AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0177490


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0177490 MtrunA17_Chr1g0200431 95.224 335 15 1 1 335 3 336 0.0 608
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0177490 AT1G22700.1 59.223 309 114 5 30 335 2 301 1.30e-108 319
Msa0177490 AT1G22700.2 59.740 308 109 5 30 335 2 296 2.63e-108 318
Msa0177490 AT1G22700.3 78.894 199 42 0 130 328 6 204 3.64e-104 304

Find 124 sgRNAs with CRISPR-Local

Find 259 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAGTGTTCAATTCTAAAA+TGG 0.137389 1_4:-64492724 Msa0177490:three_prime_UTR
GATTATGTTTGAAGGAATTT+TGG 0.161799 1_4:-64492901 Msa0177490:three_prime_UTR
CTGTTGGGTTTGCTCGGGGC+TGG 0.202462 1_4:-64494329 Msa0177490:CDS
CATCTTCGATTCTTCTTCTA+AGG 0.229510 1_4:+64496259 None:intergenic
TTAAGCAATGAATATATAAA+TGG 0.255206 1_4:+64492605 None:intergenic
CGCGATGGGAAGCTTGAAAA+AGG 0.299030 1_4:-64493224 Msa0177490:CDS
TGTTGGGTTTGCTCGGGGCT+GGG 0.317976 1_4:-64494328 Msa0177490:CDS
TACAACTCACACTATAAATA+TGG 0.318327 1_4:-64492960 Msa0177490:three_prime_UTR
AATCATTGATGTTTATGTTC+TGG 0.323312 1_4:-64492567 Msa0177490:three_prime_UTR
TGCTTCAAGCTATTGAGAAA+TGG 0.326316 1_4:-64493746 Msa0177490:CDS
GGCATAGTTGAGGTAAAATA+TGG 0.339217 1_4:-64492772 Msa0177490:three_prime_UTR
GGTAGATTGAAAAGTGGATT+TGG 0.345980 1_4:+64496163 None:intergenic
TTTAGAATTGAACACTGAAT+TGG 0.353249 1_4:+64492728 None:intergenic
GGCCGTGCAATCTTGTTGTT+AGG 0.361482 1_4:+64493065 None:intergenic
GAAAGAGAAGGAGAAGAGTA+AGG 0.371916 1_4:+64496200 None:intergenic
GCAGTAGCAAGTATATTAGT+TGG 0.384763 1_4:+64494351 None:intergenic
CTACTGCTGTTGGGTTTGCT+CGG 0.387033 1_4:-64494335 Msa0177490:CDS
GCCTTGGGAATTCAGCAAAC+AGG 0.388920 1_4:-64495737 Msa0177490:CDS
AATATCTTGATTATGTTTGA+AGG 0.391871 1_4:-64492909 Msa0177490:three_prime_UTR
TGGTGAGTTTAGAAGAGGTA+AGG 0.394197 1_4:+64496141 None:intergenic
CAGTGGAAAATCTTCAAGAT+TGG 0.395260 1_4:-64494511 Msa0177490:CDS
AACACATACACACACCTTGC+CGG 0.398910 1_4:-64496324 Msa0177490:five_prime_UTR
TTACAGAAAGATTAAAGCCT+TGG 0.400133 1_4:-64495753 Msa0177490:intron
TCAGTGTTCAATTCTAAAAT+GGG 0.407002 1_4:-64492723 Msa0177490:three_prime_UTR
CAAGAATGCCGAAACCCATT+TGG 0.407616 1_4:+64494478 None:intergenic
TACTGCTGTTGGGTTTGCTC+GGG 0.408318 1_4:-64494334 Msa0177490:CDS
TGTCAATTACTTAATGCTAA+TGG 0.410849 1_4:-64492793 Msa0177490:three_prime_UTR
GCTTCAAGCTATTGAGAAAT+GGG 0.415882 1_4:-64493745 Msa0177490:CDS
GAAGATAAATGAGATGTATC+AGG 0.418389 1_4:-64494399 Msa0177490:CDS
AAGGTGTTACTGTCAGATAT+AGG 0.419915 1_4:-64493004 Msa0177490:CDS
AGGTGTTACTGTCAGATATA+GGG 0.420068 1_4:-64493003 Msa0177490:CDS
CCCTGTTTGCTGAATTCCCA+AGG 0.422052 1_4:+64495736 None:intergenic
AATATACTTGCTACTGCTGT+TGG 0.422402 1_4:-64494345 Msa0177490:CDS
TACAGAAAGATTAAAGCCTT+GGG 0.422829 1_4:-64495752 Msa0177490:intron
GTCAGTTCCTTCCTTCCGAT+GGG 0.422903 1_4:+64496350 None:intergenic
TGTCAGTTCCTTCCTTCCGA+TGG 0.424892 1_4:+64496349 None:intergenic
GTAAGGGAAATGAGTGAAAG+TGG 0.427395 1_4:+64496217 None:intergenic
GATTCTTTGAAGGAACTTGT+TGG 0.432188 1_4:-64493035 Msa0177490:CDS
AGCAAGAACTTGGTAGCAGC+TGG 0.444627 1_4:+64493765 None:intergenic
TGGCTCTAGTGATGTATTCA+AGG 0.447573 1_4:-64492881 Msa0177490:three_prime_UTR
ATATACTTGCTACTGCTGTT+GGG 0.457513 1_4:-64494344 Msa0177490:CDS
TAAATGAGATGTATCAGGTC+GGG 0.460099 1_4:-64494394 Msa0177490:CDS
GAAATGGGATGGAGAAAGTC+AGG 0.462836 1_4:-64493730 Msa0177490:CDS
GTCACAGCATGGAACAATCT+TGG 0.463501 1_4:-64493158 Msa0177490:CDS
CAAGAGTAGGATTCTACTCC+AGG 0.474183 1_4:-64495681 Msa0177490:intron
CTTGCAACTCTTTAGCAGAA+AGG 0.474641 1_4:+64494261 None:intergenic
TTCCATGCTGTGACATAGCC+TGG 0.480857 1_4:+64493167 None:intergenic
GGTGAGTTTAGAAGAGGTAA+GGG 0.481050 1_4:+64496142 None:intergenic
ATTGGAGAAAGTCATCCAAA+TGG 0.481527 1_4:-64494493 Msa0177490:CDS
GCTCTCTGCGGACAAGAACT+TGG 0.483373 1_4:+64494288 None:intergenic
AAAGTCATCCAAATGGGTTT+CGG 0.484180 1_4:-64494486 Msa0177490:CDS
GCGACTGAGCTGTTTGAACT+TGG 0.485378 1_4:-64493816 Msa0177490:CDS
TTGGAGAAAGTCATCCAAAT+GGG 0.495515 1_4:-64494492 Msa0177490:CDS
TTATAGTGTGAGTTGTAGAA+TGG 0.496461 1_4:+64492966 None:intergenic
AATAGCTTGAAGCAAGAACT+TGG 0.496680 1_4:+64493755 None:intergenic
ATATAGGTTTACAACGCTCT+TGG 0.496693 1_4:-64493260 Msa0177490:intron
TAGTTGAGGTAAAATATGGC+TGG 0.500436 1_4:-64492768 Msa0177490:three_prime_UTR
ATGGTTATAAGGGGTTCCAT+TGG 0.504983 1_4:+64495305 None:intergenic
AAAATATGGCTGGGAACGGT+TGG 0.509872 1_4:-64492758 Msa0177490:three_prime_UTR
TGTTTGTTCCTAAATTAGAC+AGG 0.510919 1_4:+64496283 None:intergenic
AAAGAGAAGGAGAAGAGTAA+GGG 0.517442 1_4:+64496201 None:intergenic
AGAATATCCGTCTGCACTGA+AGG 0.520074 1_4:-64493114 Msa0177490:CDS
TTCCTTCAAAGAATCTCTCC+TGG 0.520808 1_4:+64493043 None:intergenic
GGATTTGGAAGGGAAGATAG+AGG 0.525986 1_4:+64496178 None:intergenic
TCACTTGCATATGAAACATC+AGG 0.526055 1_4:+64494428 None:intergenic
GATTGAAAAGTGGATTTGGA+AGG 0.528225 1_4:+64496167 None:intergenic
GTCGGGGAGTTGTTTGACTT+AGG 0.529260 1_4:-64494377 Msa0177490:CDS
GGTGTCAGTTATGTTCGCGA+TGG 0.530417 1_4:-64493239 Msa0177490:CDS
ACCATTCTACCAAAATAAGA+AGG 0.534831 1_4:+64492846 None:intergenic
TAGAATTACTTGAATGAGCA+TGG 0.537754 1_4:+64496110 None:intergenic
ACAACAAGATTGCACGGCCC+AGG 0.538823 1_4:-64493061 Msa0177490:CDS
ATATATAAATGGCAAGTTCG+TGG 0.541905 1_4:+64492616 None:intergenic
GTGTCAGTTATGTTCGCGAT+GGG 0.546218 1_4:-64493238 Msa0177490:CDS
GGTAAGGGTAGATTGAAAAG+TGG 0.546273 1_4:+64496157 None:intergenic
TCCTTCAAAGAATCTCTCCT+GGG 0.546723 1_4:+64493044 None:intergenic
TCCTACTCTTGACTGTATCA+AGG 0.546925 1_4:+64495693 None:intergenic
TTACAATGCATGAAAACAGC+CGG 0.555612 1_4:+64492657 None:intergenic
GCCCAGGAGAGATTCTTTGA+AGG 0.556482 1_4:-64493045 Msa0177490:CDS
GACGAAGACAGATGTTTCAA+AGG 0.556964 1_4:-64495334 Msa0177490:intron
GGCTGGGAACGGTTGGAAGA+CGG 0.560661 1_4:-64492751 Msa0177490:three_prime_UTR
ATCCTAACAACAAGATTGCA+CGG 0.562865 1_4:-64493067 Msa0177490:CDS
AACTTGGTGCAGTGATGTTG+CGG 0.566153 1_4:-64493800 Msa0177490:CDS
AAATGAGATGTATCAGGTCG+GGG 0.569807 1_4:-64494393 Msa0177490:CDS
CCTTGGGAATTCAGCAAACA+GGG 0.575011 1_4:-64495736 Msa0177490:CDS
ACTTTGTCCTTAGTAAAACA+TGG 0.575100 1_4:-64492532 Msa0177490:three_prime_UTR
TGAAGTGGTGAGTTTAGAAG+AGG 0.575676 1_4:+64496136 None:intergenic
TCAAATGCCTTCAGTGCAGA+CGG 0.577765 1_4:+64493107 None:intergenic
ACTGCTGTTGGGTTTGCTCG+GGG 0.578511 1_4:-64494333 Msa0177490:CDS
AGTTGAGGTAAAATATGGCT+GGG 0.578608 1_4:-64492767 Msa0177490:three_prime_UTR
TTGGTAGAATGGTGATAACA+AGG 0.579796 1_4:-64492836 Msa0177490:three_prime_UTR
GGGAAGATAGAGGAAAGAGA+AGG 0.581551 1_4:+64496188 None:intergenic
TTTGTGAAAATGGTTATAAG+GGG 0.582953 1_4:+64495296 None:intergenic
ATAAATGGCAAGTTCGTGGA+AGG 0.586016 1_4:+64492620 None:intergenic
CAAACAGGGTCCACTCCACA+TGG 0.587054 1_4:-64495722 Msa0177490:CDS
ATGACACCCCATCGGAAGGA+AGG 0.591351 1_4:-64496357 Msa0177490:five_prime_UTR
ATTGAAAAGTGGATTTGGAA+GGG 0.595639 1_4:+64496168 None:intergenic
GCAAGAACTTGGTAGCAGCT+GGG 0.602600 1_4:+64493766 None:intergenic
CAAGCTATTGAGAAATGGGA+TGG 0.608067 1_4:-64493741 Msa0177490:CDS
AGGTAAAATATGGCTGGGAA+CGG 0.608912 1_4:-64492762 Msa0177490:three_prime_UTR
GTTTCAAAGGACAATGCCAA+TGG 0.609689 1_4:-64495321 Msa0177490:CDS
TAATGCTAATGGCATAGTTG+AGG 0.614779 1_4:-64492782 Msa0177490:three_prime_UTR
AAGGTTGTCTCCATGTGGAG+TGG 0.617242 1_4:+64495712 None:intergenic
AGAAAGTCAGGATCTTGCAC+AGG 0.618105 1_4:-64493718 Msa0177490:intron
TTAGATGACACCCCATCGGA+AGG 0.624311 1_4:-64496361 Msa0177490:five_prime_UTR
AACCAGGCTATGTCACAGCA+TGG 0.630192 1_4:-64493169 Msa0177490:CDS
AGAACAGGGGTTATCCGGCA+AGG 0.630194 1_4:+64496310 None:intergenic
GAATCGAAGATGAAGATGAG+TGG 0.647123 1_4:-64496248 Msa0177490:exon
GAATGAGCATGGTGATGAAG+TGG 0.647716 1_4:+64496121 None:intergenic
GAACTTGTTGGAATGACGAA+AGG 0.650620 1_4:-64493023 Msa0177490:CDS
ATAAATGAGATGTATCAGGT+CGG 0.651955 1_4:-64494395 Msa0177490:CDS
TGGCATACTTGAAAATACAC+AGG 0.652514 1_4:-64492940 Msa0177490:three_prime_UTR
TCAGTTCCTTCCTTCCGATG+GGG 0.653132 1_4:+64496351 None:intergenic
TAGATTAGATGACACCCCAT+CGG 0.656218 1_4:-64496365 Msa0177490:five_prime_UTR
GTTATAAAAGAAAGAAAACA+AGG 0.656972 1_4:+64492679 None:intergenic
CTCAGGGAATGACTTTACAG+TGG 0.658371 1_4:-64494528 Msa0177490:intron
TCTCAGGAGCAAGTCAGAAG+CGG 0.661265 1_4:-64493849 Msa0177490:intron
GTATCAAGGTTGTCTCCATG+TGG 0.667949 1_4:+64495707 None:intergenic
ACCTTGATACAGTCAAGAGT+AGG 0.669920 1_4:-64495694 Msa0177490:CDS
AAAGCTGTGAATATTCAACC+AGG 0.675945 1_4:-64493185 Msa0177490:CDS
AAAATGGGTTACAAAAGCCG+TGG 0.683895 1_4:-64492708 Msa0177490:three_prime_UTR
TTGGTGCAGTGATGTTGCGG+AGG 0.713741 1_4:-64493797 Msa0177490:CDS
CAGAAAGGTCAAGCTCTCTG+CGG 0.715909 1_4:+64494276 None:intergenic
AGAAAACAAGGAATTCACCA+CGG 0.721487 1_4:+64492691 None:intergenic
TGTTTCATATGCAAGTGACT+CGG 0.725351 1_4:-64494423 Msa0177490:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GCTTTAATCTTTTAATAAAA+GGG + chr1_4:64492830-64492849 None:intergenic 15.0%
!!! AGCTTTAATCTTTTAATAAA+AGG + chr1_4:64492831-64492850 None:intergenic 15.0%
!!! TCTTTATATTTTCTTAATCT+TGG + chr1_4:64493886-64493905 None:intergenic 15.0%
!!! AATTAATATTTTATCTGGTT+AGG - chr1_4:64494039-64494058 Msa0177490:intron 15.0%
!!! CATTTACTTTTTTGAAATTA+TGG - chr1_4:64494263-64494282 Msa0177490:CDS 15.0%
!! CTAGTAAAATAAGTTATATA+TGG - chr1_4:64495230-64495249 Msa0177490:intron 15.0%
!! TAAGTTATATATGGTTAATT+TGG - chr1_4:64495239-64495258 Msa0177490:intron 15.0%
!! TTAAGCAATGAATATATAAA+TGG + chr1_4:64496303-64496322 None:intergenic 15.0%
!!! TCATTGCTTAAATAATTTTT+TGG - chr1_4:64496312-64496331 Msa0177490:five_prime_UTR 15.0%
!!! CTTTAACAACATATTTTCAT+GGG - chr1_4:64492849-64492868 Msa0177490:three_prime_UTR 20.0%
!!! TTTAACAACATATTTTCATG+GGG - chr1_4:64492850-64492869 Msa0177490:three_prime_UTR 20.0%
!! ACATCAATGATATTATTAAG+TGG + chr1_4:64493294-64493313 None:intergenic 20.0%
!!! TTTTGTGAAAATGGTTATAA+GGG + chr1_4:64493613-64493632 None:intergenic 20.0%
!! TTTATCAAGATAAAACTAAC+GGG + chr1_4:64493801-64493820 None:intergenic 20.0%
!! GTTTATCAAGATAAAACTAA+CGG + chr1_4:64493802-64493821 None:intergenic 20.0%
!! ATATATCTCGATCATTATAT+CGG + chr1_4:64493840-64493859 None:intergenic 20.0%
!!! ATTTACTTTTCCAAATTACT+AGG - chr1_4:64493967-64493986 Msa0177490:intron 20.0%
!! AAAGAGTTTCGAAAATTAAA+GGG + chr1_4:64494124-64494143 None:intergenic 20.0%
!! TAAAGAGTTTCGAAAATTAA+AGG + chr1_4:64494125-64494144 None:intergenic 20.0%
!! CAGAAAGAGAATATTAAAAA+AGG + chr1_4:64494353-64494372 None:intergenic 20.0%
!!! CTTTTTTAATATTCTCTTTC+TGG - chr1_4:64494351-64494370 Msa0177490:CDS 20.0%
!! ATCCAAATCCATTAAATTTA+GGG + chr1_4:64494734-64494753 None:intergenic 20.0%
!! AATCCAAATCCATTAAATTT+AGG + chr1_4:64494735-64494754 None:intergenic 20.0%
!! AAATTAGATTTAAACGATCT+CGG + chr1_4:64494817-64494836 None:intergenic 20.0%
!! TACAGTAAACATGTAAAATT+TGG + chr1_4:64494937-64494956 None:intergenic 20.0%
!! AATATCTTGATTATGTTTGA+AGG - chr1_4:64495996-64496015 Msa0177490:intron 20.0%
!!! AACTTTTTTCCTTCTTATTT+TGG - chr1_4:64496050-64496069 Msa0177490:intron 20.0%
!! GTTATAAAAGAAAGAAAACA+AGG + chr1_4:64496229-64496248 None:intergenic 20.0%
!!! TGTTTTCTTTCTTTTATAAC+CGG - chr1_4:64496229-64496248 Msa0177490:CDS 20.0%
!! TTCTTTTTCCTGTCTAATTT+AGG - chr1_4:64492614-64492633 Msa0177490:three_prime_UTR 25.0%
!! GCTTTAACAACATATTTTCA+TGG - chr1_4:64492848-64492867 Msa0177490:three_prime_UTR 25.0%
!! TAAATTCTGTAACTGTTTCT+TGG - chr1_4:64492926-64492945 Msa0177490:three_prime_UTR 25.0%
!! AAATTCTGTAACTGTTTCTT+GGG - chr1_4:64492927-64492946 Msa0177490:three_prime_UTR 25.0%
!! GTCATTGAGTTAATTTTGTT+AGG + chr1_4:64493329-64493348 None:intergenic 25.0%
! TTATGAATGAAGTTCATGTT+TGG + chr1_4:64493444-64493463 None:intergenic 25.0%
! GTTCAAGACAAAACTAATAT+TGG + chr1_4:64493469-64493488 None:intergenic 25.0%
! TTTGTGAAAATGGTTATAAG+GGG + chr1_4:64493612-64493631 None:intergenic 25.0%
!! GTTTTGTGAAAATGGTTATA+AGG + chr1_4:64493614-64493633 None:intergenic 25.0%
! AAATTGAAAGAACGAAAACA+GGG + chr1_4:64493656-64493675 None:intergenic 25.0%
! AAAATTGAAAGAACGAAAAC+AGG + chr1_4:64493657-64493676 None:intergenic 25.0%
!!! GAAAAATGAAACTTGTTGTA+AGG - chr1_4:64493732-64493751 Msa0177490:CDS 25.0%
! ATGTGATTAACCTAGTAATT+TGG + chr1_4:64493980-64493999 None:intergenic 25.0%
!! CATAAACAATTCTGAACTTT+TGG + chr1_4:64494302-64494321 None:intergenic 25.0%
! AGATTAGACCCTAAATTTAA+TGG - chr1_4:64494723-64494742 Msa0177490:intron 25.0%
!!! TGTATGATTCTGTTTTTATC+TGG - chr1_4:64494953-64494972 Msa0177490:intron 25.0%
!! GGTTAATTTGGAATTTACTT+TGG - chr1_4:64495251-64495270 Msa0177490:intron 25.0%
!! ATTTGGAATTTACTTTGGAT+TGG - chr1_4:64495256-64495275 Msa0177490:intron 25.0%
!! ATTTACTTTGGATTGGAAAT+AGG - chr1_4:64495263-64495282 Msa0177490:intron 25.0%
!!! CATATTTTGGTGATGTATTA+CGG + chr1_4:64495294-64495313 None:intergenic 25.0%
! TTGTACAATTCTACCATTAT+TGG - chr1_4:64495564-64495583 Msa0177490:intron 25.0%
!! AACCTATATTGATTGATTTC+AGG + chr1_4:64495634-64495653 None:intergenic 25.0%
! TACAACTCACACTATAAATA+TGG - chr1_4:64495945-64495964 Msa0177490:intron 25.0%
!! GATTATGTTTGAAGGAATTT+TGG - chr1_4:64496004-64496023 Msa0177490:intron 25.0%
! TGTCAATTACTTAATGCTAA+TGG - chr1_4:64496112-64496131 Msa0177490:intron 25.0%
!! TTTAGAATTGAACACTGAAT+TGG + chr1_4:64496180-64496199 None:intergenic 25.0%
!! TTCAGTGTTCAATTCTAAAA+TGG - chr1_4:64496181-64496200 Msa0177490:CDS 25.0%
!!! TCAGTGTTCAATTCTAAAAT+GGG - chr1_4:64496182-64496201 Msa0177490:CDS 25.0%
! AATCATTGATGTTTATGTTC+TGG - chr1_4:64496338-64496357 Msa0177490:five_prime_UTR 25.0%
ATTAGACAGGAAAAAGAACA+GGG + chr1_4:64492612-64492631 None:intergenic 30.0%
AATTAGACAGGAAAAAGAAC+AGG + chr1_4:64492613-64492632 None:intergenic 30.0%
TGTTTGTTCCTAAATTAGAC+AGG + chr1_4:64492625-64492644 None:intergenic 30.0%
! ATTGAAAAGTGGATTTGGAA+GGG + chr1_4:64492740-64492759 None:intergenic 30.0%
TAGAATTACTTGAATGAGCA+TGG + chr1_4:64492798-64492817 None:intergenic 30.0%
AAACACATGCAAATTGGAAA+AGG + chr1_4:64492969-64492988 None:intergenic 30.0%
!!! TAGTTTTGTTACACTCTTAG+AGG - chr1_4:64493067-64493086 Msa0177490:CDS 30.0%
!!! AGTTTTGTTACACTCTTAGA+GGG - chr1_4:64493068-64493087 Msa0177490:CDS 30.0%
! TGCATGTTGATTGTTTAACT+TGG - chr1_4:64493121-64493140 Msa0177490:CDS 30.0%
TTACAGAAAGATTAAAGCCT+TGG - chr1_4:64493152-64493171 Msa0177490:CDS 30.0%
TACAGAAAGATTAAAGCCTT+GGG - chr1_4:64493153-64493172 Msa0177490:CDS 30.0%
!!! TCAATGACTTGCTTTTACTA+AGG - chr1_4:64493341-64493360 Msa0177490:intron 30.0%
AAATTAGTAGCCAGAAATCA+AGG + chr1_4:64493527-64493546 None:intergenic 30.0%
TATAAAGAAAAGTGATCACG+AGG - chr1_4:64493898-64493917 Msa0177490:intron 30.0%
TACTAGGTTAATCACATAAG+TGG - chr1_4:64493983-64494002 Msa0177490:intron 30.0%
!! GTTTATTATTGACTCCATGA+AGG + chr1_4:64494167-64494186 None:intergenic 30.0%
GAAGATAAATGAGATGTATC+AGG - chr1_4:64494506-64494525 Msa0177490:CDS 30.0%
ATAAATGAGATGTATCAGGT+CGG - chr1_4:64494510-64494529 Msa0177490:CDS 30.0%
!! GACCCTAAATTTAATGGATT+TGG - chr1_4:64494729-64494748 Msa0177490:intron 30.0%
TAATCTGAATTGTCTGATCT+CGG - chr1_4:64494847-64494866 Msa0177490:intron 30.0%
AAACATGTAAAATTTGGACC+CGG + chr1_4:64494931-64494950 None:intergenic 30.0%
ATAAAACAGCTAATTCCAAG+TGG + chr1_4:64495004-64495023 None:intergenic 30.0%
ACAATGGAAGAAAATGAGAA+AGG + chr1_4:64495037-64495056 None:intergenic 30.0%
ACCAAAATATGATACACCAT+AGG - chr1_4:64495303-64495322 Msa0177490:CDS 30.0%
! ACCTATGGTGTATCATATTT+TGG + chr1_4:64495307-64495326 None:intergenic 30.0%
TACAACTACTAGTGTTTGAA+CGG + chr1_4:64495549-64495568 None:intergenic 30.0%
ACAATTCTACCATTATTGGT+CGG - chr1_4:64495568-64495587 Msa0177490:intron 30.0%
ATATCAAAACCGACCAATAA+TGG + chr1_4:64495580-64495599 None:intergenic 30.0%
TTCAAAGTAGTTGTCAACAA+GGG + chr1_4:64495603-64495622 None:intergenic 30.0%
TTTCAAAGTAGTTGTCAACA+AGG + chr1_4:64495604-64495623 None:intergenic 30.0%
TGCCTGAAATCAATCAATAT+AGG - chr1_4:64495629-64495648 Msa0177490:intron 30.0%
TTATAGTGTGAGTTGTAGAA+TGG + chr1_4:64495942-64495961 None:intergenic 30.0%
!!! TCCTTCTTATTTTGGTAGAA+TGG - chr1_4:64496058-64496077 Msa0177490:intron 30.0%
ACCATTCTACCAAAATAAGA+AGG + chr1_4:64496062-64496081 None:intergenic 30.0%
ATATATAAATGGCAAGTTCG+TGG + chr1_4:64496292-64496311 None:intergenic 30.0%
ACTTTGTCCTTAGTAAAACA+TGG - chr1_4:64496373-64496392 Msa0177490:five_prime_UTR 30.0%
TTAGACAGGAAAAAGAACAG+GGG + chr1_4:64492611-64492630 None:intergenic 35.0%
CATCTTCGATTCTTCTTCTA+AGG + chr1_4:64492649-64492668 None:intergenic 35.0%
AAAGAGAAGGAGAAGAGTAA+GGG + chr1_4:64492707-64492726 None:intergenic 35.0%
! GATTGAAAAGTGGATTTGGA+AGG + chr1_4:64492741-64492760 None:intergenic 35.0%
! GGTAGATTGAAAAGTGGATT+TGG + chr1_4:64492745-64492764 None:intergenic 35.0%
TTCCAATTTGCATGTGTTTG+TGG - chr1_4:64492970-64492989 Msa0177490:three_prime_UTR 35.0%
! AATTGAGCAGTGATTTGTGT+TGG - chr1_4:64493002-64493021 Msa0177490:CDS 35.0%
! ATTGAGCAGTGATTTGTGTT+GGG - chr1_4:64493003-64493022 Msa0177490:CDS 35.0%
GACATGAAATGAAAACAACC+TGG + chr1_4:64493245-64493264 None:intergenic 35.0%
! TGCTTTTACTAAGGCATGTT+CGG - chr1_4:64493350-64493369 Msa0177490:intron 35.0%
! GAAGTTCATGTTTGGAATCA+CGG + chr1_4:64493436-64493455 None:intergenic 35.0%
ATGTTCACAACCTTGATTTC+TGG - chr1_4:64493514-64493533 Msa0177490:intron 35.0%
!! CTCGGATTGTTTTGTGAAAA+TGG + chr1_4:64493622-64493641 None:intergenic 35.0%
AACAGGGAATTACTTACTCT+CGG + chr1_4:64493640-64493659 None:intergenic 35.0%
TTTGCATACCATGAGTGAAT+TGG - chr1_4:64493693-64493712 Msa0177490:intron 35.0%
! TTCCTGATATCATGTTTTCC+AGG - chr1_4:64493772-64493791 Msa0177490:CDS 35.0%
! TCCTGATATCATGTTTTCCA+GGG - chr1_4:64493773-64493792 Msa0177490:CDS 35.0%
ATATCGGTACATTGTTTCAG+AGG + chr1_4:64493824-64493843 None:intergenic 35.0%
AATCTTGGCAGAATAGTCAA+TGG + chr1_4:64493871-64493890 None:intergenic 35.0%
TAATATCAAGATCACGAGTG+AGG - chr1_4:64494087-64494106 Msa0177490:intron 35.0%
TTATATTGCCCATTCATCTC+AGG + chr1_4:64494205-64494224 None:intergenic 35.0%
AAAAGGTAATGACTCAAGTG+TGG + chr1_4:64494336-64494355 None:intergenic 35.0%
TATTCTCTTTCTGGATTCTC+AGG - chr1_4:64494360-64494379 Msa0177490:CDS 35.0%
ATTCTCTTTCTGGATTCTCA+GGG - chr1_4:64494361-64494380 Msa0177490:CDS 35.0%
CAGTGGAAAATCTTCAAGAT+TGG - chr1_4:64494394-64494413 Msa0177490:CDS 35.0%
ATTGGAGAAAGTCATCCAAA+TGG - chr1_4:64494412-64494431 Msa0177490:CDS 35.0%
TTGGAGAAAGTCATCCAAAT+GGG - chr1_4:64494413-64494432 Msa0177490:CDS 35.0%
! AAAGTCATCCAAATGGGTTT+CGG - chr1_4:64494419-64494438 Msa0177490:CDS 35.0%
TCACTTGCATATGAAACATC+AGG + chr1_4:64494480-64494499 None:intergenic 35.0%
TGTTTCATATGCAAGTGACT+CGG - chr1_4:64494482-64494501 Msa0177490:CDS 35.0%
TAAATGAGATGTATCAGGTC+GGG - chr1_4:64494511-64494530 Msa0177490:CDS 35.0%
GCAGTAGCAAGTATATTAGT+TGG + chr1_4:64494557-64494576 None:intergenic 35.0%
! AATATACTTGCTACTGCTGT+TGG - chr1_4:64494560-64494579 Msa0177490:intron 35.0%
! ATATACTTGCTACTGCTGTT+GGG - chr1_4:64494561-64494580 Msa0177490:intron 35.0%
AGTAATACAAATGACACTGC+AGG + chr1_4:64494676-64494695 None:intergenic 35.0%
GTTTCTCTTGAACACATAGA+AGG - chr1_4:64494700-64494719 Msa0177490:intron 35.0%
! TCATTTTCTTCCATTGTCTC+AGG - chr1_4:64495040-64495059 Msa0177490:intron 35.0%
AATAGCTTGAAGCAAGAACT+TGG + chr1_4:64495153-64495172 None:intergenic 35.0%
TGCTTCAAGCTATTGAGAAA+TGG - chr1_4:64495159-64495178 Msa0177490:intron 35.0%
GCTTCAAGCTATTGAGAAAT+GGG - chr1_4:64495160-64495179 Msa0177490:intron 35.0%
ATATAGGTTTACAACGCTCT+TGG - chr1_4:64495645-64495664 Msa0177490:intron 35.0%
AAAGCTGTGAATATTCAACC+AGG - chr1_4:64495720-64495739 Msa0177490:CDS 35.0%
ATCCTAACAACAAGATTGCA+CGG - chr1_4:64495838-64495857 Msa0177490:intron 35.0%
! GATTCTTTGAAGGAACTTGT+TGG - chr1_4:64495870-64495889 Msa0177490:intron 35.0%
!! AAGGTGTTACTGTCAGATAT+AGG - chr1_4:64495901-64495920 Msa0177490:intron 35.0%
!! AGGTGTTACTGTCAGATATA+GGG - chr1_4:64495902-64495921 Msa0177490:intron 35.0%
TGGCATACTTGAAAATACAC+AGG - chr1_4:64495965-64495984 Msa0177490:intron 35.0%
TTGGTAGAATGGTGATAACA+AGG - chr1_4:64496069-64496088 Msa0177490:intron 35.0%
TAATGCTAATGGCATAGTTG+AGG - chr1_4:64496123-64496142 Msa0177490:CDS 35.0%
GGCATAGTTGAGGTAAAATA+TGG - chr1_4:64496133-64496152 Msa0177490:CDS 35.0%
TAGTTGAGGTAAAATATGGC+TGG - chr1_4:64496137-64496156 Msa0177490:CDS 35.0%
AGTTGAGGTAAAATATGGCT+GGG - chr1_4:64496138-64496157 Msa0177490:CDS 35.0%
AGAAAACAAGGAATTCACCA+CGG + chr1_4:64496217-64496236 None:intergenic 35.0%
TTACAATGCATGAAAACAGC+CGG + chr1_4:64496251-64496270 None:intergenic 35.0%
TAGATTAGATGACACCCCAT+CGG - chr1_4:64492540-64492559 Msa0177490:three_prime_UTR 40.0%
GAAAAAGAACAGGGGTTATC+CGG + chr1_4:64492603-64492622 None:intergenic 40.0%
GAATCGAAGATGAAGATGAG+TGG - chr1_4:64492657-64492676 Msa0177490:three_prime_UTR 40.0%
GTAAGGGAAATGAGTGAAAG+TGG + chr1_4:64492691-64492710 None:intergenic 40.0%
GAAAGAGAAGGAGAAGAGTA+AGG + chr1_4:64492708-64492727 None:intergenic 40.0%
GGTAAGGGTAGATTGAAAAG+TGG + chr1_4:64492751-64492770 None:intergenic 40.0%
GGTGAGTTTAGAAGAGGTAA+GGG + chr1_4:64492766-64492785 None:intergenic 40.0%
TGGTGAGTTTAGAAGAGGTA+AGG + chr1_4:64492767-64492786 None:intergenic 40.0%
TGAAGTGGTGAGTTTAGAAG+AGG + chr1_4:64492772-64492791 None:intergenic 40.0%
AGCCACAAACACATGCAAAT+TGG + chr1_4:64492975-64492994 None:intergenic 40.0%
! AGTGATTTGTGTTGGGACTT+GGG - chr1_4:64493010-64493029 Msa0177490:CDS 40.0%
ACCTTGATACAGTCAAGAGT+AGG - chr1_4:64493211-64493230 Msa0177490:CDS 40.0%
TCCTACTCTTGACTGTATCA+AGG + chr1_4:64493215-64493234 None:intergenic 40.0%
!! GTGAGTTTTTGGGAGAATCA+TGG - chr1_4:64493380-64493399 Msa0177490:intron 40.0%
CTGTCTTCGTCAATGATAGA+AGG + chr1_4:64493562-64493581 None:intergenic 40.0%
GACGAAGACAGATGTTTCAA+AGG - chr1_4:64493571-64493590 Msa0177490:intron 40.0%
GTTTCAAAGGACAATGCCAA+TGG - chr1_4:64493584-64493603 Msa0177490:intron 40.0%
ATGGTTATAAGGGGTTCCAT+TGG + chr1_4:64493603-64493622 None:intergenic 40.0%
ACATGACACCAATTCACTCA+TGG + chr1_4:64493704-64493723 None:intergenic 40.0%
TCCCTGGAAAACATGATATC+AGG + chr1_4:64493777-64493796 None:intergenic 40.0%
AAAGTGATCACGAGGTTTGT+AGG - chr1_4:64493906-64493925 Msa0177490:intron 40.0%
AAGTGATCACGAGGTTTGTA+GGG - chr1_4:64493907-64493926 Msa0177490:intron 40.0%
AGTGGATATAGACTATGTGC+AGG - chr1_4:64494001-64494020 Msa0177490:intron 40.0%
ATGCTTTGATGCAACCTTCA+TGG - chr1_4:64494150-64494169 Msa0177490:intron 40.0%
TGTTGAGACCTGAGATGAAT+GGG - chr1_4:64494194-64494213 Msa0177490:intron 40.0%
AAATGAGATGTATCAGGTCG+GGG - chr1_4:64494512-64494531 Msa0177490:CDS 40.0%
CTTGCAACTCTTTAGCAGAA+AGG + chr1_4:64494647-64494666 None:intergenic 40.0%
GTTTACTGCATGAAACTGTG+TGG - chr1_4:64494886-64494905 Msa0177490:intron 40.0%
CTGTGTGGAGTTATAACTGT+AGG - chr1_4:64494901-64494920 Msa0177490:intron 40.0%
AGTTATAACTGTAGGCGATC+CGG - chr1_4:64494909-64494928 Msa0177490:intron 40.0%
! AGTGGCTTGTGTATATGTCA+TGG + chr1_4:64494986-64495005 None:intergenic 40.0%
TGACATATACACAAGCCACT+TGG - chr1_4:64494986-64495005 Msa0177490:intron 40.0%
CAAGCTATTGAGAAATGGGA+TGG - chr1_4:64495164-64495183 Msa0177490:intron 40.0%
CATAGGTGCCAAATGTACAT+CGG - chr1_4:64495320-64495339 Msa0177490:CDS 40.0%
GTGACAAACCGATGTACATT+TGG + chr1_4:64495331-64495350 None:intergenic 40.0%
AGTGTTTGAACGGTTGCAAA+GGG + chr1_4:64495539-64495558 None:intergenic 40.0%
TAGTGTTTGAACGGTTGCAA+AGG + chr1_4:64495540-64495559 None:intergenic 40.0%
TCCTTCAAAGAATCTCTCCT+GGG + chr1_4:64495864-64495883 None:intergenic 40.0%
TTCCTTCAAAGAATCTCTCC+TGG + chr1_4:64495865-64495884 None:intergenic 40.0%
!! GAACTTGTTGGAATGACGAA+AGG - chr1_4:64495882-64495901 Msa0177490:intron 40.0%
!! TGGCTCTAGTGATGTATTCA+AGG - chr1_4:64496024-64496043 Msa0177490:intron 40.0%
AGGTAAAATATGGCTGGGAA+CGG - chr1_4:64496143-64496162 Msa0177490:CDS 40.0%
!! AAAATGGGTTACAAAAGCCG+TGG - chr1_4:64496197-64496216 Msa0177490:CDS 40.0%
ATAAATGGCAAGTTCGTGGA+AGG + chr1_4:64496288-64496307 None:intergenic 40.0%
AACACATACACACACCTTGC+CGG - chr1_4:64492581-64492600 Msa0177490:three_prime_UTR 45.0%
GGGAAGATAGAGGAAAGAGA+AGG + chr1_4:64492720-64492739 None:intergenic 45.0%
GGATTTGGAAGGGAAGATAG+AGG + chr1_4:64492730-64492749 None:intergenic 45.0%
! GAATGAGCATGGTGATGAAG+TGG + chr1_4:64492787-64492806 None:intergenic 45.0%
! CAGTGATTTGTGTTGGGACT+TGG - chr1_4:64493009-64493028 Msa0177490:CDS 45.0%
CCTTGGGAATTCAGCAAACA+GGG - chr1_4:64493169-64493188 Msa0177490:CDS 45.0%
GTATCAAGGTTGTCTCCATG+TGG + chr1_4:64493201-64493220 None:intergenic 45.0%
CAAGAGTAGGATTCTACTCC+AGG - chr1_4:64493224-64493243 Msa0177490:CDS 45.0%
CTAAGGCATGTTCGGATTGA+CGG - chr1_4:64493358-64493377 Msa0177490:intron 45.0%
! TCGGATTGACGGTGAGTTTT+TGG - chr1_4:64493369-64493388 Msa0177490:intron 45.0%
! CGGATTGACGGTGAGTTTTT+GGG - chr1_4:64493370-64493389 Msa0177490:intron 45.0%
GGTTTGTAGGGATGAACTAC+TGG - chr1_4:64493919-64493938 Msa0177490:intron 45.0%
TTCATCTCAGGTCTCAACAC+AGG + chr1_4:64494193-64494212 None:intergenic 45.0%
GTGTTGAGACCTGAGATGAA+TGG - chr1_4:64494193-64494212 Msa0177490:intron 45.0%
CTCAGGGAATGACTTTACAG+TGG - chr1_4:64494377-64494396 Msa0177490:CDS 45.0%
CAAGAATGCCGAAACCCATT+TGG + chr1_4:64494430-64494449 None:intergenic 45.0%
GTTATAACTGTAGGCGATCC+GGG - chr1_4:64494910-64494929 Msa0177490:intron 45.0%
!! AACTTGGTGCAGTGATGTTG+CGG - chr1_4:64495105-64495124 Msa0177490:intron 45.0%
GAAATGGGATGGAGAAAGTC+AGG - chr1_4:64495175-64495194 Msa0177490:intron 45.0%
AGAAAGTCAGGATCTTGCAC+AGG - chr1_4:64495187-64495206 Msa0177490:intron 45.0%
CGATGTACATTTGGCACCTA+TGG + chr1_4:64495322-64495341 None:intergenic 45.0%
GTGTCAGTTATGTTCGCGAT+GGG - chr1_4:64495667-64495686 Msa0177490:intron 45.0%
GTCACAGCATGGAACAATCT+TGG - chr1_4:64495747-64495766 Msa0177490:CDS 45.0%
AGAATATCCGTCTGCACTGA+AGG - chr1_4:64495791-64495810 Msa0177490:intron 45.0%
TCAAATGCCTTCAGTGCAGA+CGG + chr1_4:64495801-64495820 None:intergenic 45.0%
AAAATATGGCTGGGAACGGT+TGG - chr1_4:64496147-64496166 Msa0177490:CDS 45.0%
!!! AAATTAATTAATATTTTATC+TGG - chr1_4:64494034-64494053 Msa0177490:intron 5.0%
TTAGATGACACCCCATCGGA+AGG - chr1_4:64492544-64492563 Msa0177490:three_prime_UTR 50.0%
TCAGTTCCTTCCTTCCGATG+GGG + chr1_4:64492557-64492576 None:intergenic 50.0%
GTCAGTTCCTTCCTTCCGAT+GGG + chr1_4:64492558-64492577 None:intergenic 50.0%
TGTCAGTTCCTTCCTTCCGA+TGG + chr1_4:64492559-64492578 None:intergenic 50.0%
GATTTGTGTTGGGACTTGGG+AGG - chr1_4:64493013-64493032 Msa0177490:CDS 50.0%
TGTTGGGACTTGGGAGGTTT+AGG - chr1_4:64493019-64493038 Msa0177490:CDS 50.0%
GCCTTGGGAATTCAGCAAAC+AGG - chr1_4:64493168-64493187 Msa0177490:CDS 50.0%
! CCCTGTTTGCTGAATTCCCA+AGG + chr1_4:64493172-64493191 None:intergenic 50.0%
AAGGTTGTCTCCATGTGGAG+TGG + chr1_4:64493196-64493215 None:intergenic 50.0%
! ACGGTGAGTTTGACTGACTC+CGG + chr1_4:64493417-64493436 None:intergenic 50.0%
!! GATAAAACTAACGGGCTCCC+TGG + chr1_4:64493793-64493812 None:intergenic 50.0%
! GTCGGGGAGTTGTTTGACTT+AGG - chr1_4:64494528-64494547 Msa0177490:intron 50.0%
! CTACTGCTGTTGGGTTTGCT+CGG - chr1_4:64494570-64494589 Msa0177490:intron 50.0%
! TACTGCTGTTGGGTTTGCTC+GGG - chr1_4:64494571-64494590 Msa0177490:intron 50.0%
CAGAAAGGTCAAGCTCTCTG+CGG + chr1_4:64494632-64494651 None:intergenic 50.0%
!! CTGACTTGCTCCTGAGACAA+TGG + chr1_4:64495053-64495072 None:intergenic 50.0%
TCTCAGGAGCAAGTCAGAAG+CGG - chr1_4:64495056-64495075 Msa0177490:intron 50.0%
GCGACTGAGCTGTTTGAACT+TGG - chr1_4:64495089-64495108 Msa0177490:intron 50.0%
! GCAAGAACTTGGTAGCAGCT+GGG + chr1_4:64495142-64495161 None:intergenic 50.0%
! AGCAAGAACTTGGTAGCAGC+TGG + chr1_4:64495143-64495162 None:intergenic 50.0%
GTCAGGATCTTGCACAGGTT+AGG - chr1_4:64495192-64495211 Msa0177490:intron 50.0%
GGTGTCAGTTATGTTCGCGA+TGG - chr1_4:64495666-64495685 Msa0177490:intron 50.0%
CGCGATGGGAAGCTTGAAAA+AGG - chr1_4:64495681-64495700 Msa0177490:intron 50.0%
AACCAGGCTATGTCACAGCA+TGG - chr1_4:64495736-64495755 Msa0177490:CDS 50.0%
TTCCATGCTGTGACATAGCC+TGG + chr1_4:64495741-64495760 None:intergenic 50.0%
!! GGCCGTGCAATCTTGTTGTT+AGG + chr1_4:64495843-64495862 None:intergenic 50.0%
GCCCAGGAGAGATTCTTTGA+AGG - chr1_4:64495860-64495879 Msa0177490:intron 50.0%
ATGACACCCCATCGGAAGGA+AGG - chr1_4:64492548-64492567 Msa0177490:three_prime_UTR 55.0%
AGAACAGGGGTTATCCGGCA+AGG + chr1_4:64492598-64492617 None:intergenic 55.0%
CAAACAGGGTCCACTCCACA+TGG - chr1_4:64493183-64493202 Msa0177490:CDS 55.0%
!! AATCATGGTGCCACTGCCAC+CGG - chr1_4:64493395-64493414 Msa0177490:intron 55.0%
! GTGAGTTTGACTGACTCCGG+TGG + chr1_4:64493414-64493433 None:intergenic 55.0%
! ACTGCTGTTGGGTTTGCTCG+GGG - chr1_4:64494572-64494591 Msa0177490:intron 55.0%
GCTCTCTGCGGACAAGAACT+TGG + chr1_4:64494620-64494639 None:intergenic 55.0%
TTGGTGCAGTGATGTTGCGG+AGG - chr1_4:64495108-64495127 Msa0177490:intron 55.0%
ACAACAAGATTGCACGGCCC+AGG - chr1_4:64495844-64495863 Msa0177490:intron 55.0%
! TTGACTGACTCCGGTGGCAG+TGG + chr1_4:64493408-64493427 None:intergenic 60.0%
! TGTTGGGTTTGCTCGGGGCT+GGG - chr1_4:64494577-64494596 Msa0177490:intron 60.0%
GGCTGGGAACGGTTGGAAGA+CGG - chr1_4:64496154-64496173 Msa0177490:CDS 60.0%
! CTGTTGGGTTTGCTCGGGGC+TGG - chr1_4:64494576-64494595 Msa0177490:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 64492526 64496401 64492526 ID=Msa0177490;Name=Msa0177490
chr1_4 mRNA 64492526 64496401 64492526 ID=Msa0177490-mRNA-1;Parent=Msa0177490;Name=Msa0177490-mRNA-1;_AED=0.01;_eAED=0.01;_QI=140|1|1|1|0.6|0.83|6|466|335
chr1_4 exon 64492526 64493276 64492526 ID=Msa0177490-mRNA-1:exon:20974;Parent=Msa0177490-mRNA-1
chr1_4 exon 64493719 64493865 64493719 ID=Msa0177490-mRNA-1:exon:20973;Parent=Msa0177490-mRNA-1
chr1_4 exon 64494262 64494545 64494262 ID=Msa0177490-mRNA-1:exon:20972;Parent=Msa0177490-mRNA-1
chr1_4 exon 64495285 64495345 64495285 ID=Msa0177490-mRNA-1:exon:20971;Parent=Msa0177490-mRNA-1
chr1_4 exon 64495682 64495769 64495682 ID=Msa0177490-mRNA-1:exon:20970;Parent=Msa0177490-mRNA-1
chr1_4 exon 64496119 64496401 64496119 ID=Msa0177490-mRNA-1:exon:20969;Parent=Msa0177490-mRNA-1
chr1_4 five_prime_UTR 64496262 64496401 64496262 ID=Msa0177490-mRNA-1:five_prime_utr;Parent=Msa0177490-mRNA-1
chr1_4 CDS 64496119 64496261 64496119 ID=Msa0177490-mRNA-1:cds;Parent=Msa0177490-mRNA-1
chr1_4 CDS 64495682 64495769 64495682 ID=Msa0177490-mRNA-1:cds;Parent=Msa0177490-mRNA-1
chr1_4 CDS 64495285 64495345 64495285 ID=Msa0177490-mRNA-1:cds;Parent=Msa0177490-mRNA-1
chr1_4 CDS 64494262 64494545 64494262 ID=Msa0177490-mRNA-1:cds;Parent=Msa0177490-mRNA-1
chr1_4 CDS 64493719 64493865 64493719 ID=Msa0177490-mRNA-1:cds;Parent=Msa0177490-mRNA-1
chr1_4 CDS 64492992 64493276 64492992 ID=Msa0177490-mRNA-1:cds;Parent=Msa0177490-mRNA-1
chr1_4 three_prime_UTR 64492526 64492991 64492526 ID=Msa0177490-mRNA-1:three_prime_utr;Parent=Msa0177490-mRNA-1
Gene Sequence

>Msa0177490

ATGAAGATGAGTGGTTCTACTTCCACTTTCACTCATTTCCCTTACTCTTCTCCTTCTCTTTCCTCTATCTTCCCTTCCAAATCCACTTTTCAATCTACCCTTACCTCTTCTAAACTCACCACTTCATCACCATGCTCATTCAAAAAGATTAAAGCCTTGGGAATTCAGCAAACAGGGTCCACTCCACATGGAGACAACCTTGATACAGTCAAGAGTAGGATTCTACTCCAGATGTTTCAAAGGACAATGCCAATGGAACCCCTTATAACCATTTTCACAAAACAATCCGAGAGGAATGACTTTACAGTGGAAAATCTTCAAGATTGGAGAAAGTCATCCAAATGGGTTTCGGCATTCTTGTTTGCACAAACTATATCAGTTATTTCTCCTGATGTTTCATATGCAAGTGACTCGGTGAAGATAAATGAGATGTATCAGGTCGGGGAGTTGTTTGACTTAGGAATCCAACTAATATACTTGCTACTGCTGTTGGGTTTGCTCGGGGCTGGGACTTACTACGTGATTCGCCAAGTTCTTGTCCGCAGAGAGCTTGACCTTTCTGCTAAAGAGTTGCAAGAGCAAGTCAGAAGCGGTGATGCAAGTGCGACTGAGCTGTTTGAACTTGGTGCAGTGATGTTGCGGAGGAAATTTTACCCAGCTGCTACCAAGTTCTTGCTTCAAGCTATTGAGAAATGGGATGGAGAAAGTCAGGATCTTGCACAGGTTTACAACGCTCTTGGTGTCAGTTATGTTCGCGATGGGAAGCTTGAAAAAGGAATTGCTAAATTTGAGAAAGCTGTGAATATTCAACCAGGCTATGTCACAGCATGGAACAATCTTGGTGATGCATATGAAAGTAAAAAAGAATATCCGTCTGCACTGAAGGCATTTGAAGAAGTGCTTCTATTTGATCCTAACAACAAGATTGCACGGCCCAGGAGAGATTCTTTGAAGGAACTTGTTGGAATGACGAAAGGTGTTACTGTCAGATATAGGGAGAAGAAATGA

Protein sequence

>Msa0177490

MKMSGSTSTFTHFPYSSPSLSSIFPSKSTFQSTLTSSKLTTSSPCSFKKIKALGIQQTGSTPHGDNLDTVKSRILLQMFQRTMPMEPLITIFTKQSERNDFTVENLQDWRKSSKWVSAFLFAQTISVISPDVSYASDSVKINEMYQVGELFDLGIQLIYLLLLLGLLGAGTYYVIRQVLVRRELDLSAKELQEQVRSGDASATELFELGAVMLRRKFYPAATKFLLQAIEKWDGESQDLAQVYNALGVSYVRDGKLEKGIAKFEKAVNIQPGYVTAWNNLGDAYESKKEYPSALKAFEEVLLFDPNNKIARPRRDSLKELVGMTKGVTVRYREKK*