime_UTR 20.0%
!!! TATAGTATTTTGTTATGTTC+TGG - chr1_4:8149856-8149875 Msa0147990:exon 20.0%
!! ACAAAAAATGTTGTTCTTAT+TGG - chr1_4:8150134-8150153 Msa0147990:intron 20.0%
!!! GAAAAGTTGGTAAAAAAAAT+AGG - chr1_4:8150958-8150977 Msa0147990:intron 20.0%
!!! AAGTATATATTTTTTTGGGT+TGG - chr1_4:8151526-8151545 Msa0147990:intron 20.0%
!! TAACCTACTTAAGTATAAAA+CGG - chr1_4:8151782-8151801 Msa0147990:intron 20.0%
!!! GATTATTAACTTGATTATGA+AGG - chr1_4:8151857-8151876 Msa0147990:intron 20.0%
!! TTAAATCTAACATGAAAAGT+TGG - chr1_4:8151998-8152017 Msa0147990:intron 20.0%
!!! AAATTACTAGTTTACTCTAA+TGG + chr1_4:8152543-8152562 None:intergenic 20.0%
!!! ACTAGTAATTTAACATGTTT+TGG - chr1_4:8152552-8152571 Msa0147990:CDS 20.0%
!!! CTAGTAATTTAACATGTTTT+GGG - chr1_4:8152553-8152572 Msa0147990:CDS 20.0%
!!! AAATTACTAGTTTACTCTAA+TGG + chr1_4:8152543-8152562 None:intergenic 20.0%
!! TTATTCATGAAAATCTTTCA+GGG - chr1_4:8154653-8154672 Msa0147990:intron 20.0%
!!! TTGTTTTGTTTTAATCTTTC+TGG - chr1_4:8154698-8154717 Msa0147990:intron 20.0%
!! GTAACTAAAGAATATAAAAG+GGG - chr1_4:8154777-8154796 Msa0147990:intron 20.0%
!! TAATTTCAATCATGAAATGT+AGG + chr1_4:8155061-8155080 None:intergenic 20.0%
!! GGATAACTAATTAATAGTAT+AGG + chr1_4:8155320-8155339 None:intergenic 20.0%
!! CAGAATAGCTAAATTTATAT+GGG + chr1_4:8155549-8155568 None:intergenic 20.0%
!! TTAAAACTATGAGCATTAAT+TGG + chr1_4:8155820-8155839 None:intergenic 20.0%
!! GCTTATAAATTGATATTATG+TGG - chr1_4:8156214-8156233 Msa0147990:intron 20.0%
!! AATGAGAATAACATTGAAAA+AGG + chr1_4:8156265-8156284 None:intergenic 20.0%
!! AATCGACATATAGATTTAAT+TGG + chr1_4:8156308-8156327 None:intergenic 20.0%
!! TTAGCATATACTTCATAATT+TGG - chr1_4:8157776-8157795 Msa0147990:intron 20.0%
!! AAATACAAAGAATTAATCAG+AGG + chr1_4:8158552-8158571 None:intergenic 20.0%
!! ATATATCATTGATGGAAATA+AGG - chr1_4:8158713-8158732 Msa0147990:intron 20.0%
!!! AAGTTTTCATTTCTAATGAA+TGG + chr1_4:8158984-8159003 None:intergenic 20.0%
!! ATTTTTCTTTATGTGTGGTT+GGG + chr1_4:8149598-8149617 None:intergenic 25.0%
! AAAAGAAACATGAAAGGTTT+AGG - chr1_4:8149651-8149670 Msa0147990:three_prime_UTR 25.0%
! TTCAATATTGCAAATGAAAG+AGG + chr1_4:8149711-8149730 None:intergenic 25.0%
! GATTTCAATGTTGTTCTTAT+TGG - chr1_4:8150009-8150028 Msa0147990:intron 25.0%
!! TACTTACGATTGTTTTCTTA+AGG - chr1_4:8150191-8150210 Msa0147990:intron 25.0%
! AATTGATGCTGTTATCAAAT+TGG - chr1_4:8150625-8150644 Msa0147990:intron 25.0%
!! GATTTTTAACGTTACAACTA+AGG + chr1_4:8150658-8150677 None:intergenic 25.0%
!! AGGATTTTTCTTTTTACTCT+TGG - chr1_4:8150801-8150820 Msa0147990:intron 25.0%
!! TTTTCTTTTTACTCTTGGAT+TGG - chr1_4:8150806-8150825 Msa0147990:CDS 25.0%
!! TTTACCAACTTTTCTACTAT+AGG + chr1_4:8150952-8150971 None:intergenic 25.0%
! GTAAAAAAAATAGGCTTAGA+TGG - chr1_4:8150967-8150986 Msa0147990:intron 25.0%
! GAGAAATAACTGAGTTTATT+TGG + chr1_4:8151164-8151183 None:intergenic 25.0%
! AAAGAGATACAGAATATCAA+AGG - chr1_4:8151249-8151268 Msa0147990:CDS 25.0%
!! TAATGATTTGAAGTGTCAAT+TGG - chr1_4:8151272-8151291 Msa0147990:CDS 25.0%
! ATTCCATATGTGTGATATTA+GGG + chr1_4:8151355-8151374 None:intergenic 25.0%
! ATTCATTATGCAGATTATGT+AGG - chr1_4:8151399-8151418 Msa0147990:intron 25.0%
! ACCAAAATGTTCATGTATAA+TGG + chr1_4:8151808-8151827 None:intergenic 25.0%
! TAGTTTAAGCTATCAAGTAA+AGG - chr1_4:8151959-8151978 Msa0147990:intron 25.0%
! ACATGGAAAATGTAATCAAA+TGG - chr1_4:8152166-8152185 Msa0147990:intron 25.0%
!!! TAATCAAATGGATTAGAATC+AGG - chr1_4:8152178-8152197 Msa0147990:intron 25.0%
!!! AATCAAATGGATTAGAATCA+GGG - chr1_4:8152179-8152198 Msa0147990:intron 25.0%
! AGTGTATTATTCATGATGAA+AGG - chr1_4:8152211-8152230 Msa0147990:intron 25.0%
! AAGGAGAATTCTGTTATATA+GGG + chr1_4:8152355-8152374 None:intergenic 25.0%
!! TTACTCCTTTAACATGTTTT+GGG - chr1_4:8152512-8152531 Msa0147990:CDS 25.0%
!!! TAATTTAACATGTTTTGGGA+TGG - chr1_4:8152557-8152576 Msa0147990:intron 25.0%
!! GGTTCTCTTTGAATATATTT+TGG + chr1_4:8152772-8152791 None:intergenic 25.0%
! ATAATGAATTTCCTCAACAT+GGG - chr1_4:8152792-8152811 Msa0147990:intron 25.0%
! AACACTTAGTAAATCCATTT+GGG + chr1_4:8152869-8152888 None:intergenic 25.0%
!!! AAATTTCTTTTTCATTGCCA+AGG + chr1_4:8154361-8154380 None:intergenic 25.0%
! ACTGAGAAAAGGTAATAAAA+TGG - chr1_4:8154437-8154456 Msa0147990:intron 25.0%
!!! AAATGGATTAGAATCAGTTA+AGG - chr1_4:8154454-8154473 Msa0147990:intron 25.0%
! CTTATTCATGAAAATCTTTC+AGG - chr1_4:8154652-8154671 Msa0147990:intron 25.0%
! GATATCATCACATCAATATT+GGG + chr1_4:8155009-8155028 None:intergenic 25.0%
! AGATATCATCACATCAATAT+TGG + chr1_4:8155010-8155029 None:intergenic 25.0%
! ATTGAAATTACTCTTCACTT+TGG - chr1_4:8155071-8155090 Msa0147990:intron 25.0%
! AGTATAGGTACAATCAATTT+GGG + chr1_4:8155305-8155324 None:intergenic 25.0%
! TAGTATAGGTACAATCAATT+TGG + chr1_4:8155306-8155325 None:intergenic 25.0%
!! TGTTTTTCTAGGTTTAAATG+AGG + chr1_4:8155341-8155360 None:intergenic 25.0%
! CTAAATTGTTTATCGAAAGA+GGG + chr1_4:8155432-8155451 None:intergenic 25.0%
! TCTAAATTGTTTATCGAAAG+AGG + chr1_4:8155433-8155452 None:intergenic 25.0%
! TCTTTCGATAAACAATTTAG+AGG - chr1_4:8155432-8155451 Msa0147990:intron 25.0%
!! TTGATTGGTTAAAATTCACA+TGG - chr1_4:8155502-8155521 Msa0147990:intron 25.0%
!! TGATTGGTTAAAATTCACAT+GGG - chr1_4:8155503-8155522 Msa0147990:intron 25.0%
! CCAGAATAGCTAAATTTATA+TGG + chr1_4:8155550-8155569 None:intergenic 25.0%
! CCATATAAATTTAGCTATTC+TGG - chr1_4:8155547-8155566 Msa0147990:intron 25.0%
! ATTTCTACACAAGTTACAAT+GGG + chr1_4:8155682-8155701 None:intergenic 25.0%
! GGTAATATATAAAAGAGAAG+TGG + chr1_4:8155715-8155734 None:intergenic 25.0%
! ATTGGTACACTAGTATTTAT+TGG + chr1_4:8156290-8156309 None:intergenic 25.0%
! AAATTTATAAAGAGGGGATT+GGG + chr1_4:8156761-8156780 None:intergenic 25.0%
! TAAATTTATAAAGAGGGGAT+TGG + chr1_4:8156762-8156781 None:intergenic 25.0%
! TCAATGTACTATTTCACATT+AGG - chr1_4:8157043-8157062 Msa0147990:intron 25.0%
! CAAACACTGAATGAAAATTA+TGG + chr1_4:8157092-8157111 None:intergenic 25.0%
!!! GTAACTCTTCTTATGTTTTT+TGG - chr1_4:8157208-8157227 Msa0147990:intron 25.0%
!!! ATGCGTCTTTTATTGATTTT+AGG + chr1_4:8157234-8157253 None:intergenic 25.0%
! TAAAATCAATAAAAGACGCA+TGG - chr1_4:8157233-8157252 Msa0147990:intron 25.0%
! AAAATCAATAAAAGACGCAT+GGG - chr1_4:8157234-8157253 Msa0147990:intron 25.0%
!! TGGTTGTGAATATTTTTCTT+AGG - chr1_4:8157372-8157391 Msa0147990:intron 25.0%
!! GGTTGTGAATATTTTTCTTA+GGG - chr1_4:8157373-8157392 Msa0147990:intron 25.0%
!! ACTTGTTAAGGATTTAAAAG+AGG + chr1_4:8157479-8157498 None:intergenic 25.0%
! AAAACTTGACAATAAGAGAA+CGG + chr1_4:8157525-8157544 None:intergenic 25.0%
!! TTTTATAAGTTGCAACAGTT+CGG - chr1_4:8157541-8157560 Msa0147990:intron 25.0%
! ATACAAAAGATCAGAGAAAA+AGG + chr1_4:8157745-8157764 None:intergenic 25.0%
!!! ATCTTACAATTTGTTGCATT+TGG - chr1_4:8157861-8157880 Msa0147990:intron 25.0%
! AAGTAATACTGAAATGTTGA+GGG + chr1_4:8157898-8157917 None:intergenic 25.0%
! AAAGTAATACTGAAATGTTG+AGG + chr1_4:8157899-8157918 None:intergenic 25.0%
!!! TTGTATTGGTTTATGTTATC+AGG - chr1_4:8157984-8158003 Msa0147990:intron 25.0%
!! TTGACAGTTTTTGCTTTATA+TGG - chr1_4:8158120-8158139 Msa0147990:intron 25.0%
!! TGACAGTTTTTGCTTTATAT+GGG - chr1_4:8158121-8158140 Msa0147990:intron 25.0%
! TAACTACATTTCAGAAAAAC+TGG - chr1_4:8158514-8158533 Msa0147990:intron 25.0%
! AAATCAAAAAACACCGAAAA+AGG + chr1_4:8158661-8158680 None:intergenic 25.0%
! TTGATTTCATAGTAAACCTT+AGG - chr1_4:8158804-8158823 Msa0147990:CDS 25.0%
!!! CTTGTTTTTGTGTTGAACTT+GGG + chr1_4:8149501-8149520 None:intergenic 30.0%
!!! TCTTGTTTTTGTGTTGAACT+TGG + chr1_4:8149502-8149521 None:intergenic 30.0%
! CATTTTTCTTTATGTGTGGT+TGG + chr1_4:8149599-8149618 None:intergenic 30.0%
AATATTGCAAATGAAAGAGG+AGG + chr1_4:8149708-8149727 None:intergenic 30.0%
AAACTTACATGGAGATAAAG+TGG + chr1_4:8149769-8149788 None:intergenic 30.0%
! TTCAATATCTTGGTTTGACT+TGG - chr1_4:8149790-8149809 Msa0147990:three_prime_UTR 30.0%
AATTGGATATCCAATTCAAG+AGG - chr1_4:8149914-8149933 Msa0147990:intron 30.0%
ATTGGATATCCAATTCAAGA+GGG - chr1_4:8149915-8149934 Msa0147990:intron 30.0%
TCAATGTTGTTCTTATTGGT+TGG - chr1_4:8150013-8150032 Msa0147990:intron 30.0%
AAGGTCTAAATAGTAATCAC+TGG + chr1_4:8150438-8150457 None:intergenic 30.0%
!! ATTTGTCAGGATTTGAGTTT+TGG - chr1_4:8150493-8150512 Msa0147990:intron 30.0%
!! TGGTCTTAACATTGTTTTGT+TGG - chr1_4:8150513-8150532 Msa0147990:intron 30.0%
!! ACATTGTTTTGTTGGCATAA+TGG - chr1_4:8150521-8150540 Msa0147990:intron 30.0%
ACAAGTTTGAATTCGAAAGT+CGG + chr1_4:8150579-8150598 None:intergenic 30.0%
AAGACAGCAATTAATTGACA+AGG + chr1_4:8150731-8150750 None:intergenic 30.0%
! TTGGGATTTTATAAGTGTAG+CGG - chr1_4:8150840-8150859 Msa0147990:CDS 30.0%
AAAAATAGGCTTAGATGGTT+TGG - chr1_4:8150972-8150991 Msa0147990:intron 30.0%
AAAATAGGCTTAGATGGTTT+GGG - chr1_4:8150973-8150992 Msa0147990:intron 30.0%
!! ACTCAGTTATTTCTCTCTTT+AGG - chr1_4:8151169-8151188 Msa0147990:intron 30.0%
TAATCCTTAATTGTTCCCAA+TGG + chr1_4:8151312-8151331 None:intergenic 30.0%
CATTCCATATGTGTGATATT+AGG + chr1_4:8151356-8151375 None:intergenic 30.0%
GAATGAGTTAACATGTCATT+AGG - chr1_4:8151433-8151452 Msa0147990:intron 30.0%
AATGTGAGTTTGATCATTCA+TGG - chr1_4:8151483-8151502 Msa0147990:intron 30.0%
! ACACTATGTTCTTTTGTTAG+AGG - chr1_4:8151757-8151776 Msa0147990:intron 30.0%
! GCCATTATACATGAACATTT+TGG - chr1_4:8151804-8151823 Msa0147990:intron 30.0%
TGGTATTAAAGCAAACACAA+CGG - chr1_4:8151824-8151843 Msa0147990:intron 30.0%
AACTTGATTATGAAGGATGA+TGG - chr1_4:8151864-8151883 Msa0147990:intron 30.0%
TCAAGTAAAGGCTCAATAAT+AGG - chr1_4:8151971-8151990 Msa0147990:intron 30.0%
CATGAAAAGTTGGAAATAGA+TGG - chr1_4:8152008-8152027 Msa0147990:intron 30.0%
!! ATGGAACATATCTGAGATTT+TGG - chr1_4:8152027-8152046 Msa0147990:intron 30.0%
ATGCTGAAGAAGTAGTATAT+TGG + chr1_4:8152062-8152081 None:intergenic 30.0%
AAGCGAATAATTTCTGTTAC+AGG + chr1_4:8152303-8152322 None:intergenic 30.0%
CAAGGAGAATTCTGTTATAT+AGG + chr1_4:8152356-8152375 None:intergenic 30.0%
AGGAAATTCATAAGGGATTA+TGG + chr1_4:8152463-8152482 None:intergenic 30.0%
TCACAGTAGGAAATTCATAA+GGG + chr1_4:8152470-8152489 None:intergenic 30.0%
AACATGTTAAAGGAGTAACA+TGG + chr1_4:8152510-8152529 None:intergenic 30.0%
! GTTACTCCTTTAACATGTTT+TGG - chr1_4:8152511-8152530 Msa0147990:CDS 30.0%
CATGTTGAGGAAATTCATTA+TGG + chr1_4:8152793-8152812 None:intergenic 30.0%
CATAATGAATTTCCTCAACA+TGG - chr1_4:8152791-8152810 Msa0147990:intron 30.0%
GAACACTTAGTAAATCCATT+TGG + chr1_4:8152870-8152889 None:intergenic 30.0%
!! ATGATGTCTAAATGCTGTTT+TGG - chr1_4:8152902-8152921 Msa0147990:intron 30.0%
!!! TGATGTCTAAATGCTGTTTT+GGG - chr1_4:8152903-8152922 Msa0147990:intron 30.0%
! TGGTACCCTTAATTTAAGTT+AGG - chr1_4:8152954-8152973 Msa0147990:intron 30.0%
CCAAGCCTAACTTAAATTAA+GGG + chr1_4:8152962-8152981 None:intergenic 30.0%
TCCAAGCCTAACTTAAATTA+AGG + chr1_4:8152963-8152982 None:intergenic 30.0%
CAATATGATTGTCAACAGAA+GGG + chr1_4:8153044-8153063 None:intergenic 30.0%
TCAATATGATTGTCAACAGA+AGG + chr1_4:8153045-8153064 None:intergenic 30.0%
!! TGGATTTGTTAGCTTCTAAT+GGG + chr1_4:8153258-8153277 None:intergenic 30.0%
!! ATGGATTTGTTAGCTTCTAA+TGG + chr1_4:8153259-8153278 None:intergenic 30.0%
TGATTTAGATGGCATAAATG+TGG + chr1_4:8153290-8153309 None:intergenic 30.0%
CATTGAATAAGGAGAAATGA+AGG + chr1_4:8153333-8153352 None:intergenic 30.0%
TCCTTATTCAATGATCATTC+AGG - chr1_4:8153340-8153359 Msa0147990:intron 30.0%
CCTTATTCAATGATCATTCA+GGG - chr1_4:8153341-8153360 Msa0147990:intron 30.0%
TACATCTACCATTATGAGAA+TGG - chr1_4:8153433-8153452 Msa0147990:intron 30.0%
ACATCTACCATTATGAGAAT+GGG - chr1_4:8153434-8153453 Msa0147990:intron 30.0%
TCTTGAAAAAGTGAATGGTT+GGG - chr1_4:8153940-8153959 Msa0147990:intron 30.0%
ATTGGAAATAAACCTTTGCA+CGG - chr1_4:8154018-8154037 Msa0147990:intron 30.0%
ATGAAATGGTGAATCTCAAA+TGG + chr1_4:8154273-8154292 None:intergenic 30.0%
TTCTCAGTTATACTGTCATT+TGG + chr1_4:8154425-8154444 None:intergenic 30.0%
ATGACAGTATAACTGAGAAA+AGG - chr1_4:8154426-8154445 Msa0147990:intron 30.0%
! AGGAATGATAGTGTTATTGA+CGG - chr1_4:8154474-8154493 Msa0147990:intron 30.0%
!! TACTGCAAAATCTGCTATTT+TGG + chr1_4:8154545-8154564 None:intergenic 30.0%
!! ATTTTCAGTCATCTGGAATT+TGG - chr1_4:8154612-8154631 Msa0147990:intron 30.0%
GAATATAAAAGGGGTAGAAT+CGG - chr1_4:8154786-8154805 Msa0147990:intron 30.0%
AATGCATATTCTTAAGTCAC+TGG - chr1_4:8155197-8155216 Msa0147990:intron 30.0%
TTTATACAGGAAGTCAGAAA+CGG + chr1_4:8155378-8155397 None:intergenic 30.0%
! TCCTGATTTTACATGTATGT+AGG - chr1_4:8155406-8155425 Msa0147990:intron 30.0%
AAACAATTTAGAGGAATGCT+AGG - chr1_4:8155441-8155460 Msa0147990:intron 30.0%
GATTTCTACACAAGTTACAA+TGG + chr1_4:8155683-8155702 None:intergenic 30.0%
TTGCGATTAACTAACAAGTT+AGG + chr1_4:8155736-8155755 None:intergenic 30.0%
AATTGGTAAGAAAGTCCTAA+AGG + chr1_4:8155803-8155822 None:intergenic 30.0%
!!! TATATTGACCAGGTTTTGTT+AGG - chr1_4:8155950-8155969 Msa0147990:intron 30.0%
TCAATCCTATCTGTTGTAAT+TGG - chr1_4:8155998-8156017 Msa0147990:intron 30.0%
CTAAAGACATACTGAAATAC+AGG + chr1_4:8156102-8156121 None:intergenic 30.0%
TTGATATTATGTGGATGAGT+TGG - chr1_4:8156223-8156242 Msa0147990:intron 30.0%
CACTTTGATTAGAGAGAAAA+AGG + chr1_4:8156824-8156843 None:intergenic 30.0%
AATATAGATTCACCATCCAT+TGG - chr1_4:8156845-8156864 Msa0147990:CDS 30.0%
!! TTCTAAAATCCACTTTCCAA+TGG + chr1_4:8156864-8156883 None:intergenic 30.0%
GTTTATAAAGATGCTGAACA+GGG + chr1_4:8156915-8156934 None:intergenic 30.0%
AGTTTATAAAGATGCTGAAC+AGG + chr1_4:8156916-8156935 None:intergenic 30.0%
! CATCTTCAATAAGCAGTTTT+TGG - chr1_4:8156991-8157010 Msa0147990:intron 30.0%
AATAGCGAAGAAAGATTGAT+AGG + chr1_4:8157024-8157043 None:intergenic 30.0%
CCTTCAAAGGATGTTAAAAA+CGG - chr1_4:8157262-8157281 Msa0147990:intron 30.0%
AACCAGACATTGTTATACAT+GGG + chr1_4:8157357-8157376 None:intergenic 30.0%
AAACTTGACAATAAGAGAAC+GGG + chr1_4:8157524-8157543 None:intergenic 30.0%
ATATGTTTGGATGGGATATA+TGG - chr1_4:8157568-8157587 Msa0147990:intron 30.0%
!!! GTCTTGTATTTTTTGCTGTA+AGG - chr1_4:8157717-8157736 Msa0147990:intron 30.0%
AGTAATACTGAAATGTTGAG+GGG + chr1_4:8157897-8157916 None:intergenic 30.0%
TCAGAATCAAGCATTTGTAT+TGG - chr1_4:8157970-8157989 Msa0147990:intron 30.0%
TTAAGCTATTTATCCAAGCA+TGG - chr1_4:8158372-8158391 Msa0147990:intron 30.0%
AGATTAATATAGACCATGCT+TGG + chr1_4:8158388-8158407 None:intergenic 30.0%
TTATTCTTTACAGTCTCCTT+GGG - chr1_4:8158418-8158437 Msa0147990:intron 30.0%
!! TTTCTGAAATGTAGTTAGCA+AGG + chr1_4:8158511-8158530 None:intergenic 30.0%
AACTCACTTTATCTTTCATC+AGG - chr1_4:8158590-8158609 Msa0147990:intron 30.0%
!! TTTCATCAGGTTGGTTATTT+GGG - chr1_4:8158603-8158622 Msa0147990:intron 30.0%
TATCATTGATGGAAATAAGG+AGG - chr1_4:8158716-8158735 Msa0147990:intron 30.0%
TTTCTATGTTCTCTCATCAT+TGG + chr1_4:8158762-8158781 None:intergenic 30.0%
!! ATGTCAATAATTTGCTCCTA+AGG + chr1_4:8158823-8158842 None:intergenic 30.0%
TTAGGAGCAAATTATTGACA+TGG - chr1_4:8158822-8158841 Msa0147990:CDS 30.0%
! TTATGTGTGGTTGGGATTTT+GGG + chr1_4:8149590-8149609 None:intergenic 35.0%
! TTTATGTGTGGTTGGGATTT+TGG + chr1_4:8149591-8149610 None:intergenic 35.0%
CCAGAGAAATAAGTACAAGA+TGG + chr1_4:8149741-8149760 None:intergenic 35.0%
! CCATCTTGTACTTATTTCTC+TGG - chr1_4:8149738-8149757 Msa0147990:three_prime_UTR 35.0%
!! TGTTATGTTCTGGAAAGTAC+TGG - chr1_4:8149866-8149885 Msa0147990:CDS 35.0%
ATGCTAAGATTCTGTGCAAT+TGG - chr1_4:8149897-8149916 Msa0147990:CDS 35.0%
AGTAAGATGCAGACAGAAAT+CGG - chr1_4:8150240-8150259 Msa0147990:intron 35.0%
CAAGCATCAAATATTAGCGT+TGG - chr1_4:8150295-8150314 Msa0147990:intron 35.0%
! ATCAAATATTAGCGTTGGAC+CGG - chr1_4:8150300-8150319 Msa0147990:intron 35.0%
AATTTCTGTCAGAGACATTC+TGG + chr1_4:8150357-8150376 None:intergenic 35.0%
TGACAAATTCCTAAGCTACT+TGG + chr1_4:8150481-8150500 None:intergenic 35.0%
AAGTAGCTTAGGAATTTGTC+AGG - chr1_4:8150480-8150499 Msa0147990:intron 35.0%
AAGTTTGAATTCGAAAGTCG+GGG + chr1_4:8150577-8150596 None:intergenic 35.0%
CAAGTTTGAATTCGAAAGTC+GGG + chr1_4:8150578-8150597 None:intergenic 35.0%
ATTGACAAGGAGAAAGAGTA+TGG + chr1_4:8150718-8150737 None:intergenic 35.0%
CTAGTTGTCAGAAATGTTAG+TGG - chr1_4:8150777-8150796 Msa0147990:intron 35.0%
TTGTCAGAAATGTTAGTGGA+AGG - chr1_4:8150781-8150800 Msa0147990:intron 35.0%
AGACTAGACATGATAGGATT+AGG - chr1_4:8150893-8150912 Msa0147990:intron 35.0%
AGCACCTATAGTAGAAAAGT+TGG - chr1_4:8150945-8150964 Msa0147990:intron 35.0%
ATGGTGTATGATAGAACACT+AGG - chr1_4:8151061-8151080 Msa0147990:intron 35.0%
TGGTGTATGATAGAACACTA+GGG - chr1_4:8151062-8151081 Msa0147990:intron 35.0%
!! CAGTTATTTCTCTCTTTAGG+AGG - chr1_4:8151172-8151191 Msa0147990:intron 35.0%
TATGAGACATATTGCATGGA+GGG + chr1_4:8151207-8151226 None:intergenic 35.0%
TCCCAATGGTGATATGAATA+CGG + chr1_4:8151298-8151317 None:intergenic 35.0%
ATCACCATTGGGAACAATTA+AGG - chr1_4:8151305-8151324 Msa0147990:CDS 35.0%
!! TCTATAGCTTTTGTGCTGTT+TGG - chr1_4:8151583-8151602 Msa0147990:intron 35.0%
TCACTAATAGCGTTTGTGAA+AGG - chr1_4:8151622-8151641 Msa0147990:intron 35.0%
!! TGGCCGTTTTATACTTAAGT+AGG + chr1_4:8151788-8151807 None:intergenic 35.0%
TAAGAGTTTCTATGACCAAG+TGG + chr1_4:8151913-8151932 None:intergenic 35.0%
GCATCTCAAAGATCAAATCA+TGG - chr1_4:8152078-8152097 Msa0147990:intron 35.0%
CTCAAAGATCAAATCATGGT+CGG - chr1_4:8152082-8152101 Msa0147990:intron 35.0%
GTAGAGAGTTATCTATTCTC+TGG + chr1_4:8152281-8152300 None:intergenic 35.0%
ATGAGAAGAAATACAGTGCA+AGG + chr1_4:8152374-8152393 None:intergenic 35.0%
GTCACAGTAGGAAATTCATA+AGG + chr1_4:8152471-8152490 None:intergenic 35.0%
AAAGGAGTAACATGGTTTCT+CGG + chr1_4:8152502-8152521 None:intergenic 35.0%
CTCATCCCAAAACATGTTAA+AGG + chr1_4:8152520-8152539 None:intergenic 35.0%
AAATCTTCTGTGTTGTACTC+CGG + chr1_4:8152646-8152665 None:intergenic 35.0%
! CATATGTAAGTGTTGCAAGA+GGG - chr1_4:8152725-8152744 Msa0147990:intron 35.0%
ATTCATGAGTGCTTGAAAAG+TGG - chr1_4:8152827-8152846 Msa0147990:intron 35.0%
TGGATTTACTAAGTGTTCGT+AGG - chr1_4:8152872-8152891 Msa0147990:intron 35.0%
GGATTTACTAAGTGTTCGTA+GGG - chr1_4:8152873-8152892 Msa0147990:intron 35.0%
ACAGCATTTAGACATCATGA+GGG + chr1_4:8152900-8152919 None:intergenic 35.0%
AACAGCATTTAGACATCATG+AGG + chr1_4:8152901-8152920 None:intergenic 35.0%
! CCCTTAATTTAAGTTAGGCT+TGG - chr1_4:8152959-8152978 Msa0147990:intron 35.0%
CGACTTAAGCATGTTATAGA+AGG + chr1_4:8153115-8153134 None:intergenic 35.0%
! GAAAGAAAAGTGGTAATGTG+AGG + chr1_4:8153165-8153184 None:intergenic 35.0%
GTTCCAATTTAACACCAAGT+GGG + chr1_4:8153200-8153219 None:intergenic 35.0%
! ATTTGTTAGCTTCTAATGGG+GGG + chr1_4:8153255-8153274 None:intergenic 35.0%
!! GATTTGTTAGCTTCTAATGG+GGG + chr1_4:8153256-8153275 None:intergenic 35.0%
!! GGATTTGTTAGCTTCTAATG+GGG + chr1_4:8153257-8153276 None:intergenic 35.0%
!! CATAAATGTGGTAATGGGTA+TGG + chr1_4:8153278-8153297 None:intergenic 35.0%
GATGGCATAAATGTGGTAAT+GGG + chr1_4:8153283-8153302 None:intergenic 35.0%
AGATGGCATAAATGTGGTAA+TGG + chr1_4:8153284-8153303 None:intergenic 35.0%
!! GCTTTGCTGTTTGATTTAGA+TGG + chr1_4:8153301-8153320 None:intergenic 35.0%
AAGGAGAAATGAAGGTTAGT+GGG + chr1_4:8153325-8153344 None:intergenic 35.0%
TAAGGAGAAATGAAGGTTAG+TGG + chr1_4:8153326-8153345 None:intergenic 35.0%
CCCTGAATGATCATTGAATA+AGG + chr1_4:8153344-8153363 None:intergenic 35.0%
ATTGAGCATCAAAATGAAGG+AGG + chr1_4:8153605-8153624 None:intergenic 35.0%
CCAATTGAGCATCAAAATGA+AGG + chr1_4:8153608-8153627 None:intergenic 35.0%
!! CCTTCATTTTGATGCTCAAT+TGG - chr1_4:8153605-8153624 Msa0147990:CDS 35.0%
! CTCTTTCCTGAGATCTATTT+TGG - chr1_4:8153752-8153771 Msa0147990:intron 35.0%
CTCGGATCAACTAATAATAC+CGG + chr1_4:8153855-8153874 None:intergenic 35.0%
TTGATCCGAGTGTATGAATT+CGG - chr1_4:8153865-8153884 Msa0147990:intron 35.0%
TAGGGTCTTGAAAAAGTGAA+TGG - chr1_4:8153935-8153954 Msa0147990:intron 35.0%
GTCTTGAAAAAGTGAATGGT+TGG - chr1_4:8153939-8153958 Msa0147990:intron 35.0%
ATTTCCAATTTCAAGACACG+AGG + chr1_4:8154007-8154026 None:intergenic 35.0%
TTGGAAATAAACCTTTGCAC+GGG - chr1_4:8154019-8154038 Msa0147990:intron 35.0%
TCACAGTGAACATTGGAATT+TGG - chr1_4:8154061-8154080 Msa0147990:intron 35.0%
ATGAGCTCAGGAAAATGAAA+TGG + chr1_4:8154287-8154306 None:intergenic 35.0%
! ATTTTCCTGAGCTCATACTT+TGG - chr1_4:8154291-8154310 Msa0147990:intron 35.0%
!! GTCATTTGGTTTGCGAAAAA+TGG + chr1_4:8154411-8154430 None:intergenic 35.0%
!!! TGCAAAATCTGCTATTTTGG+AGG + chr1_4:8154542-8154561 None:intergenic 35.0%
! GCAGATTTTGCAGTAACAAA+AGG - chr1_4:8154550-8154569 Msa0147990:intron 35.0%
! TAGTCACATTTTCAGTCATC+TGG - chr1_4:8154605-8154624 Msa0147990:intron 35.0%
ATTCTTTATTGCTGCACTCT+TGG - chr1_4:8154892-8154911 Msa0147990:intron 35.0%
TTGGCAATGCAATATGAGAA+GGG - chr1_4:8154911-8154930 Msa0147990:intron 35.0%
AATGCAATATGAGAAGGGAT+TGG - chr1_4:8154916-8154935 Msa0147990:intron 35.0%
! ATAAGTACTGTAGTGAAAGC+TGG + chr1_4:8154986-8155005 None:intergenic 35.0%
! CAAATTCGCTAGTCTATAAC+AGG + chr1_4:8155104-8155123 None:intergenic 35.0%
TTTCCTGTGTACTTTCATGA+CGG - chr1_4:8155128-8155147 Msa0147990:intron 35.0%
!!! TGGAGTGAAGTTGTTTTTCT+AGG + chr1_4:8155352-8155371 None:intergenic 35.0%
CATGTAAAATCAGGAATGCA+TGG + chr1_4:8155401-8155420 None:intergenic 35.0%
GCCTACATACATGTAAAATC+AGG + chr1_4:8155410-8155429 None:intergenic 35.0%
! TCCAACACACTCTTTTTGAT+TGG - chr1_4:8155487-8155506 Msa0147990:intron 35.0%
! ACCAATCAAAAAGAGTGTGT+TGG + chr1_4:8155491-8155510 None:intergenic 35.0%
!! TAGCTATTCTGGAGATCTTT+TGG - chr1_4:8155558-8155577 Msa0147990:intron 35.0%
! ATCTAGCTTCATACTCCTTT+AGG - chr1_4:8155785-8155804 Msa0147990:intron 35.0%
!!! CAGGTTTTGTTAGGATCAAT+GGG - chr1_4:8155959-8155978 Msa0147990:intron 35.0%
CCTATTCGAACTTACTTGTT+TGG + chr1_4:8156054-8156073 None:intergenic 35.0%
CCAAACAAGTAAGTTCGAAT+AGG - chr1_4:8156051-8156070 Msa0147990:intron 35.0%
TGAAATTGTGATAGTAGACG+AGG + chr1_4:8156480-8156499 None:intergenic 35.0%
TTTGTCGAGTAAACCAACAA+GGG + chr1_4:8156531-8156550 None:intergenic 35.0%
CAAATCAAGAATGTATGCCT+AGG - chr1_4:8156568-8156587 Msa0147990:intron 35.0%
!! TTAGTTTTTATCTCCTTGCC+AGG - chr1_4:8156682-8156701 Msa0147990:intron 35.0%
AAAATCCACTTTCCAATGGA+TGG + chr1_4:8156860-8156879 None:intergenic 35.0%
! TGTAACTTGCATTCAACTCT+GGG + chr1_4:8156888-8156907 None:intergenic 35.0%
!! CCGTTTTTAACATCCTTTGA+AGG + chr1_4:8157265-8157284 None:intergenic 35.0%
ATCCCATGTATAACAATGTC+TGG - chr1_4:8157352-8157371 Msa0147990:intron 35.0%
CAACCAGACATTGTTATACA+TGG + chr1_4:8157358-8157377 None:intergenic 35.0%
TTTCTTAGGGAAATGCTAAC+AGG - chr1_4:8157386-8157405 Msa0147990:intron 35.0%
TTCTTAGGGAAATGCTAACA+GGG - chr1_4:8157387-8157406 Msa0147990:intron 35.0%
GGTTATGTTAAGTGTCCTAA+GGG + chr1_4:8157503-8157522 None:intergenic 35.0%
! ACAGTTCGGTGATATATGTT+TGG - chr1_4:8157555-8157574 Msa0147990:intron 35.0%
TTCGGTGATATATGTTTGGA+TGG - chr1_4:8157559-8157578 Msa0147990:intron 35.0%
TCGGTGATATATGTTTGGAT+GGG - chr1_4:8157560-8157579 Msa0147990:intron 35.0%
CATTTATACCTCTAACCATG+TGG - chr1_4:8157628-8157647 Msa0147990:intron 35.0%
!!! GAAGATATTTTGGAACCACA+TGG + chr1_4:8157646-8157665 None:intergenic 35.0%
TGTGGTTCCAAAATATCTTC+AGG - chr1_4:8157646-8157665 Msa0147990:intron 35.0%
CAAATCCTCTTGAGATTCTT+TGG - chr1_4:8157684-8157703 Msa0147990:intron 35.0%
GATTTCCAAAGAATCTCAAG+AGG + chr1_4:8157692-8157711 None:intergenic 35.0%
TTGCTTTATATGGGCCTATT+TGG - chr1_4:8158130-8158149 Msa0147990:intron 35.0%
TTATATGGGCCTATTTGGAT+TGG - chr1_4:8158135-8158154 Msa0147990:intron 35.0%
TCAAACATGCCAATCCAAAT+AGG + chr1_4:8158147-8158166 None:intergenic 35.0%
CTTATTCTTTACAGTCTCCT+TGG - chr1_4:8158417-8158436 Msa0147990:intron 35.0%
TATTCTTTACAGTCTCCTTG+GGG - chr1_4:8158419-8158438 Msa0147990:intron 35.0%
CACTTTATCTTTCATCAGGT+TGG - chr1_4:8158594-8158613 Msa0147990:intron 35.0%
!! CTTTCATCAGGTTGGTTATT+TGG - chr1_4:8158602-8158621 Msa0147990:intron 35.0%
TCAAAAAACACCGAAAAAGG+TGG + chr1_4:8158658-8158677 None:intergenic 35.0%
GCAAATTATTGACATGGTGA+TGG - chr1_4:8158828-8158847 Msa0147990:CDS 35.0%
TCGAATGTTCTGCTAAGCTA+AGG + chr1_4:8149528-8149547 None:intergenic 40.0%
TCATACACCCTTGATTCCAA+AGG - chr1_4:8149677-8149696 Msa0147990:three_prime_UTR 40.0%
CATACACCCTTGATTCCAAA+GGG - chr1_4:8149678-8149697 Msa0147990:three_prime_UTR 40.0%
!!! GGTTTTCCCTTTGGAATCAA+GGG + chr1_4:8149687-8149706 None:intergenic 40.0%
!!! AGGTTTTCCCTTTGGAATCA+AGG + chr1_4:8149688-8149707 None:intergenic 40.0%
TGGATTTGACCCTCTTGAAT+TGG + chr1_4:8149927-8149946 None:intergenic 40.0%
CTAAATTAGCCCACCCAAAT+TGG + chr1_4:8150106-8150125 None:intergenic 40.0%
GTAAGATGCAGACAGAAATC+GGG - chr1_4:8150241-8150260 Msa0147990:intron 40.0%
TAAGATGCAGACAGAAATCG+GGG - chr1_4:8150242-8150261 Msa0147990:intron 40.0%
TTGTGCTCGAATTGTTTCAC+GGG + chr1_4:8150278-8150297 None:intergenic 40.0%
CTTGTGCTCGAATTGTTTCA+CGG + chr1_4:8150279-8150298 None:intergenic 40.0%
! TCAAATATTAGCGTTGGACC+GGG - chr1_4:8150301-8150320 Msa0147990:intron 40.0%
TTATTGCTTCCATAATCCCC+CGG + chr1_4:8150322-8150341 None:intergenic 40.0%
CATCTCACTAGCACATGTAA+AGG + chr1_4:8150457-8150476 None:intergenic 40.0%
GCTGTTATCAAATTGGAGCT+TGG - chr1_4:8150632-8150651 Msa0147990:intron 40.0%
! TTTACTCTTGGATTGGATGC+TGG - chr1_4:8150813-8150832 Msa0147990:CDS 40.0%
! TTACTCTTGGATTGGATGCT+GGG - chr1_4:8150814-8150833 Msa0147990:CDS 40.0%
! TTATAAGTGTAGCGGAGATG+AGG - chr1_4:8150848-8150867 Msa0147990:CDS 40.0%
TGACCTCTAAATCCTTACGA+CGG + chr1_4:8151024-8151043 None:intergenic 40.0%
GGATTTAGAGGTCAATGAGT+TGG - chr1_4:8151030-8151049 Msa0147990:intron 40.0%
GTTCTATCATACACCATACG+TGG + chr1_4:8151058-8151077 None:intergenic 40.0%
CGTAATTTGATCCATGTAGC+CGG - chr1_4:8151085-8151104 Msa0147990:intron 40.0%
! AAGCTTTATCCCACTAAGTG+GGG + chr1_4:8151111-8151130 None:intergenic 40.0%
! CAAGCTTTATCCCACTAAGT+GGG + chr1_4:8151112-8151131 None:intergenic 40.0%
GTATGAGACATATTGCATGG+AGG + chr1_4:8151208-8151227 None:intergenic 40.0%
CCAGTATGAGACATATTGCA+TGG + chr1_4:8151211-8151230 None:intergenic 40.0%
CCATGCAATATGTCTCATAC+TGG - chr1_4:8151208-8151227 Msa0147990:CDS 40.0%
! TTCTGTATCTCTTTTGTCCC+AGG + chr1_4:8151243-8151262 None:intergenic 40.0%
GCCGTATTCATATCACCATT+GGG - chr1_4:8151294-8151313 Msa0147990:CDS 40.0%
TGTGTGATATTAGGGAGCAA+GGG + chr1_4:8151347-8151366 None:intergenic 40.0%
ATGTGTGATATTAGGGAGCA+AGG + chr1_4:8151348-8151367 None:intergenic 40.0%
GCTCCCTAATATCACACATA+TGG - chr1_4:8151349-8151368 Msa0147990:intron 40.0%
AAAGCTATAGAGACGGGATA+AGG + chr1_4:8151574-8151593 None:intergenic 40.0%
AGCACAAAAGCTATAGAGAC+GGG + chr1_4:8151580-8151599 None:intergenic 40.0%
CAGCACAAAAGCTATAGAGA+CGG + chr1_4:8151581-8151600 None:intergenic 40.0%
CTAATAGCGTTTGTGAAAGG+AGG - chr1_4:8151625-8151644 Msa0147990:intron 40.0%
ATTGCTGCAAGAACTGATGA+AGG + chr1_4:8151652-8151671 None:intergenic 40.0%
CTTGCAGCAATTGCAAAATC+AGG - chr1_4:8151661-8151680 Msa0147990:intron 40.0%
!! TGTTTCTGAAATCGGTGACA+AGG - chr1_4:8151711-8151730 Msa0147990:intron 40.0%
AGATCAAACTCTTCTCCACT+TGG - chr1_4:8151895-8151914 Msa0147990:intron 40.0%
AACCAGATCGCTGTATAACA+TGG - chr1_4:8152149-8152168 Msa0147990:intron 40.0%
TTCCATGTTATACAGCGATC+TGG + chr1_4:8152154-8152173 None:intergenic 40.0%
GAGAGTTATCTATTCTCTGG+AGG + chr1_4:8152278-8152297 None:intergenic 40.0%
GGAATCAAGTAAGTAGAGAG+GGG + chr1_4:8152334-8152353 None:intergenic 40.0%
GGGAATCAAGTAAGTAGAGA+GGG + chr1_4:8152335-8152354 None:intergenic 40.0%
AGGGAATCAAGTAAGTAGAG+AGG + chr1_4:8152336-8152355 None:intergenic 40.0%
GCAGGAAAGGAATAATGAGA+CGG + chr1_4:8152407-8152426 None:intergenic 40.0%
CATAAGGGATTATGGCAAGT+TGG + chr1_4:8152455-8152474 None:intergenic 40.0%
ACTACCCTTTCCTTGCAAAA+TGG - chr1_4:8152618-8152637 Msa0147990:intron 40.0%
CTACCCTTTCCTTGCAAAAT+GGG - chr1_4:8152619-8152638 Msa0147990:intron 40.0%
TACCCTTTCCTTGCAAAATG+GGG - chr1_4:8152620-8152639 Msa0147990:intron 40.0%
CCTCTTGCAACACTTACATA+TGG + chr1_4:8152727-8152746 None:intergenic 40.0%
! CCATATGTAAGTGTTGCAAG+AGG - chr1_4:8152724-8152743 Msa0147990:intron 40.0%
AAGTCTTCAAACCCATGTTG+AGG + chr1_4:8152806-8152825 None:intergenic 40.0%
ATGAGTGCTTGAAAAGTGGA+TGG - chr1_4:8152831-8152850 Msa0147990:intron 40.0%
CAGCATTTAGACATCATGAG+GGG + chr1_4:8152899-8152918 None:intergenic 40.0%
!! TTAAGGGTACCACAAAGTGA+GGG + chr1_4:8152946-8152965 None:intergenic 40.0%
!! ATTAAGGGTACCACAAAGTG+AGG + chr1_4:8152947-8152966 None:intergenic 40.0%
CTTCTATTGGGTGAGTTGTA+CGG + chr1_4:8152998-8153017 None:intergenic 40.0%
!! ACAGAAGGGTATTTCTCACA+GGG + chr1_4:8153030-8153049 None:intergenic 40.0%
!! AACAGAAGGGTATTTCTCAC+AGG + chr1_4:8153031-8153050 None:intergenic 40.0%
AGAAATACCCTTCTGTTGAC+AGG - chr1_4:8153034-8153053 Msa0147990:intron 40.0%
GGTTCCAATTTAACACCAAG+TGG + chr1_4:8153201-8153220 None:intergenic 40.0%
ATTAGGCAAAACATGCGATG+GGG + chr1_4:8153222-8153241 None:intergenic 40.0%
GATTAGGCAAAACATGCGAT+GGG + chr1_4:8153223-8153242 None:intergenic 40.0%
TGATTAGGCAAAACATGCGA+TGG + chr1_4:8153224-8153243 None:intergenic 40.0%
!! ACTTCATCTCCAAGAGTGTT+GGG + chr1_4:8153401-8153420 None:intergenic 40.0%
! AACTTCATCTCCAAGAGTGT+TGG + chr1_4:8153402-8153421 None:intergenic 40.0%
CCACAAATGATGAGCTCAAA+GGG + chr1_4:8153475-8153494 None:intergenic 40.0%
TCCCTGCAAACAAGTAGTTA+AGG - chr1_4:8153506-8153525 Msa0147990:intron 40.0%
GCCTTAACTACTTGTTTGCA+GGG + chr1_4:8153510-8153529 None:intergenic 40.0%
AGCCTTAACTACTTGTTTGC+AGG + chr1_4:8153511-8153530 None:intergenic 40.0%
CATCAAAATGAAGGAGGAGA+AGG + chr1_4:8153599-8153618 None:intergenic 40.0%
AAAGGACTCTGTTACAAGTG+TGG + chr1_4:8153667-8153686 None:intergenic 40.0%
TGTGAGACATTCATCCTACT+AGG + chr1_4:8153710-8153729 None:intergenic 40.0%
! GGATGAATGTCTCACACTTT+TGG - chr1_4:8153714-8153733 Msa0147990:intron 40.0%
CTAGCACCAAAATAGATCTC+AGG + chr1_4:8153761-8153780 None:intergenic 40.0%
!!! GAGCGATTGGTTTTACGTTT+GGG + chr1_4:8153820-8153839 None:intergenic 40.0%
!!! CTTTTTCAAGACCCTATGCT+GGG + chr1_4:8153931-8153950 None:intergenic 40.0%
!!! ACTTTTTCAAGACCCTATGC+TGG + chr1_4:8153932-8153951 None:intergenic 40.0%
GGGATATTCACAGTGAACAT+TGG - chr1_4:8154054-8154073 Msa0147990:intron 40.0%
GAAACTTTGTGCAGTCTTCA+GGG + chr1_4:8154133-8154152 None:intergenic 40.0%
GATCGGTAACAGTGAGAAAT+CGG + chr1_4:8154176-8154195 None:intergenic 40.0%
TCTGCAAAATGAATTGCCTC+TGG - chr1_4:8154212-8154231 Msa0147990:intron 40.0%
CTGCAAAATGAATTGCCTCT+GGG - chr1_4:8154213-8154232 Msa0147990:intron 40.0%
! TCAAATGGACTCGTGTCAAT+AGG + chr1_4:8154258-8154277 None:intergenic 40.0%
TCTGCTAAAACGTTGATCCT+TGG - chr1_4:8154341-8154360 Msa0147990:intron 40.0%
! TGATAGTGTTATTGACGGTG+AGG - chr1_4:8154479-8154498 Msa0147990:intron 40.0%
! GATAGTGTTATTGACGGTGA+GGG - chr1_4:8154480-8154499 Msa0147990:intron 40.0%
TAAAAGGGGTAGAATCGGTA+AGG - chr1_4:8154791-8154810 Msa0147990:intron 40.0%
GTGCAGCAATAAAGAATGTC+TGG + chr1_4:8154889-8154908 None:intergenic 40.0%
CTTGGCAATGCAATATGAGA+AGG - chr1_4:8154910-8154929 Msa0147990:intron 40.0%
TCTACTAGGCTATGTGGTAA+AGG - chr1_4:8155153-8155172 Msa0147990:intron 40.0%
CAGGAATGCATGGTTTATAC+AGG + chr1_4:8155391-8155410 None:intergenic 40.0%
TATATGGGACCCACATGATT+TGG + chr1_4:8155534-8155553 None:intergenic 40.0%
CCATTGATCCTAACAAAACC+TGG + chr1_4:8155961-8155980 None:intergenic 40.0%
!!! CCAGGTTTTGTTAGGATCAA+TGG - chr1_4:8155958-8155977 Msa0147990:intron 40.0%
TACGGCCAATTACAACAGAT+AGG + chr1_4:8156006-8156025 None:intergenic 40.0%
!! CAGGCACTGATTGAAAGATA+CGG + chr1_4:8156024-8156043 None:intergenic 40.0%
! TTACTTGTTTGGAACTGAGC+AGG + chr1_4:8156043-8156062 None:intergenic 40.0%
TCTTTGTTCTGCATTCTCTC+TGG - chr1_4:8156369-8156388 Msa0147990:intron 40.0%
! GGAGAAAAAGGAACTTTTGG+CGG + chr1_4:8156450-8156469 None:intergenic 40.0%
! AGCGGAGAAAAAGGAACTTT+TGG + chr1_4:8156453-8156472 None:intergenic 40.0%
CTTTGTCGAGTAAACCAACA+AGG + chr1_4:8156532-8156551 None:intergenic 40.0%
GAATGTATGCCTAGGAAGTA+TGG - chr1_4:8156576-8156595 Msa0147990:intron 40.0%
AATAGGACTCCATACTTCCT+AGG + chr1_4:8156588-8156607 None:intergenic 40.0%
! AATTTTCGCGAGTCGTTGAA+AGG + chr1_4:8156611-8156630 None:intergenic 40.0%
!! GTTCAACTGGTTTGAGCTAA+GGG + chr1_4:8156736-8156755 None:intergenic 40.0%
!! AGTTCAACTGGTTTGAGCTA+AGG + chr1_4:8156737-8156756 None:intergenic 40.0%
ATTCACCATCCATTGGAAAG+TGG - chr1_4:8156852-8156871 Msa0147990:CDS 40.0%
! CTGTAACTTGCATTCAACTC+TGG + chr1_4:8156889-8156908 None:intergenic 40.0%
AAACTCGGAAAGGCTAACAT+AGG + chr1_4:8156944-8156963 None:intergenic 40.0%
ATTGAAGTGGAAACTCGGAA+AGG + chr1_4:8156954-8156973 None:intergenic 40.0%
GCTCTATTGAAGTGGAAACT+CGG + chr1_4:8156959-8156978 None:intergenic 40.0%
GATCATACGCTCTATTGAAG+TGG + chr1_4:8156967-8156986 None:intergenic 40.0%
! CTGATCTTTTCTGCTTTGTC+TGG - chr1_4:8157148-8157167 Msa0147990:intron 40.0%
TCAGCTAGTTCATCAAGTTC+AGG + chr1_4:8157301-8157320 None:intergenic 40.0%
AGAGGAGCTTGTGAAAGAAA+AGG - chr1_4:8157324-8157343 Msa0147990:intron 40.0%
TCTTAGGGAAATGCTAACAG+GGG - chr1_4:8157388-8157407 Msa0147990:intron 40.0%
AATCCTTAACAAGTGCCCTT+AGG - chr1_4:8157485-8157504 Msa0147990:intron 40.0%
GGGTTATGTTAAGTGTCCTA+AGG + chr1_4:8157504-8157523 None:intergenic 40.0%
!!! TTTTGGAACCACATGGTTAG+AGG + chr1_4:8157639-8157658 None:intergenic 40.0%
! TGCGATGCCTGAAGATATTT+TGG + chr1_4:8157656-8157675 None:intergenic 40.0%
! AATATCTTCAGGCATCGCAA+CGG - chr1_4:8157657-8157676 Msa0147990:intron 40.0%
!! ATTTGCTGACTGATTTGCCT+AGG - chr1_4:8158019-8158038 Msa0147990:intron 40.0%
!! TGACTGATTTGCCTAGGAAT+GGG - chr1_4:8158025-8158044 Msa0147990:intron 40.0%
!! CGATTGTTGCAAGCATTGAA+CGG + chr1_4:8158055-8158074 None:intergenic 40.0%
! GCAACATGCATTGCTATTGT+TGG - chr1_4:8158476-8158495 Msa0147990:intron 40.0%
! ACATGCATTGCTATTGTTGG+AGG - chr1_4:8158479-8158498 Msa0147990:intron 40.0%
! TTTGCCATAGCCACCTTTTT+CGG - chr1_4:8158645-8158664 Msa0147990:intron 40.0%
CACACAAAAAAAGTAGGGCT+TGG + chr1_4:8158687-8158706 None:intergenic 40.0%
TGCGCGCAATATATCATTGA+TGG - chr1_4:8158705-8158724 Msa0147990:intron 40.0%
TGATATCTACCATTAGAGCC+AGG - chr1_4:8158868-8158887 Msa0147990:exon 40.0%
! GAAAGAGGAGGTTTTCCCTT+TGG + chr1_4:8149696-8149715 None:intergenic 45.0%
! GTTGTTCTTATTGGTTGGCC+TGG - chr1_4:8150018-8150037 Msa0147990:intron 45.0%
! CAAATATTAGCGTTGGACCG+GGG - chr1_4:8150302-8150321 Msa0147990:intron 45.0%
! AAATATTAGCGTTGGACCGG+GGG - chr1_4:8150303-8150322 Msa0147990:intron 45.0%
GTGAGATGACCAAGTAGCTT+AGG - chr1_4:8150469-8150488 Msa0147990:intron 45.0%
! AAGGAGAAAGAGTATGGAGG+AGG + chr1_4:8150712-8150731 None:intergenic 45.0%
! GACAAGGAGAAAGAGTATGG+AGG + chr1_4:8150715-8150734 None:intergenic 45.0%
! TGGATTGGATGCTGGGAAAT+TGG - chr1_4:8150821-8150840 Msa0147990:CDS 45.0%
GGATTGGATGCTGGGAAATT+GGG - chr1_4:8150822-8150841 Msa0147990:CDS 45.0%
GCGGTAAGACTAGACATGAT+AGG - chr1_4:8150887-8150906 Msa0147990:intron 45.0%
ACACTATTAGAGCGAGAGTG+CGG - chr1_4:8150920-8150939 Msa0147990:intron 45.0%
ATGCCGTCGTAAGGATTTAG+AGG - chr1_4:8151018-8151037 Msa0147990:intron 45.0%
! CAATGAGTTGGATCCACGTA+TGG - chr1_4:8151042-8151061 Msa0147990:intron 45.0%
! CCAAGCTTTATCCCACTAAG+TGG + chr1_4:8151113-8151132 None:intergenic 45.0%
CCACTTAGTGGGATAAAGCT+TGG - chr1_4:8151110-8151129 Msa0147990:intron 45.0%
GGCCGTATTCATATCACCAT+TGG - chr1_4:8151293-8151312 Msa0147990:CDS 45.0%
GTGTGATATTAGGGAGCAAG+GGG + chr1_4:8151346-8151365 None:intergenic 45.0%
ACGGGATAAGGAATCTGAGT+AGG + chr1_4:8151562-8151581 None:intergenic 45.0%
CAGACCACACGAAGAAAGAT+GGG + chr1_4:8152429-8152448 None:intergenic 45.0%
ACAGACCACACGAAGAAAGA+TGG + chr1_4:8152430-8152449 None:intergenic 45.0%
!! GAAAGGGTAGTAGTGGATCT+TGG + chr1_4:8152609-8152628 None:intergenic 45.0%
TTGCAAGGAAAGGGTAGTAG+TGG + chr1_4:8152616-8152635 None:intergenic 45.0%
GGTGTGATCATCAACCCAAA+TGG - chr1_4:8152852-8152871 Msa0147990:intron 45.0%
CAAAGTGAGGGTAAGGAGTA+TGG + chr1_4:8152934-8152953 None:intergenic 45.0%
TACTCCTTACCCTCACTTTG+TGG - chr1_4:8152934-8152953 Msa0147990:intron 45.0%
GGGGGTTTGACACTTCTATT+GGG + chr1_4:8153010-8153029 None:intergenic 45.0%
AGGGGGTTTGACACTTCTAT+TGG + chr1_4:8153011-8153030 None:intergenic 45.0%
!! AGAAGGGTATTTCTCACAGG+GGG + chr1_4:8153028-8153047 None:intergenic 45.0%
!! CAGAAGGGTATTTCTCACAG+GGG + chr1_4:8153029-8153048 None:intergenic 45.0%
!! ACAGAAGGGTATTTCTCGCA+GGG + chr1_4:8153079-8153098 None:intergenic 45.0%
!! AACAGAAGGGTATTTCTCGC+AGG + chr1_4:8153080-8153099 None:intergenic 45.0%
AATACCCTTCTGTTGACAGG+TGG - chr1_4:8153086-8153105 Msa0147990:intron 45.0%
!!! CTGGCGCTGCAAAGTTTTTT+GGG + chr1_4:8153139-8153158 None:intergenic 45.0%
GAGCTCAAGGGAAAGAAAAG+TGG + chr1_4:8153175-8153194 None:intergenic 45.0%
CCAATTTAACACCAAGTGGG+TGG + chr1_4:8153197-8153216 None:intergenic 45.0%
!! CCACCCACTTGGTGTTAAAT+TGG - chr1_4:8153194-8153213 Msa0147990:intron 45.0%
AGCTTCTAATGGGGGGATAT+GGG + chr1_4:8153248-8153267 None:intergenic 45.0%
TAGCTTCTAATGGGGGGATA+TGG + chr1_4:8153249-8153268 None:intergenic 45.0%
!! TTCATCTCCAAGAGTGTTGG+GGG + chr1_4:8153399-8153418 None:intergenic 45.0%
!! CTTCATCTCCAAGAGTGTTG+GGG + chr1_4:8153400-8153419 None:intergenic 45.0%
CCCTTTGAGCTCATCATTTG+TGG - chr1_4:8153472-8153491 Msa0147990:intron 45.0%
GCCACAAATGATGAGCTCAA+AGG + chr1_4:8153476-8153495 None:intergenic 45.0%
TACCTCAGCAGCCAAGATAT+CGG - chr1_4:8153555-8153574 Msa0147990:intron 45.0%
!! ATTGGCAGTTTGAGCACTGA+TGG - chr1_4:8153623-8153642 Msa0147990:CDS 45.0%
ATCACTGAGAGAAGGCAGAA+AGG + chr1_4:8153685-8153704 None:intergenic 45.0%
TTGGGTCAGAAAGTAGAACC+CGG + chr1_4:8153802-8153821 None:intergenic 45.0%
!!! GGAGCGATTGGTTTTACGTT+TGG + chr1_4:8153821-8153840 None:intergenic 45.0%
ATAATACCGGCCACACACAT+GGG + chr1_4:8153842-8153861 None:intergenic 45.0%
AATAATACCGGCCACACACA+TGG + chr1_4:8153843-8153862 None:intergenic 45.0%
TAGTTGAAACCCAACCCGAA+TGG - chr1_4:8153897-8153916 Msa0147990:intron 45.0%
AGGTATACGCCAATTTGGCT+CGG + chr1_4:8153980-8153999 None:intergenic 45.0%
! GTCAGAGGTATACGCCAATT+TGG + chr1_4:8153985-8154004 None:intergenic 45.0%
ATTTCAAGACACGAGGTCAG+AGG + chr1_4:8154000-8154019 None:intergenic 45.0%
CTGACCTCGTGTCTTGAAAT+TGG - chr1_4:8154000-8154019 Msa0147990:intron 45.0%
CAGTCTTCAGGGAAATGTGT+TGG + chr1_4:8154122-8154141 None:intergenic 45.0%
GGAAACTTTGTGCAGTCTTC+AGG + chr1_4:8154134-8154153 None:intergenic 45.0%
ATCGCACAAAGCAAGGAGAT+CGG + chr1_4:8154193-8154212 None:intergenic 45.0%
TTTGCAGATCGCACAAAGCA+AGG + chr1_4:8154200-8154219 None:intergenic 45.0%
TGAAAGCAGCAAAAACCCAG+AGG + chr1_4:8154231-8154250 None:intergenic 45.0%
TACTTTGGCTGCCATCTACT+TGG - chr1_4:8154306-8154325 Msa0147990:intron 45.0%
GCAAATGCCAACCAAGTAGA+TGG + chr1_4:8154320-8154339 None:intergenic 45.0%
ACCTGTCAGATCTCACAAAG+GGG + chr1_4:8154384-8154403 None:intergenic 45.0%
CACCTGTCAGATCTCACAAA+GGG + chr1_4:8154385-8154404 None:intergenic 45.0%
CTTTGTGAGATCTGACAGGT+GGG - chr1_4:8154384-8154403 Msa0147990:intron 45.0%
TGTAGTGAAAGCTGGAAGAC+AGG + chr1_4:8154978-8154997 None:intergenic 45.0%
! AGACCGTCATGAAAGTACAC+AGG + chr1_4:8155134-8155153 None:intergenic 45.0%
CTTTCATGACGGTCTCTACT+AGG - chr1_4:8155139-8155158 Msa0147990:intron 45.0%
CGTGAGACTGTTAGAGCTTA+TGG + chr1_4:8155626-8155645 None:intergenic 45.0%
CAGATGCATACAACTCAGCT+AGG + chr1_4:8156415-8156434 None:intergenic 45.0%
TGAGCTAAGGGTTAAGGAGT+TGG + chr1_4:8156724-8156743 None:intergenic 45.0%
! CTGGTTTGAGCTAAGGGTTA+AGG + chr1_4:8156730-8156749 None:intergenic 45.0%
TCGGAAAGGCTAACATAGGA+GGG + chr1_4:8156940-8156959 None:intergenic 45.0%
TGCATATTCTCCGATTGGCA+GGG + chr1_4:8157185-8157204 None:intergenic 45.0%
ACTGCTGCATATTCTCCGAT+TGG + chr1_4:8157190-8157209 None:intergenic 45.0%
TGATGAACTAGCTGAAGCAG+AGG - chr1_4:8157306-8157325 Msa0147990:intron 45.0%
AAATGCTAACAGGGGTCCTT+GGG - chr1_4:8157396-8157415 Msa0147990:intron 45.0%
ACTTCTAAACAAGTGCCCCA+AGG + chr1_4:8157415-8157434 None:intergenic 45.0%
!! TGTCCTAAGGGCACTTGTTA+AGG + chr1_4:8157491-8157510 None:intergenic 45.0%
!! CTGACTGATTTGCCTAGGAA+TGG - chr1_4:8158024-8158043 Msa0147990:intron 45.0%
!! GACTGATTTGCCTAGGAATG+GGG - chr1_4:8158026-8158045 Msa0147990:intron 45.0%
!! CATCAGGTTGGTTATTTGGG+CGG - chr1_4:8158606-8158625 Msa0147990:intron 45.0%
AACACCGAAAAAGGTGGCTA+TGG + chr1_4:8158652-8158671 None:intergenic 45.0%
GCGCGCACACAAAAAAAGTA+GGG + chr1_4:8158692-8158711 None:intergenic 45.0%
TGCGCGCACACAAAAAAAGT+AGG + chr1_4:8158693-8158712 None:intergenic 45.0%
!! TTCTCAAAGCCTGGCTCTAA+TGG + chr1_4:8158880-8158899 None:intergenic 45.0%
ACAGCTTTCTTCTCAAAGCC+TGG + chr1_4:8158889-8158908 None:intergenic 45.0%
!!! AATAAAAGTATATATTTTTT+TGG - chr1_4:8151521-8151540 Msa0147990:intron 5.0%
!!! ATAAAAGTATATATTTTTTT+GGG - chr1_4:8151522-8151541 Msa0147990:intron 5.0%
!! GTTCTTATTGGTTGGCCTGG+TGG - chr1_4:8150021-8150040 Msa0147990:intron 50.0%
!! GTGGTGTTGTCTTGGGATCT+TGG - chr1_4:8150040-8150059 Msa0147990:intron 50.0%
TTGGAGTGTGCTCATCGTCA+AGG - chr1_4:8150059-8150078 Msa0147990:intron 50.0%
TTCGCTCACCGATGCCAATT+TGG - chr1_4:8150089-8150108 Msa0147990:intron 50.0%
TCGCTCACCGATGCCAATTT+GGG - chr1_4:8150090-8150109 Msa0147990:intron 50.0%
TCACCGATGCCAATTTGGGT+GGG - chr1_4:8150094-8150113 Msa0147990:intron 50.0%
TAGCCCACCCAAATTGGCAT+CGG + chr1_4:8150100-8150119 None:intergenic 50.0%
ACAGAAATCGGGGTTGAGCT+TGG - chr1_4:8150252-8150271 Msa0147990:intron 50.0%
TTCGAAAGTCGGGGTTTCAC+AGG + chr1_4:8150568-8150587 None:intergenic 50.0%
! CACTATTAGAGCGAGAGTGC+GGG - chr1_4:8150921-8150940 Msa0147990:intron 50.0%
GCATGTAGAGAGAAGACCCT+TGG - chr1_4:8150995-8151014 Msa0147990:intron 50.0%
ATCCTTACGACGGCATCCAA+GGG + chr1_4:8151014-8151033 None:intergenic 50.0%
AATCCTTACGACGGCATCCA+AGG + chr1_4:8151015-8151034 None:intergenic 50.0%
TTTATCCCACTAAGTGGGGC+CGG + chr1_4:8151107-8151126 None:intergenic 50.0%
! GTATCTCTTTTGTCCCAGGC+AGG + chr1_4:8151239-8151258 None:intergenic 50.0%
CGAAGAAAGATGGGCAGGAA+AGG + chr1_4:8152420-8152439 None:intergenic 50.0%
ATTTCCTACTGTGACCTGCG+AGG - chr1_4:8152476-8152495 Msa0147990:intron 50.0%
! GGCCCCATTTTGCAAGGAAA+GGG + chr1_4:8152625-8152644 None:intergenic 50.0%
CTTTCCTTGCAAAATGGGGC+CGG - chr1_4:8152624-8152643 Msa0147990:intron 50.0%
ACTTACCTTTGTCGCCCACT+AGG - chr1_4:8152676-8152695 Msa0147990:intron 50.0%
!! ATGGTGCTGCAAGTGCTATG+TGG + chr1_4:8152708-8152727 None:intergenic 50.0%
GGTACCACAAAGTGAGGGTA+AGG + chr1_4:8152941-8152960 None:intergenic 50.0%
!! AGAAGGGTATTTCTCGCAGG+GGG + chr1_4:8153077-8153096 None:intergenic 50.0%
!! CAGAAGGGTATTTCTCGCAG+GGG + chr1_4:8153078-8153097 None:intergenic 50.0%
GTGTCCACCTGTCAACAGAA+GGG + chr1_4:8153093-8153112 None:intergenic 50.0%
!!! GCTGGCGCTGCAAAGTTTTT+TGG + chr1_4:8153140-8153159 None:intergenic 50.0%
! AAGTGGTAATGTGAGGCTGC+TGG + chr1_4:8153158-8153177 None:intergenic 50.0%
!! TGGGGGGATATGGGTTGATT+AGG + chr1_4:8153239-8153258 None:intergenic 50.0%
! TGGGGTGCCCATTCTCATAA+TGG + chr1_4:8153444-8153463 None:intergenic 50.0%
! AGCTCAAAGGGTGCAAGCAT+GGG + chr1_4:8153463-8153482 None:intergenic 50.0%
TATCTTGGCTGCTGAGGTAG+AGG + chr1_4:8153554-8153573 None:intergenic 50.0%
AGAGTGCGAGACCGATATCT+TGG + chr1_4:8153569-8153588 None:intergenic 50.0%
GGACTCTGTTACAAGTGTGG+AGG + chr1_4:8153664-8153683 None:intergenic 50.0%
ACTAGGCGATCACTGAGAGA+AGG + chr1_4:8153693-8153712 None:intergenic 50.0%
TCTCTCAGTGATCGCCTAGT+AGG - chr1_4:8153693-8153712 Msa0147990:intron 50.0%
TCCGAGTGTATGAATTCGGC+TGG - chr1_4:8153869-8153888 Msa0147990:intron 50.0%
CCCAGCCGAATTCATACACT+CGG + chr1_4:8153873-8153892 None:intergenic 50.0%
CCGAGTGTATGAATTCGGCT+GGG - chr1_4:8153870-8153889 Msa0147990:intron 50.0%
!! TCGGGTTGGGTTTCAACTAC+TGG + chr1_4:8153896-8153915 None:intergenic 50.0%
!! CAATTTGGCTCGGCTATGCA+TGG + chr1_4:8153970-8153989 None:intergenic 50.0%
CATGCATAGCCGAGCCAAAT+TGG - chr1_4:8153968-8153987 Msa0147990:intron 50.0%
CAGAATGATCACCCGTGCAA+AGG + chr1_4:8154033-8154052 None:intergenic 50.0%
TTGCACGGGTGATCATTCTG+TGG - chr1_4:8154033-8154052 Msa0147990:intron 50.0%
TGCACGGGTGATCATTCTGT+GGG - chr1_4:8154034-8154053 Msa0147990:intron 50.0%
CAGTGAGAAATCGGTGGAGA+AGG + chr1_4:8154167-8154186 None:intergenic 50.0%
CGGTAACAGTGAGAAATCGG+TGG + chr1_4:8154173-8154192 None:intergenic 50.0%
TTGGCTGCCATCTACTTGGT+TGG - chr1_4:8154310-8154329 Msa0147990:intron 50.0%
TCCCCTTTGTGAGATCTGAC+AGG - chr1_4:8154380-8154399 Msa0147990:intron 50.0%
CCACCTGTCAGATCTCACAA+AGG + chr1_4:8154386-8154405 None:intergenic 50.0%
CCTTTGTGAGATCTGACAGG+TGG - chr1_4:8154383-8154402 Msa0147990:intron 50.0%
ACGGTCTCTACTAGGCTATG+TGG - chr1_4:8155147-8155166 Msa0147990:intron 50.0%
CAGGAAGTCAGAAACGGTGT+TGG + chr1_4:8155372-8155391 None:intergenic 50.0%
ATGGGTCCCACCAAATCATG+TGG - chr1_4:8155521-8155540 Msa0147990:intron 50.0%
TGGGTCCCACCAAATCATGT+GGG - chr1_4:8155522-8155541 Msa0147990:intron 50.0%
!! TGGGACCCACATGATTTGGT+GGG + chr1_4:8155530-8155549 None:intergenic 50.0%
! ATGGGACCCACATGATTTGG+TGG + chr1_4:8155531-8155550 None:intergenic 50.0%
GTTAGGATCAATGGGTGCTC+TGG - chr1_4:8155967-8155986 Msa0147990:intron 50.0%
GATAGTAGACGAGGAAGCAG+CGG + chr1_4:8156471-8156490 None:intergenic 50.0%
ACCTTCTCATCCACCCTTGT+TGG - chr1_4:8156515-8156534 Msa0147990:intron 50.0%
ACCAACAAGGGTGGATGAGA+AGG + chr1_4:8156519-8156538 None:intergenic 50.0%
GTCGAGTAAACCAACAAGGG+TGG + chr1_4:8156528-8156547 None:intergenic 50.0%
CGCGAGTCGTTGAAAGGAAT+AGG + chr1_4:8156605-8156624 None:intergenic 50.0%
GCTAAGGGTTAAGGAGTTGG+CGG + chr1_4:8156721-8156740 None:intergenic 50.0%
AGGGGATTGGGTAGTTCAAC+TGG + chr1_4:8156749-8156768 None:intergenic 50.0%
CGGAAAGGCTAACATAGGAG+GGG + chr1_4:8156939-8156958 None:intergenic 50.0%
CTCGGAAAGGCTAACATAGG+AGG + chr1_4:8156941-8156960 None:intergenic 50.0%
CTGCATATTCTCCGATTGGC+AGG + chr1_4:8157186-8157205 None:intergenic 50.0%
CGCATGGGATCTTCCTTCAA+AGG - chr1_4:8157249-8157268 Msa0147990:intron 50.0%
GAAATGCTAACAGGGGTCCT+TGG - chr1_4:8157395-8157414 Msa0147990:intron 50.0%
AATGCTAACAGGGGTCCTTG+GGG - chr1_4:8157397-8157416 Msa0147990:intron 50.0%
TTTACAGTCTCCTTGGGGTG+TGG - chr1_4:8158424-8158443 Msa0147990:intron 50.0%
! AGGTTGGTTATTTGGGCGGA+GGG - chr1_4:8158610-8158629 Msa0147990:intron 50.0%
GGAGGATACATGCTCGATCA+CGG - chr1_4:8158734-8158753 Msa0147990:intron 50.0%
!! TTGGCCTGGTGGTGTTGTCT+TGG - chr1_4:8150032-8150051 Msa0147990:intron 55.0%
!! TGGCCTGGTGGTGTTGTCTT+GGG - chr1_4:8150033-8150052 Msa0147990:intron 55.0%
GATCCCAAGACAACACCACC+AGG + chr1_4:8150039-8150058 None:intergenic 55.0%
GTGCTCATCGTCAAGGTCTC+AGG - chr1_4:8150066-8150085 Msa0147990:intron 55.0%
CTCACCGATGCCAATTTGGG+TGG - chr1_4:8150093-8150112 Msa0147990:intron 55.0%
AGGATGTTGCGCTGGATGAG+CGG - chr1_4:8150868-8150887 Msa0147990:intron 55.0%
!! TCATACTGGCTTAGCCTGCC+TGG - chr1_4:8151222-8151241 Msa0147990:CDS 55.0%
!! CATACTGGCTTAGCCTGCCT+GGG - chr1_4:8151223-8151242 Msa0147990:CDS 55.0%
CTGGAGGAGCTATGCTCTGA+GGG + chr1_4:8152262-8152281 None:intergenic 55.0%
TCTGGAGGAGCTATGCTCTG+AGG + chr1_4:8152263-8152282 None:intergenic 55.0%
CCACACGAAGAAAGATGGGC+AGG + chr1_4:8152425-8152444 None:intergenic 55.0%
CCTGCCCATCTTTCTTCGTG+TGG - chr1_4:8152422-8152441 Msa0147990:intron 55.0%
! CGGCCCCATTTTGCAAGGAA+AGG + chr1_4:8152626-8152645 None:intergenic 55.0%
! TACTCCGGCCCCATTTTGCA+AGG + chr1_4:8152631-8152650 None:intergenic 55.0%
CTATGTGGCCAGCACCTAGT+GGG + chr1_4:8152693-8152712 None:intergenic 55.0%
TGCAAGAGGGTCTCTCGAGT+CGG - chr1_4:8152738-8152757 Msa0147990:intron 55.0%
GGTGTCCACCTGTCAACAGA+AGG + chr1_4:8153094-8153113 None:intergenic 55.0%
ACCAAGTGGGTGGAGCTCAA+GGG + chr1_4:8153187-8153206 None:intergenic 55.0%
!! GGCTATGGGTTGGACTGTGT+AGG + chr1_4:8153375-8153394 None:intergenic 55.0%
!! AGAGTGTTGGGGGTGGCTAT+GGG + chr1_4:8153389-8153408 None:intergenic 55.0%
!! AAGAGTGTTGGGGGTGGCTA+TGG + chr1_4:8153390-8153409 None:intergenic 55.0%
ATAGCCACCCCCAACACTCT+TGG - chr1_4:8153389-8153408 Msa0147990:intron 55.0%
!! ATCTCCAAGAGTGTTGGGGG+TGG + chr1_4:8153396-8153415 None:intergenic 55.0%
! GCTCAAAGGGTGCAAGCATG+GGG + chr1_4:8153462-8153481 None:intergenic 55.0%
! GAGCTCAAAGGGTGCAAGCA+TGG + chr1_4:8153464-8153483 None:intergenic 55.0%
TTGGCTGCTGAGGTAGAGGA+AGG + chr1_4:8153550-8153569 None:intergenic 55.0%
GACCGATATCTTGGCTGCTG+AGG + chr1_4:8153560-8153579 None:intergenic 55.0%
!! GGCAGTTTGAGCACTGATGG+CGG - chr1_4:8153626-8153645 Msa0147990:CDS 55.0%
!! GCAGTTTGAGCACTGATGGC+GGG - chr1_4:8153627-8153646 Msa0147990:CDS 55.0%
! GATCTCAGGAAAGAGCGCAC+AGG + chr1_4:8153747-8153766 None:intergenic 55.0%
GACCCACTTCGATGCTTCTC+CGG - chr1_4:8153780-8153799 Msa0147990:intron 55.0%
ACCCACTTCGATGCTTCTCC+GGG - chr1_4:8153781-8153800 Msa0147990:intron 55.0%
!! ACCCGGAGAAGCATCGAAGT+GGG + chr1_4:8153785-8153804 None:intergenic 55.0%
!! AACCCGGAGAAGCATCGAAG+TGG + chr1_4:8153786-8153805 None:intergenic 55.0%
ACCAATCGCTCCCATGTGTG+TGG - chr1_4:8153829-8153848 Msa0147990:intron 55.0%
! GAGTGAAGGCCATTCGGGTT+GGG + chr1_4:8153909-8153928 None:intergenic 55.0%
TGCTGGGAGTGAAGGCCATT+CGG + chr1_4:8153915-8153934 None:intergenic 55.0%
ATGGCCTTCACTCCCAGCAT+AGG - chr1_4:8153916-8153935 Msa0147990:intron 55.0%
TGGCCTTCACTCCCAGCATA+GGG - chr1_4:8153917-8153936 Msa0147990:intron 55.0%
AGACCCTATGCTGGGAGTGA+AGG + chr1_4:8153923-8153942 None:intergenic 55.0%
!! TTGGCTCGGCTATGCATGGA+GGG + chr1_4:8153966-8153985 None:intergenic 55.0%
!! TTTGGCTCGGCTATGCATGG+AGG + chr1_4:8153967-8153986 None:intergenic 55.0%
GGCAGCCAAAGTATGAGCTC+AGG + chr1_4:8154299-8154318 None:intergenic 55.0%
CGAGGAAGCAGCGGAGAAAA+AGG + chr1_4:8156462-8156481 None:intergenic 55.0%
TCCTTGCCAGGACTTGAACC+TGG - chr1_4:8156694-8156713 Msa0147990:intron 55.0%
TCCAGGTTCAAGTCCTGGCA+AGG + chr1_4:8156698-8156717 None:intergenic 55.0%
CTACCTACAGCCCTGCCAAT+CGG - chr1_4:8157172-8157191 Msa0147990:intron 55.0%
TGAACGGTCTCCCCATTCCT+AGG + chr1_4:8158039-8158058 None:intergenic 55.0%
GTGGCAAGTGGAGCTATTGC+TGG - chr1_4:8158443-8158462 Msa0147990:intron 55.0%
!! CAGGTTGGTTATTTGGGCGG+AGG - chr1_4:8158609-8158628 Msa0147990:intron 55.0%
! AGCGTTGGACCGGGGGATTA+TGG - chr1_4:8150310-8150329 Msa0147990:intron 60.0%
CGGAGATGAGGATGTTGCGC+TGG - chr1_4:8150860-8150879 Msa0147990:intron 60.0%
GACCCTTGGATGCCGTCGTA+AGG - chr1_4:8151009-8151028 Msa0147990:intron 60.0%
ACTAAGTGGGGCCGGCTACA+TGG + chr1_4:8151099-8151118 None:intergenic 60.0%
ATGTAGCCGGCCCCACTTAG+TGG - chr1_4:8151098-8151117 Msa0147990:intron 60.0%
TGTAGCCGGCCCCACTTAGT+GGG - chr1_4:8151099-8151118 Msa0147990:intron 60.0%
ACATGGTTTCTCGGCCTCGC+AGG + chr1_4:8152493-8152512 None:intergenic 60.0%
! CAGCACCTAGTGGGCGACAA+AGG + chr1_4:8152684-8152703 None:intergenic 60.0%
CTTTGTCGCCCACTAGGTGC+TGG - chr1_4:8152682-8152701 Msa0147990:intron 60.0%
GCTATGTGGCCAGCACCTAG+TGG + chr1_4:8152694-8152713 None:intergenic 60.0%
TCCCTTGAGCTCCACCCACT+TGG - chr1_4:8153183-8153202 Msa0147990:intron 60.0%
CACCAAGTGGGTGGAGCTCA+AGG + chr1_4:8153188-8153207 None:intergenic 60.0%
TGTTGGGGGTGGCTATGGGT+TGG + chr1_4:8153385-8153404 None:intergenic 60.0%
!! TTGAGCACTGATGGCGGGAG+TGG - chr1_4:8153632-8153651 Msa0147990:intron 60.0%
!! CACTGATGGCGGGAGTGGTA+GGG - chr1_4:8153637-8153656 Msa0147990:intron 60.0%
!! ACTGATGGCGGGAGTGGTAG+GGG - chr1_4:8153638-8153657 Msa0147990:intron 60.0%
GCCACACACATGGGAGCGAT+TGG + chr1_4:8153833-8153852 None:intergenic 60.0%
ATCGCTCCCATGTGTGTGGC+CGG - chr1_4:8153833-8153852 Msa0147990:intron 60.0%
GGAGTGAAGGCCATTCGGGT+TGG + chr1_4:8153910-8153929 None:intergenic 60.0%
GCTGGGAGTGAAGGCCATTC+GGG + chr1_4:8153914-8153933 None:intergenic 60.0%
GGTGGAGAAGGATTCGCGCA+AGG + chr1_4:8154155-8154174 None:intergenic 60.0%
GGTTAAGGAGTTGGCGGTCC+AGG + chr1_4:8156715-8156734 None:intergenic 60.0%
TCTCCGATTGGCAGGGCTGT+AGG + chr1_4:8157178-8157197 None:intergenic 60.0%
TCTCCTTGGGGTGTGGCAAG+TGG - chr1_4:8158431-8158450 Msa0147990:intron 60.0%
TCGGCCTCGCAGGTCACAGT+AGG + chr1_4:8152483-8152502 None:intergenic 65.0%
!! GCACTGATGGCGGGAGTGGT+AGG - chr1_4:8153636-8153655 Msa0147990:intron 65.0%
GGCGGTCCAGGTTCAAGTCC+TGG + chr1_4:8156703-8156722 None:intergenic 65.0%
AATCGCGCTCGCAGCTGCTC+AGG - chr1_4:8158070-8158089 Msa0147990:intron 65.0%
GCTCCACTTGCCACACCCCA+AGG + chr1_4:8158437-8158456 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 8149481 8159056 8149481 ID=Msa0147990;Name=Msa0147990
chr1_4 mRNA 8149481 8159056 8149481 ID=Msa0147990-mRNA-1;Parent=Msa0147990;Name=Msa0147990-mRNA-1;_AED=0.11;_eAED=0.11;_QI=179|0.71|0.87|1|0.85|0.87|8|379|296
chr1_4 exon 8149481 8149925 8149481 ID=Msa0147990-mRNA-1:exon:3523;Parent=Msa0147990-mRNA-1
chr1_4 exon 8150804 8150869 8150804 ID=Msa0147990-mRNA-1:exon:3522;Parent=Msa0147990-mRNA-1
chr1_4 exon 8151204 8151355 8151204 ID=Msa0147990-mRNA-1:exon:3521;Parent=Msa0147990-mRNA-1
chr1_4 exon 8152479 8152575 8152479 ID=Msa0147990-mRNA-1:exon:3520;Parent=Msa0147990-mRNA-1
chr1_4 exon 8153600 8153647 8153600 ID=Msa0147990-mRNA-1:exon:3519;Parent=Msa0147990-mRNA-1
chr1_4 exon 8156805 8156985 8156805 ID=Msa0147990-mRNA-1:exon:3518;Parent=Msa0147990-mRNA-1
chr1_4 exon 8158136 8158295 8158136 ID=Msa0147990-mRNA-1:exon:3517;Parent=Msa0147990-mRNA-1
chr1_4 exon 8158757 8159056 8158757 ID=Msa0147990-mRNA-1:exon:3516;Parent=Msa0147990-mRNA-1
chr1_4 five_prime_UTR 8158878 8159056 8158878 ID=Msa0147990-mRNA-1:five_prime_utr;Parent=Msa0147990-mRNA-1
chr1_4 CDS 8158757 8158877 8158757 ID=Msa0147990-mRNA-1:cds;Parent=Msa0147990-mRNA-1
chr1_4 CDS 8158136 8158295 8158136 ID=Msa0147990-mRNA-1:cds;Parent=Msa0147990-mRNA-1
chr1_4 CDS 8156805 8156985 8156805 ID=Msa0147990-mRNA-1:cds;Parent=Msa0147990-mRNA-1
chr1_4 CDS 8153600 8153647 8153600 ID=Msa0147990-mRNA-1:cds;Parent=Msa0147990-mRNA-1
chr1_4 CDS 8152479 8152575 8152479 ID=Msa0147990-mRNA-1:cds;Parent=Msa0147990-mRNA-1
chr1_4 CDS 8151204 8151355 8151204 ID=Msa0147990-mRNA-1:cds;Parent=Msa0147990-mRNA-1
chr1_4 CDS 8150804 8150869 8150804 ID=Msa0147990-mRNA-1:cds;Parent=Msa0147990-mRNA-1
chr1_4 CDS 8149860 8149925 8149860 ID=Msa0147990-mRNA-1:cds;Parent=Msa0147990-mRNA-1
chr1_4 three_prime_UTR 8149481 8149859 8149481 ID=Msa0147990-mRNA-1:three_prime_utr;Parent=Msa0147990-mRNA-1
Gene Sequence

>Msa0147990

ATGAAAGGTTTAGGTTCTCATACACCCTTGATTCCAAAGGGAAAACCTCCTCTTTCATTTGCAATATTGAATGCATTACCATCTTGTACTTATTTCTCTGGAAACACCACTTTATCTCCATTAAGATGCAGACAGAAATCGGGGTTGAGCTTGGCCCGTGAAACAATTCGAGCACAAGCATCAAATATTAGCGTTGGACCGGGGGATTATGGAAGCAATAATGAGAAAGACAGCCAGAATGTCTCTGACAGAAATTCTGTCGATGACAGTTCATCTAAAATTGTGAAACCTACTCAGATTCCTTATCCCGTCTCTATAGCTTTTGTGCTGTTTGGATGTGCTCTTGTGTTTTCACTAATAGCGTTTGTGAAAGGAGGACCTTCATCAGTTCTTGCAGCAATTGCAAAATCAGGATTCACTGCTGCATTTACATTAATATTTGTTTCTGAAATCGGTGACAAGACATTCTTTATTGCTGCACTCTTGGCAATGCAATATGAGAAGGGATTGGTTTTGTTAGGATCAATGGGTGCTCTGGCGCTCATGTCAATCCTATCTGTTGTAATTGGCCGTATCTTTCAATCAGTGCCTGCTCAGTTCCAAACAACCCTGCCAATCGGAGAATATGCAGCAGTAACTCTTCTTATGTTTTTTGGCCTAAAATCAATAAAAGACGCATGGGATCTTCCTTCAAAGGATGTTAAAAACGGTGATAACAGCAGTCCTGAACTTGATGAACTAGCTGAAGCAGAGGAGCTTGCATCGCAACGGCTTTCAAATCCTCTTGAGATTCTTTGGAAATCGTTCAGTCTTGTATTTTTTGCTGTTGGTTATTTGGGCGGAGGGCTGTTTCTAATTTTTGCCATAGCCACCTTTTTCGGTGTTTTTTGA

Protein sequence

>Msa0147990

MKGLGSHTPLIPKGKPPLSFAILNALPSCTYFSGNTTLSPLRCRQKSGLSLARETIRAQASNISVGPGDYGSNNEKDSQNVSDRNSVDDSSSKIVKPTQIPYPVSIAFVLFGCALVFSLIAFVKGGPSSVLAAIAKSGFTAAFTLIFVSEIGDKTFFIAALLAMQYEKGLVLLGSMGALALMSILSVVIGRIFQSVPAQFQTTLPIGEYAAVTLLMFFGLKSIKDAWDLPSKDVKNGDNSSPELDELAEAEELASQRLSNPLEILWKSFSLVFFAVGYLGGGLFLIFAIATFFGVF*