AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0009800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0009800 MtrunA17_Chr1g0158881 90.343 787 12 5 1 732 1 778 0.0 1409
Msa0009800 MtrunA17_Chr3g0135761 50.404 619 226 13 156 725 79 665 0.0 559
Msa0009800 MtrunA17_Chr3g0135721 48.287 642 244 11 143 728 66 675 0.0 559
Msa0009800 MtrunA17_Chr5g0432631 56.250 480 158 7 268 708 195 661 7.99e-173 517
Msa0009800 MtrunA17_Chr8g0362771 54.584 469 167 6 302 728 225 689 4.26e-169 503
Msa0009800 MtrunA17_Chr5g0432641 52.941 442 170 4 305 708 182 623 2.04e-144 437
Msa0009800 MtrunA17_Chr4g0052411 47.884 449 184 3 314 713 230 677 1.12e-127 395
Msa0009800 MtrunA17_Chr2g0297281 47.991 448 184 4 314 713 287 733 3.97e-126 393
Msa0009800 MtrunA17_Chr7g0217421 53.552 366 164 3 305 666 32 395 7.28e-126 380
Msa0009800 MtrunA17_Chr3g0143721 47.692 455 185 5 307 709 244 697 7.29e-126 391
Msa0009800 MtrunA17_Chr7g0248361 48.209 363 177 4 310 664 189 548 1.04e-105 336
Msa0009800 MtrunA17_Chr6g0476861 44.643 392 196 5 283 664 173 553 1.10e-104 335
Msa0009800 MtrunA17_Chr7g0260601 40.741 486 227 10 284 717 214 690 2.25e-103 332
Msa0009800 MtrunA17_Chr4g0031821 40.260 539 257 12 246 726 254 785 2.42e-103 335
Msa0009800 MtrunA17_Chr5g0432391 43.823 429 152 6 309 701 49 424 2.51e-99 313
Msa0009800 MtrunA17_Chr5g0429571 49.311 363 164 9 314 660 314 672 5.93e-95 312
Msa0009800 MtrunA17_Chr3g0104211 48.199 361 171 7 314 660 305 663 5.24e-94 309
Msa0009800 MtrunA17_Chr3g0094871 45.378 357 171 6 315 664 13 352 5.02e-93 296
Msa0009800 MtrunA17_Chr2g0331161 39.908 436 212 10 315 708 417 844 2.88e-80 274
Msa0009800 MtrunA17_Chr8g0388371 43.478 368 184 7 315 661 406 770 5.12e-80 274
Msa0009800 MtrunA17_Chr1g0168321 41.047 363 166 5 310 664 161 483 6.02e-80 264
Msa0009800 MtrunA17_Chr3g0135791 48.638 257 92 2 501 722 7 258 3.19e-74 242
Msa0009800 MtrunA17_Chr6g0456351 49.259 270 134 2 304 570 308 577 3.02e-71 244
Msa0009800 MtrunA17_Chr3g0135781 60.440 182 63 3 290 470 40 213 2.63e-65 215
Msa0009800 MtrunA17_Chr3g0129971 35.828 441 237 9 309 704 292 731 8.82e-59 213
Msa0009800 MtrunA17_Chr3g0135741 60.448 134 53 0 501 634 5 138 7.43e-53 179
Msa0009800 MtrunA17_Chr8g0357301 32.552 384 211 7 316 665 473 842 1.19e-51 194
Msa0009800 MtrunA17_Chr1g0180791 40.856 257 143 4 288 539 457 709 1.05e-50 190
Msa0009800 MtrunA17_Chr1g0180791 42.601 223 126 2 315 535 207 429 1.37e-44 172
Msa0009800 MtrunA17_Chr2g0327121 40.625 256 143 4 289 539 460 711 5.41e-50 187
Msa0009800 MtrunA17_Chr2g0327121 42.601 223 126 2 315 535 209 431 5.07e-45 173
Msa0009800 MtrunA17_Chr1g0192151 43.578 218 118 2 309 521 163 380 2.24e-49 179
Msa0009800 MtrunA17_Chr3g0141901 43.111 225 121 3 314 532 137 360 2.29e-49 178
Msa0009800 MtrunA17_Chr4g0014731 43.578 218 118 2 309 521 164 381 2.83e-49 179
Msa0009800 MtrunA17_Chr7g0264521 39.689 257 146 4 288 539 458 710 3.29e-49 185
Msa0009800 MtrunA17_Chr7g0264521 42.152 223 127 2 315 535 208 430 3.17e-44 171
Msa0009800 MtrunA17_Chr3g0145011 42.667 225 122 3 314 532 140 363 6.13e-49 177
Msa0009800 MtrunA17_Chr4g0050561 38.976 254 149 2 314 561 157 410 1.13e-48 177
Msa0009800 MtrunA17_Chr8g0345461 36.863 255 156 2 309 558 161 415 1.54e-47 174
Msa0009800 MtrunA17_Chr7g0255651 42.918 233 117 4 314 534 283 511 4.36e-47 176
Msa0009800 MtrunA17_Chr7g0255651 30.841 214 135 5 332 534 29 240 2.37e-19 92.4
Msa0009800 MtrunA17_Chr1g0182711 37.600 250 147 3 312 554 187 434 4.63e-46 170
Msa0009800 MtrunA17_Chr7g0262801 37.600 250 147 3 312 554 186 433 6.21e-46 170
Msa0009800 MtrunA17_Chr1g0200081 36.471 255 156 3 309 558 171 424 2.43e-45 168
Msa0009800 MtrunA17_Chr3g0108321 43.979 191 98 3 309 492 155 343 3.45e-43 160
Msa0009800 MtrunA17_Chr2g0277831 41.593 226 127 4 311 532 532 756 4.82e-43 167
Msa0009800 MtrunA17_Chr2g0277831 43.636 220 119 2 315 529 245 464 2.61e-41 162
Msa0009800 MtrunA17_Chr7g0255721 39.516 248 146 3 304 547 676 923 3.93e-42 165
Msa0009800 MtrunA17_Chr7g0255721 39.801 201 119 2 341 539 413 613 2.15e-31 131
Msa0009800 MtrunA17_Chr7g0255691 40.948 232 129 3 314 537 287 518 8.33e-41 157
Msa0009800 MtrunA17_Chr7g0255691 36.681 229 129 6 318 535 22 245 2.30e-27 117
Msa0009800 MtrunA17_Chr3g0086411 37.586 290 146 10 308 576 211 486 7.76e-39 150
Msa0009800 MtrunA17_Chr3g0086411 38.728 173 76 5 400 560 7 161 1.21e-20 96.3
Msa0009800 MtrunA17_Chr7g0255641 37.097 248 152 3 304 547 649 896 4.46e-38 152
Msa0009800 MtrunA17_Chr7g0255641 39.512 205 114 6 328 528 411 609 1.50e-29 125
Msa0009800 MtrunA17_Chr4g0026631 40.773 233 122 10 302 525 116 341 1.03e-37 146
Msa0009800 MtrunA17_Chr2g0316851 38.197 233 134 5 309 532 590 821 5.65e-37 149
Msa0009800 MtrunA17_Chr8g0387641 38.934 244 137 7 300 535 507 746 1.44e-36 147
Msa0009800 MtrunA17_Chr4g0043381 34.866 261 164 4 315 569 839 1099 2.60e-36 147
Msa0009800 MtrunA17_Chr1g0190401 27.912 498 246 14 317 707 681 1172 3.40e-36 147
Msa0009800 MtrunA17_Chr3g0086401 38.000 250 132 6 308 535 381 629 7.76e-36 144
Msa0009800 MtrunA17_Chr3g0086401 37.555 229 128 5 309 525 88 313 4.95e-32 132
Msa0009800 MtrunA17_Chr2g0321241 38.793 232 128 8 302 525 121 346 1.02e-35 140
Msa0009800 MtrunA17_Chr1g0202381 38.819 237 135 7 302 531 456 689 1.29e-35 144
Msa0009800 MtrunA17_Chr6g0462581 40.164 244 133 8 300 535 486 724 1.66e-35 144
Msa0009800 MtrunA17_Chr1g0202371 37.815 238 139 7 300 531 383 617 2.21e-34 140
Msa0009800 MtrunA17_Chr5g0397121 36.641 262 149 8 287 535 481 738 6.66e-34 139
Msa0009800 MtrunA17_Chr1g0195741 38.912 239 133 7 300 529 924 1158 1.01e-33 139
Msa0009800 MtrunA17_Chr1g0204031 38.174 241 139 8 302 535 545 782 1.16e-33 138
Msa0009800 MtrunA17_Chr6g0459561 36.864 236 138 7 302 530 371 602 3.98e-33 135
Msa0009800 MtrunA17_Chr4g0004121 33.550 307 176 9 272 554 195 497 6.23e-33 134
Msa0009800 MtrunA17_Chr3g0116131 37.657 239 136 7 300 529 888 1122 1.00e-32 136
Msa0009800 MtrunA17_Chr1g0195731 36.820 239 138 7 300 529 920 1154 1.14e-32 135
Msa0009800 MtrunA17_Chr5g0432671 55.455 110 45 1 509 618 3 108 3.56e-32 120
Msa0009800 MtrunA17_Chr7g0255901 35.371 229 141 5 311 533 638 865 3.57e-32 134
Msa0009800 MtrunA17_Chr4g0033451 34.444 270 166 6 314 574 381 648 1.53e-31 132
Msa0009800 MtrunA17_Chr2g0327231 41.420 169 91 4 304 467 340 505 2.94e-31 128
Msa0009800 MtrunA17_Chr4g0052271 37.168 226 133 6 311 531 118 339 3.22e-31 126
Msa0009800 MtrunA17_Chr4g0038101 37.004 227 135 5 315 535 723 947 6.16e-31 130
Msa0009800 MtrunA17_Chr3g0127431 37.387 222 128 6 315 529 86 303 5.25e-29 120
Msa0009800 MtrunA17_Chr3g0127401 33.091 275 160 8 315 572 83 350 5.84e-28 116
Msa0009800 MtrunA17_Chr6g0459541 30.435 276 148 9 300 539 29 296 3.88e-27 113
Msa0009800 MtrunA17_Chr7g0246111 36.199 221 133 6 315 530 214 431 1.42e-26 114
Msa0009800 MtrunA17_Chr6g0459551 35.678 199 119 7 295 490 84 276 9.82e-25 107
Msa0009800 MtrunA17_Chr2g0289231 30.888 259 157 6 275 522 268 515 3.32e-23 104
Msa0009800 MtrunA17_Chr4g0047411 33.493 209 121 5 338 529 202 409 1.98e-21 99.8
Msa0009800 MtrunA17_Chr5g0432681 47.000 100 40 3 622 708 1 100 2.04e-15 75.1
Msa0009800 MtrunA17_Chr8g0392971 38.144 97 59 1 518 613 51 147 6.46e-14 70.1
Msa0009800 MtrunA17_Chr4g0039781 28.761 226 126 8 350 547 370 588 5.51e-12 69.3
Msa0009800 MtrunA17_Chr4g0062081 41.558 77 43 2 317 391 11 87 3.70e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0009800 AT5G53170.1 72.546 754 142 7 42 732 55 806 0.0 1037
Msa0009800 AT2G26140.1 50.322 622 222 10 154 721 80 668 0.0 571
Msa0009800 AT5G15250.1 48.107 449 183 3 314 713 222 669 1.03e-131 406
Msa0009800 AT1G06430.1 48.214 448 183 4 314 713 218 664 1.96e-126 392
Msa0009800 AT1G06430.3 48.214 448 183 4 314 713 218 664 1.96e-126 392
Msa0009800 AT1G06430.2 48.214 448 183 4 314 713 218 664 1.96e-126 392
Msa0009800 AT2G30950.1 47.991 448 184 4 314 713 225 671 3.37e-125 389
Msa0009800 AT2G30950.2 47.991 448 184 4 314 713 225 671 3.37e-125 389
Msa0009800 AT2G30950.3 47.991 448 184 4 314 713 225 671 3.37e-125 389
Msa0009800 AT2G30950.4 47.991 448 184 4 314 713 229 675 3.61e-125 389
Msa0009800 AT5G42270.1 47.033 455 188 5 307 709 242 695 1.79e-123 385
Msa0009800 AT1G50250.1 46.593 455 190 5 307 709 254 707 2.88e-123 385
Msa0009800 AT1G07510.1 42.105 456 208 11 310 715 321 770 2.24e-103 335
Msa0009800 AT2G29080.1 43.304 448 199 9 310 708 316 757 6.60e-103 334
Msa0009800 AT3G47060.1 48.641 368 167 10 314 664 323 685 5.30e-95 313
Msa0009800 AT5G58870.1 47.956 367 171 9 314 664 327 689 9.59e-95 312
Msa0009800 AT5G15250.2 54.422 294 106 4 314 580 222 514 1.63e-94 303
Msa0009800 AT4G23940.1 43.935 371 184 8 315 664 429 796 7.66e-80 275
Msa0009800 AT3G16290.1 37.358 439 233 6 315 715 409 843 2.82e-77 266
Msa0009800 AT3G02450.1 51.210 248 118 2 315 559 333 580 1.12e-71 246
Msa0009800 AT5G64580.1 32.768 531 285 15 243 704 221 748 6.77e-59 214
Msa0009800 AT3G05530.1 44.495 218 116 2 309 521 164 381 4.33e-50 181
Msa0009800 AT1G79560.1 30.909 385 218 8 315 665 492 862 4.56e-50 189
Msa0009800 AT1G79560.3 30.909 385 218 7 315 665 492 862 4.80e-50 189
Msa0009800 AT1G79560.2 30.909 385 218 8 315 665 492 862 5.36e-50 189
Msa0009800 AT1G45000.1 43.556 225 120 3 314 532 137 360 3.85e-49 178
Msa0009800 AT3G53230.1 39.676 247 143 3 298 539 464 709 1.16e-48 184
Msa0009800 AT3G53230.1 41.704 223 128 2 315 535 207 429 9.53e-44 169
Msa0009800 AT5G19990.2 38.976 254 149 2 314 561 101 354 2.24e-48 175
Msa0009800 AT5G43010.1 42.667 225 122 3 314 532 137 360 4.32e-48 175
Msa0009800 AT1G53780.3 37.354 257 152 4 309 558 332 586 4.59e-48 179
Msa0009800 AT1G53780.1 37.354 257 152 4 309 558 333 587 4.80e-48 179
Msa0009800 AT1G53780.4 37.354 257 152 4 309 558 333 587 4.80e-48 179
Msa0009800 AT5G19990.1 38.976 254 149 2 314 561 159 412 5.84e-48 175
Msa0009800 AT5G19990.3 38.976 254 149 2 314 561 159 412 5.84e-48 175
Msa0009800 AT1G53780.2 37.354 257 152 4 309 558 354 608 6.79e-48 179
Msa0009800 AT5G03340.1 39.676 247 143 3 298 539 463 708 7.42e-48 182
Msa0009800 AT5G03340.1 42.152 223 127 2 315 535 206 428 2.60e-44 171
Msa0009800 AT5G20000.1 38.976 254 149 2 314 561 159 412 7.48e-48 175
Msa0009800 AT1G09100.1 43.119 218 119 2 309 521 163 380 9.86e-48 175
Msa0009800 AT1G53750.1 32.249 338 218 5 230 558 80 415 2.17e-47 174
Msa0009800 AT3G09840.1 39.919 248 142 3 298 539 463 709 1.27e-46 178
Msa0009800 AT3G09840.1 42.152 223 127 2 315 535 206 428 2.34e-44 171
Msa0009800 AT3G56690.1 41.423 239 136 3 304 538 712 950 4.11e-45 174
Msa0009800 AT3G56690.1 35.610 205 130 2 328 530 397 601 3.79e-33 137
Msa0009800 AT5G58290.1 35.587 281 165 4 259 532 105 376 1.82e-44 165
Msa0009800 AT4G29040.1 36.000 250 151 3 312 554 184 431 1.23e-43 164
Msa0009800 AT2G20140.1 36.694 248 152 2 312 554 184 431 1.66e-43 163
Msa0009800 AT3G01610.1 43.534 232 117 4 314 532 231 461 2.39e-40 159
Msa0009800 AT3G01610.1 41.071 224 128 4 315 535 527 749 4.73e-36 146
Msa0009800 AT3G01610.2 43.534 232 117 4 314 532 231 461 2.50e-40 159
Msa0009800 AT3G01610.2 41.071 224 128 4 315 535 527 749 5.17e-36 146
Msa0009800 AT2G03670.1 40.870 230 130 2 302 525 272 501 7.49e-40 155
Msa0009800 AT2G03670.1 31.579 247 161 3 317 555 23 269 3.33e-27 117
Msa0009800 AT1G64110.5 39.754 244 135 7 300 535 502 741 2.86e-37 150
Msa0009800 AT1G64110.3 39.754 244 135 7 300 535 502 741 2.86e-37 150
Msa0009800 AT1G64110.1 39.754 244 135 7 300 535 499 738 2.88e-37 150
Msa0009800 AT1G64110.2 39.754 244 135 7 300 535 504 743 3.17e-37 150
Msa0009800 AT1G64110.4 39.754 244 135 7 300 535 504 743 3.17e-37 150
Msa0009800 AT5G08470.3 37.611 226 133 3 315 535 834 1056 1.90e-36 148
Msa0009800 AT5G08470.1 37.611 226 133 3 315 535 843 1065 2.00e-36 148
Msa0009800 AT3G15120.1 39.224 232 131 5 310 532 713 943 3.13e-36 147
Msa0009800 AT3G15120.2 39.224 232 131 5 310 532 723 953 3.27e-36 147
Msa0009800 AT4G28000.3 38.525 244 137 8 300 535 503 741 7.90e-36 145
Msa0009800 AT4G28000.1 38.525 244 137 8 300 535 501 739 8.23e-36 145
Msa0009800 AT4G28000.2 38.525 244 137 8 300 535 503 741 8.96e-36 145
Msa0009800 AT2G27600.1 38.362 232 129 8 302 525 118 343 5.14e-35 139
Msa0009800 AT3G04340.1 27.565 497 255 14 315 708 783 1277 1.69e-34 142
Msa0009800 AT1G05910.1 33.013 312 187 8 272 574 348 646 5.36e-34 140
Msa0009800 AT5G52882.1 38.115 244 138 8 300 535 500 738 7.72e-34 139
Msa0009800 AT1G03000.1 34.934 229 142 5 311 533 654 881 1.47e-33 139
Msa0009800 AT1G80350.1 35.379 277 157 8 272 530 189 461 2.25e-33 135
Msa0009800 AT4G02480.1 37.657 239 136 7 300 529 946 1180 3.31e-33 138
Msa0009800 AT1G02890.1 37.238 239 137 7 300 529 927 1161 5.84e-33 137
Msa0009800 AT2G34560.1 36.842 228 132 7 311 531 99 321 2.24e-32 130
Msa0009800 AT2G34560.2 36.842 228 132 7 311 531 108 330 3.15e-32 129
Msa0009800 AT2G45500.4 38.298 235 132 8 315 541 82 311 3.60e-32 128
Msa0009800 AT2G45500.3 38.298 235 132 8 315 541 82 311 3.60e-32 128
Msa0009800 AT3G27120.1 36.864 236 138 7 302 530 389 620 5.11e-32 133
Msa0009800 AT2G45500.2 38.298 235 132 8 315 541 215 444 3.52e-31 128
Msa0009800 AT2G45500.1 38.298 235 132 8 315 541 219 448 4.20e-31 128
Msa0009800 AT2G45500.5 38.298 235 132 8 315 541 225 454 4.50e-31 128
Msa0009800 AT1G50140.2 37.004 227 135 5 315 535 691 915 1.65e-30 129
Msa0009800 AT1G50140.5 37.004 227 135 5 315 535 691 915 1.65e-30 129
Msa0009800 AT1G50140.3 37.004 227 135 5 315 535 713 937 1.71e-30 129
Msa0009800 AT1G50140.1 37.004 227 135 5 315 535 713 937 1.71e-30 129
Msa0009800 AT1G50140.4 37.004 227 135 5 315 535 713 937 1.71e-30 129
Msa0009800 AT4G24860.1 35.366 246 147 6 302 539 806 1047 3.49e-30 128
Msa0009800 AT4G24860.3 35.366 246 147 6 302 539 804 1045 3.58e-30 128
Msa0009800 AT4G24860.4 35.366 246 147 6 302 539 779 1020 4.60e-30 128
Msa0009800 AT4G24860.2 35.366 246 147 6 302 539 802 1043 4.89e-30 128
Msa0009800 AT3G19740.1 36.564 227 136 5 315 535 703 927 3.19e-29 125
Msa0009800 AT2G03670.2 31.579 247 161 3 317 555 23 269 6.55e-28 117
Msa0009800 AT2G03670.2 38.816 152 87 2 302 447 272 423 1.96e-18 89.0
Msa0009800 AT5G53540.1 32.246 276 161 10 315 572 86 353 9.75e-27 114
Msa0009800 AT1G45000.2 44.286 140 71 3 314 447 137 275 1.28e-26 112
Msa0009800 AT1G62130.1 34.553 246 139 8 301 539 738 968 1.85e-26 116
Msa0009800 AT1G62130.2 34.553 246 139 8 301 539 731 961 2.15e-26 116
Msa0009800 AT4G04180.2 32.927 246 134 9 314 545 312 540 3.87e-26 114
Msa0009800 AT4G04180.1 32.927 246 134 9 314 545 317 545 4.62e-26 114
Msa0009800 AT4G27680.1 35.586 222 132 6 315 529 83 300 2.83e-25 109
Msa0009800 AT4G04910.1 34.615 208 118 5 338 528 239 445 3.33e-21 99.4
Msa0009800 AT1G02890.2 32.218 239 121 9 300 529 927 1133 2.03e-20 97.4
Msa0009800 AT5G08470.2 34.459 148 89 3 315 457 843 987 1.41e-18 91.3

Find 205 sgRNAs with CRISPR-Local

Find 638 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCAAAAGACCGAATAATTA+TGG 0.162907 1_1:+14651527 Msa0009800:CDS
CTGTACGTCTGTCAGGTTTA+TGG 0.212295 1_1:+14647848 Msa0009800:intron
TGTGAAAGCTCTTCTGAAAA+AGG 0.225750 1_1:+14653565 Msa0009800:CDS
ACTTCCTTGTTTAGCTCCTT+TGG 0.240049 1_1:-14647951 None:intergenic
CTTCCTTGTTTAGCTCCTTT+GGG 0.240432 1_1:-14647950 None:intergenic
TGTATTACTGTACTAATTAT+AGG 0.249409 1_1:+14653954 Msa0009800:three_prime_UTR
TCTTATCATAAGATGATTAT+AGG 0.256040 1_1:+14654056 Msa0009800:three_prime_UTR
TGCTTTAATATCTACATTAT+CGG 0.257297 1_1:-14651276 None:intergenic
TCTTCTTGTTCCTGTTGTTC+TGG 0.277378 1_1:-14653886 None:intergenic
GAGGAATCTGGAAAACCTTC+TGG 0.290339 1_1:+14646214 Msa0009800:CDS
CTGTTCATGCTCAGGTTTGT+TGG 0.298475 1_1:+14650495 Msa0009800:intron
TCGGAGATAGGTTCGGGATT+AGG 0.299455 1_1:-14644515 None:intergenic
CAGTTGAATTTAACGGTTCT+AGG 0.302745 1_1:-14644550 None:intergenic
TTGGGTGGGATTGGTTCTTC+AGG 0.312707 1_1:+14647903 Msa0009800:CDS
TTGGAGGCAGGAGAAGAAAT+TGG 0.328754 1_1:+14644774 Msa0009800:CDS
TGTACGTCTGTCAGGTTTAT+GGG 0.331741 1_1:+14647849 Msa0009800:intron
TGGTTGATTGGTGGCCGTTT+TGG 0.339106 1_1:+14644755 Msa0009800:CDS
GTTGCAGAAGAACTTATCTT+TGG 0.341319 1_1:+14652971 Msa0009800:CDS
CGACCACGTACATCTGGATT+TGG 0.346610 1_1:-14651212 None:intergenic
GTATTACTGTACTAATTATA+GGG 0.346984 1_1:+14653955 Msa0009800:three_prime_UTR
GATGTGCACCGTCGGTATTA+AGG 0.351938 1_1:-14652817 None:intergenic
ATGCCCCGTGGATCTGCTTT+AGG 0.353616 1_1:+14652860 Msa0009800:CDS
TTTCAGGGGATTCTTCTGAC+TGG 0.361761 1_1:+14649047 Msa0009800:intron
AGCTCGTCTTGATGTTTGTA+TGG 0.361815 1_1:+14652940 Msa0009800:CDS
ATTCTTCTGACTGGGGCACC+TGG 0.362651 1_1:+14649056 Msa0009800:CDS
GCAGCCGTTGCACGTGGTTA+TGG 0.373039 1_1:+14647468 Msa0009800:CDS
TATCTTCCTGATGAGGAATC+TGG 0.373257 1_1:+14646202 Msa0009800:CDS
GCTCTGTACCCATAATTATT+CGG 0.373668 1_1:-14651536 None:intergenic
GCAAAAGACCGAATAATTAT+GGG 0.375666 1_1:+14651528 Msa0009800:CDS
TTCAGGGGATTCTTCTGACT+GGG 0.379915 1_1:+14649048 Msa0009800:intron
GCTGTAGGGAATAATATTAA+TGG 0.382293 1_1:+14650877 Msa0009800:intron
CACGATCATATGCATCTCTA+AGG 0.382357 1_1:-14653544 None:intergenic
GAATTTAACGGTTCTAGGTT+AGG 0.386512 1_1:-14644545 None:intergenic
ACGTGGTCGGCAAGAAATAT+TGG 0.387425 1_1:+14651226 Msa0009800:CDS
CTGACTGGGGCACCTGGAAC+TGG 0.388772 1_1:+14649062 Msa0009800:CDS
TTAAGAAGAGTAGAGGGGTT+AGG 0.394457 1_1:-14644395 None:intergenic
ATGATTGTTGCCTTGTGAAT+TGG 0.395594 1_1:-14652839 None:intergenic
GGCTGCTTCTCAGATATTCC+AGG 0.398346 1_1:-14647451 None:intergenic
GCACCAACTTCTTGTTGAAA+TGG 0.405004 1_1:+14650766 Msa0009800:CDS
GAGTAGAGGGGTTAGGAATG+AGG 0.406531 1_1:-14644388 None:intergenic
CAACTTCTTGTTGAAATGGA+TGG 0.407414 1_1:+14650770 Msa0009800:CDS
ATGCTCAGGTTTGTTGGAGT+TGG 0.412642 1_1:+14650501 Msa0009800:intron
CGTGGTACCCCAGGATTCAA+TGG 0.413046 1_1:+14651305 Msa0009800:CDS
CCGTAGCTGTTGGATTGGTC+TGG 0.413106 1_1:+14647742 Msa0009800:CDS
TCTTGCCGACCACGTACATC+TGG 0.413497 1_1:-14651218 None:intergenic
GGGATTGGTTCTTCAGGTGT+TGG 0.413971 1_1:+14647909 Msa0009800:CDS
CCAGCTAAATTTACTCGCCT+TGG 0.415935 1_1:+14648617 Msa0009800:CDS
AAGTTGGTGCAATGTCTTCT+TGG 0.418332 1_1:-14650753 None:intergenic
AGGGGTTAGGAATGAGGAAT+GGG 0.419576 1_1:-14644382 None:intergenic
AGAGCTGGATCAAGAATATC+AGG 0.419594 1_1:-14650914 None:intergenic
GAGTTGAAACAGCGGGCATC+TGG 0.423089 1_1:+14647403 Msa0009800:CDS
CACCTGCCCCATTGAATCCT+GGG 0.423171 1_1:-14651313 None:intergenic
TCGTGCCGGTTCGGAATTTG+AGG 0.426524 1_1:+14649345 Msa0009800:CDS
ATCGGAAGCTTGGGTGGGAT+TGG 0.428528 1_1:+14647894 Msa0009800:CDS
TATTGATGTCTCATCATTTG+AGG 0.429070 1_1:-14652900 None:intergenic
ATGTGCACCGTCGGTATTAA+GGG 0.434842 1_1:-14652816 None:intergenic
TCACCTGCCCCATTGAATCC+TGG 0.435358 1_1:-14651314 None:intergenic
GCTATTAAAGCTGCGGTTGA+AGG 0.440549 1_1:+14651471 Msa0009800:CDS
GGGACCTTGAAGGCTATTGC+TGG 0.440814 1_1:+14649298 Msa0009800:intron
ACGATTACTTCTCCCGTATC+GGG 0.444184 1_1:+14653852 Msa0009800:CDS
GAGTGAAGGGAACGCGCGGG+TGG 0.445306 1_1:-14644445 None:intergenic
AGTGCAGAGAAGGGGAGTGA+AGG 0.448276 1_1:-14644459 None:intergenic
TTAGGAGAATCGTCGGAGAT+AGG 0.451508 1_1:-14644527 None:intergenic
TGAGGTTTAAGAAGAGTAGA+GGG 0.454074 1_1:-14644401 None:intergenic
AGGAAAACTTCCAGAACAAC+AGG 0.454950 1_1:+14653876 Msa0009800:CDS
GGTCGGGATAATGTCACAAC+TGG 0.455133 1_1:+14652992 Msa0009800:CDS
TGAAGGGAACGCGCGGGTGG+AGG 0.460103 1_1:-14644442 None:intergenic
CCAAGGCGAGTAAATTTAGC+TGG 0.460716 1_1:-14648617 None:intergenic
GTGGTACCCCAGGATTCAAT+GGG 0.461743 1_1:+14651306 Msa0009800:CDS
GTTTACCGTAGCTGTTGGAT+TGG 0.462751 1_1:+14647737 Msa0009800:CDS
AACTTCTTGTTGAAATGGAT+GGG 0.469351 1_1:+14650771 Msa0009800:CDS
GGACCTTTGTCATCGTTAGC+AGG 0.472984 1_1:-14654119 None:intergenic
GTGCTGTAGTATTCTAATAG+TGG 0.473458 1_1:-14654140 None:intergenic
GAATCGTCGGAGATAGGTTC+GGG 0.475079 1_1:-14644521 None:intergenic
GACGATTACTTCTCCCGTAT+CGG 0.475761 1_1:+14653851 Msa0009800:CDS
GCTAAATTTACTCGCCTTGG+AGG 0.476125 1_1:+14648620 Msa0009800:CDS
TTACTGAGGCCGATGCGAAT+CGG 0.479188 1_1:+14644806 Msa0009800:CDS
ACCTTCTGGAATTCCCTCCT+TGG 0.479898 1_1:+14646228 Msa0009800:CDS
ATTGATGTCTCATCATTTGA+GGG 0.480191 1_1:-14652899 None:intergenic
AACGCGCGGGTGGAGGCGCG+TGG 0.482203 1_1:-14644435 None:intergenic
AGAATCGTCGGAGATAGGTT+CGG 0.482753 1_1:-14644522 None:intergenic
CGGCTGTAGGTTTATCATGC+AGG 0.484405 1_1:-14651256 None:intergenic
TGATAAAGATATTTGAAGAA+AGG 0.484840 1_1:+14646107 Msa0009800:CDS
GCAAGAACTTGAGGAGGTTG+TGG 0.486955 1_1:+14648580 Msa0009800:CDS
TTTCGGAATTGGTTGATTGG+TGG 0.487125 1_1:+14644746 Msa0009800:CDS
CATCTCCTCAAATTCCGAAC+CGG 0.488253 1_1:-14649350 None:intergenic
TACACTAGATCTGGCAAACC+TGG 0.489864 1_1:+14651437 Msa0009800:intron
CAGAAGAACTTATCTTTGGT+CGG 0.491737 1_1:+14652975 Msa0009800:CDS
ATTGATGAAATTGATGCCGT+TGG 0.494452 1_1:+14650701 Msa0009800:CDS
AGAAGAACTTATCTTTGGTC+GGG 0.494681 1_1:+14652976 Msa0009800:CDS
CAAGGAAGTGATGCCAGAAA+AGG 0.496681 1_1:+14647965 Msa0009800:CDS
GGTTTGTTGGAGTTGGTGCT+CGG 0.497437 1_1:+14650508 Msa0009800:intron
GTGCAGAGAAGGGGAGTGAA+GGG 0.498083 1_1:-14644458 None:intergenic
GAGGGGTTAGGAATGAGGAA+TGG 0.499225 1_1:-14644383 None:intergenic
AGCAGAAGGGGATCTTGTAT+TGG 0.499724 1_1:+14653909 Msa0009800:CDS
TTCGGGATTAGGTTCGGAGT+GGG 0.500209 1_1:-14644504 None:intergenic
GATAAAGATATTTGAAGAAA+GGG 0.501718 1_1:+14646108 Msa0009800:CDS
CATCCATTTCAACAAGAAGT+TGG 0.504444 1_1:-14650769 None:intergenic
ATGAGGTTTAAGAAGAGTAG+AGG 0.505014 1_1:-14644402 None:intergenic
TTCCTTGTTTAGCTCCTTTG+GGG 0.505068 1_1:-14647949 None:intergenic
CGGGTTGAAAAGTGCAGAGA+AGG 0.506860 1_1:-14644469 None:intergenic
GAAATTAACAGCTTCTCAGT+TGG 0.510238 1_1:+14651500 Msa0009800:CDS
GATAGGTTCGGGATTAGGTT+CGG 0.513792 1_1:-14644510 None:intergenic
TACCGAGCTTGCGCAATACA+TGG 0.515301 1_1:+14653039 Msa0009800:CDS
GCTCGTCTTGATGTTTGTAT+GGG 0.515952 1_1:+14652941 Msa0009800:CDS
TTCTTCTCCTGCCTCCAAAA+CGG 0.516546 1_1:-14644769 None:intergenic
ACCCCAGGATTCAATGGGGC+AGG 0.516888 1_1:+14651311 Msa0009800:CDS
ATGAGGAATGGGAAGAGAAG+AGG 0.517503 1_1:-14644371 None:intergenic
TTGTTGAGCTTAATAAGCAC+AGG 0.518276 1_1:+14644857 Msa0009800:CDS
CTACCAGGTCTCGTTAGAGC+TGG 0.519457 1_1:-14650929 None:intergenic
GGAGTGGGGAAGTGTAGTAT+CGG 0.524882 1_1:-14644489 None:intergenic
CCGTGGATCTGCTTTAGGAA+TGG 0.526051 1_1:+14652865 Msa0009800:CDS
AAGGCTATTGCTGGAGAAGC+CGG 0.527024 1_1:+14649307 Msa0009800:intron
GCAATAGCCCGTGGTACCCC+AGG 0.527714 1_1:+14651296 Msa0009800:CDS
TAACCTTGCTAAGAGACACT+TGG 0.529492 1_1:-14654310 None:intergenic
TATTAAAATGAAGAATACAT+AGG 0.530822 1_1:-14654249 None:intergenic
CCTTTGGCAGCTTTCCTCCA+AGG 0.531093 1_1:-14648634 None:intergenic
CATTGAATCCTGGGGTACCA+CGG 0.536347 1_1:-14651304 None:intergenic
GATAAGAATTGCATGGGCTA+AGG 0.537144 1_1:-14654040 None:intergenic
AAGAATTGCATGGGCTAAGG+AGG 0.537451 1_1:-14654037 None:intergenic
TAATAGCAGCAATGTTCACC+AGG 0.538384 1_1:-14651455 None:intergenic
TGTACAGTATAAATTCCTAC+AGG 0.539689 1_1:+14653985 Msa0009800:three_prime_UTR
TTTGCTACACAGATATTCAA+AGG 0.539756 1_1:-14654092 None:intergenic
ATTGAATCCTGGGGTACCAC+GGG 0.540112 1_1:-14651303 None:intergenic
ATCTTATGATAAGAATTGCA+TGG 0.542431 1_1:-14654047 None:intergenic
AAATACATCGGAAGCTTGGG+TGG 0.543361 1_1:+14647888 Msa0009800:CDS
TACCATGTATTGCGCAAGCT+CGG 0.544845 1_1:-14653041 None:intergenic
CTTTGGGTGAGAGCGAAAGA+AGG 0.545221 1_1:+14644709 Msa0009800:intron
AATATCTTTATCACAGACTC+AGG 0.545857 1_1:-14646097 None:intergenic
CGTCTTGATGTTTGTATGGG+AGG 0.550296 1_1:+14652944 Msa0009800:CDS
CAGGAACAAGAAGAAGCAGA+AGG 0.551151 1_1:+14653895 Msa0009800:CDS
CATTCCTAAAGCAGATCCAC+GGG 0.552648 1_1:-14652864 None:intergenic
GTTGCAAGAGTTGAAACAGC+GGG 0.557627 1_1:+14647396 Msa0009800:intron
ACGCGCGGGTGGAGGCGCGT+GGG 0.560316 1_1:-14644434 None:intergenic
TCAGGGGATTCTTCTGACTG+GGG 0.564763 1_1:+14649049 Msa0009800:intron
ATATCTACATTATCGGCTGT+AGG 0.564889 1_1:-14651269 None:intergenic
GAGTGGGGAAGTGTAGTATC+GGG 0.566611 1_1:-14644488 None:intergenic
GGGTTGAAAAGTGCAGAGAA+GGG 0.566719 1_1:-14644468 None:intergenic
GGAACAAGAAGAAGCAGAAG+GGG 0.569059 1_1:+14653897 Msa0009800:CDS
AGGAACAAGAAGAAGCAGAA+GGG 0.570827 1_1:+14653896 Msa0009800:CDS
TTTACCATAACCACGTGCAA+CGG 0.572472 1_1:-14647472 None:intergenic
CTGTTTCCTAGTTGATCCAA+CGG 0.575192 1_1:-14650717 None:intergenic
GGATGGGTTTGAGCAGAATG+AGG 0.575670 1_1:+14650787 Msa0009800:CDS
AACCTTGCTAAGAGACACTT+GGG 0.575927 1_1:-14654309 None:intergenic
CGCGTGGGATTGAAGTGATG+AGG 0.576028 1_1:-14644419 None:intergenic
ACCAAGGAGGGAATTCCAGA+AGG 0.577989 1_1:-14646229 None:intergenic
GAGGTTTAAGAAGAGTAGAG+GGG 0.578192 1_1:-14644400 None:intergenic
GACCCAAGTGTCTCTTAGCA+AGG 0.579015 1_1:+14654307 Msa0009800:three_prime_UTR
TCTTATGATAAGAATTGCAT+GGG 0.579510 1_1:-14654046 None:intergenic
AGCGAAAGAAGGATTGAAGA+GGG 0.579753 1_1:+14644720 Msa0009800:CDS
TTACTTCTCCCGTATCGGGA+AGG 0.581959 1_1:+14653856 Msa0009800:CDS
AGGGGAGTGAAGGGAACGCG+CGG 0.583037 1_1:-14644449 None:intergenic
TTGAAAGTGTGATGAAGAGA+AGG 0.585012 1_1:+14644630 Msa0009800:CDS
TGAGGCCGATGCGAATCGGT+TGG 0.585106 1_1:+14644810 Msa0009800:CDS
GGGGAGTGAAGGGAACGCGC+GGG 0.588088 1_1:-14644448 None:intergenic
AAAACATGAATTACCAAGGA+GGG 0.590298 1_1:-14646241 None:intergenic
GAATACTACAGCACTTGCTG+AGG 0.594415 1_1:+14654149 Msa0009800:three_prime_UTR
GACAGAGCTGTGGACAGTAG+AGG 0.595203 1_1:+14646130 Msa0009800:CDS
TTCTAGGTTAGGAGAATCGT+CGG 0.595504 1_1:-14644534 None:intergenic
CCTTGGAGGAAAGCTGCCAA+AGG 0.602817 1_1:+14648634 Msa0009800:CDS
TGCAGAATATCTTCCTGATG+AGG 0.603402 1_1:+14646195 Msa0009800:CDS
CCATTCCTAAAGCAGATCCA+CGG 0.603684 1_1:-14652865 None:intergenic
AGCATCCAACCGATTCGCAT+CGG 0.603784 1_1:-14644815 None:intergenic
TCGGGATTAGGTTCGGAGTG+GGG 0.606691 1_1:-14644503 None:intergenic
TATTAAGGGCAACAATTGCA+TGG 0.607650 1_1:-14652802 None:intergenic
AGAATATCTTCGAGCACTAG+TGG 0.608927 1_1:+14646159 Msa0009800:CDS
GGTGCAATGTCTTCTTGGTG+TGG 0.614778 1_1:-14650748 None:intergenic
ATTGTTGCCCTTAATACCGA+CGG 0.614887 1_1:+14652809 Msa0009800:CDS
TGATGCAAAGCAAGAACTTG+AGG 0.615992 1_1:+14648571 Msa0009800:CDS
GCTGCTTCTCAGATATTCCA+GGG 0.618273 1_1:-14647450 None:intergenic
AAGTTCATCTTATACCCCAA+AGG 0.619333 1_1:+14647935 Msa0009800:CDS
GAGCGAAAGAAGGATTGAAG+AGG 0.620742 1_1:+14644719 Msa0009800:intron
CGGTGCACATCCAATTCACA+AGG 0.623940 1_1:+14652829 Msa0009800:CDS
GATCCAGCTCTAACGAGACC+TGG 0.626768 1_1:+14650926 Msa0009800:CDS
CCAGACCAATCCAACAGCTA+CGG 0.628119 1_1:-14647742 None:intergenic
CATTGCTGCTATTAAAGCTG+CGG 0.632069 1_1:+14651464 Msa0009800:CDS
TACCCCAAAGGAGCTAAACA+AGG 0.634360 1_1:+14647947 Msa0009800:CDS
ACATGTCGATCAAATCTACC+AGG 0.635247 1_1:-14650944 None:intergenic
TATTACTGTACTAATTATAG+GGG 0.638093 1_1:+14653956 Msa0009800:three_prime_UTR
GGTTGAAAAGTGCAGAGAAG+GGG 0.641080 1_1:-14644467 None:intergenic
AATACATCGGAAGCTTGGGT+GGG 0.641750 1_1:+14647889 Msa0009800:CDS
TGAAGAAAGGGACAGAGCTG+TGG 0.642216 1_1:+14646120 Msa0009800:CDS
TCATCAATGAAAATAATGCA+AGG 0.645297 1_1:-14650686 None:intergenic
TGGATCAACTAGGAAACAGT+GGG 0.648027 1_1:+14650721 Msa0009800:CDS
TGAGAAGCAGCCGTTGCACG+TGG 0.648811 1_1:+14647462 Msa0009800:CDS
AGAATTGCATGGGCTAAGGA+GGG 0.648945 1_1:-14654036 None:intergenic
GTGAATTGGATGTGCACCGT+CGG 0.649686 1_1:-14652825 None:intergenic
AATACTACAGCACTTGCTGA+GGG 0.653077 1_1:+14654150 Msa0009800:three_prime_UTR
ACCTGCCCCATTGAATCCTG+GGG 0.654030 1_1:-14651312 None:intergenic
CAAATCCAGATGTACGTGGT+CGG 0.656095 1_1:+14651213 Msa0009800:CDS
GATATTAAAGCAATAGCCCG+TGG 0.657393 1_1:+14651287 Msa0009800:CDS
AATCCTGCTAACGATGACAA+AGG 0.657812 1_1:+14654116 Msa0009800:three_prime_UTR
TTGGATCAACTAGGAAACAG+TGG 0.663653 1_1:+14650720 Msa0009800:CDS
TGCAAAGCAAGAACTTGAGG+AGG 0.665232 1_1:+14648574 Msa0009800:CDS
TCAACTAGGAAACAGTGGGA+GGG 0.665391 1_1:+14650725 Msa0009800:CDS
ATCAACTAGGAAACAGTGGG+AGG 0.670980 1_1:+14650724 Msa0009800:CDS
GTTCGGGATTAGGTTCGGAG+TGG 0.678284 1_1:-14644505 None:intergenic
TTGATGCCGTTGGATCAACT+AGG 0.681667 1_1:+14650711 Msa0009800:CDS
CTTACTGCTTATCATGAGAG+CGG 0.684706 1_1:+14652779 Msa0009800:CDS
ATTGGCGAAGTTGATTACTG+AGG 0.692137 1_1:+14644792 Msa0009800:CDS
GTACCAAATCCAGATGTACG+TGG 0.724171 1_1:+14651209 Msa0009800:CDS
AGTTGCAAGAGTTGAAACAG+CGG 0.728453 1_1:+14647395 Msa0009800:intron
AAGGCAACAATCATGCCCCG+TGG 0.731484 1_1:+14652848 Msa0009800:CDS
ATTCCTAAAGCAGATCCACG+GGG 0.770989 1_1:-14652863 None:intergenic
TGGTACCCCAGGATTCAATG+GGG 0.791131 1_1:+14651307 Msa0009800:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATCAAAAAAATTTGTATA+AGG - chr1_1:14647125-14647144 None:intergenic 10.0%
!! AATTATGATTATATAATACA+TGG - chr1_1:14648485-14648504 None:intergenic 10.0%
!! TTAAATAAAGTTTAATATGT+TGG + chr1_1:14650445-14650464 Msa0009800:intron 10.0%
!!! ATTTTTAGTATTTTAATGTT+AGG - chr1_1:14651851-14651870 None:intergenic 10.0%
!! ACATTATATAAAAAAAAGAT+TGG - chr1_1:14651939-14651958 None:intergenic 10.0%
!!! TATATTTTTTGTTATATTGT+TGG - chr1_1:14652127-14652146 None:intergenic 10.0%
!!! CAAATATTTTATCAATTTTT+TGG + chr1_1:14652643-14652662 Msa0009800:intron 10.0%
!!! TTTTTAGACAAATATTTTAT+TGG + chr1_1:14654201-14654220 Msa0009800:three_prime_UTR 10.0%
!!! TATTATTCATAAGTTTGTTA+AGG + chr1_1:14645106-14645125 Msa0009800:intron 15.0%
!! AGACAAAAAAAAAAAAAGAT+TGG + chr1_1:14645328-14645347 Msa0009800:intron 15.0%
!!! TTGTTGTTATAAATGTTTTT+AGG + chr1_1:14645490-14645509 Msa0009800:intron 15.0%
!! TATAGGAAAAGATAAAATAA+AGG + chr1_1:14645718-14645737 Msa0009800:intron 15.0%
!! CATGTAAAATAGTTTATTAA+AGG - chr1_1:14645913-14645932 None:intergenic 15.0%
!!! ATGAACATAATAGTTATTTT+CGG + chr1_1:14646001-14646020 Msa0009800:intron 15.0%
!! AAAAAATTAGAAAAAAGTCA+AGG - chr1_1:14646607-14646626 None:intergenic 15.0%
!! AATAATCAAACAATAGAATT+GGG - chr1_1:14647625-14647644 None:intergenic 15.0%
!! AAATGTAGTAAGTATTATAT+TGG - chr1_1:14648286-14648305 None:intergenic 15.0%
!!! AATAATTCATTTGATAGTAT+TGG - chr1_1:14648392-14648411 None:intergenic 15.0%
!! ATAATAATAATGAAGTTCAA+TGG - chr1_1:14649256-14649275 None:intergenic 15.0%
!! AAGGAAAATTAAAAAAACAT+AGG + chr1_1:14651079-14651098 Msa0009800:intron 15.0%
!! TATATTATATACACATTAAC+CGG - chr1_1:14651149-14651168 None:intergenic 15.0%
!! TAATGTGTATATAATATAGA+TGG + chr1_1:14651151-14651170 Msa0009800:intron 15.0%
!! TAACATTTGAAAATTATGAA+CGG + chr1_1:14651991-14652010 Msa0009800:intron 15.0%
!!! TTACACTTTTTAAATGATAA+AGG + chr1_1:14652259-14652278 Msa0009800:intron 15.0%
!! TTATTTGTATTGAAAATTGA+GGG + chr1_1:14652390-14652409 Msa0009800:intron 15.0%
!! TATAGATGAAAATAGAAAAT+TGG + chr1_1:14652475-14652494 Msa0009800:intron 15.0%
!! AATAAAATAGACACAAAAAA+TGG - chr1_1:14652669-14652688 None:intergenic 15.0%
!!! TCTATTTTATTTAGCATAAT+TGG + chr1_1:14652678-14652697 Msa0009800:intron 15.0%
!! CATAAATTCATTGAAAAAAT+TGG + chr1_1:14653674-14653693 Msa0009800:intron 15.0%
!! TATTAAAATGAAGAATACAT+AGG - chr1_1:14654252-14654271 None:intergenic 15.0%
!!! TTTACATTTTGTATTGTGTT+TGG + chr1_1:14644949-14644968 Msa0009800:intron 20.0%
!! AGTATATGAAAAAACAACTT+AGG + chr1_1:14645130-14645149 Msa0009800:intron 20.0%
!! CAAAAAAAAAAAAAGATTGG+AGG + chr1_1:14645331-14645350 Msa0009800:intron 20.0%
!!! AATGTATTAGCTATTTCTAT+AGG + chr1_1:14645701-14645720 Msa0009800:intron 20.0%
!! AATGAAAAAACATATGATAG+TGG - chr1_1:14646064-14646083 None:intergenic 20.0%
!! TGATAAAGATATTTGAAGAA+AGG + chr1_1:14646107-14646126 Msa0009800:CDS 20.0%
!! GATAAAGATATTTGAAGAAA+GGG + chr1_1:14646108-14646127 Msa0009800:CDS 20.0%
!! TTAAAGCAATTTGATCAAAA+CGG - chr1_1:14646386-14646405 None:intergenic 20.0%
!! CGAAAAATTCATTTAAACAA+AGG + chr1_1:14646538-14646557 Msa0009800:intron 20.0%
!!! AAAATTATCATCTAAGATGA+CGG + chr1_1:14646734-14646753 Msa0009800:intron 20.0%
!!! ATTCAAACATGATTTAAGTT+GGG + chr1_1:14646772-14646791 Msa0009800:intron 20.0%
!!! AGCAAATCTTTTTTCTTATT+AGG - chr1_1:14647096-14647115 None:intergenic 20.0%
!! TAATAAGAAAAAAGATTTGC+TGG + chr1_1:14647095-14647114 Msa0009800:intron 20.0%
!! ATTTCAGTTCATAATTTACT+TGG + chr1_1:14647334-14647353 Msa0009800:intron 20.0%
!! GAATAATCAAACAATAGAAT+TGG - chr1_1:14647626-14647645 None:intergenic 20.0%
!! TCTACTACAATATTACAATA+TGG + chr1_1:14648028-14648047 Msa0009800:intron 20.0%
!!! GCATATAGATTATTTTCTTT+TGG + chr1_1:14648050-14648069 Msa0009800:intron 20.0%
!! AATACATGATTGAATAGTTT+AGG + chr1_1:14648075-14648094 Msa0009800:intron 20.0%
!!! TAAATTTAGCTGGATTTTTT+AGG - chr1_1:14648610-14648629 None:intergenic 20.0%
!!! AATATTTTGTTTATGAAGTC+AGG + chr1_1:14649009-14649028 Msa0009800:intron 20.0%
!! TCCAAAAATTATTCAAATAG+AGG - chr1_1:14649569-14649588 None:intergenic 20.0%
!! CTAAGAGAAATAAGAAATTA+TGG - chr1_1:14650296-14650315 None:intergenic 20.0%
!!! TTTTCTTCTTTATCTTTTGT+AGG + chr1_1:14650661-14650680 Msa0009800:intron 20.0%
!!! ATTTATCATTTTTATGCTGT+AGG + chr1_1:14650862-14650881 Msa0009800:intron 20.0%
!!! TTTATCATTTTTATGCTGTA+GGG + chr1_1:14650863-14650882 Msa0009800:intron 20.0%
!! TCTTCGTAAATTCATTTATA+GGG - chr1_1:14650992-14651011 None:intergenic 20.0%
!! ACAAATTAAACAAGAGAAAA+AGG + chr1_1:14651060-14651079 Msa0009800:intron 20.0%
!! ATATTATATACACATTAACC+GGG - chr1_1:14651148-14651167 None:intergenic 20.0%
!! TGCTTTAATATCTACATTAT+CGG - chr1_1:14651279-14651298 None:intergenic 20.0%
!!! ACTATTTCATTGATAGTATA+TGG - chr1_1:14651905-14651924 None:intergenic 20.0%
!!! GTTCATAATTTTCAAATGTT+AGG - chr1_1:14651992-14652011 None:intergenic 20.0%
!! ATCATTGAAATAGATAATCA+TGG - chr1_1:14652103-14652122 None:intergenic 20.0%
!! ATTGTAGAAAAAGTTGTTTA+AGG + chr1_1:14652186-14652205 Msa0009800:intron 20.0%
!! TTGTAGAAAAAGTTGTTTAA+GGG + chr1_1:14652187-14652206 Msa0009800:intron 20.0%
!! GTTATTTGTATTGAAAATTG+AGG + chr1_1:14652389-14652408 Msa0009800:intron 20.0%
!! CTAACAATTGAAATTATGTT+TGG + chr1_1:14653436-14653455 Msa0009800:intron 20.0%
!! TGTTTGATATATATACTGTT+TGG + chr1_1:14653715-14653734 Msa0009800:intron 20.0%
!! GCTAAAAAAAATGACAAAAA+TGG - chr1_1:14653762-14653781 None:intergenic 20.0%
!! TGTATTACTGTACTAATTAT+AGG + chr1_1:14653954-14653973 Msa0009800:three_prime_UTR 20.0%
!! GTATTACTGTACTAATTATA+GGG + chr1_1:14653955-14653974 Msa0009800:three_prime_UTR 20.0%
!! TATTACTGTACTAATTATAG+GGG + chr1_1:14653956-14653975 Msa0009800:three_prime_UTR 20.0%
!! TCTTATCATAAGATGATTAT+AGG + chr1_1:14654056-14654075 Msa0009800:three_prime_UTR 20.0%
!! TCGTTTTCAGTTGAATTTAA+CGG - chr1_1:14644560-14644579 None:intergenic 25.0%
!!! TGTCTTTTTGATTGTAATGT+AGG + chr1_1:14644908-14644927 Msa0009800:intron 25.0%
! TAATGTAGGAATAAGTTAGA+AGG + chr1_1:14644922-14644941 Msa0009800:intron 25.0%
! TTGTATTGTGTTTGGAAAAT+TGG + chr1_1:14644957-14644976 Msa0009800:intron 25.0%
! TGTATTGTGTTTGGAAAATT+GGG + chr1_1:14644958-14644977 Msa0009800:intron 25.0%
! AAAATAAGCTCAATCTAAAC+GGG - chr1_1:14645057-14645076 None:intergenic 25.0%
! CAAAATAAGCTCAATCTAAA+CGG - chr1_1:14645058-14645077 None:intergenic 25.0%
!! TGCTTGGGAAAATTTAAAAT+TGG + chr1_1:14645367-14645386 Msa0009800:intron 25.0%
! AAATTAGAGAAAGAACACTT+AGG + chr1_1:14645396-14645415 Msa0009800:intron 25.0%
! AACACTTAGGTTTACTATTT+GGG + chr1_1:14645409-14645428 Msa0009800:intron 25.0%
! TAGCTTCTGTTATGAAAATT+AGG + chr1_1:14645520-14645539 Msa0009800:intron 25.0%
! AGCTTCTGTTATGAAAATTA+GGG + chr1_1:14645521-14645540 Msa0009800:intron 25.0%
! TAGTTTATTAAAGGTCTGTT+AGG - chr1_1:14645904-14645923 None:intergenic 25.0%
! AAGAAAAACATGAATTACCA+AGG - chr1_1:14646248-14646267 None:intergenic 25.0%
! TTAACAAATGTCTGTCTATT+AGG + chr1_1:14646402-14646421 Msa0009800:intron 25.0%
! TAAGGTAAAAACTAGAGTAA+GGG - chr1_1:14646450-14646469 None:intergenic 25.0%
! TTAAGGTAAAAACTAGAGTA+AGG - chr1_1:14646451-14646470 None:intergenic 25.0%
! TTCATTTAAACAAAGGAATC+TGG + chr1_1:14646545-14646564 Msa0009800:intron 25.0%
! TCATTTAAACAAAGGAATCT+GGG + chr1_1:14646546-14646565 Msa0009800:intron 25.0%
!!! CTAATTTTTTAGCCGAATTT+CGG + chr1_1:14646617-14646636 Msa0009800:intron 25.0%
!!! AGTAAAAGAAAGTCATTTTG+AGG - chr1_1:14646651-14646670 None:intergenic 25.0%
! CATTCAAACATGATTTAAGT+TGG + chr1_1:14646771-14646790 Msa0009800:intron 25.0%
!!! TTCAAACATGATTTAAGTTG+GGG + chr1_1:14646773-14646792 Msa0009800:intron 25.0%
!!! AGCTCAATTTTAGTAAAATG+AGG + chr1_1:14646945-14646964 Msa0009800:intron 25.0%
! AAGAAAGTTCATGTTAACAA+AGG - chr1_1:14647286-14647305 None:intergenic 25.0%
!!! CTTTTTTTTTATGCTTTGAG+TGG + chr1_1:14647510-14647529 Msa0009800:intron 25.0%
! TATACGTAAGAGTAGATTAA+CGG - chr1_1:14647996-14648015 None:intergenic 25.0%
!!! ACACGTGAACATTTATTTTA+CGG + chr1_1:14648154-14648173 Msa0009800:intron 25.0%
! ATATACTTCAAGAACTAATG+GGG - chr1_1:14648369-14648388 None:intergenic 25.0%
! GATATACTTCAAGAACTAAT+GGG - chr1_1:14648370-14648389 None:intergenic 25.0%
!! AAAGTTTTTACATTCTGCAA+GGG - chr1_1:14648530-14648549 None:intergenic 25.0%
!! AAAAGTTTTTACATTCTGCA+AGG - chr1_1:14648531-14648550 None:intergenic 25.0%
!! GCAGAATGTAAAAACTTTTA+AGG + chr1_1:14648532-14648551 Msa0009800:intron 25.0%
!!! AAAACTTTTAAGGATGTGAA+AGG + chr1_1:14648542-14648561 Msa0009800:CDS 25.0%
!! CAATAACTTTTATAGACCTT+TGG - chr1_1:14648653-14648672 None:intergenic 25.0%
! CAAAGGTCTATAAAAGTTAT+TGG + chr1_1:14648651-14648670 Msa0009800:intron 25.0%
!! ATTCTATAGTCCTATACTTT+TGG + chr1_1:14649113-14649132 Msa0009800:intron 25.0%
!! TTCTATAGTCCTATACTTTT+GGG + chr1_1:14649114-14649133 Msa0009800:intron 25.0%
!! GCCTCTATTTGAATAATTTT+TGG + chr1_1:14649565-14649584 Msa0009800:intron 25.0%
! TTCACAAACTTGTAGTTATT+TGG - chr1_1:14649639-14649658 None:intergenic 25.0%
! AATTTAACAAGCAAAAGTCA+AGG + chr1_1:14649712-14649731 Msa0009800:intron 25.0%
! AAAAAAAAACACCCTTAATG+CGG + chr1_1:14649891-14649910 Msa0009800:intron 25.0%
! CAGGGAAAAAAATAAAAACA+AGG + chr1_1:14649937-14649956 Msa0009800:intron 25.0%
!! TCTATTTTACGGGTATTTTT+GGG + chr1_1:14650166-14650185 Msa0009800:intron 25.0%
! ATTGTAATGTTCAAATTGTC+TGG - chr1_1:14650242-14650261 None:intergenic 25.0%
!! TAAATTTGATCTGTGTCTTT+TGG + chr1_1:14650382-14650401 Msa0009800:intron 25.0%
! ATAAAGTTTAATATGTTGGC+TGG + chr1_1:14650449-14650468 Msa0009800:intron 25.0%
! TCATCAATGAAAATAATGCA+AGG - chr1_1:14650689-14650708 None:intergenic 25.0%
! CTTCGTAAATTCATTTATAG+GGG - chr1_1:14650991-14651010 None:intergenic 25.0%
! CTCTTCGTAAATTCATTTAT+AGG - chr1_1:14650993-14651012 None:intergenic 25.0%
!!! AATTTGTTAATTCTTGCGAT+AGG - chr1_1:14651047-14651066 None:intergenic 25.0%
!! TTCATTGATAGTATATGGAA+TGG - chr1_1:14651900-14651919 None:intergenic 25.0%
!! ATAGATAATCATGGTTAGTT+TGG - chr1_1:14652094-14652113 None:intergenic 25.0%
! TCTACAATAAAGATTGTTGT+TGG - chr1_1:14652174-14652193 None:intergenic 25.0%
!! AAGTTGTTTAAGGGTATAAT+TGG + chr1_1:14652196-14652215 Msa0009800:intron 25.0%
!! AGTTGTTTAAGGGTATAATT+GGG + chr1_1:14652197-14652216 Msa0009800:intron 25.0%
!!! TTGAAAATTGAGGGTATTTT+TGG + chr1_1:14652399-14652418 Msa0009800:intron 25.0%
!! TTAGAAATTACTCTAGGAAA+TGG - chr1_1:14652604-14652623 None:intergenic 25.0%
! ATGCTCAGTTATGTTATTAA+TGG + chr1_1:14652741-14652760 Msa0009800:intron 25.0%
! ATGAATTTATGTACCTCAAA+AGG - chr1_1:14653665-14653684 None:intergenic 25.0%
! ATCAAACATTGCATAATTCA+GGG - chr1_1:14653703-14653722 None:intergenic 25.0%
! TATCAAACATTGCATAATTC+AGG - chr1_1:14653704-14653723 None:intergenic 25.0%
!!! TCATTTTTTTTAGCATGAGA+AGG + chr1_1:14653768-14653787 Msa0009800:intron 25.0%
! GATTAAAAAAAACTACCTGT+AGG - chr1_1:14654003-14654022 None:intergenic 25.0%
! TCTTATGATAAGAATTGCAT+GGG - chr1_1:14654049-14654068 None:intergenic 25.0%
! ATCTTATGATAAGAATTGCA+TGG - chr1_1:14654050-14654069 None:intergenic 25.0%
GTATTGTGTTTGGAAAATTG+GGG + chr1_1:14644959-14644978 Msa0009800:intron 30.0%
!! TAGTTTGGTTTGAAGATTGT+AGG + chr1_1:14644984-14645003 Msa0009800:intron 30.0%
TCGAGTGATTAAAGAACTTT+AGG + chr1_1:14645030-14645049 Msa0009800:intron 30.0%
CGAGTGATTAAAGAACTTTA+GGG + chr1_1:14645031-14645050 Msa0009800:intron 30.0%
CAAAATAAGCTCAATCCAAA+CGG + chr1_1:14645232-14645251 Msa0009800:intron 30.0%
AAAATAAGCTCAATCCAAAC+GGG + chr1_1:14645233-14645252 Msa0009800:intron 30.0%
CCAAAACAAATTCTCTCAAA+CGG - chr1_1:14645277-14645296 None:intergenic 30.0%
!!! TTTTTTTTGTCTTGCCTTAG+TGG - chr1_1:14645320-14645339 None:intergenic 30.0%
GAACACTTAGGTTTACTATT+TGG + chr1_1:14645408-14645427 Msa0009800:intron 30.0%
AGCAGTACTATACTAATTCT+AGG - chr1_1:14645441-14645460 None:intergenic 30.0%
!! GGTTCTAAGATTAAGAAAAG+AGG + chr1_1:14645542-14645561 Msa0009800:intron 30.0%
ATAAGTTATTCACCCAAACA+GGG - chr1_1:14645642-14645661 None:intergenic 30.0%
AATAAGTTATTCACCCAAAC+AGG - chr1_1:14645643-14645662 None:intergenic 30.0%
GAACTTAAGAAAACAGCTTA+TGG - chr1_1:14645832-14645851 None:intergenic 30.0%
!!! TTTTCTAAGATAGTGACACA+TGG - chr1_1:14645948-14645967 None:intergenic 30.0%
!! ACATAATAGTTATTTTCGGC+TGG + chr1_1:14646005-14646024 Msa0009800:intron 30.0%
!! CATAATAGTTATTTTCGGCT+GGG + chr1_1:14646006-14646025 Msa0009800:intron 30.0%
AATATCTTTATCACAGACTC+AGG - chr1_1:14646100-14646119 None:intergenic 30.0%
AAAACATGAATTACCAAGGA+GGG - chr1_1:14646244-14646263 None:intergenic 30.0%
AAAAACATGAATTACCAAGG+AGG - chr1_1:14646245-14646264 None:intergenic 30.0%
! TGTAGCTATTTGTTGATACT+AGG + chr1_1:14646360-14646379 Msa0009800:intron 30.0%
! TTTTTACCTTAAGCTGCTTA+TGG + chr1_1:14646459-14646478 Msa0009800:intron 30.0%
!!! TTTTGGGATAGTTGTTCATT+GGG + chr1_1:14646482-14646501 Msa0009800:intron 30.0%
TTAGAAAAAAGTCAAGGATC+AGG - chr1_1:14646601-14646620 None:intergenic 30.0%
!! AAAAGAAAGTCATTTTGAGG+CGG - chr1_1:14646648-14646667 None:intergenic 30.0%
AACACAACCATAATGCTAAT+AGG + chr1_1:14646702-14646721 Msa0009800:intron 30.0%
TGTGAAACCTATTAGCATTA+TGG - chr1_1:14646712-14646731 None:intergenic 30.0%
!! TCAAACATGATTTAAGTTGG+GGG + chr1_1:14646774-14646793 Msa0009800:intron 30.0%
! AAACAGCATTACAACTTTTG+TGG - chr1_1:14646886-14646905 None:intergenic 30.0%
ACAAAAGTTGTAATGCTGTT+TGG + chr1_1:14646885-14646904 Msa0009800:intron 30.0%
!!! TAAGCTCTTGTTGGTTTTTA+GGG - chr1_1:14646925-14646944 None:intergenic 30.0%
!!! TTAAGCTCTTGTTGGTTTTT+AGG - chr1_1:14646926-14646945 None:intergenic 30.0%
AAATGAGGATACAAAGTCAA+TGG + chr1_1:14646960-14646979 Msa0009800:intron 30.0%
TCAATGGTAGACATACAATA+GGG + chr1_1:14646976-14646995 Msa0009800:intron 30.0%
TGAGACACACATATAAGTAT+AGG - chr1_1:14647540-14647559 None:intergenic 30.0%
!!! ATGAAGCTGCTTCATTTTTT+AGG + chr1_1:14647656-14647675 Msa0009800:intron 30.0%
TTGAGAAAAAGAGAGAGATA+GGG - chr1_1:14647784-14647803 None:intergenic 30.0%
ATTGAGAAAAAGAGAGAGAT+AGG - chr1_1:14647785-14647804 None:intergenic 30.0%
GAATACAAGTATGCATCAAA+GGG - chr1_1:14647825-14647844 None:intergenic 30.0%
ATACGTAAGAGTAGATTAAC+GGG - chr1_1:14647995-14648014 None:intergenic 30.0%
TGTGTATTAGCAAGAAATCT+GGG + chr1_1:14648098-14648117 Msa0009800:intron 30.0%
!!! CACGTGAACATTTATTTTAC+GGG + chr1_1:14648155-14648174 Msa0009800:intron 30.0%
TATACTTCAAGAACTAATGG+GGG - chr1_1:14648368-14648387 None:intergenic 30.0%
GGATATACTTCAAGAACTAA+TGG - chr1_1:14648371-14648390 None:intergenic 30.0%
AGCTTCCATATGACAAATAA+GGG - chr1_1:14648425-14648444 None:intergenic 30.0%
CTCTTGCATATACGATATAT+CGG + chr1_1:14648443-14648462 Msa0009800:intron 30.0%
! AAGTTTTTACATTCTGCAAG+GGG - chr1_1:14648529-14648548 None:intergenic 30.0%
CTAACAAACATGTAAAGCTT+TGG + chr1_1:14648838-14648857 Msa0009800:intron 30.0%
! TTTTATCTAGGCACGTATAA+AGG - chr1_1:14648948-14648967 None:intergenic 30.0%
CTATAGAATTTAACTGACCT+TGG - chr1_1:14649102-14649121 None:intergenic 30.0%
! CAAAAACTTCCCAAAAGTAT+AGG - chr1_1:14649126-14649145 None:intergenic 30.0%
!! CTATACTTTTGGGAAGTTTT+TGG + chr1_1:14649124-14649143 Msa0009800:intron 30.0%
!! TTTTTGGAAGGACTTAAATC+CGG + chr1_1:14649140-14649159 Msa0009800:intron 30.0%
!! ATCTGATTGTTTGCTATATC+TGG + chr1_1:14649277-14649296 Msa0009800:intron 30.0%
!! TCTGATTGTTTGCTATATCT+GGG + chr1_1:14649278-14649297 Msa0009800:intron 30.0%
TGCTAGATTATGTTAAGAAG+TGG + chr1_1:14649385-14649404 Msa0009800:intron 30.0%
GCTAGATTATGTTAAGAAGT+GGG + chr1_1:14649386-14649405 Msa0009800:intron 30.0%
! AAGGGTATATTCTGTTATTC+TGG + chr1_1:14649426-14649445 Msa0009800:intron 30.0%
!!! TGACAACTTGTCACTTTTTA+TGG - chr1_1:14649676-14649695 None:intergenic 30.0%
! TAGTTTTTGCAGAATAGAGA+AGG + chr1_1:14650089-14650108 Msa0009800:intron 30.0%
! CTCTATTTTACGGGTATTTT+TGG + chr1_1:14650165-14650184 Msa0009800:intron 30.0%
! TCTTATTTCTCTTAGATCTG+TGG + chr1_1:14650301-14650320 Msa0009800:intron 30.0%
! AAAGCAACAAACCTTCTTTT+TGG - chr1_1:14650559-14650578 None:intergenic 30.0%
! GTGTGTTGGTAAACTAAAAT+AGG - chr1_1:14650608-14650627 None:intergenic 30.0%
!!! ATTTTAGTTTACCAACACAC+AGG + chr1_1:14650608-14650627 Msa0009800:intron 30.0%
AACTTCTTGTTGAAATGGAT+GGG + chr1_1:14650771-14650790 Msa0009800:CDS 30.0%
GCTGTAGGGAATAATATTAA+TGG + chr1_1:14650877-14650896 Msa0009800:intron 30.0%
GATTGAAATAGAAACTGGAA+AGG - chr1_1:14651113-14651132 None:intergenic 30.0%
GTAAGATGACTAACAAATTC+TGG + chr1_1:14651173-14651192 Msa0009800:intron 30.0%
! AGTATATGATTCGCATTGAT+TGG - chr1_1:14651376-14651395 None:intergenic 30.0%
TATATCACATACACTAGATC+TGG + chr1_1:14651428-14651447 Msa0009800:intron 30.0%
TGCAAAAGACCGAATAATTA+TGG + chr1_1:14651527-14651546 Msa0009800:CDS 30.0%
GCAAAAGACCGAATAATTAT+GGG + chr1_1:14651528-14651547 Msa0009800:CDS 30.0%
GCGAAAAACAATGTTTGTAT+CGG + chr1_1:14651557-14651576 Msa0009800:CDS 30.0%
AAAAACAATGTTTGTATCGG+AGG + chr1_1:14651560-14651579 Msa0009800:CDS 30.0%
TGTAGGAATATGTATATGTC+AGG + chr1_1:14651599-14651618 Msa0009800:intron 30.0%
AACATAGGTTTACAACTACA+GGG - chr1_1:14651737-14651756 None:intergenic 30.0%
ATGTTAGGCAATAAAAAGAG+TGG - chr1_1:14651977-14651996 None:intergenic 30.0%
! TAAGGGTATAATTGGGATAA+TGG + chr1_1:14652204-14652223 Msa0009800:intron 30.0%
GCAACTAACTATTCATTAGA+TGG - chr1_1:14652505-14652524 None:intergenic 30.0%
!! AGTTGATAGGATAGGTAAAT+TGG + chr1_1:14652546-14652565 Msa0009800:intron 30.0%
ATTGATGTCTCATCATTTGA+GGG - chr1_1:14652902-14652921 None:intergenic 30.0%
TATTGATGTCTCATCATTTG+AGG - chr1_1:14652903-14652922 None:intergenic 30.0%
CACAAATGAACATCAACAAA+AGG - chr1_1:14653156-14653175 None:intergenic 30.0%
AGCAGAAAGTAAGATATATC+TGG - chr1_1:14653211-14653230 None:intergenic 30.0%
!!! GTATTTTAACTCTCTTCACA+AGG + chr1_1:14653292-14653311 Msa0009800:intron 30.0%
AATCGGACCAATTCATATAA+AGG + chr1_1:14653340-14653359 Msa0009800:intron 30.0%
!! TTAGTTGATTTGCTCTTCTA+AGG + chr1_1:14653460-14653479 Msa0009800:intron 30.0%
GACATCAACAATCAAATTCA+TGG + chr1_1:14653482-14653501 Msa0009800:intron 30.0%
! GAATCAAAAGTAACCTTTTG+AGG + chr1_1:14653649-14653668 Msa0009800:intron 30.0%
TGTACAGTATAAATTCCTAC+AGG + chr1_1:14653985-14654004 Msa0009800:three_prime_UTR 30.0%
TTTGCTACACAGATATTCAA+AGG - chr1_1:14654095-14654114 None:intergenic 30.0%
TGAGGTTTAAGAAGAGTAGA+GGG - chr1_1:14644404-14644423 None:intergenic 35.0%
ATGAGGTTTAAGAAGAGTAG+AGG - chr1_1:14644405-14644424 None:intergenic 35.0%
!! GAATTTAACGGTTCTAGGTT+AGG - chr1_1:14644548-14644567 None:intergenic 35.0%
CAGTTGAATTTAACGGTTCT+AGG - chr1_1:14644553-14644572 None:intergenic 35.0%
! TTGAAAGTGTGATGAAGAGA+AGG + chr1_1:14644630-14644649 Msa0009800:CDS 35.0%
CCAATCAAAAACACCACTAT+CGG - chr1_1:14644688-14644707 None:intergenic 35.0%
!! CGATAGTGGTGTTTTTGATT+GGG + chr1_1:14644686-14644705 Msa0009800:intron 35.0%
TTGTTGAGCTTAATAAGCAC+AGG + chr1_1:14644857-14644876 Msa0009800:CDS 35.0%
TGGAAAATTGGGGTTTAGTT+TGG + chr1_1:14644969-14644988 Msa0009800:intron 35.0%
AAATAAGCTCAATCCAAACG+GGG + chr1_1:14645234-14645253 Msa0009800:intron 35.0%
!! CCGTTTGAGAGAATTTGTTT+TGG + chr1_1:14645274-14645293 Msa0009800:intron 35.0%
AAGAAAAGAGGAAGAGAAAC+TGG + chr1_1:14645554-14645573 Msa0009800:intron 35.0%
TCCAAAGATGCAATACACTT+AGG + chr1_1:14645616-14645635 Msa0009800:intron 35.0%
TGGGTTTGTAATTCTTGAGA+TGG + chr1_1:14646025-14646044 Msa0009800:intron 35.0%
! CTTAAGCTGCTTATGGTTTT+GGG + chr1_1:14646466-14646485 Msa0009800:intron 35.0%
!!! GTTTTGGGATAGTTGTTCAT+TGG + chr1_1:14646481-14646500 Msa0009800:intron 35.0%
!! CAAAGGAATCTGGGATTTTT+CGG + chr1_1:14646555-14646574 Msa0009800:intron 35.0%
TTCGGCCAAAATTCTGTAAA+AGG + chr1_1:14646573-14646592 Msa0009800:intron 35.0%
TCGGCCAAAATTCTGTAAAA+GGG + chr1_1:14646574-14646593 Msa0009800:intron 35.0%
! AGGACCCTTTTACAGAATTT+TGG - chr1_1:14646581-14646600 None:intergenic 35.0%
!!! ATTTTTTAGCCGAATTTCGG+AGG + chr1_1:14646620-14646639 Msa0009800:intron 35.0%
TTAGCATTATGGTTGTGTTC+AGG - chr1_1:14646701-14646720 None:intergenic 35.0%
!! TCTAAGATGACGGAGAAATT+AGG + chr1_1:14646744-14646763 Msa0009800:intron 35.0%
!! CTAAGATGACGGAGAAATTA+GGG + chr1_1:14646745-14646764 Msa0009800:intron 35.0%
!! TAAGATGACGGAGAAATTAG+GGG + chr1_1:14646746-14646765 Msa0009800:intron 35.0%
AATTGAGCTTAAGCTCTTGT+TGG - chr1_1:14646934-14646953 None:intergenic 35.0%
GTCAATGGTAGACATACAAT+AGG + chr1_1:14646975-14646994 Msa0009800:intron 35.0%
ATGCATTTGAGAGGAAAGTA+AGG + chr1_1:14647009-14647028 Msa0009800:intron 35.0%
ATAATGACGTTGTTTGACCA+AGG + chr1_1:14647059-14647078 Msa0009800:intron 35.0%
ATTTCTCCGAAATATGCTTC+TGG + chr1_1:14647181-14647200 Msa0009800:intron 35.0%
! TCAGATCCAGAAGCATATTT+CGG - chr1_1:14647190-14647209 None:intergenic 35.0%
!! ATTTTGTTTACCGTAGCTGT+TGG + chr1_1:14647732-14647751 Msa0009800:CDS 35.0%
GGAATACAAGTATGCATCAA+AGG - chr1_1:14647826-14647845 None:intergenic 35.0%
GCTGCACTTCAAAAATACAT+CGG + chr1_1:14647876-14647895 Msa0009800:CDS 35.0%
TCAAAAATACATCGGAAGCT+TGG + chr1_1:14647884-14647903 Msa0009800:CDS 35.0%
CAAAAATACATCGGAAGCTT+GGG + chr1_1:14647885-14647904 Msa0009800:CDS 35.0%
AAGTTCATCTTATACCCCAA+AGG + chr1_1:14647935-14647954 Msa0009800:CDS 35.0%
!!! ATTAACGGGTTAACCTTTTC+TGG - chr1_1:14647981-14648000 None:intergenic 35.0%
GTGTGTATTAGCAAGAAATC+TGG + chr1_1:14648097-14648116 Msa0009800:intron 35.0%
GTCGATGAAATAGTTAGCAA+TGG - chr1_1:14648314-14648333 None:intergenic 35.0%
CCATATGACAAATAAGGGTA+AGG - chr1_1:14648420-14648439 None:intergenic 35.0%
! CCTTACCCTTATTTGTCATA+TGG + chr1_1:14648417-14648436 Msa0009800:intron 35.0%
GAGCTTCCATATGACAAATA+AGG - chr1_1:14648426-14648445 None:intergenic 35.0%
ATCAGTTCCTAAACAGTGAT+TGG - chr1_1:14648774-14648793 None:intergenic 35.0%
! TCATGCTTGTTAGTGCAATT+TGG + chr1_1:14648982-14649001 Msa0009800:intron 35.0%
! CTAAGATGATCCTCTTTTCA+GGG + chr1_1:14649032-14649051 Msa0009800:intron 35.0%
! TAAGATGATCCTCTTTTCAG+GGG + chr1_1:14649033-14649052 Msa0009800:intron 35.0%
!! ACTTTTGGGAAGTTTTTGGA+AGG + chr1_1:14649128-14649147 Msa0009800:intron 35.0%
ACGATAGAAAAATGGAACAC+CGG - chr1_1:14649329-14649348 None:intergenic 35.0%
GCACATGATATGCTAGAAAA+GGG + chr1_1:14649408-14649427 Msa0009800:intron 35.0%
GCTCTATTATCATGAAACAG+AGG + chr1_1:14649863-14649882 Msa0009800:intron 35.0%
CTATTATCATGAAACAGAGG+AGG + chr1_1:14649866-14649885 Msa0009800:intron 35.0%
TTTGCAGAATAGAGAAGGAA+AGG + chr1_1:14650094-14650113 Msa0009800:intron 35.0%
TTGCAGAATAGAGAAGGAAA+GGG + chr1_1:14650095-14650114 Msa0009800:intron 35.0%
CCGTAAAATAGAGTCTGTTA+GGG - chr1_1:14650158-14650177 None:intergenic 35.0%
! CCCTAACAGACTCTATTTTA+CGG + chr1_1:14650155-14650174 Msa0009800:intron 35.0%
! CCTAACAGACTCTATTTTAC+GGG + chr1_1:14650156-14650175 Msa0009800:intron 35.0%
ACAACAGATGTACTACAATG+CGG - chr1_1:14650202-14650221 None:intergenic 35.0%
! GTTTAATATGTTGGCTGGTA+TGG + chr1_1:14650454-14650473 Msa0009800:intron 35.0%
! TCATATTTCTGTTCATGCTC+AGG + chr1_1:14650487-14650506 Msa0009800:intron 35.0%
ATTTCAAGCAGCCAAAAAGA+AGG + chr1_1:14650545-14650564 Msa0009800:CDS 35.0%
ATTGATGAAATTGATGCCGT+TGG + chr1_1:14650701-14650720 Msa0009800:CDS 35.0%
CATCCATTTCAACAAGAAGT+TGG - chr1_1:14650772-14650791 None:intergenic 35.0%
CAACTTCTTGTTGAAATGGA+TGG + chr1_1:14650770-14650789 Msa0009800:CDS 35.0%
TCCAGTTTCTATTTCAATCC+AGG + chr1_1:14651114-14651133 Msa0009800:intron 35.0%
ACCTGGATTGAAATAGAAAC+TGG - chr1_1:14651118-14651137 None:intergenic 35.0%
! ATATCTACATTATCGGCTGT+AGG - chr1_1:14651272-14651291 None:intergenic 35.0%
!! ATATGATTCGCATTGATTGG+AGG - chr1_1:14651373-14651392 None:intergenic 35.0%
ATTACAGAGAACATCAGTCA+GGG - chr1_1:14651408-14651427 None:intergenic 35.0%
AATTACAGAGAACATCAGTC+AGG - chr1_1:14651409-14651428 None:intergenic 35.0%
GAAATTAACAGCTTCTCAGT+TGG + chr1_1:14651500-14651519 Msa0009800:CDS 35.0%
GCTCTGTACCCATAATTATT+CGG - chr1_1:14651539-14651558 None:intergenic 35.0%
! GAGTCAAAAAAGGTATGTGT+AGG + chr1_1:14651582-14651601 Msa0009800:intron 35.0%
!! AGTTTGCTACTTAAGAACTG+TGG + chr1_1:14651628-14651647 Msa0009800:intron 35.0%
TTAAGATAATGCAGCACAGA+AGG - chr1_1:14651700-14651719 None:intergenic 35.0%
GAACATAGGTTTACAACTAC+AGG - chr1_1:14651738-14651757 None:intergenic 35.0%
CTGTTGTAAACTCAGAACAT+AGG - chr1_1:14651752-14651771 None:intergenic 35.0%
! CTATGTTCTGAGTTTACAAC+AGG + chr1_1:14651750-14651769 Msa0009800:intron 35.0%
TGAGTTTACAACAGGCTTAT+AGG + chr1_1:14651758-14651777 Msa0009800:intron 35.0%
TTGCTAAATCAGTTGTTAGC+TGG + chr1_1:14652521-14652540 Msa0009800:intron 35.0%
! TTACTCTAGGAAATGGTTCA+AGG - chr1_1:14652597-14652616 None:intergenic 35.0%
AGCAGGTTAGAAATTACTCT+AGG - chr1_1:14652610-14652629 None:intergenic 35.0%
!!! TTTGTTTTTGAGCAATCAGC+AGG - chr1_1:14652627-14652646 None:intergenic 35.0%
GCATAATTGGATTGTTGTGT+TGG + chr1_1:14652691-14652710 Msa0009800:intron 35.0%
TATTAAGGGCAACAATTGCA+TGG - chr1_1:14652805-14652824 None:intergenic 35.0%
ATGATTGTTGCCTTGTGAAT+TGG - chr1_1:14652842-14652861 None:intergenic 35.0%
GTTGCAGAAGAACTTATCTT+TGG + chr1_1:14652971-14652990 Msa0009800:CDS 35.0%
CAGAAGAACTTATCTTTGGT+CGG + chr1_1:14652975-14652994 Msa0009800:CDS 35.0%
AGAAGAACTTATCTTTGGTC+GGG + chr1_1:14652976-14652995 Msa0009800:CDS 35.0%
GTTGATGTTCATTTGTGACT+TGG + chr1_1:14653159-14653178 Msa0009800:intron 35.0%
! TTCACAAGGTATCAAGTTGT+GGG + chr1_1:14653306-14653325 Msa0009800:intron 35.0%
GGTCTCTCCTTTATATGAAT+TGG - chr1_1:14653350-14653369 None:intergenic 35.0%
! TGTGAAAGCTCTTCTGAAAA+AGG + chr1_1:14653565-14653584 Msa0009800:CDS 35.0%
GTGCTGTAGTATTCTAATAG+TGG - chr1_1:14654143-14654162 None:intergenic 35.0%
!!! TGCTGAGGGCAATATTTTTT+TGG + chr1_1:14654164-14654183 Msa0009800:three_prime_UTR 35.0%
TTAAGAAGAGTAGAGGGGTT+AGG - chr1_1:14644398-14644417 None:intergenic 40.0%
GAGGTTTAAGAAGAGTAGAG+GGG - chr1_1:14644403-14644422 None:intergenic 40.0%
TTCTAGGTTAGGAGAATCGT+CGG - chr1_1:14644537-14644556 None:intergenic 40.0%
AAAGTGTGATGAAGAGAAGG+TGG + chr1_1:14644633-14644652 Msa0009800:intron 40.0%
AGAGTGGGGAAAAGAAAGAT+GGG + chr1_1:14644656-14644675 Msa0009800:intron 40.0%
!! CCGATAGTGGTGTTTTTGAT+TGG + chr1_1:14644685-14644704 Msa0009800:intron 40.0%
!! TGGTGTTTTTGATTGGGCTT+TGG + chr1_1:14644692-14644711 Msa0009800:intron 40.0%
!! GGTGTTTTTGATTGGGCTTT+GGG + chr1_1:14644693-14644712 Msa0009800:intron 40.0%
AGCGAAAGAAGGATTGAAGA+GGG + chr1_1:14644720-14644739 Msa0009800:CDS 40.0%
! CGTTTTCGGAATTGGTTGAT+TGG + chr1_1:14644743-14644762 Msa0009800:CDS 40.0%
TTTCGGAATTGGTTGATTGG+TGG + chr1_1:14644746-14644765 Msa0009800:CDS 40.0%
! ATTGGCGAAGTTGATTACTG+AGG + chr1_1:14644792-14644811 Msa0009800:CDS 40.0%
TGTAGGACATGTAAACCAAG+TGG + chr1_1:14645001-14645020 Msa0009800:intron 40.0%
AAACGGTTCGTCTCTAACTA+AGG - chr1_1:14645260-14645279 None:intergenic 40.0%
! AGGACATGCAACAATTTGCT+TGG + chr1_1:14645351-14645370 Msa0009800:intron 40.0%
! GGACATGCAACAATTTGCTT+GGG + chr1_1:14645352-14645371 Msa0009800:intron 40.0%
GCCTAAGTGTATTGCATCTT+TGG - chr1_1:14645620-14645639 None:intergenic 40.0%
AATACACTTAGGCCCTGTTT+GGG + chr1_1:14645627-14645646 Msa0009800:intron 40.0%
!! GCTGTTTTCATATGCTATCG+TGG + chr1_1:14645766-14645785 Msa0009800:intron 40.0%
CTCGCAAATCTTATGTCTGT+TGG + chr1_1:14645863-14645882 Msa0009800:intron 40.0%
AGAATATCTTCGAGCACTAG+TGG + chr1_1:14646159-14646178 Msa0009800:CDS 40.0%
TGCAGAATATCTTCCTGATG+AGG + chr1_1:14646195-14646214 Msa0009800:CDS 40.0%
TATCTTCCTGATGAGGAATC+TGG + chr1_1:14646202-14646221 Msa0009800:CDS 40.0%
AGTGCTTCATTGTTCACTAG+TGG + chr1_1:14646309-14646328 Msa0009800:intron 40.0%
TAGCTACAAAACAAGATGCC+TGG - chr1_1:14646348-14646367 None:intergenic 40.0%
CCAAAACCATAAGCAGCTTA+AGG - chr1_1:14646468-14646487 None:intergenic 40.0%
! CCTTAAGCTGCTTATGGTTT+TGG + chr1_1:14646465-14646484 Msa0009800:intron 40.0%
! GACTTTCTTTTACTACCGAG+AGG + chr1_1:14646657-14646676 Msa0009800:intron 40.0%
! TGTGTTCAGGTTATGAGACT+TGG - chr1_1:14646688-14646707 None:intergenic 40.0%
!! AAGATGACGGAGAAATTAGG+GGG + chr1_1:14646747-14646766 Msa0009800:intron 40.0%
!! TGATTTAAGTTGGGGGAATG+AGG + chr1_1:14646781-14646800 Msa0009800:intron 40.0%
GAGAAGTGAATGCATTTGAG+AGG + chr1_1:14647000-14647019 Msa0009800:intron 40.0%
AGTTGCAAGAGTTGAAACAG+CGG + chr1_1:14647395-14647414 Msa0009800:intron 40.0%
TTTACCATAACCACGTGCAA+CGG - chr1_1:14647475-14647494 None:intergenic 40.0%
TACAAGTATGCATCAAAGGG+TGG - chr1_1:14647822-14647841 None:intergenic 40.0%
TGTACGTCTGTCAGGTTTAT+GGG + chr1_1:14647849-14647868 Msa0009800:intron 40.0%
! TTCCTTGTTTAGCTCCTTTG+GGG - chr1_1:14647952-14647971 None:intergenic 40.0%
! CTTCCTTGTTTAGCTCCTTT+GGG - chr1_1:14647953-14647972 None:intergenic 40.0%
! ACTTCCTTGTTTAGCTCCTT+TGG - chr1_1:14647954-14647973 None:intergenic 40.0%
TGTCCAACTTTCTTGTTGAC+TGG - chr1_1:14648336-14648355 None:intergenic 40.0%
TGATGCAAAGCAAGAACTTG+AGG + chr1_1:14648571-14648590 Msa0009800:CDS 40.0%
CTCTAGTCCAATCACTGTTT+AGG + chr1_1:14648764-14648783 Msa0009800:intron 40.0%
! GCTAAGATGATCCTCTTTTC+AGG + chr1_1:14649031-14649050 Msa0009800:intron 40.0%
!! GTTCCATTTTTCTATCGTGC+CGG + chr1_1:14649331-14649350 Msa0009800:CDS 40.0%
!!! ATTTTTCTATCGTGCCGGTT+CGG + chr1_1:14649336-14649355 Msa0009800:CDS 40.0%
GGCACATGATATGCTAGAAA+AGG + chr1_1:14649407-14649426 Msa0009800:intron 40.0%
AACGACTATGTTGTCAATCG+TGG + chr1_1:14649482-14649501 Msa0009800:intron 40.0%
ATGTTGTCAATCGTGGATAG+TGG + chr1_1:14649489-14649508 Msa0009800:intron 40.0%
ATGAAGTTGCCATGACTGAA+CGG + chr1_1:14649809-14649828 Msa0009800:intron 40.0%
TTGTCCGAATAGAACAGAGA+AGG - chr1_1:14649917-14649936 None:intergenic 40.0%
TCTGTTCTATTCGGACAACA+GGG + chr1_1:14649919-14649938 Msa0009800:intron 40.0%
TCTGCAAGCAGAACAAGAAA+GGG - chr1_1:14650053-14650072 None:intergenic 40.0%
TTCTGCAAGCAGAACAAGAA+AGG - chr1_1:14650054-14650073 None:intergenic 40.0%
TTCTTGTTCTGCTTGCAGAA+TGG + chr1_1:14650054-14650073 Msa0009800:intron 40.0%
! TGCTTGCAGAATGGATGTTT+TGG + chr1_1:14650063-14650082 Msa0009800:intron 40.0%
AGAGAAGGAAAGGGAATGTT+AGG + chr1_1:14650104-14650123 Msa0009800:intron 40.0%
GAGAAGGAAAGGGAATGTTA+GGG + chr1_1:14650105-14650124 Msa0009800:intron 40.0%
CCCGTAAAATAGAGTCTGTT+AGG - chr1_1:14650159-14650178 None:intergenic 40.0%
CAACAGATGTACTACAATGC+GGG - chr1_1:14650201-14650220 None:intergenic 40.0%
CTGTTTCCTAGTTGATCCAA+CGG - chr1_1:14650720-14650739 None:intergenic 40.0%
TTGGATCAACTAGGAAACAG+TGG + chr1_1:14650720-14650739 Msa0009800:CDS 40.0%
TGGATCAACTAGGAAACAGT+GGG + chr1_1:14650721-14650740 Msa0009800:CDS 40.0%
!! AAGTTGGTGCAATGTCTTCT+TGG - chr1_1:14650756-14650775 None:intergenic 40.0%
GCACCAACTTCTTGTTGAAA+TGG + chr1_1:14650766-14650785 Msa0009800:CDS 40.0%
AGAGCTGGATCAAGAATATC+AGG - chr1_1:14650917-14650936 None:intergenic 40.0%
ACATGTCGATCAAATCTACC+AGG - chr1_1:14650947-14650966 None:intergenic 40.0%
! CTGGATTTGGTACAACAATC+TGG - chr1_1:14651202-14651221 None:intergenic 40.0%
GATATTAAAGCAATAGCCCG+TGG + chr1_1:14651287-14651306 Msa0009800:CDS 40.0%
TAATAGCAGCAATGTTCACC+AGG - chr1_1:14651458-14651477 None:intergenic 40.0%
CATTGCTGCTATTAAAGCTG+CGG + chr1_1:14651464-14651483 Msa0009800:CDS 40.0%
TGTATCGGAGGAGTCAAAAA+AGG + chr1_1:14651572-14651591 Msa0009800:CDS 40.0%
TTACAACTACAGGGAAGACT+CGG - chr1_1:14651728-14651747 None:intergenic 40.0%
! CTACCCCTTTCAACACTTTT+GGG - chr1_1:14652439-14652458 None:intergenic 40.0%
! ACTACCCCTTTCAACACTTT+TGG - chr1_1:14652440-14652459 None:intergenic 40.0%
!! TTGTTAGCTGGTGAGTTGAT+AGG + chr1_1:14652533-14652552 Msa0009800:intron 40.0%
AGGAAATGGTTCAAGGTACA+GGG - chr1_1:14652590-14652609 None:intergenic 40.0%
TAGGAAATGGTTCAAGGTAC+AGG - chr1_1:14652591-14652610 None:intergenic 40.0%
CATAACTGAGCATGCATCAA+TGG - chr1_1:14652734-14652753 None:intergenic 40.0%
CTTACTGCTTATCATGAGAG+CGG + chr1_1:14652779-14652798 Msa0009800:CDS 40.0%
ATTGTTGCCCTTAATACCGA+CGG + chr1_1:14652809-14652828 Msa0009800:CDS 40.0%
AGCTCGTCTTGATGTTTGTA+TGG + chr1_1:14652940-14652959 Msa0009800:CDS 40.0%
GCTCGTCTTGATGTTTGTAT+GGG + chr1_1:14652941-14652960 Msa0009800:CDS 40.0%
! CTTCACAAGGTATCAAGTTG+TGG + chr1_1:14653305-14653324 Msa0009800:intron 40.0%
TGTGGGATGAGTGATACAAT+CGG + chr1_1:14653323-14653342 Msa0009800:intron 40.0%
AGTTTAACAACCTGCAGAAC+AGG - chr1_1:14653524-14653543 None:intergenic 40.0%
CACGATCATATGCATCTCTA+AGG - chr1_1:14653547-14653566 None:intergenic 40.0%
AGGAAAACTTCCAGAACAAC+AGG + chr1_1:14653876-14653895 Msa0009800:CDS 40.0%
TCTTCTTGTTCCTGTTGTTC+TGG - chr1_1:14653889-14653908 None:intergenic 40.0%
AGGAACAAGAAGAAGCAGAA+GGG + chr1_1:14653896-14653915 Msa0009800:CDS 40.0%
! GATAAGAATTGCATGGGCTA+AGG - chr1_1:14654043-14654062 None:intergenic 40.0%
AATCCTGCTAACGATGACAA+AGG + chr1_1:14654116-14654135 Msa0009800:three_prime_UTR 40.0%
! AATACTACAGCACTTGCTGA+GGG + chr1_1:14654150-14654169 Msa0009800:three_prime_UTR 40.0%
AACCTTGCTAAGAGACACTT+GGG - chr1_1:14654312-14654331 None:intergenic 40.0%
TAACCTTGCTAAGAGACACT+TGG - chr1_1:14654313-14654332 None:intergenic 40.0%
ATGAGGAATGGGAAGAGAAG+AGG - chr1_1:14644374-14644393 None:intergenic 45.0%
AGGGGTTAGGAATGAGGAAT+GGG - chr1_1:14644385-14644404 None:intergenic 45.0%
! GGTTGAAAAGTGCAGAGAAG+GGG - chr1_1:14644470-14644489 None:intergenic 45.0%
! GGGTTGAAAAGTGCAGAGAA+GGG - chr1_1:14644471-14644490 None:intergenic 45.0%
GATAGGTTCGGGATTAGGTT+CGG - chr1_1:14644513-14644532 None:intergenic 45.0%
AGAATCGTCGGAGATAGGTT+CGG - chr1_1:14644525-14644544 None:intergenic 45.0%
TTAGGAGAATCGTCGGAGAT+AGG - chr1_1:14644530-14644549 None:intergenic 45.0%
ATGAAGAGAAGGTGGAGAGT+GGG + chr1_1:14644641-14644660 Msa0009800:intron 45.0%
GAGAGTGGGGAAAAGAAAGA+TGG + chr1_1:14644655-14644674 Msa0009800:intron 45.0%
AGATGGGAGATTACCGATAG+TGG + chr1_1:14644672-14644691 Msa0009800:intron 45.0%
GAGCGAAAGAAGGATTGAAG+AGG + chr1_1:14644719-14644738 Msa0009800:intron 45.0%
!!! AGGATTGAAGAGGGCGTTTT+CGG + chr1_1:14644729-14644748 Msa0009800:CDS 45.0%
TTCTTCTCCTGCCTCCAAAA+CGG - chr1_1:14644772-14644791 None:intergenic 45.0%
TTGGAGGCAGGAGAAGAAAT+TGG + chr1_1:14644774-14644793 Msa0009800:CDS 45.0%
GGACATGTAAACCAAGTGGT+TGG + chr1_1:14645005-14645024 Msa0009800:intron 45.0%
!! TAGTGGCTCTAAGTTCAGTC+AGG - chr1_1:14645303-14645322 None:intergenic 45.0%
GACTGAACTTAGAGCCACTA+AGG + chr1_1:14645303-14645322 Msa0009800:intron 45.0%
CAATACACTTAGGCCCTGTT+TGG + chr1_1:14645626-14645645 Msa0009800:intron 45.0%
! GGTTTTCCAGATTCCTCATC+AGG - chr1_1:14646211-14646230 None:intergenic 45.0%
GAGGAATCTGGAAAACCTTC+TGG + chr1_1:14646214-14646233 Msa0009800:CDS 45.0%
GCTTCATTGTTCACTAGTGG+AGG + chr1_1:14646312-14646331 Msa0009800:intron 45.0%
TCATTGTTCACTAGTGGAGG+TGG + chr1_1:14646315-14646334 Msa0009800:intron 45.0%
!! AGATGACGGAGAAATTAGGG+GGG + chr1_1:14646748-14646767 Msa0009800:intron 45.0%
!! TTTAAGTTGGGGGAATGAGG+TGG + chr1_1:14646784-14646803 Msa0009800:intron 45.0%
ATTAGGTTCGTCAACGACCT+TGG - chr1_1:14647079-14647098 None:intergenic 45.0%
GTTGCAAGAGTTGAAACAGC+GGG + chr1_1:14647396-14647415 Msa0009800:intron 45.0%
! GATGAGACTTTTCTGAACCC+TGG + chr1_1:14647433-14647452 Msa0009800:CDS 45.0%
GCTGCTTCTCAGATATTCCA+GGG - chr1_1:14647453-14647472 None:intergenic 45.0%
GTTTACCGTAGCTGTTGGAT+TGG + chr1_1:14647737-14647756 Msa0009800:CDS 45.0%
GAGAGAGATAGGGAAACTAG+AGG - chr1_1:14647774-14647793 None:intergenic 45.0%
ATTCCTACTGTACGTCTGTC+AGG + chr1_1:14647841-14647860 Msa0009800:intron 45.0%
AAACCTGACAGACGTACAGT+AGG - chr1_1:14647847-14647866 None:intergenic 45.0%
CTGTACGTCTGTCAGGTTTA+TGG + chr1_1:14647848-14647867 Msa0009800:intron 45.0%
AAATACATCGGAAGCTTGGG+TGG + chr1_1:14647888-14647907 Msa0009800:CDS 45.0%
AATACATCGGAAGCTTGGGT+GGG + chr1_1:14647889-14647908 Msa0009800:CDS 45.0%
TACCCCAAAGGAGCTAAACA+AGG + chr1_1:14647947-14647966 Msa0009800:CDS 45.0%
CAAGGAAGTGATGCCAGAAA+AGG + chr1_1:14647965-14647984 Msa0009800:CDS 45.0%
TGGGTTGTCAGTGAGTATCT+TGG + chr1_1:14648117-14648136 Msa0009800:intron 45.0%
CGACCAGTCAACAAGAAAGT+TGG + chr1_1:14648330-14648349 Msa0009800:intron 45.0%
ACTTCAAGAACTAATGGGGG+TGG - chr1_1:14648365-14648384 None:intergenic 45.0%
TGCAAAGCAAGAACTTGAGG+AGG + chr1_1:14648574-14648593 Msa0009800:CDS 45.0%
CCAAGGCGAGTAAATTTAGC+TGG - chr1_1:14648620-14648639 None:intergenic 45.0%
CCAGCTAAATTTACTCGCCT+TGG + chr1_1:14648617-14648636 Msa0009800:CDS 45.0%
GCTAAATTTACTCGCCTTGG+AGG + chr1_1:14648620-14648639 Msa0009800:CDS 45.0%
CAGAAGAATCCCCTGAAAAG+AGG - chr1_1:14649045-14649064 None:intergenic 45.0%
TTTCAGGGGATTCTTCTGAC+TGG + chr1_1:14649047-14649066 Msa0009800:intron 45.0%
TTCAGGGGATTCTTCTGACT+GGG + chr1_1:14649048-14649067 Msa0009800:intron 45.0%
! AGCAGAGTTTTTCCAGTTCC+AGG - chr1_1:14649077-14649096 None:intergenic 45.0%
TGGAAAAACTCTGCTAGCCA+AGG + chr1_1:14649082-14649101 Msa0009800:CDS 45.0%
AAGGACTTAAATCCGGACTC+TGG + chr1_1:14649147-14649166 Msa0009800:intron 45.0%
CACAGATAAGAACCAGAGTC+CGG - chr1_1:14649162-14649181 None:intergenic 45.0%
! TGCTATATCTGGGACCTTGA+AGG + chr1_1:14649288-14649307 Msa0009800:intron 45.0%
TTCTCCAGCAATAGCCTTCA+AGG - chr1_1:14649305-14649324 None:intergenic 45.0%
GAACCGGCACGATAGAAAAA+TGG - chr1_1:14649337-14649356 None:intergenic 45.0%
CATCTCCTCAAATTCCGAAC+CGG - chr1_1:14649353-14649372 None:intergenic 45.0%
TATACCAGGATAGCATGTGG+TGG + chr1_1:14649538-14649557 Msa0009800:intron 45.0%
ATACCAGGATAGCATGTGGT+GGG + chr1_1:14649539-14649558 Msa0009800:intron 45.0%
AACAGAGAAGGCCGCATTAA+GGG - chr1_1:14649905-14649924 None:intergenic 45.0%
CTCTGTTCTATTCGGACAAC+AGG + chr1_1:14649918-14649937 Msa0009800:intron 45.0%
! TGCACTGAAATTGTGCTGCT+CGG + chr1_1:14649978-14649997 Msa0009800:intron 45.0%
AGAATACAGATGCAGTGGCA+GGG + chr1_1:14650001-14650020 Msa0009800:intron 45.0%
AACAAGAAAGGGAACCTCTG+CGG - chr1_1:14650042-14650061 None:intergenic 45.0%
AGTACATCTGTTGTGCCACA+AGG + chr1_1:14650208-14650227 Msa0009800:intron 45.0%
GTACATCTGTTGTGCCACAA+GGG + chr1_1:14650209-14650228 Msa0009800:intron 45.0%
AGATCTGTGGCGCTATACAT+TGG + chr1_1:14650314-14650333 Msa0009800:intron 45.0%
! TGTTGGCTGGTATGGATGAT+AGG + chr1_1:14650462-14650481 Msa0009800:intron 45.0%
CTGTTCATGCTCAGGTTTGT+TGG + chr1_1:14650495-14650514 Msa0009800:intron 45.0%
!! ATGCTCAGGTTTGTTGGAGT+TGG + chr1_1:14650501-14650520 Msa0009800:intron 45.0%
CATGTAGAAGTCCTGTGTGT+TGG - chr1_1:14650622-14650641 None:intergenic 45.0%
TTGATGCCGTTGGATCAACT+AGG + chr1_1:14650711-14650730 Msa0009800:CDS 45.0%
ATCAACTAGGAAACAGTGGG+AGG + chr1_1:14650724-14650743 Msa0009800:CDS 45.0%
TCAACTAGGAAACAGTGGGA+GGG + chr1_1:14650725-14650744 Msa0009800:CDS 45.0%
GTACCAAATCCAGATGTACG+TGG + chr1_1:14651209-14651228 Msa0009800:CDS 45.0%
CAAATCCAGATGTACGTGGT+CGG + chr1_1:14651213-14651232 Msa0009800:CDS 45.0%
ACGTGGTCGGCAAGAAATAT+TGG + chr1_1:14651226-14651245 Msa0009800:CDS 45.0%
TACACTAGATCTGGCAAACC+TGG + chr1_1:14651437-14651456 Msa0009800:intron 45.0%
GCTATTAAAGCTGCGGTTGA+AGG + chr1_1:14651471-14651490 Msa0009800:CDS 45.0%
TACAACTACAGGGAAGACTC+GGG - chr1_1:14651727-14651746 None:intergenic 45.0%
!! TCCAGCCCAAAAGTGTTGAA+AGG + chr1_1:14652431-14652450 Msa0009800:intron 45.0%
!! CCAGCCCAAAAGTGTTGAAA+GGG + chr1_1:14652432-14652451 Msa0009800:intron 45.0%
!! CAGCCCAAAAGTGTTGAAAG+GGG + chr1_1:14652433-14652452 Msa0009800:intron 45.0%
!! AGCTGGTGAGTTGATAGGAT+AGG + chr1_1:14652538-14652557 Msa0009800:intron 45.0%
ATGTGCACCGTCGGTATTAA+GGG - chr1_1:14652819-14652838 None:intergenic 45.0%
ATTCCTAAAGCAGATCCACG+GGG - chr1_1:14652866-14652885 None:intergenic 45.0%
CATTCCTAAAGCAGATCCAC+GGG - chr1_1:14652867-14652886 None:intergenic 45.0%
CCATTCCTAAAGCAGATCCA+CGG - chr1_1:14652868-14652887 None:intergenic 45.0%
CGTCTTGATGTTTGTATGGG+AGG + chr1_1:14652944-14652963 Msa0009800:CDS 45.0%
TACCATGTATTGCGCAAGCT+CGG - chr1_1:14653044-14653063 None:intergenic 45.0%
! TATGCTGCTTCCCTGTTATG+TGG + chr1_1:14653065-14653084 Msa0009800:intron 45.0%
GCTGCACTTTCCACATAACA+GGG - chr1_1:14653078-14653097 None:intergenic 45.0%
AGCTGCACTTTCCACATAAC+AGG - chr1_1:14653079-14653098 None:intergenic 45.0%
CGTGACTGCATTTCAGAACT+TGG - chr1_1:14653371-14653390 None:intergenic 45.0%
GACGATTACTTCTCCCGTAT+CGG + chr1_1:14653851-14653870 Msa0009800:CDS 45.0%
ACGATTACTTCTCCCGTATC+GGG + chr1_1:14653852-14653871 Msa0009800:CDS 45.0%
! GAAGTTTTCCTTCCCGATAC+GGG - chr1_1:14653867-14653886 None:intergenic 45.0%
! GGAAGTTTTCCTTCCCGATA+CGG - chr1_1:14653868-14653887 None:intergenic 45.0%
CAGGAACAAGAAGAAGCAGA+AGG + chr1_1:14653895-14653914 Msa0009800:CDS 45.0%
GGAACAAGAAGAAGCAGAAG+GGG + chr1_1:14653897-14653916 Msa0009800:CDS 45.0%
AGCAGAAGGGGATCTTGTAT+TGG + chr1_1:14653909-14653928 Msa0009800:CDS 45.0%
! AGAATTGCATGGGCTAAGGA+GGG - chr1_1:14654039-14654058 None:intergenic 45.0%
! AAGAATTGCATGGGCTAAGG+AGG - chr1_1:14654040-14654059 None:intergenic 45.0%
! GAATACTACAGCACTTGCTG+AGG + chr1_1:14654149-14654168 Msa0009800:three_prime_UTR 45.0%
!!! TTTTTTTTTTTTTTTTATCT+AGG - chr1_1:14648960-14648979 None:intergenic 5.0%
!! ATAAAAATGATAAATAAATT+TGG - chr1_1:14650857-14650876 None:intergenic 5.0%
GAGGGGTTAGGAATGAGGAA+TGG - chr1_1:14644386-14644405 None:intergenic 50.0%
GAGTAGAGGGGTTAGGAATG+AGG - chr1_1:14644391-14644410 None:intergenic 50.0%
! CGGGTTGAAAAGTGCAGAGA+AGG - chr1_1:14644472-14644491 None:intergenic 50.0%
! GAGTGGGGAAGTGTAGTATC+GGG - chr1_1:14644491-14644510 None:intergenic 50.0%
! GGAGTGGGGAAGTGTAGTAT+CGG - chr1_1:14644492-14644511 None:intergenic 50.0%
TTCGGGATTAGGTTCGGAGT+GGG - chr1_1:14644507-14644526 None:intergenic 50.0%
TCGGAGATAGGTTCGGGATT+AGG - chr1_1:14644518-14644537 None:intergenic 50.0%
GAATCGTCGGAGATAGGTTC+GGG - chr1_1:14644524-14644543 None:intergenic 50.0%
GATGAAGAGAAGGTGGAGAG+TGG + chr1_1:14644640-14644659 Msa0009800:intron 50.0%
TGAAGAGAAGGTGGAGAGTG+GGG + chr1_1:14644642-14644661 Msa0009800:intron 50.0%
CTTTGGGTGAGAGCGAAAGA+AGG + chr1_1:14644709-14644728 Msa0009800:intron 50.0%
!!! GAAGAGGGCGTTTTCGGAAT+TGG + chr1_1:14644735-14644754 Msa0009800:CDS 50.0%
!! TGGTTGATTGGTGGCCGTTT+TGG + chr1_1:14644755-14644774 Msa0009800:CDS 50.0%
!! TTGATTGGTGGCCGTTTTGG+AGG + chr1_1:14644758-14644777 Msa0009800:CDS 50.0%
TTACTGAGGCCGATGCGAAT+CGG + chr1_1:14644806-14644825 Msa0009800:CDS 50.0%
!! AGCATCCAACCGATTCGCAT+CGG - chr1_1:14644818-14644837 None:intergenic 50.0%
ATCACTCGAGTCCAACCACT+TGG - chr1_1:14645019-14645038 None:intergenic 50.0%
TCTCTAACTAAGGCCCCGTT+TGG - chr1_1:14645250-14645269 None:intergenic 50.0%
TGAAGAAAGGGACAGAGCTG+TGG + chr1_1:14646120-14646139 Msa0009800:CDS 50.0%
!! ACCTTCTGGAATTCCCTCCT+TGG + chr1_1:14646228-14646247 Msa0009800:CDS 50.0%
ACCAAGGAGGGAATTCCAGA+AGG - chr1_1:14646232-14646251 None:intergenic 50.0%
!! TGAGACTTGGTTCTGCCTCT+CGG - chr1_1:14646675-14646694 None:intergenic 50.0%
GGGGGAATGAGGTGGAAAAA+TGG + chr1_1:14646792-14646811 Msa0009800:intron 50.0%
GGCTGCTTCTCAGATATTCC+AGG - chr1_1:14647454-14647473 None:intergenic 50.0%
CCAGACCAATCCAACAGCTA+CGG - chr1_1:14647745-14647764 None:intergenic 50.0%
!! TTGGGTGGGATTGGTTCTTC+AGG + chr1_1:14647903-14647922 Msa0009800:CDS 50.0%
!! GGGATTGGTTCTTCAGGTGT+TGG + chr1_1:14647909-14647928 Msa0009800:CDS 50.0%
AGTTTCCTTATCCAGTGCCC+CGG - chr1_1:14648199-14648218 None:intergenic 50.0%
GCAAGAACTTGAGGAGGTTG+TGG + chr1_1:14648580-14648599 Msa0009800:CDS 50.0%
TCAGGGGATTCTTCTGACTG+GGG + chr1_1:14649049-14649068 Msa0009800:intron 50.0%
AAGGCTATTGCTGGAGAAGC+CGG + chr1_1:14649307-14649326 Msa0009800:intron 50.0%
AAGTTGCCATGACTGAACGG+AGG + chr1_1:14649812-14649831 Msa0009800:intron 50.0%
GAACAGAGAAGGCCGCATTA+AGG - chr1_1:14649906-14649925 None:intergenic 50.0%
GCGGCCTTCTCTGTTCTATT+CGG + chr1_1:14649910-14649929 Msa0009800:intron 50.0%
CTCGGAGAATACAGATGCAG+TGG + chr1_1:14649996-14650015 Msa0009800:intron 50.0%
GAGAATACAGATGCAGTGGC+AGG + chr1_1:14650000-14650019 Msa0009800:intron 50.0%
TGTCTGGACTCATTCCCTTG+TGG - chr1_1:14650226-14650245 None:intergenic 50.0%
!! GGTTTGTTGGAGTTGGTGCT+CGG + chr1_1:14650508-14650527 Msa0009800:intron 50.0%
GGTGCAATGTCTTCTTGGTG+TGG - chr1_1:14650751-14650770 None:intergenic 50.0%
! GGATGGGTTTGAGCAGAATG+AGG + chr1_1:14650787-14650806 Msa0009800:CDS 50.0%
TCAATCCAGGTCGTTCTACC+CGG + chr1_1:14651127-14651146 Msa0009800:intron 50.0%
ATTAACCGGGTAGAACGACC+TGG - chr1_1:14651135-14651154 None:intergenic 50.0%
CGACCACGTACATCTGGATT+TGG - chr1_1:14651215-14651234 None:intergenic 50.0%
CGGCTGTAGGTTTATCATGC+AGG - chr1_1:14651259-14651278 None:intergenic 50.0%
! ATTGAATCCTGGGGTACCAC+GGG - chr1_1:14651306-14651325 None:intergenic 50.0%
! CATTGAATCCTGGGGTACCA+CGG - chr1_1:14651307-14651326 None:intergenic 50.0%
GTGGTACCCCAGGATTCAAT+GGG + chr1_1:14651306-14651325 Msa0009800:CDS 50.0%
TGGTACCCCAGGATTCAATG+GGG + chr1_1:14651307-14651326 Msa0009800:CDS 50.0%
! CCCTTTCAACACTTTTGGGC+TGG - chr1_1:14652435-14652454 None:intergenic 50.0%
GATGTGCACCGTCGGTATTA+AGG - chr1_1:14652820-14652839 None:intergenic 50.0%
GTGAATTGGATGTGCACCGT+CGG - chr1_1:14652828-14652847 None:intergenic 50.0%
CGGTGCACATCCAATTCACA+AGG + chr1_1:14652829-14652848 Msa0009800:CDS 50.0%
!! CCGTGGATCTGCTTTAGGAA+TGG + chr1_1:14652865-14652884 Msa0009800:CDS 50.0%
GGTCGGGATAATGTCACAAC+TGG + chr1_1:14652992-14653011 Msa0009800:CDS 50.0%
TACCGAGCTTGCGCAATACA+TGG + chr1_1:14653039-14653058 Msa0009800:CDS 50.0%
! GCAGTCACGTATTGATGCAG+AGG + chr1_1:14653382-14653401 Msa0009800:intron 50.0%
! CTGAGCTTTTCCTGTTCTGC+AGG + chr1_1:14653511-14653530 Msa0009800:intron 50.0%
TTACTTCTCCCGTATCGGGA+AGG + chr1_1:14653856-14653875 Msa0009800:CDS 50.0%
GGACCTTTGTCATCGTTAGC+AGG - chr1_1:14654122-14654141 None:intergenic 50.0%
GACCCAAGTGTCTCTTAGCA+AGG + chr1_1:14654307-14654326 Msa0009800:three_prime_UTR 50.0%
CGCGTGGGATTGAAGTGATG+AGG - chr1_1:14644422-14644441 None:intergenic 55.0%
GTGCAGAGAAGGGGAGTGAA+GGG - chr1_1:14644461-14644480 None:intergenic 55.0%
AGTGCAGAGAAGGGGAGTGA+AGG - chr1_1:14644462-14644481 None:intergenic 55.0%
TCGGGATTAGGTTCGGAGTG+GGG - chr1_1:14644506-14644525 None:intergenic 55.0%
GTTCGGGATTAGGTTCGGAG+TGG - chr1_1:14644508-14644527 None:intergenic 55.0%
GACAGAGCTGTGGACAGTAG+AGG + chr1_1:14646130-14646149 Msa0009800:CDS 55.0%
GAGGCGGTTCCTCCGAAATT+CGG - chr1_1:14646632-14646651 None:intergenic 55.0%
GAGTTGAAACAGCGGGCATC+TGG + chr1_1:14647403-14647422 Msa0009800:CDS 55.0%
!! CCGTAGCTGTTGGATTGGTC+TGG + chr1_1:14647742-14647761 Msa0009800:CDS 55.0%
ATCGGAAGCTTGGGTGGGAT+TGG + chr1_1:14647894-14647913 Msa0009800:CDS 55.0%
GTCATGTTAACCAGTGCCCC+CGG + chr1_1:14648177-14648196 Msa0009800:intron 55.0%
TCATGTTAACCAGTGCCCCC+GGG + chr1_1:14648178-14648197 Msa0009800:intron 55.0%
TTTCCTTATCCAGTGCCCCG+GGG - chr1_1:14648197-14648216 None:intergenic 55.0%
GTTTCCTTATCCAGTGCCCC+GGG - chr1_1:14648198-14648217 None:intergenic 55.0%
CCTTTGGCAGCTTTCCTCCA+AGG - chr1_1:14648637-14648656 None:intergenic 55.0%
CCTTGGAGGAAAGCTGCCAA+AGG + chr1_1:14648634-14648653 Msa0009800:CDS 55.0%
! ATTCTTCTGACTGGGGCACC+TGG + chr1_1:14649056-14649075 Msa0009800:CDS 55.0%
GGGACCTTGAAGGCTATTGC+TGG + chr1_1:14649298-14649317 Msa0009800:intron 55.0%
!! TCGTGCCGGTTCGGAATTTG+AGG + chr1_1:14649345-14649364 Msa0009800:CDS 55.0%
CATCCCACCACATGCTATCC+TGG - chr1_1:14649545-14649564 None:intergenic 55.0%
! CAGGATAGCATGTGGTGGGA+TGG + chr1_1:14649543-14649562 Msa0009800:intron 55.0%
TTGCCATGACTGAACGGAGG+AGG + chr1_1:14649815-14649834 Msa0009800:intron 55.0%
TGCCATGACTGAACGGAGGA+GGG + chr1_1:14649816-14649835 Msa0009800:intron 55.0%
TTCCCTCCTCCGTTCAGTCA+TGG - chr1_1:14649821-14649840 None:intergenic 55.0%
AGATGCAGTGGCAGGGTTGA+CGG + chr1_1:14650008-14650027 Msa0009800:intron 55.0%
! GATCCAGCTCTAACGAGACC+TGG + chr1_1:14650926-14650945 Msa0009800:CDS 55.0%
CTACCAGGTCTCGTTAGAGC+TGG - chr1_1:14650932-14650951 None:intergenic 55.0%
TCTTGCCGACCACGTACATC+TGG - chr1_1:14651221-14651240 None:intergenic 55.0%
CGTGGTACCCCAGGATTCAA+TGG + chr1_1:14651305-14651324 Msa0009800:CDS 55.0%
ACCTGCCCCATTGAATCCTG+GGG - chr1_1:14651315-14651334 None:intergenic 55.0%
CACCTGCCCCATTGAATCCT+GGG - chr1_1:14651316-14651335 None:intergenic 55.0%
TCACCTGCCCCATTGAATCC+TGG - chr1_1:14651317-14651336 None:intergenic 55.0%
AAGGCAACAATCATGCCCCG+TGG + chr1_1:14652848-14652867 Msa0009800:CDS 55.0%
ATGCCCCGTGGATCTGCTTT+AGG + chr1_1:14652860-14652879 Msa0009800:CDS 55.0%
!!! TTGGTGGCCGTTTTGGAGGC+AGG + chr1_1:14644762-14644781 Msa0009800:CDS 60.0%
TGAGGCCGATGCGAATCGGT+TGG + chr1_1:14644810-14644829 Msa0009800:CDS 60.0%
AGTGGAGGTGGAGTGCAACC+AGG + chr1_1:14646327-14646346 Msa0009800:intron 60.0%
TGAGAAGCAGCCGTTGCACG+TGG + chr1_1:14647462-14647481 Msa0009800:CDS 60.0%
GCAGCCGTTGCACGTGGTTA+TGG + chr1_1:14647468-14647487 Msa0009800:CDS 60.0%
CATGTTAACCAGTGCCCCCG+GGG + chr1_1:14648179-14648198 Msa0009800:intron 60.0%
TTCCTTATCCAGTGCCCCGG+GGG - chr1_1:14648196-14648215 None:intergenic 60.0%
ACCCCAGGATTCAATGGGGC+AGG + chr1_1:14651311-14651330 Msa0009800:CDS 60.0%
AGGGGAGTGAAGGGAACGCG+CGG - chr1_1:14644452-14644471 None:intergenic 65.0%
! CTGACTGGGGCACCTGGAAC+TGG + chr1_1:14649062-14649081 Msa0009800:CDS 65.0%
TGCAGTGGCAGGGTTGACGG+TGG + chr1_1:14650011-14650030 Msa0009800:intron 65.0%
GCAATAGCCCGTGGTACCCC+AGG + chr1_1:14651296-14651315 Msa0009800:CDS 65.0%
TGAAGGGAACGCGCGGGTGG+AGG - chr1_1:14644445-14644464 None:intergenic 70.0%
GAGTGAAGGGAACGCGCGGG+TGG - chr1_1:14644448-14644467 None:intergenic 70.0%
GGGGAGTGAAGGGAACGCGC+GGG - chr1_1:14644451-14644470 None:intergenic 70.0%
!! TGCCCCCGGGGCACTGGATA+AGG + chr1_1:14648191-14648210 Msa0009800:intron 70.0%
TGACGGTGGCTGCTCCGCAG+AGG + chr1_1:14650025-14650044 Msa0009800:intron 70.0%
AACCAGTGCCCCCGGGGCAC+TGG + chr1_1:14648185-14648204 Msa0009800:intron 75.0%
! ATCCAGTGCCCCGGGGGCAC+TGG - chr1_1:14648190-14648209 None:intergenic 75.0%
!! ACGCGCGGGTGGAGGCGCGT+GGG - chr1_1:14644437-14644456 None:intergenic 80.0%
!! AACGCGCGGGTGGAGGCGCG+TGG - chr1_1:14644438-14644457 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 14644338 14654348 14644338 ID=Msa0009800;Name=Msa0009800
chr1_1 mRNA 14644338 14654348 14644338 ID=Msa0009800-mRNA-1;Parent=Msa0009800;Name=Msa0009800-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.87|0.88|1|1|1|17|412|732
chr1_1 exon 14644338 14644651 14644338 ID=Msa0009800-mRNA-1:exon:5387;Parent=Msa0009800-mRNA-1
chr1_1 exon 14644720 14644878 14644720 ID=Msa0009800-mRNA-1:exon:5388;Parent=Msa0009800-mRNA-1
chr1_1 exon 14646096 14646249 14646096 ID=Msa0009800-mRNA-1:exon:5389;Parent=Msa0009800-mRNA-1
chr1_1 exon 14647397 14647489 14647397 ID=Msa0009800-mRNA-1:exon:5390;Parent=Msa0009800-mRNA-1
chr1_1 exon 14647678 14647763 14647678 ID=Msa0009800-mRNA-1:exon:5391;Parent=Msa0009800-mRNA-1
chr1_1 exon 14647863 14647986 14647863 ID=Msa0009800-mRNA-1:exon:5392;Parent=Msa0009800-mRNA-1
chr1_1 exon 14648536 14648655 14648536 ID=Msa0009800-mRNA-1:exon:5393;Parent=Msa0009800-mRNA-1
chr1_1 exon 14649053 14649103 14649053 ID=Msa0009800-mRNA-1:exon:5394;Parent=Msa0009800-mRNA-1
chr1_1 exon 14649310 14649371 14649310 ID=Msa0009800-mRNA-1:exon:5395;Parent=Msa0009800-mRNA-1
chr1_1 exon 14650509 14650566 14650509 ID=Msa0009800-mRNA-1:exon:5396;Parent=Msa0009800-mRNA-1
chr1_1 exon 14650683 14650808 14650683 ID=Msa0009800-mRNA-1:exon:5397;Parent=Msa0009800-mRNA-1
chr1_1 exon 14650884 14650964 14650884 ID=Msa0009800-mRNA-1:exon:5398;Parent=Msa0009800-mRNA-1
chr1_1 exon 14651203 14651332 14651203 ID=Msa0009800-mRNA-1:exon:5399;Parent=Msa0009800-mRNA-1
chr1_1 exon 14651445 14651593 14651445 ID=Msa0009800-mRNA-1:exon:5400;Parent=Msa0009800-mRNA-1
chr1_1 exon 14652779 14653060 14652779 ID=Msa0009800-mRNA-1:exon:5401;Parent=Msa0009800-mRNA-1
chr1_1 exon 14653533 14653586 14653533 ID=Msa0009800-mRNA-1:exon:5402;Parent=Msa0009800-mRNA-1
chr1_1 exon 14653781 14654348 14653781 ID=Msa0009800-mRNA-1:exon:5403;Parent=Msa0009800-mRNA-1
chr1_1 CDS 14644338 14644651 14644338 ID=Msa0009800-mRNA-1:cds;Parent=Msa0009800-mRNA-1
chr1_1 CDS 14644720 14644878 14644720 ID=Msa0009800-mRNA-1:cds;Parent=Msa0009800-mRNA-1
chr1_1 CDS 14646096 14646249 14646096 ID=Msa0009800-mRNA-1:cds;Parent=Msa0009800-mRNA-1
chr1_1 CDS 14647397 14647489 14647397 ID=Msa0009800-mRNA-1:cds;Parent=Msa0009800-mRNA-1
chr1_1 CDS 14647678 14647763 14647678 ID=Msa0009800-mRNA-1:cds;Parent=Msa0009800-mRNA-1
chr1_1 CDS 14647863 14647986 14647863 ID=Msa0009800-mRNA-1:cds;Parent=Msa0009800-mRNA-1
chr1_1 CDS 14648536 14648655 14648536 ID=Msa0009800-mRNA-1:cds;Parent=Msa0009800-mRNA-1
chr1_1 CDS 14649053 14649103 14649053 ID=Msa0009800-mRNA-1:cds;Parent=Msa0009800-mRNA-1
chr1_1 CDS 14649310 14649371 14649310 ID=Msa0009800-mRNA-1:cds;Parent=Msa0009800-mRNA-1
chr1_1 CDS 14650509 14650566 14650509 ID=Msa0009800-mRNA-1:cds;Parent=Msa0009800-mRNA-1
chr1_1 CDS 14650683 14650808 14650683 ID=Msa0009800-mRNA-1:cds;Parent=Msa0009800-mRNA-1
chr1_1 CDS 14650884 14650964 14650884 ID=Msa0009800-mRNA-1:cds;Parent=Msa0009800-mRNA-1
chr1_1 CDS 14651203 14651332 14651203 ID=Msa0009800-mRNA-1:cds;Parent=Msa0009800-mRNA-1
chr1_1 CDS 14651445 14651593 14651445 ID=Msa0009800-mRNA-1:cds;Parent=Msa0009800-mRNA-1
chr1_1 CDS 14652779 14653060 14652779 ID=Msa0009800-mRNA-1:cds;Parent=Msa0009800-mRNA-1
chr1_1 CDS 14653533 14653586 14653533 ID=Msa0009800-mRNA-1:cds;Parent=Msa0009800-mRNA-1
chr1_1 CDS 14653781 14653936 14653781 ID=Msa0009800-mRNA-1:cds;Parent=Msa0009800-mRNA-1
chr1_1 three_prime_UTR 14653937 14654348 14653937 ID=Msa0009800-mRNA-1:three_prime_utr;Parent=Msa0009800-mRNA-1
Gene Sequence

>Msa0009800

ATGGCAACACTTCAAGCTTCTCTTCTCTCTAAACCTCTTCTCTTCCCATTCCTCATTCCTAACCCCTCTACTCTTCTTAAACCTCATCACTTCAATCCCACGCGCCTCCACCCGCGCGTTCCCTTCACTCCCCTTCTCTGCACTTTTCAACCCGATACTACACTTCCCCACTCCGAACCTAATCCCGAACCTATCTCCGACGATTCTCCTAACCTAGAACCGTTAAATTCAACTGAAAACGATTCTGTTACGATTCTTGATTCAAATTCTTCGAATGAATCGAATTCGAGATTTGAAAGTGTGATGAAGAGAAGAGCGAAAGAAGGATTGAAGAGGGCGTTTTCGGAATTGGTTGATTGGTGGCCGTTTTGGAGGCAGGAGAAGAAATTGGCGAAGTTGATTACTGAGGCCGATGCGAATCGGTTGGATGCTGCTAAGCAAACTGCGCTTTTTGTTGAGCTTAATAAGCACAGTCCTGAGTCTGTGATAAAGATATTTGAAGAAAGGGACAGAGCTGTGGACAGTAGAGGAGTTGCAGAATATCTTCGAGCACTAGTGGTCACTAATGCTATTGCAGAATATCTTCCTGATGAGGAATCTGGAAAACCTTCTGGAATTCCCTCCTTGTTGCAAGAGTTGAAACAGCGGGCATCTGGTAACATAGATGAGACTTTTCTGAACCCTGGAATATCTGAGAAGCAGCCGTTGCACGTGGTTATGGTTGATCAGAAAGTATCAAACAAGTCACGTTTCGCACAAGAGCTTATCTCAACTATTTTGTTTACCGTAGCTGTTGGATTGGTCTGGTTTATGGGTGCTGCTGCACTTCAAAAATACATCGGAAGCTTGGGTGGGATTGGTTCTTCAGGTGTTGGTTCAAGTTCATCTTATACCCCAAAGGAGCTAAACAAGGAAGTGATGCCAGAAAAGAATGTAAAAACTTTTAAGGATGTGAAAGGTTGTGATGATGCAAAGCAAGAACTTGAGGAGGTTGTGGAGTACCTAAAAAATCCAGCTAAATTTACTCGCCTTGGAGGAAAGCTGCCAAAGGGGATTCTTCTGACTGGGGCACCTGGAACTGGAAAAACTCTGCTAGCCAAGGCTATTGCTGGAGAAGCCGGTGTTCCATTTTTCTATCGTGCCGGTTCGGAATTTGAGGAGATGTTTGTTGGAGTTGGTGCTCGGCGTGTAAGATCGTTATTTCAAGCAGCCAAAAAGAAGGCTCCTTGCATTATTTTCATTGATGAAATTGATGCCGTTGGATCAACTAGGAAACAGTGGGAGGGCCACACCAAGAAGACATTGCACCAACTTCTTGTTGAAATGGATGGGTTTGAGCAGAATGAGGGAATAATATTAATGGCTGCAACAAACTTGCCTGATATTCTTGATCCAGCTCTAACGAGACCTGGTAGATTTGATCGACATATTGTTGTACCAAATCCAGATGTACGTGGTCGGCAAGAAATATTGGAACTCTACCTGCATGATAAACCTACAGCCGATAATGTAGATATTAAAGCAATAGCCCGTGGTACCCCAGGATTCAATGGGGCAGATCTGGCAAACCTGGTGAACATTGCTGCTATTAAAGCTGCGGTTGAAGGTGCAGAGAAATTAACAGCTTCTCAGTTGGAGTTTGCAAAAGACCGAATAATTATGGGTACAGAGCGAAAAACAATGTTTGTATCGGAGGAGTCAAAAAAGCTTACTGCTTATCATGAGAGCGGCCATGCAATTGTTGCCCTTAATACCGACGGTGCACATCCAATTCACAAGGCAACAATCATGCCCCGTGGATCTGCTTTAGGAATGGTTACTCAGCTTCCCTCAAATGATGAGACATCAATAAGTAAGAAGCAGTTGTTAGCTCGTCTTGATGTTTGTATGGGAGGACGAGTTGCAGAAGAACTTATCTTTGGTCGGGATAATGTCACAACTGGAGCTAGTAGTGATCTTCAATCAGCTACCGAGCTTGCGCAATACATGGTTGTTAAACTCCTTAGAGATGCATATGATCGTGTGAAAGCTCTTCTGAAAAAGCATGAGAAGGCATTACATACGCTTGCAAATGCATTATTAGAGTGTGAGACACTTAGTGCAGAAGAAATCAGACGATTACTTCTCCCGTATCGGGAAGGAAAACTTCCAGAACAACAGGAACAAGAAGAAGCAGAAGGGGATCTTGTATTGGCGTAA
Protein sequence

>Msa0009800

MATLQASLLSKPLLFPFLIPNPSTLLKPHHFNPTRLHPRVPFTPLLCTFQPDTTLPHSEPNPEPISDDSPNLEPLNSTENDSVTILDSNSSNESNSRFESVMKRRAKEGLKRAFSELVDWWPFWRQEKKLAKLITEADANRLDAAKQTALFVELNKHSPESVIKIFEERDRAVDSRGVAEYLRALVVTNAIAEYLPDEESGKPSGIPSLLQELKQRASGNIDETFLNPGISEKQPLHVVMVDQKVSNKSRFAQELISTILFTVAVGLVWFMGAAALQKYIGSLGGIGSSGVGSSSSYTPKELNKEVMPEKNVKTFKDVKGCDDAKQELEEVVEYLKNPAKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLHDKPTADNVDIKAIARGTPGFNGADLANLVNIAAIKAAVEGAEKLTASQLEFAKDRIIMGTERKTMFVSEESKKLTAYHESGHAIVALNTDGAHPIHKATIMPRGSALGMVTQLPSNDETSISKKQLLARLDVCMGGRVAEELIFGRDNVTTGASSDLQSATELAQYMVVKLLRDAYDRVKALLKKHEKALHTLANALLECETLSAEEIRRLLLPYREGKLPEQQEQEEAEGDLVLA*